./htslib-1.2.1_nocomp.tar.gz ./encode1159/samples.tsv.pkl ./encode1159/junctions_uncompressed.bgz.tbi ./encode1159/lucene_full_standard ./encode1159/genes.sqlite ./encode1159/refseq_transcripts_by_hgvs.tsv.pkl ./encode1159/gene_expression.tsv.bgz ./encode1159/junctions.bgz ./encode1159/genes.bgz.tbi ./encode1159/junctions.sqlite ./encode1159/junctions.bgz.tbi ./encode1159/ucsc_known_canonical_transcript.tsv.pkl ./encode1159/refseq_transcripts_by_hgvs.tsv ./encode1159/genes.bgz ./encode1159/refseq_gencode.pkl ./encode1159/junctions_uncompressed.bgz ./encode1159/gencode.v25.annotation.gff3.gz ./encode1159/sample2junction.sqlite ./encode1159/ucsc_known_canonical_transcript.tsv ./encode1159/samples.fields.tsv ./encode1159/samples.tsv ./encode1159/lucene_full_ws ./encode1159/lucene_indexed_numeric_types.tsv ./gene_annotation_hg38/refseq_transcripts_by_hgvs.tsv ./gene_annotation_hg38/all_transcripts.gtf.bgz.tbi ./gene_annotation_hg38/gencode.v25.annotation.gff3.gz ./gene_annotation_hg38/ucsc_known_canonical_transcript.tsv ./gene_annotation_hg38/gencodev25_recount_genes.tsv.gz ./gene_annotation_hg38/gencodev25_recount_exons.tsv.gz ./gene_annotation_hg38/transcripts.sqlite ./gene_annotation_hg38/all_transcripts.gtf.bgz ./abmv1a/gencode.vM15.basic.annotation.gff3.gz ./abmv1a/samples.tsv.pkl ./abmv1a/junctions_uncompressed.bgz.tbi ./abmv1a/lucene_full_standard/_0.cfs ./abmv1a/lucene_full_standard/_0.cfe ./abmv1a/lucene_full_standard/_0.si ./abmv1a/lucene_full_standard/segments_1 ./abmv1a/lucene_full_standard/write.lock ./abmv1a/lucene_full_standard/segments.gen ./abmv1a/junctions.bgz ./abmv1a/junctions.sqlite ./abmv1a/junctions.bgz.tbi ./abmv1a/refseq_transcripts_by_hgvs.tsv ./abmv1a/junctions_uncompressed.bgz ./abmv1a/ucsc_known_canonical_transcript.tsv ./abmv1a/samples.fields.tsv ./abmv1a/samples.tsv ./abmv1a/lucene_full_ws/_0.cfs ./abmv1a/lucene_full_ws/_0.cfe ./abmv1a/lucene_full_ws/_0.si ./abmv1a/lucene_full_ws/segments_1 ./abmv1a/lucene_full_ws/write.lock ./abmv1a/lucene_full_ws/segments.gen ./abmv1a/lucene_indexed_numeric_types.tsv ./bigwigs ./gene_annotation_hg19/refseq_transcripts_by_hgvs.tsv ./gene_annotation_hg19/all_transcripts.gtf.bgz.tbi ./gene_annotation_hg19/ucsc_known_canonical_transcript.tsv ./gene_annotation_hg19/transcripts.sqlite ./gene_annotation_hg19/all_transcripts.gtf.bgz ./create_data_links.sh ./abmv1b/gencode.vM15.basic.annotation.gff3.gz ./abmv1b/samples.tsv.pkl ./abmv1b/junctions_uncompressed.bgz.tbi ./abmv1b/lucene_full_standard/_0.cfs ./abmv1b/lucene_full_standard/_0.cfe ./abmv1b/lucene_full_standard/_0.si ./abmv1b/lucene_full_standard/segments_1 ./abmv1b/lucene_full_standard/write.lock ./abmv1b/lucene_full_standard/segments.gen ./abmv1b/samples.tsv.inferred ./abmv1b/junctions.bgz ./abmv1b/.junctions2a.tsv.GHqBHS ./abmv1b/junctions.sqlite ./abmv1b/junctions.bgz.tbi ./abmv1b/refseq_transcripts_by_hgvs.tsv ./abmv1b/junctions_uncompressed.bgz ./abmv1b/ucsc_known_canonical_transcript.tsv ./abmv1b/samples.fields.tsv ./abmv1b/samples.tsv ./abmv1b/lucene_full_ws/_0.cfs ./abmv1b/lucene_full_ws/_0.cfe ./abmv1b/lucene_full_ws/_0.si ./abmv1b/lucene_full_ws/segments_1 ./abmv1b/lucene_full_ws/write.lock ./abmv1b/lucene_full_ws/segments.gen ./abmv1b/lucene.indexer.run ./abmv1b/lucene_indexed_numeric_types.tsv ./srav1/samples.tsv.type_inference ./srav1/samples.tsv.pkl ./srav1/junctions_uncompressed.bgz.tbi ./srav1/lucene_full_standard/_e.cfs ./srav1/lucene_full_standard/_c.nvm ./srav1/lucene_full_standard/_c.si ./srav1/lucene_full_standard/_d.cfs ./srav1/lucene_full_standard/_c_Lucene41_0.tim ./srav1/lucene_full_standard/_6.cfs ./srav1/lucene_full_standard/_d.si ./srav1/lucene_full_standard/_7.si ./srav1/lucene_full_standard/_f.si ./srav1/lucene_full_standard/_c_Lucene41_0.tip ./srav1/lucene_full_standard/_e.si ./srav1/lucene_full_standard/_c.fdt ./srav1/lucene_full_standard/_c_Lucene41_0.pos ./srav1/lucene_full_standard/_d.cfe ./srav1/lucene_full_standard/segments_1 ./srav1/lucene_full_standard/_6.cfe ./srav1/lucene_full_standard/write.lock ./srav1/lucene_full_standard/_c.fdx ./srav1/lucene_full_standard/_6.si ./srav1/lucene_full_standard/_c.nvd ./srav1/lucene_full_standard/_7.cfs ./srav1/lucene_full_standard/_e.cfe ./srav1/lucene_full_standard/segments.gen ./srav1/lucene_full_standard/_f.cfs ./srav1/lucene_full_standard/_7.cfe ./srav1/lucene_full_standard/_c_Lucene41_0.doc ./srav1/lucene_full_standard/_f.cfe ./srav1/lucene_full_standard/_c.fnm ./srav1/refseq_transcripts_by_hgvs.tsv.pkl ./srav1/junctions_ahoc.sqlite ./srav1/junctions.bgz ./srav1/junctions.sqlite ./srav1/junctions.bgz.tbi ./srav1/ucsc_known_canonical_transcript.tsv.pkl ./srav1/refseq_transcripts_by_hgvs.tsv ./srav1/all_transcripts.gtf.bgz.tbi ./srav1/junctions_uncompressed.bgz ./srav1/sample2junction.sqlite ./srav1/ucsc_known_canonical_transcript.tsv ./srav1/samples.fields.tsv ./srav1/junctions.header.tsv ./srav1/samples.tsv ./srav1/lucene_full_ws/_e.cfs ./srav1/lucene_full_ws/_c.nvm ./srav1/lucene_full_ws/_c.si ./srav1/lucene_full_ws/_d.cfs ./srav1/lucene_full_ws/_c_Lucene41_0.tim ./srav1/lucene_full_ws/_6.cfs ./srav1/lucene_full_ws/_d.si ./srav1/lucene_full_ws/_g.si ./srav1/lucene_full_ws/_7.si ./srav1/lucene_full_ws/_f.si ./srav1/lucene_full_ws/_g.cfs ./srav1/lucene_full_ws/_c_Lucene41_0.tip ./srav1/lucene_full_ws/_e.si ./srav1/lucene_full_ws/_c.fdt ./srav1/lucene_full_ws/_g.cfe ./srav1/lucene_full_ws/_c_Lucene41_0.pos ./srav1/lucene_full_ws/_d.cfe ./srav1/lucene_full_ws/segments_1 ./srav1/lucene_full_ws/_6.cfe ./srav1/lucene_full_ws/write.lock ./srav1/lucene_full_ws/_c.fdx ./srav1/lucene_full_ws/_6.si ./srav1/lucene_full_ws/_c.nvd ./srav1/lucene_full_ws/_7.cfs ./srav1/lucene_full_ws/_e.cfe ./srav1/lucene_full_ws/segments.gen ./srav1/lucene_full_ws/_f.cfs ./srav1/lucene_full_ws/_7.cfe ./srav1/lucene_full_ws/_c_Lucene41_0.doc ./srav1/lucene_full_ws/_f.cfe ./srav1/lucene_full_ws/_c.fnm ./srav1/transcripts.sqlite ./srav1/lucene_indexed_numeric_types.tsv ./srav1/all_transcripts.gtf.bgz ./tcga/samples.tsv.pkl ./tcga/samples.groups.tsv.pkl ./tcga/junctions_uncompressed.bgz.tbi ./tcga/lucene_full_standard/_m.nvd ./tcga/lucene_full_standard/_m_Lucene41_0.tim ./tcga/lucene_full_standard/_1t.si ./tcga/lucene_full_standard/_18.fdx ./tcga/lucene_full_standard/_1t_Lucene41_0.pos ./tcga/lucene_full_standard/_c.nvm ./tcga/lucene_full_standard/_1t_Lucene41_0.tip ./tcga/lucene_full_standard/_c.si ./tcga/lucene_full_standard/_x_Lucene41_0.tim ./tcga/lucene_full_standard/_26.cfe ./tcga/lucene_full_standard/_x.fdt ./tcga/lucene_full_standard/_c_Lucene41_0.tim ./tcga/lucene_full_standard/_1j.si ./tcga/lucene_full_standard/_24_Lucene41_0.pos ./tcga/lucene_full_standard/_25.cfs ./tcga/lucene_full_standard/_1t_Lucene41_0.doc ./tcga/lucene_full_standard/_x.nvm ./tcga/lucene_full_standard/_18_Lucene41_0.tim ./tcga/lucene_full_standard/_x.si ./tcga/lucene_full_standard/_m.si ./tcga/lucene_full_standard/_1t.fnm ./tcga/lucene_full_standard/_18.nvm ./tcga/lucene_full_standard/_x.fdx ./tcga/lucene_full_standard/_1j.fnm ./tcga/lucene_full_standard/_c_Lucene41_0.tip ./tcga/lucene_full_standard/_x_Lucene41_0.tip ./tcga/lucene_full_standard/_c.fdt ./tcga/lucene_full_standard/_m.fdt ./tcga/lucene_full_standard/_m_Lucene41_0.tip ./tcga/lucene_full_standard/_25.si ./tcga/lucene_full_standard/_m_Lucene41_0.doc ./tcga/lucene_full_standard/_24_Lucene41_0.doc ./tcga/lucene_full_standard/_1j_Lucene41_0.doc ./tcga/lucene_full_standard/_1j.nvd ./tcga/lucene_full_standard/_1t_Lucene41_0.tim ./tcga/lucene_full_standard/_1j_Lucene41_0.tip ./tcga/lucene_full_standard/_c_Lucene41_0.pos ./tcga/lucene_full_standard/_1t.nvd ./tcga/lucene_full_standard/_18_Lucene41_0.doc ./tcga/lucene_full_standard/_x.fnm ./tcga/lucene_full_standard/_m_Lucene41_0.pos ./tcga/lucene_full_standard/_1j.fdx ./tcga/lucene_full_standard/segments_1 ./tcga/lucene_full_standard/_24.fnm ./tcga/lucene_full_standard/_28.cfs ./tcga/lucene_full_standard/_1j_Lucene41_0.tim ./tcga/lucene_full_standard/_1t.nvm ./tcga/lucene_full_standard/write.lock ./tcga/lucene_full_standard/_m.nvm ./tcga/lucene_full_standard/_1j.fdt ./tcga/lucene_full_standard/_c.fdx ./tcga/lucene_full_standard/_24.nvm ./tcga/lucene_full_standard/_1t.fdt ./tcga/lucene_full_standard/_26.cfs ./tcga/lucene_full_standard/_x_Lucene41_0.doc ./tcga/lucene_full_standard/_1j.nvm ./tcga/lucene_full_standard/_24_Lucene41_0.tim ./tcga/lucene_full_standard/_24.si ./tcga/lucene_full_standard/_c.nvd ./tcga/lucene_full_standard/_24.fdx ./tcga/lucene_full_standard/_18.si ./tcga/lucene_full_standard/_1j_Lucene41_0.pos ./tcga/lucene_full_standard/_24.nvd ./tcga/lucene_full_standard/_m.fdx ./tcga/lucene_full_standard/_18.nvd ./tcga/lucene_full_standard/segments.gen ./tcga/lucene_full_standard/_28.cfe ./tcga/lucene_full_standard/_24.fdt ./tcga/lucene_full_standard/_x_Lucene41_0.pos ./tcga/lucene_full_standard/_27.si ./tcga/lucene_full_standard/_18_Lucene41_0.tip ./tcga/lucene_full_standard/_28.si ./tcga/lucene_full_standard/_c_Lucene41_0.doc ./tcga/lucene_full_standard/_26.si ./tcga/lucene_full_standard/_18.fnm ./tcga/lucene_full_standard/_24_Lucene41_0.tip ./tcga/lucene_full_standard/_27.cfe ./tcga/lucene_full_standard/_x.nvd ./tcga/lucene_full_standard/_1t.fdx ./tcga/lucene_full_standard/_c.fnm ./tcga/lucene_full_standard/_25.cfe ./tcga/lucene_full_standard/_m.fnm ./tcga/lucene_full_standard/_18.fdt ./tcga/lucene_full_standard/_18_Lucene41_0.pos ./tcga/lucene_full_standard/_27.cfs ./tcga/genes.sqlite ./tcga/refseq_transcripts_by_hgvs.tsv.pkl ./tcga/t1.cancer_type_fields ./tcga/junctions.bgz ./tcga/genes.bgz.tbi ./tcga/.lucene.indexer.run.E6VadS ./tcga/junctions.sqlite ./tcga/junctions.bgz.tbi ./tcga/ucsc_known_canonical_transcript.tsv.pkl ./tcga/refseq_transcripts_by_hgvs.tsv ./tcga/all_transcripts.gtf.bgz.tbi ./tcga/genes.bgz ./tcga/refseq_gencode.pkl ./tcga/junctions_uncompressed.bgz ./tcga/gencode.v25.annotation.gff3.gz ./tcga/sample2junction.sqlite ./tcga/ucsc_known_canonical_transcript.tsv ./tcga/samples.fields.tsv ./tcga/junctions.header.tsv ./tcga/samples.tsv ./tcga/lucene_full_ws/_m.nvd ./tcga/lucene_full_ws/_m_Lucene41_0.tim ./tcga/lucene_full_ws/_18.fdx ./tcga/lucene_full_ws/_1i_Lucene41_0.pos ./tcga/lucene_full_ws/_c.nvm ./tcga/lucene_full_ws/_1l.cfs ./tcga/lucene_full_ws/_c.si ./tcga/lucene_full_ws/_x_Lucene41_0.tim ./tcga/lucene_full_ws/_1j.cfe ./tcga/lucene_full_ws/_x.fdt ./tcga/lucene_full_ws/_c_Lucene41_0.tim ./tcga/lucene_full_ws/_1i_Lucene41_0.doc ./tcga/lucene_full_ws/_1j.si ./tcga/lucene_full_ws/_x.nvm ./tcga/lucene_full_ws/_18_Lucene41_0.tim ./tcga/lucene_full_ws/_x.si ./tcga/lucene_full_ws/_m.si ./tcga/lucene_full_ws/_1k.cfe ./tcga/lucene_full_ws/_1m.cfe ./tcga/lucene_full_ws/_18.nvm ./tcga/lucene_full_ws/_x.fdx ./tcga/lucene_full_ws/_1n.si ./tcga/lucene_full_ws/_c_Lucene41_0.tip ./tcga/lucene_full_ws/_x_Lucene41_0.tip ./tcga/lucene_full_ws/_1i_Lucene41_0.tim ./tcga/lucene_full_ws/_c.fdt ./tcga/lucene_full_ws/_1i.si ./tcga/lucene_full_ws/_m.fdt ./tcga/lucene_full_ws/_m_Lucene41_0.tip ./tcga/lucene_full_ws/_m_Lucene41_0.doc ./tcga/lucene_full_ws/_1l.si ./tcga/lucene_full_ws/_1n.cfe ./tcga/lucene_full_ws/_1n.cfs ./tcga/lucene_full_ws/_c_Lucene41_0.pos ./tcga/lucene_full_ws/_1k.cfs ./tcga/lucene_full_ws/_18_Lucene41_0.doc ./tcga/lucene_full_ws/_1i.fdx ./tcga/lucene_full_ws/_x.fnm ./tcga/lucene_full_ws/_m_Lucene41_0.pos ./tcga/lucene_full_ws/_1k.si ./tcga/lucene_full_ws/_1i.fnm ./tcga/lucene_full_ws/segments_1 ./tcga/lucene_full_ws/write.lock ./tcga/lucene_full_ws/_m.nvm ./tcga/lucene_full_ws/_1l.cfe ./tcga/lucene_full_ws/_c.fdx ./tcga/lucene_full_ws/_1m.cfs ./tcga/lucene_full_ws/_x_Lucene41_0.doc ./tcga/lucene_full_ws/_1m.si ./tcga/lucene_full_ws/_c.nvd ./tcga/lucene_full_ws/_1j.cfs ./tcga/lucene_full_ws/_1i.fdt ./tcga/lucene_full_ws/_18.si ./tcga/lucene_full_ws/_1i.nvm ./tcga/lucene_full_ws/_m.fdx ./tcga/lucene_full_ws/_18.nvd ./tcga/lucene_full_ws/segments.gen ./tcga/lucene_full_ws/_x_Lucene41_0.pos ./tcga/lucene_full_ws/_18_Lucene41_0.tip ./tcga/lucene_full_ws/_c_Lucene41_0.doc ./tcga/lucene_full_ws/_18.fnm ./tcga/lucene_full_ws/_x.nvd ./tcga/lucene_full_ws/_c.fnm ./tcga/lucene_full_ws/_1i.nvd ./tcga/lucene_full_ws/_m.fnm ./tcga/lucene_full_ws/_18.fdt ./tcga/lucene_full_ws/_18_Lucene41_0.pos ./tcga/lucene_full_ws/_1i_Lucene41_0.tip ./tcga/transcripts.sqlite ./tcga/lucene_indexed_numeric_types.tsv ./tcga/all_transcripts.gtf.bgz ./tcga/samples.groups.tsv ./supermouse/gencode.vM15.basic.annotation.gff3.gz ./supermouse/samples.tsv.pkl ./supermouse/junctions_uncompressed.bgz.tbi ./supermouse/lucene_full_standard/_0.cfs ./supermouse/lucene_full_standard/_0.cfe ./supermouse/lucene_full_standard/_0.si ./supermouse/lucene_full_standard/segments_1 ./supermouse/lucene_full_standard/write.lock ./supermouse/lucene_full_standard/segments.gen ./supermouse/genes.sqlite ./supermouse/refseq_transcripts_by_hgvs.tsv.pkl ./supermouse/junctions.bgz ./supermouse/genes.bgz.tbi ./supermouse/gene_coverage.recount_normalized.rounded.tsv.gz ./supermouse/junctions.sqlite ./supermouse/junctions.bgz.tbi ./supermouse/ucsc_known_canonical_transcript.tsv.pkl ./supermouse/refseq_transcripts_by_hgvs.tsv ./supermouse/genes.bgz ./supermouse/junctions_uncompressed.bgz ./supermouse/sample2junction.sqlite ./supermouse/ucsc_known_canonical_transcript.tsv ./supermouse/samples.fields.tsv ./supermouse/samples.tsv ./supermouse/lucene_full_ws/_0.cfs ./supermouse/lucene_full_ws/_0.cfe ./supermouse/lucene_full_ws/_0.si ./supermouse/lucene_full_ws/segments_1 ./supermouse/lucene_full_ws/write.lock ./supermouse/lucene_full_ws/segments.gen ./supermouse/lucene_indexed_numeric_types.tsv ./supermouse/gene_coverage.tsv.gz ./supermouse/sample_summary_stats.tsv ./gtex/samples.tsv.pkl ./gtex/junctions_uncompressed.bgz.tbi ./gtex/lucene_full_standard/_m.nvd ./gtex/lucene_full_standard/_m_Lucene41_0.tim ./gtex/lucene_full_standard/_1t.si ./gtex/lucene_full_standard/_18.fdx ./gtex/lucene_full_standard/_1t_Lucene41_0.pos ./gtex/lucene_full_standard/_c.nvm ./gtex/lucene_full_standard/_1t_Lucene41_0.tip ./gtex/lucene_full_standard/_c.si ./gtex/lucene_full_standard/_x_Lucene41_0.tim ./gtex/lucene_full_standard/_26.cfe ./gtex/lucene_full_standard/_x.fdt ./gtex/lucene_full_standard/_c_Lucene41_0.tim ./gtex/lucene_full_standard/_1j.si ./gtex/lucene_full_standard/_24_Lucene41_0.pos ./gtex/lucene_full_standard/_25.cfs ./gtex/lucene_full_standard/_1t_Lucene41_0.doc ./gtex/lucene_full_standard/_x.nvm ./gtex/lucene_full_standard/_18_Lucene41_0.tim ./gtex/lucene_full_standard/_x.si ./gtex/lucene_full_standard/_m.si ./gtex/lucene_full_standard/_1t.fnm ./gtex/lucene_full_standard/_18.nvm ./gtex/lucene_full_standard/_x.fdx ./gtex/lucene_full_standard/_1j.fnm ./gtex/lucene_full_standard/_c_Lucene41_0.tip ./gtex/lucene_full_standard/_x_Lucene41_0.tip ./gtex/lucene_full_standard/_c.fdt ./gtex/lucene_full_standard/_m.fdt ./gtex/lucene_full_standard/_m_Lucene41_0.tip ./gtex/lucene_full_standard/_25.si ./gtex/lucene_full_standard/_m_Lucene41_0.doc ./gtex/lucene_full_standard/_24_Lucene41_0.doc ./gtex/lucene_full_standard/_1j_Lucene41_0.doc ./gtex/lucene_full_standard/_1j.nvd ./gtex/lucene_full_standard/_1t_Lucene41_0.tim ./gtex/lucene_full_standard/_1j_Lucene41_0.tip ./gtex/lucene_full_standard/_c_Lucene41_0.pos ./gtex/lucene_full_standard/_1t.nvd ./gtex/lucene_full_standard/_18_Lucene41_0.doc ./gtex/lucene_full_standard/_x.fnm ./gtex/lucene_full_standard/_m_Lucene41_0.pos ./gtex/lucene_full_standard/_1j.fdx ./gtex/lucene_full_standard/segments_1 ./gtex/lucene_full_standard/_24.fnm ./gtex/lucene_full_standard/_28.cfs ./gtex/lucene_full_standard/_1j_Lucene41_0.tim ./gtex/lucene_full_standard/_1t.nvm ./gtex/lucene_full_standard/write.lock ./gtex/lucene_full_standard/_m.nvm ./gtex/lucene_full_standard/_1j.fdt ./gtex/lucene_full_standard/_c.fdx ./gtex/lucene_full_standard/_24.nvm ./gtex/lucene_full_standard/_1t.fdt ./gtex/lucene_full_standard/_26.cfs ./gtex/lucene_full_standard/_x_Lucene41_0.doc ./gtex/lucene_full_standard/_1j.nvm ./gtex/lucene_full_standard/_24_Lucene41_0.tim ./gtex/lucene_full_standard/_24.si ./gtex/lucene_full_standard/_c.nvd ./gtex/lucene_full_standard/_24.fdx ./gtex/lucene_full_standard/_18.si ./gtex/lucene_full_standard/_1j_Lucene41_0.pos ./gtex/lucene_full_standard/_24.nvd ./gtex/lucene_full_standard/_m.fdx ./gtex/lucene_full_standard/_18.nvd ./gtex/lucene_full_standard/segments.gen ./gtex/lucene_full_standard/_28.cfe ./gtex/lucene_full_standard/_24.fdt ./gtex/lucene_full_standard/_x_Lucene41_0.pos ./gtex/lucene_full_standard/_27.si ./gtex/lucene_full_standard/_18_Lucene41_0.tip ./gtex/lucene_full_standard/_28.si ./gtex/lucene_full_standard/_c_Lucene41_0.doc ./gtex/lucene_full_standard/_26.si ./gtex/lucene_full_standard/_18.fnm ./gtex/lucene_full_standard/_24_Lucene41_0.tip ./gtex/lucene_full_standard/_27.cfe ./gtex/lucene_full_standard/_x.nvd ./gtex/lucene_full_standard/_1t.fdx ./gtex/lucene_full_standard/_c.fnm ./gtex/lucene_full_standard/_25.cfe ./gtex/lucene_full_standard/_m.fnm ./gtex/lucene_full_standard/_18.fdt ./gtex/lucene_full_standard/_18_Lucene41_0.pos ./gtex/lucene_full_standard/_27.cfs ./gtex/genes.sqlite ./gtex/refseq_transcripts_by_hgvs.tsv.pkl ./gtex/junctions.bgz ./gtex/genes.bgz.tbi ./gtex/junctions.sqlite ./gtex/junctions.bgz.tbi ./gtex/ucsc_known_canonical_transcript.tsv.pkl ./gtex/refseq_transcripts_by_hgvs.tsv ./gtex/all_transcripts.gtf.bgz.tbi ./gtex/genes.bgz ./gtex/refseq_gencode.pkl ./gtex/junctions_uncompressed.bgz ./gtex/samples.fields.gtex_auth.tsv ./gtex/gencode.v25.annotation.gff3.gz ./gtex/sample2junction.sqlite ./gtex/ucsc_known_canonical_transcript.tsv ./gtex/samples.fields.tsv ./gtex/t1 ./gtex/counts_gene.tsv.gz ./gtex/junctions.header.tsv ./gtex/samples.tsv ./gtex/lucene_full_ws/_m.nvd ./gtex/lucene_full_ws/_m_Lucene41_0.tim ./gtex/lucene_full_ws/_1t.si ./gtex/lucene_full_ws/_18.fdx ./gtex/lucene_full_ws/_1t_Lucene41_0.pos ./gtex/lucene_full_ws/_c.nvm ./gtex/lucene_full_ws/_1t_Lucene41_0.tip ./gtex/lucene_full_ws/_c.si ./gtex/lucene_full_ws/_x_Lucene41_0.tim ./gtex/lucene_full_ws/_26.cfe ./gtex/lucene_full_ws/_x.fdt ./gtex/lucene_full_ws/_c_Lucene41_0.tim ./gtex/lucene_full_ws/_1j.si ./gtex/lucene_full_ws/_24_Lucene41_0.pos ./gtex/lucene_full_ws/_25.cfs ./gtex/lucene_full_ws/_1t_Lucene41_0.doc ./gtex/lucene_full_ws/_x.nvm ./gtex/lucene_full_ws/_18_Lucene41_0.tim ./gtex/lucene_full_ws/_x.si ./gtex/lucene_full_ws/_m.si ./gtex/lucene_full_ws/_1t.fnm ./gtex/lucene_full_ws/_18.nvm ./gtex/lucene_full_ws/_x.fdx ./gtex/lucene_full_ws/_1j.fnm ./gtex/lucene_full_ws/_c_Lucene41_0.tip ./gtex/lucene_full_ws/_x_Lucene41_0.tip ./gtex/lucene_full_ws/_c.fdt ./gtex/lucene_full_ws/_m.fdt ./gtex/lucene_full_ws/_m_Lucene41_0.tip ./gtex/lucene_full_ws/_25.si ./gtex/lucene_full_ws/_m_Lucene41_0.doc ./gtex/lucene_full_ws/_24_Lucene41_0.doc ./gtex/lucene_full_ws/_1j_Lucene41_0.doc ./gtex/lucene_full_ws/_1j.nvd ./gtex/lucene_full_ws/_1t_Lucene41_0.tim ./gtex/lucene_full_ws/_1j_Lucene41_0.tip ./gtex/lucene_full_ws/_c_Lucene41_0.pos ./gtex/lucene_full_ws/_1t.nvd ./gtex/lucene_full_ws/_18_Lucene41_0.doc ./gtex/lucene_full_ws/_x.fnm ./gtex/lucene_full_ws/_m_Lucene41_0.pos ./gtex/lucene_full_ws/_1j.fdx ./gtex/lucene_full_ws/segments_1 ./gtex/lucene_full_ws/_24.fnm ./gtex/lucene_full_ws/_28.cfs ./gtex/lucene_full_ws/_1j_Lucene41_0.tim ./gtex/lucene_full_ws/_1t.nvm ./gtex/lucene_full_ws/write.lock ./gtex/lucene_full_ws/_m.nvm ./gtex/lucene_full_ws/_1j.fdt ./gtex/lucene_full_ws/_c.fdx ./gtex/lucene_full_ws/_24.nvm ./gtex/lucene_full_ws/_1t.fdt ./gtex/lucene_full_ws/_26.cfs ./gtex/lucene_full_ws/_x_Lucene41_0.doc ./gtex/lucene_full_ws/_1j.nvm ./gtex/lucene_full_ws/_24_Lucene41_0.tim ./gtex/lucene_full_ws/_24.si ./gtex/lucene_full_ws/_c.nvd ./gtex/lucene_full_ws/_24.fdx ./gtex/lucene_full_ws/_18.si ./gtex/lucene_full_ws/_1j_Lucene41_0.pos ./gtex/lucene_full_ws/_24.nvd ./gtex/lucene_full_ws/_m.fdx ./gtex/lucene_full_ws/_18.nvd ./gtex/lucene_full_ws/segments.gen ./gtex/lucene_full_ws/_28.cfe ./gtex/lucene_full_ws/_24.fdt ./gtex/lucene_full_ws/_x_Lucene41_0.pos ./gtex/lucene_full_ws/_27.si ./gtex/lucene_full_ws/_18_Lucene41_0.tip ./gtex/lucene_full_ws/_28.si ./gtex/lucene_full_ws/_c_Lucene41_0.doc ./gtex/lucene_full_ws/_26.si ./gtex/lucene_full_ws/_18.fnm ./gtex/lucene_full_ws/_24_Lucene41_0.tip ./gtex/lucene_full_ws/_27.cfe ./gtex/lucene_full_ws/_x.nvd ./gtex/lucene_full_ws/_1t.fdx ./gtex/lucene_full_ws/_c.fnm ./gtex/lucene_full_ws/_25.cfe ./gtex/lucene_full_ws/_m.fnm ./gtex/lucene_full_ws/_18.fdt ./gtex/lucene_full_ws/_18_Lucene41_0.pos ./gtex/lucene_full_ws/_27.cfs ./gtex/transcripts.sqlite ./gtex/lucene_indexed_numeric_types.tsv ./gtex/all_transcripts.gtf.bgz ./gtex/samples.groups.tsv ./mouseling/samples.tsv.pkl ./mouseling/junctions_uncompressed.bgz.tbi ./mouseling/lucene_full_standard/_0.cfs ./mouseling/lucene_full_standard/_0.cfe ./mouseling/lucene_full_standard/_0.si ./mouseling/lucene_full_standard/segments_1 ./mouseling/lucene_full_standard/write.lock ./mouseling/lucene_full_standard/segments.gen ./mouseling/refseq_transcripts_by_hgvs.tsv.pkl ./mouseling/junctions.bgz ./mouseling/junctions.sqlite ./mouseling/junctions.bgz.tbi ./mouseling/ucsc_known_canonical_transcript.tsv.pkl ./mouseling/refseq_transcripts_by_hgvs.tsv ./mouseling/junctions_uncompressed.bgz ./mouseling/sample2junction.sqlite ./mouseling/ucsc_known_canonical_transcript.tsv ./mouseling/samples.tsv ./mouseling/lucene_full_ws/_0.cfs ./mouseling/lucene_full_ws/_0.cfe ./mouseling/lucene_full_ws/_0.si ./mouseling/lucene_full_ws/segments_1 ./mouseling/lucene_full_ws/write.lock ./mouseling/lucene_full_ws/segments.gen ./mouseling/lucene_indexed_numeric_types.tsv ./README ./srav2/samples.tsv.pkl ./srav2/samples.groups.tsv.pkl ./srav2/junctions_uncompressed.bgz.tbi ./srav2/lucene_full_standard/_m.nvd ./srav2/lucene_full_standard/_m_Lucene41_0.tim ./srav2/lucene_full_standard/_1v.cfs ./srav2/lucene_full_standard/_18.fdx ./srav2/lucene_full_standard/_c.nvm ./srav2/lucene_full_standard/_1x.cfs ./srav2/lucene_full_standard/_1a.cfe ./srav2/lucene_full_standard/_c.si ./srav2/lucene_full_standard/_1a.cfs ./srav2/lucene_full_standard/_x_Lucene41_0.tim ./srav2/lucene_full_standard/_x.fdt ./srav2/lucene_full_standard/_c_Lucene41_0.tim ./srav2/lucene_full_standard/_1x.cfe ./srav2/lucene_full_standard/_1j.si ./srav2/lucene_full_standard/_1y.cfs ./srav2/lucene_full_standard/_x.nvm ./srav2/lucene_full_standard/_18_Lucene41_0.tim ./srav2/lucene_full_standard/_x.si ./srav2/lucene_full_standard/_1u.si ./srav2/lucene_full_standard/_m.si ./srav2/lucene_full_standard/_1z.cfe ./srav2/lucene_full_standard/_18.nvm ./srav2/lucene_full_standard/_1u_Lucene41_0.pos ./srav2/lucene_full_standard/_x.fdx ./srav2/lucene_full_standard/_1j.fnm ./srav2/lucene_full_standard/_1y.si ./srav2/lucene_full_standard/_c_Lucene41_0.tip ./srav2/lucene_full_standard/_1u.nvd ./srav2/lucene_full_standard/_x_Lucene41_0.tip ./srav2/lucene_full_standard/_1z.cfs ./srav2/lucene_full_standard/_c.fdt ./srav2/lucene_full_standard/_m.fdt ./srav2/lucene_full_standard/_m_Lucene41_0.tip ./srav2/lucene_full_standard/_m_Lucene41_0.doc ./srav2/lucene_full_standard/_1j_Lucene41_0.doc ./srav2/lucene_full_standard/_1j.nvd ./srav2/lucene_full_standard/_1v.cfe ./srav2/lucene_full_standard/_1j_Lucene41_0.tip ./srav2/lucene_full_standard/_1u.fdx ./srav2/lucene_full_standard/_c_Lucene41_0.pos ./srav2/lucene_full_standard/_18_Lucene41_0.doc ./srav2/lucene_full_standard/_x.fnm ./srav2/lucene_full_standard/_m_Lucene41_0.pos ./srav2/lucene_full_standard/_1j.fdx ./srav2/lucene_full_standard/segments_1 ./srav2/lucene_full_standard/_1z.si ./srav2/lucene_full_standard/_1w.cfe ./srav2/lucene_full_standard/_1j_Lucene41_0.tim ./srav2/lucene_full_standard/write.lock ./srav2/lucene_full_standard/_m.nvm ./srav2/lucene_full_standard/_1j.fdt ./srav2/lucene_full_standard/_c.fdx ./srav2/lucene_full_standard/_x_Lucene41_0.doc ./srav2/lucene_full_standard/_1j.nvm ./srav2/lucene_full_standard/_1v.si ./srav2/lucene_full_standard/_1u_Lucene41_0.doc ./srav2/lucene_full_standard/_c.nvd ./srav2/lucene_full_standard/_18.si ./srav2/lucene_full_standard/_1j_Lucene41_0.pos ./srav2/lucene_full_standard/_1w.cfs ./srav2/lucene_full_standard/_m.fdx ./srav2/lucene_full_standard/_18.nvd ./srav2/lucene_full_standard/segments.gen ./srav2/lucene_full_standard/_1u_Lucene41_0.tip ./srav2/lucene_full_standard/_x_Lucene41_0.pos ./srav2/lucene_full_standard/_1u.fdt ./srav2/lucene_full_standard/_1a.si ./srav2/lucene_full_standard/_20.cfs ./srav2/lucene_full_standard/_18_Lucene41_0.tip ./srav2/lucene_full_standard/_1u.fnm ./srav2/lucene_full_standard/_c_Lucene41_0.doc ./srav2/lucene_full_standard/_1w.si ./srav2/lucene_full_standard/_1u_Lucene41_0.tim ./srav2/lucene_full_standard/_20.cfe ./srav2/lucene_full_standard/_18.fnm ./srav2/lucene_full_standard/_1x.si ./srav2/lucene_full_standard/_x.nvd ./srav2/lucene_full_standard/_1y.cfe ./srav2/lucene_full_standard/_c.fnm ./srav2/lucene_full_standard/_m.fnm ./srav2/lucene_full_standard/_18.fdt ./srav2/lucene_full_standard/_18_Lucene41_0.pos ./srav2/lucene_full_standard/_20.si ./srav2/lucene_full_standard/_1u.nvm ./srav2/genes.sqlite ./srav2/refseq_transcripts_by_hgvs.tsv.pkl ./srav2/junctions.bgz.avg_samples_per_junction ./srav2/junctions.bgz ./srav2/genes.bgz.tbi ./srav2/junctions.sqlite ./srav2/junctions.bgz.tbi ./srav2/ucsc_known_canonical_transcript.tsv.pkl ./srav2/refseq_transcripts_by_hgvs.tsv ./srav2/all_transcripts.gtf.bgz.tbi ./srav2/genes.bgz ./srav2/refseq_gencode.pkl ./srav2/junctions_uncompressed.bgz ./srav2/gencode.v25.annotation.gff3.gz ./srav2/sample2junction.sqlite ./srav2/ucsc_known_canonical_transcript.tsv ./srav2/samples.fields.tsv ./srav2/junctions.sqlite.noindices ./srav2/junctions.header.tsv ./srav2/samples.tsv ./srav2/lucene_full_ws/_m.nvd ./srav2/lucene_full_ws/_m_Lucene41_0.tim ./srav2/lucene_full_ws/_18.fdx ./srav2/lucene_full_ws/_c.nvm ./srav2/lucene_full_ws/_c.si ./srav2/lucene_full_ws/_x_Lucene41_0.tim ./srav2/lucene_full_ws/_26.cfe ./srav2/lucene_full_ws/_x.fdt ./srav2/lucene_full_ws/_c_Lucene41_0.tim ./srav2/lucene_full_ws/_1j.si ./srav2/lucene_full_ws/_24_Lucene41_0.pos ./srav2/lucene_full_ws/_25.cfs ./srav2/lucene_full_ws/_x.nvm ./srav2/lucene_full_ws/_18_Lucene41_0.tim ./srav2/lucene_full_ws/_x.si ./srav2/lucene_full_ws/_1u.si ./srav2/lucene_full_ws/_m.si ./srav2/lucene_full_ws/_18.nvm ./srav2/lucene_full_ws/_1u_Lucene41_0.pos ./srav2/lucene_full_ws/_x.fdx ./srav2/lucene_full_ws/_1j.fnm ./srav2/lucene_full_ws/_c_Lucene41_0.tip ./srav2/lucene_full_ws/_1u.nvd ./srav2/lucene_full_ws/_x_Lucene41_0.tip ./srav2/lucene_full_ws/_c.fdt ./srav2/lucene_full_ws/_m.fdt ./srav2/lucene_full_ws/_m_Lucene41_0.tip ./srav2/lucene_full_ws/_25.si ./srav2/lucene_full_ws/_m_Lucene41_0.doc ./srav2/lucene_full_ws/_24_Lucene41_0.doc ./srav2/lucene_full_ws/_1j_Lucene41_0.doc ./srav2/lucene_full_ws/_1j.nvd ./srav2/lucene_full_ws/_1j_Lucene41_0.tip ./srav2/lucene_full_ws/_1u.fdx ./srav2/lucene_full_ws/_c_Lucene41_0.pos ./srav2/lucene_full_ws/_18_Lucene41_0.doc ./srav2/lucene_full_ws/_x.fnm ./srav2/lucene_full_ws/_m_Lucene41_0.pos ./srav2/lucene_full_ws/_1j.fdx ./srav2/lucene_full_ws/segments_1 ./srav2/lucene_full_ws/_24.fnm ./srav2/lucene_full_ws/_28.cfs ./srav2/lucene_full_ws/_1j_Lucene41_0.tim ./srav2/lucene_full_ws/write.lock ./srav2/lucene_full_ws/_m.nvm ./srav2/lucene_full_ws/_1j.fdt ./srav2/lucene_full_ws/_c.fdx ./srav2/lucene_full_ws/_24.nvm ./srav2/lucene_full_ws/_26.cfs ./srav2/lucene_full_ws/_x_Lucene41_0.doc ./srav2/lucene_full_ws/_1j.nvm ./srav2/lucene_full_ws/_24_Lucene41_0.tim ./srav2/lucene_full_ws/_1u_Lucene41_0.doc ./srav2/lucene_full_ws/_24.si ./srav2/lucene_full_ws/_c.nvd ./srav2/lucene_full_ws/_24.fdx ./srav2/lucene_full_ws/_18.si ./srav2/lucene_full_ws/_1j_Lucene41_0.pos ./srav2/lucene_full_ws/_24.nvd ./srav2/lucene_full_ws/_m.fdx ./srav2/lucene_full_ws/_18.nvd ./srav2/lucene_full_ws/segments.gen ./srav2/lucene_full_ws/_28.cfe ./srav2/lucene_full_ws/_1u_Lucene41_0.tip ./srav2/lucene_full_ws/_24.fdt ./srav2/lucene_full_ws/_x_Lucene41_0.pos ./srav2/lucene_full_ws/_27.si ./srav2/lucene_full_ws/_1u.fdt ./srav2/lucene_full_ws/_18_Lucene41_0.tip ./srav2/lucene_full_ws/_1u.fnm ./srav2/lucene_full_ws/_28.si ./srav2/lucene_full_ws/_c_Lucene41_0.doc ./srav2/lucene_full_ws/_1u_Lucene41_0.tim ./srav2/lucene_full_ws/_26.si ./srav2/lucene_full_ws/_18.fnm ./srav2/lucene_full_ws/_24_Lucene41_0.tip ./srav2/lucene_full_ws/_27.cfe ./srav2/lucene_full_ws/_x.nvd ./srav2/lucene_full_ws/_c.fnm ./srav2/lucene_full_ws/_25.cfe ./srav2/lucene_full_ws/_m.fnm ./srav2/lucene_full_ws/_18.fdt ./srav2/lucene_full_ws/_18_Lucene41_0.pos ./srav2/lucene_full_ws/_27.cfs ./srav2/lucene_full_ws/_1u.nvm ./srav2/transcripts.sqlite ./srav2/lucene_indexed_numeric_types.tsv ./srav2/all_transcripts.gtf.bgz ./srav2/samples.groups.tsv ./srav2/samples.tsv.fantom5_cage ./junctions.header.tsv