# intron

chrom: chr3
strand: -
right_annotated: ENSG00000279658.1:RP11-389G6.4:antisense:646
samples:
,0:1533,1:707,2:3387,3:2121,4:2218,5:6158,6:1736,7:4821,8:4136,9:4276,10:16815,11:10284,12:9507,13:7237,14:8278,15:6658,16:11215,17:5344


chrom: chr3
strand: -
right_annotated: ENSG00000170854.17:MINA:protein_coding:6880
samples:
,0:45931,1:44196,2:69601,3:111165,4:96342,5:161895,6:205029,7:143951,8:165650,9:330567,10:192322,11:123965,12:168440,13:121016,14:283122,15:99989,16:238099,17:197133


chrom: chr3
strand: +
right_annotated: ENSG00000231861.2:OR5K2:protein_coding:1060
samples:
,2:1200,3:6180,4:2821,5:2294,6:1706,7:2331,8:2847,9:3864,10:671,11:3677,12:2643,13:1610,14:1201,15:1212,16:2757,17:1210


chrom: chr3
strand: -
right_annotated: ENSG00000080822.16:CLDND1:protein_coding:5217
samples:
,0:38089,1:22557,2:652538,3:996155,4:825831,5:1337277,6:628205,7:1026358,8:855650,9:575358,10:1046537,11:893344,12:970241,13:874051,14:698892,15:545107,16:776858,17:328153


chrom: chr3
strand: -
right_annotated: ENSG00000080819.6:CPOX:protein_coding:3666
samples:
,0:43077,1:26633,2:305485,3:328412,4:316583,5:586306,6:321110,7:380295,8:403734,9:277001,10:452528,11:302660,12:421428,13:350659,14:335875,15:227103,16:361354,17:181280


chrom: chr3
strand: +
right_annotated: ENSG00000248839.1:RP11-227H4.5:antisense:388
samples:
,0:351,1:90,2:20971,3:865,4:19721,5:1197,6:8708,7:598,8:5640,9:202,10:3250,11:1673,12:6789,13:2882,14:3039,15:1977,16:5886,17:1772


chrom: chr3
strand: +
right_annotated: ENSG00000244153.1:WWP1P1:processed_pseudogene:2769
samples:
,0:1372,1:1374,2:2495,3:3538,4:2774,5:7750,6:6079,7:7742,8:7580,9:9774,10:4351,11:4027,12:2493,13:7473,14:6587,15:7151,16:7845,17:7943


chrom: chr3
strand: -
right_annotated: ENSG00000239445.5:ST3GAL6-AS1:antisense:843
samples:
,0:23,2:12489,3:5332,4:8127,5:11233,6:16153,7:11597,8:17749,9:3883,10:4973,11:5223,12:5327,13:12629,14:13099,15:17671,16:16685,17:4686


chrom: chr3
strand: +
right_annotated: ENSG00000064225.12:ST3GAL6:protein_coding:6288
samples:
,0:3164,1:5073,2:94984,3:145270,4:165349,5:375440,6:184021,7:465177,8:364525,9:165821,10:109338,11:165491,12:261835,13:283084,14:253212,15:374564,16:513589,17:120264


chrom: chr3
strand: +
right_annotated: ENSG00000249274.1:PDLIM1P4:processed_pseudogene:1006
samples:
,1:102,2:4537,3:5982,4:5332,5:10944,6:6572,7:21521,8:12403,9:6077,10:6628,11:13729,12:17593,13:18190,14:11788,15:29673,16:30721,17:7979


chrom: chr3
strand: -
right_annotated: ENSG00000057019.15:DCBLD2:protein_coding:11274
samples:
,0:320655,1:535533,2:436844,3:470778,4:496688,5:875002,6:382448,7:607557,8:508782,9:424290,10:1096756,11:766182,12:1012045,13:916226,14:729589,15:627284,16:877686,17:369149


chrom: chr3
strand: -
right_annotated: ENSG00000206712.1:RNU6-26P:snRNA:107
samples:
,0:153,1:62,2:1142,3:1688,4:2407,5:1769,6:1495,7:1611,8:1891,9:1714,10:3080,11:2329,12:3157,13:2257,14:2670,15:2854,16:4144,17:1754


chrom: chr3
strand: +
right_annotated: ENSG00000239462.1:CTD-2021J15.1:antisense:395
samples:
,1:137,2:360,3:294,4:449,5:692,6:393,7:288,8:666,9:317,10:305,11:552,12:1030,13:738,14:1045,15:975,16:615,17:119


chrom: chr3
strand: +
right_annotated: ENSG00000144810.15:COL8A1:protein_coding:9408
samples:
,0:141753,2:919,3:100,4:2599,5:1408,6:4225,7:2034,8:4915,9:2523,10:2926,11:3564,12:2097,13:1488,14:4656,15:2135,16:7787,17:1851


chrom: chr3
strand: -
right_annotated: ENSG00000273374.1:RP11-383I23.2:lincRNA:3360
samples:
,1:153,2:4302,3:7927,4:7840,5:4134,6:2944,7:4438,8:6978,9:4328,10:10028,11:6195,12:7046,13:2378,14:5918,15:1817,16:5878,17:1311


chrom: chr3
strand: +
right_annotated: ENSG00000184220.11:CMSS1:protein_coding:7210
samples:
,0:26491,1:29167,2:310448,3:405734,4:282766,5:443574,6:281424,7:315143,8:332895,9:281665,10:443638,11:309980,12:344032,13:257788,14:301337,15:185273,16:324317,17:140643


chrom: chr3
strand: -
right_annotated: ENSG00000168386.18:FILIP1L:protein_coding:5903
samples:
,0:33495,1:357,2:16658,3:21093,4:61178,5:36952,6:35869,7:38402,8:48773,9:33085,10:96057,11:172405,12:140176,13:57870,14:93221,15:92771,16:120445,17:63034


chrom: chr3
strand: +
right_annotated: ENSG00000243974.1:VTI1BP1:processed_pseudogene:700
samples:
,0:3796,1:1170,2:5580,3:8129,4:6273,5:11163,6:8661,7:9227,8:8065,9:8743,10:8373,11:4819,12:5006,13:7751,14:6014,15:3616,16:6665,17:7326


chrom: chr3
strand: +
right_annotated: ENSG00000036054.12:TBC1D23:protein_coding:5168
samples:
,0:136932,1:30293,2:264966,3:494319,4:343472,5:655058,6:351829,7:518611,8:375919,9:374135,10:896684,11:653877,12:835752,13:651447,14:771419,15:412081,16:694270,17:293567


chrom: chr3
strand: +
right_annotated: ENSG00000114021.11:NIT2:protein_coding:9264
samples:
,0:40683,1:46139,2:311096,3:385593,4:245553,5:565791,6:376658,7:520412,8:484480,9:522974,10:612696,11:380908,12:373422,13:419114,14:501848,15:429981,16:609515,17:348760


chrom: chr3
strand: -
right_annotated: ENSG00000154174.7:TOMM70:protein_coding:5387
samples:
,0:124696,1:101107,2:1182868,3:1537761,4:1390663,5:2700125,6:1738050,7:2198492,8:1783749,9:1788263,10:2415372,11:1508796,12:2445789,13:2235298,14:2780857,15:1442036,16:2611722,17:1173699


chrom: chr3
strand: +
right_annotated: ENSG00000206535.7:LNP1:protein_coding:2249
samples:
,0:7194,1:2350,2:119193,3:147314,4:89142,5:256356,6:161953,7:144153,8:134454,9:136288,10:247295,11:108877,12:153782,13:147161,14:171379,15:70853,16:130580,17:62743


chrom: chr3
strand: +
right_annotated: ENSG00000181458.10:TMEM45A:protein_coding:6005
samples:
,0:34108,1:1136,2:5154,3:10137,4:6395,5:14652,6:8219,7:8500,8:12843,9:5235,10:11902,11:11600,12:12977,13:8103,14:15322,15:6726,16:14394,17:4302


chrom: chr3
strand: -
right_annotated: ENSG00000243495.1:GMFBP1:processed_pseudogene:427
samples:
,2:3273,3:8304,4:3568,5:15071,6:6515,7:7503,8:5836,9:10488,10:15126,11:11298,12:7932,13:12708,14:9857,15:4294,16:10792,17:8224


chrom: chr3
strand: +
right_annotated: ENSG00000114354.13:TFG:protein_coding:4994
samples:
,0:76087,1:46640,2:1032126,3:971463,4:880041,5:1397652,6:979937,7:1086943,8:1127047,9:785101,10:1099673,11:741456,12:893024,13:691634,14:882367,15:512929,16:862094,17:373607


chrom: chr3
strand: -
right_annotated: ENSG00000154175.16:ABI3BP:protein_coding:10978
samples:
,0:732,1:369,2:8778,3:96244,4:93800,5:63845,6:160328,7:185549,8:379669,9:46920,10:35605,11:109708,12:75226,13:37588,14:137294,15:147934,16:227162,17:41957


chrom: chr3
strand: -
right_annotated: ENSG00000081148.11:IMPG2:protein_coding:8337
samples:
,0:598,1:288,2:16314,3:28707,4:20303,5:28809,6:28774,7:35298,8:30140,9:38371,10:94122,11:80688,12:69707,13:55233,14:89284,15:49565,16:86325,17:58992


chrom: chr3
strand: -
right_annotated: ENSG00000138468.15:SENP7:protein_coding:6396
samples:
,0:16687,1:5819,2:1068897,3:1556189,4:1364634,5:2261483,6:1144650,7:1288021,8:1060120,9:923353,10:2813405,11:2440037,12:2683863,13:1984536,14:2255158,15:1326747,16:1861175,17:790889


chrom: chr3
strand: +
right_annotated: ENSG00000241738.1:ZNF90P1:processed_pseudogene:1951
samples:
,0:50,1:203,2:3861,3:5719,4:4257,5:10495,6:4764,7:7907,8:6349,9:3622,10:60806,11:87923,12:61187,13:57418,14:61879,15:51967,16:53015,17:23234


chrom: chr3
strand: +
right_annotated: ENSG00000232830.5:RP11-144C15.1:processed_pseudogene:406
samples:
,0:170,1:853,2:288,5:339,6:200,7:633,10:14866,11:22435,12:8438,13:8118,14:10841,15:9026,16:10739,17:5277


chrom: chr3
strand: -
right_annotated: ENSG00000282978.1:RP11-144C15.2:processed_pseudogene:492
samples:
,0:2368,1:3286,2:12189,3:19799,4:13766,5:24309,6:13582,7:19407,8:20060,9:9015,10:42116,11:39228,12:43044,13:28454,14:38186,15:23538,16:41293,17:13752


chrom: chr3
strand: +
right_annotated: ENSG00000174173.6:TRMT10C:protein_coding:1888
samples:
,0:29766,1:34140,2:148744,3:280904,4:191661,5:309180,6:177421,7:254397,8:177505,9:185723,10:375005,11:251705,12:269044,13:244742,14:260882,15:133918,16:234246,17:107618


chrom: chr3
strand: +
right_annotated: ENSG00000081154.11:PCNP:protein_coding:3102
samples:
,0:95013,1:53721,2:670703,3:1163243,4:810811,5:1615319,6:697739,7:1353268,8:831411,9:794166,10:1592861,11:1179250,12:1237615,13:1320628,14:1042304,15:876333,16:1022388,17:496130


chrom: chr3
strand: -
right_annotated: ENSG00000242299.1:RP11-234A1.1:processed_pseudogene:459
samples:
,0:375268,1:152264,2:771076,3:690866,4:530612,5:1129942,6:1017023,7:986988,8:1106119,9:314170,10:2574268,11:1285378,12:1310707,13:1829299,14:1209800,15:774863,16:1775066,17:527223


chrom: chr3
strand: -
right_annotated: ENSG00000066422.4:ZBTB11:protein_coding:7416
samples:
,0:46473,1:34526,2:579002,3:752892,4:657968,5:1173675,6:639824,7:837259,8:752631,9:628374,10:1206852,11:983184,12:1234291,13:1065304,14:1130488,15:755718,16:1269443,17:507288


chrom: chr3
strand: -
right_annotated: ENSG00000201121.1:RNY1P12:misc_RNA:105
samples:
,0:806,1:1018,3:33,4:113,5:1121,6:340,7:233,9:417,10:640,11:1135,12:816,13:1051,14:1160,15:1849,16:765,17:405


chrom: chr3
strand: +
right_annotated: ENSG00000256628.3:ZBTB11-AS1:antisense:2743
samples:
,0:15674,1:10311,2:119943,3:31069,4:94488,5:69938,6:114800,7:33123,8:90610,9:27273,10:133658,11:92160,12:114817,13:120287,14:96265,15:71600,16:143635,17:73503


chrom: chr3
strand: -
right_annotated: ENSG00000114391.12:RPL24:protein_coding:2682
samples:
,0:323613,1:199485,2:3539448,3:5281167,4:3482407,5:6746893,6:3462944,7:5059489,8:4749844,9:2149996,10:5811126,11:2773176,12:4805793,13:4072931,14:3844736,15:1845455,16:4172698,17:859725


chrom: chr3
strand: +
right_annotated: ENSG00000244119.1:PDCL3P4:processed_pseudogene:720
samples:
,0:4247,1:2529,2:40455,3:42107,4:24824,5:54398,6:38753,7:45135,8:64358,9:29748,10:34739,11:16129,12:26272,13:24057,14:37561,15:20706,16:61317,17:9773


chrom: chr3
strand: +
right_annotated: ENSG00000182504.10:CEP97:protein_coding:9550
samples:
,0:61382,1:25106,2:466365,3:959917,4:670016,5:1223698,6:481287,7:840089,8:474897,9:422247,10:2472665,11:2115968,12:2138472,13:1877343,14:1690773,15:1024521,16:1379449,17:645456


chrom: chr3
strand: +
right_annotated: ENSG00000144815.15:NXPE3:protein_coding:8635
samples:
,0:44560,1:38821,2:355675,3:526176,4:392188,5:839890,6:433896,7:705323,8:472789,9:618573,10:771095,11:699557,12:781188,13:786047,14:821142,15:630409,16:846473,17:555356


chrom: chr3
strand: -
right_annotated: ENSG00000249474.1:RP11-49I4.3:antisense:360
samples:
,0:1539,1:771,2:11995,3:25167,4:18565,5:31083,6:14461,7:29891,8:14863,9:23976,10:27451,11:26770,12:21615,13:23245,14:23316,15:19854,16:22793,17:16368


chrom: chr3
strand: +
right_annotated: ENSG00000144802.11:NFKBIZ:protein_coding:5902
samples:
,0:21564,1:6888,2:15619,3:20865,4:17046,5:43336,6:28964,7:104072,8:37532,9:45695,10:54474,11:32058,12:34887,13:69576,14:44136,15:99926,16:55857,17:34439


chrom: chr3
strand: +
right_annotated: ENSG00000170017.12:ALCAM:protein_coding:7179
samples:
,0:746404,1:94503,2:100004,3:216766,4:717701,5:579996,6:800441,7:762476,8:949767,9:1402291,10:121702,11:296473,12:1485018,13:648933,14:1542248,15:682225,16:1780652,17:1284271


chrom: chr3
strand: -
right_annotated: ENSG00000114423.18:CBLB:protein_coding:11840
samples:
,0:10702,1:3720,2:1243448,3:1364702,4:1049462,5:2380778,6:854785,7:1598314,8:1101390,9:558108,10:1217181,11:1675414,12:1399610,13:1612451,14:1138926,15:1430038,16:1111602,17:449901


chrom: chr3
strand: +
right_annotated: ENSG00000200361.1:Y_RNA:misc_RNA:102
samples:
,2:71,3:121,4:350,5:314,6:95,7:261,8:979,9:183,10:694,11:536,12:333,13:1005,14:286,15:390,16:838,17:381


chrom: chr3
strand: -
right_annotated: ENSG00000242759.6:LINC00882:lincRNA:3882
samples:
,0:102,2:5369,3:11231,4:9793,5:17342,6:28347,7:19438,8:29985,9:31098,10:19117,11:24008,12:24619,13:36973,14:54856,15:40447,16:66388,17:47067


chrom: chr3
strand: -
right_annotated: ENSG00000239455.1:RP11-561O4.1:processed_pseudogene:1776
samples:
,0:7896,1:2528,2:298,3:904,4:405,5:1570,6:268,7:565,8:1446,9:1249,10:5791,11:5582,12:5001,13:4655,14:6553,15:8432,16:12588,17:7967


chrom: chr3
strand: +
right_annotated: ENSG00000243701.5:DUBR:lincRNA:4206
samples:
,0:14085,1:2236,2:174946,3:164973,4:144767,5:408269,6:213891,7:238370,8:207489,9:223134,10:271074,11:232551,12:218528,13:294915,14:255144,15:246566,16:274551,17:184430


chrom: chr3
strand: -
right_annotated: ENSG00000239828.6:RP11-446H18.5:lincRNA:3310
samples:
,0:188,2:3902,3:6076,4:4421,5:15988,6:5896,7:17972,8:9944,9:7805,10:12119,11:29896,12:19261,13:16568,14:13796,15:39333,16:19507,17:15216


chrom: chr3
strand: -
right_annotated: ENSG00000241218.1:RP11-446H18.1:processed_pseudogene:1368
samples:
,2:17051,3:28642,4:19582,5:55072,6:37650,7:65744,8:51598,9:26625,10:14739,11:17195,12:18036,13:23436,14:24852,15:25621,16:30073,17:13754


chrom: chr3
strand: +
right_annotated: ENSG00000272597.1:RP11-446H18.6:lincRNA:533
samples:
,2:1243,3:3357,4:5765,5:5660,6:4173,7:13142,8:8544,9:3780,10:2201,11:6797,12:5166,13:6506,14:6249,15:8680,16:5505,17:3103


chrom: chr3
strand: +
right_annotated: ENSG00000273125.1:RP11-115H18.1:lincRNA:1487
samples:
,1:41,2:559,3:942,4:1408,5:1575,6:1695,7:3994,8:4121,9:3271,10:1724,11:3550,12:1460,13:1828,14:4312,15:4857,16:5507,17:3239


chrom: chr3
strand: +
right_annotated: ENSG00000114439.18:BBX:protein_coding:11877
samples:
,0:89440,1:46624,2:412562,3:538202,4:415799,5:821215,6:262256,7:402671,8:344106,9:133331,10:1516223,11:983639,12:930789,13:802306,14:575227,15:472695,16:679432,17:132661


chrom: chr3
strand: +
right_annotated: ENSG00000240423.1:LINC00636:lincRNA:1264
samples:
,2:952,3:997,4:904,5:2437,6:2508,7:404,8:2543,9:1317,11:994,12:406,13:1586,14:2196,15:1184,16:3138,17:2544


chrom: chr3
strand: -
right_annotated: ENSG00000279277.1:RP11-861A13.3:TEC:1728
samples:
,0:102,1:173,2:3597,3:12659,4:5528,5:8666,6:4134,7:6984,8:7685,9:12392,10:10367,11:20514,12:15337,13:16869,14:15407,15:10548,16:22952,17:18982


chrom: chr3
strand: -
right_annotated: ENSG00000196776.14:CD47:protein_coding:7895
samples:
,0:89430,1:30804,2:872322,3:2305760,4:1757118,5:3373681,6:1793141,7:2301182,8:2107168,9:4244973,10:1946255,11:2577286,12:2843906,13:2855458,14:2960758,15:1893574,16:3437446,17:3449370


chrom: chr3
strand: +
right_annotated: ENSG00000271856.1:LINC01215:lincRNA:2592
samples:
,2:390,3:941,4:728,5:462,6:1549,7:606,8:890,9:6592,10:199,11:230,12:785,13:670,14:1671,15:282,16:789,17:1938


chrom: chr3
strand: -
right_annotated: ENSG00000114446.4:IFT57:protein_coding:3766
samples:
,0:75868,1:30595,2:262940,3:313943,4:278087,5:464583,6:317391,7:291239,8:420499,9:323579,10:429545,11:284565,12:397569,13:366306,14:338320,15:155463,16:414229,17:209931


chrom: chr3
strand: +
right_annotated: ENSG00000114455.13:HHLA2:protein_coding:3627
samples:
,1:102,3:742,4:200,5:202,6:1100,7:807,8:400,9:1615,10:351,11:713,12:696,13:340,14:1321,15:783,16:584,17:668


chrom: chr3
strand: -
right_annotated: ENSG00000144821.9:MYH15:protein_coding:7694
samples:
,0:1476,1:306,2:6602,3:10583,4:10016,5:10168,6:12859,7:8302,8:10070,9:21188,10:14018,11:12079,12:16506,13:10838,14:18361,15:8829,16:18564,17:12152


chrom: chr3
strand: -
right_annotated: ENSG00000241634.1:RP11-381E24.1:processed_pseudogene:509
samples:
,0:1183,1:466,2:20283,3:28215,4:17111,5:35815,6:24046,7:15902,8:18529,9:25264,10:31931,11:18411,12:22890,13:17230,14:18517,15:7388,16:14303,17:14502


chrom: chr3
strand: -
right_annotated: ENSG00000163507.13:KIAA1524:protein_coding:4579
samples:
,0:68517,1:53039,2:283173,3:318042,4:282580,5:452499,6:235498,7:209730,8:190351,9:341099,10:694119,11:447557,12:463256,13:331846,14:340217,15:174182,16:219064,17:176358


chrom: chr3
strand: +
right_annotated: ENSG00000202379.1:SNORA70:snoRNA:134
samples:
,0:194,2:596,3:167,4:5,5:722,6:72,8:128,9:122,10:4588,11:3060,12:3035,13:2518,14:1830,15:1380,16:550,17:360


chrom: chr3
strand: +
right_annotated: ENSG00000276763.1:RP11-381E24.4:processed_pseudogene:382
samples:
,0:524,2:1046,3:1570,4:206,5:1053,6:264,7:316,8:367,9:251,10:13426,11:8575,12:5566,13:5524,14:3586,15:2085,16:2625,17:1461


chrom: chr3
strand: +
right_annotated: ENSG00000280684.1:AC069499.1:protein_coding:48
samples:
,0:29,2:576,3:1222,4:1391,5:2072,6:1301,7:960,8:1051,9:2502,10:1771,11:2118,12:3320,13:1119,14:2975,15:1347,16:1300,17:2007


chrom: chr3
strand: +
right_annotated: ENSG00000198919.12:DZIP3:protein_coding:6972
samples:
,0:27839,1:19997,2:631372,3:878951,4:779795,5:1191968,6:857262,7:920812,8:921486,9:1402179,10:1547447,11:1033039,12:1454476,13:1032813,14:1496873,15:768498,16:1393973,17:968882


chrom: chr3
strand: -
right_annotated: ENSG00000114487.9:MORC1:protein_coding:3764
samples:
,3:868,4:437,5:339,6:2262,7:1880,8:2159,9:4138,10:200,11:404,12:935,13:1309,14:2543,15:612,16:3315,17:2612


chrom: chr3
strand: -
right_annotated: ENSG00000121570.12:DPPA4:protein_coding:4996
samples:
,0:95,1:89,2:14950,3:5168,4:5833,5:31439,6:9676,7:7105,8:13346,9:3628,10:7997,11:2773,12:9074,13:18460,14:12604,15:5203,16:11451,17:1226


chrom: chr3
strand: -
right_annotated: ENSG00000230618.3:H3F3AP3:processed_pseudogene:407
samples:
,2:2118,3:1824,4:1332,5:2570,6:540,7:345,8:655,9:128,10:2678,11:393,12:3149,13:1213,14:1207,15:404,16:1317,17:355


chrom: chr3
strand: -
right_annotated: ENSG00000214380.4:RP11-457K10.2:processed_pseudogene:618
samples:
,0:372,1:229,2:600,3:1615,4:897,5:2222,6:900,7:1414,8:1096,9:1616,10:1030,11:787,12:399,13:975,14:1100,15:303,16:800,17:807


chrom: chr3
strand: -
right_annotated: ENSG00000244722.1:RPSAP29:processed_pseudogene:869
samples:
,0:1034,1:881,2:3446,3:888,4:2384,5:1358,6:1478,7:1033,8:1651,9:881,10:1860,11:258,12:967,13:1007,14:1052,15:86,16:2657,17:685


chrom: chr3
strand: -
right_annotated: ENSG00000206532.2:RP11-553A10.1:lincRNA:1363
samples:
,0:203,1:251,2:2163,3:1149,4:2185,5:6200,6:8511,7:4055,8:3072,9:10407,10:3125,11:3236,12:5256,13:7502,14:10051,15:6016,16:10974,17:10277


chrom: chr3
strand: -
right_annotated: ENSG00000242242.5:PVRL3-AS1:antisense:1665
samples:
,0:232,1:83,2:2924,3:13270,4:5220,5:17285,6:21899,7:12781,8:13459,9:31751,10:6834,11:14837,12:13522,13:17956,14:29530,15:13536,16:27198,17:29805


chrom: chr3
strand: +
right_annotated: ENSG00000177707.10:NECTIN3:protein_coding:6184
samples:
,0:106210,1:30864,2:179575,3:304130,4:224963,5:553884,6:576003,7:482075,8:467825,9:836563,10:470452,11:812895,12:820377,13:974196,14:1935067,15:752779,16:1400422,17:1270777


chrom: chr3
strand: +
right_annotated: ENSG00000153283.12:CD96:protein_coding:5762
samples:
,2:1210,3:1955,4:3446,5:5250,6:1949,7:2445,8:2661,9:1724,10:1656,11:1473,12:1987,13:3426,14:1422,15:2396,16:2881,17:1730


chrom: chr3
strand: +
right_annotated: ENSG00000240891.7:PLCXD2:protein_coding:8974
samples:
,0:10020,1:15939,2:726797,3:1011341,4:1102080,5:1115789,6:1540904,7:1181916,8:1105682,9:1464471,10:1268630,11:1323893,12:2140038,13:865473,14:2573865,15:999741,16:1577191,17:1084803


chrom: chr3
strand: +
right_annotated: ENSG00000144824.19:PHLDB2:protein_coding:12109
samples:
,0:139907,1:58333,2:69722,3:84667,4:64587,5:97640,6:56281,7:100321,8:179310,9:259494,10:195112,11:127902,12:147480,13:102977,14:112212,15:101179,16:280317,17:218051


chrom: chr3
strand: +
right_annotated: ENSG00000144827.8:ABHD10:protein_coding:3021
samples:
,0:48563,1:32065,2:456074,3:513438,4:412688,5:609860,6:477471,7:541642,8:505704,9:366573,10:832886,11:505288,12:674053,13:572141,14:579415,15:336132,16:626751,17:245695


chrom: chr3
strand: +
right_annotated: ENSG00000144834.13:TAGLN3:protein_coding:1791
samples:
,1:51,2:1485907,3:1903227,4:1560028,5:2316945,6:2034158,7:1689794,8:2048070,9:1206989,10:1879175,11:1239452,12:1606922,13:1436604,14:1368255,15:643883,16:1281542,17:578753


chrom: chr3
strand: +
right_annotated: ENSG00000176040.13:TMPRSS7:protein_coding:3050
samples:
,1:204,2:4662,3:5418,4:2942,5:7475,6:2334,7:1855,8:1898,9:2767,10:12093,11:13690,12:6363,13:6909,14:5556,15:5097,16:7330,17:3125


chrom: chr3
strand: +
right_annotated: ENSG00000114529.12:C3orf52:protein_coding:6021
samples:
,0:15494,1:9113,2:5752,3:10562,4:2857,5:6036,6:915,7:3574,8:4169,9:3214,10:8265,11:8553,12:2976,13:4182,14:3347,15:3115,16:4118,17:1812


chrom: chr3
strand: -
right_annotated: ENSG00000174500.12:GCSAM:protein_coding:3783
samples:
,0:441,2:206,3:630,4:184,5:822,6:235,7:327,8:229,9:562,10:1170,11:2965,12:1290,13:776,14:905,15:998,16:871,17:247


chrom: chr3
strand: +
right_annotated: ENSG00000261488.1:RP11-757F18.5:antisense:1937
samples:
,0:561,1:357,2:2636,3:1202,4:200,5:369,6:400,7:808,8:2399,9:606,10:2741,11:2737,12:1000,13:606,14:1000,15:1010,16:1769,17:606


chrom: chr3
strand: -
right_annotated: ENSG00000172139.14:SLC9C1:protein_coding:4250
samples:
,0:102,1:2,2:277,3:580,4:468,5:450,6:470,7:438,8:300,9:518,10:3146,11:2990,12:2771,13:2399,14:1112,15:654,16:3191,17:1144


chrom: chr3
strand: +
right_annotated: ENSG00000239482.6:RP11-90K6.1:lincRNA:1262
samples:
,2:762,3:132,4:352,5:918,6:516,7:244,8:144,9:664,10:843,11:536,12:415,13:985,14:1723,15:302,16:996,17:592


chrom: chr3
strand: +
right_annotated: ENSG00000091972.18:CD200:protein_coding:2991
samples:
,2:1351397,3:1652965,4:1222032,5:2254044,6:1471035,7:1933415,8:1891327,9:1285531,10:1386769,11:1226904,12:1191761,13:1257584,14:1217722,15:909045,16:1285938,17:634853


chrom: chr3
strand: -
right_annotated: ENSG00000186265.9:BTLA:protein_coding:3697
samples:
,2:960,3:1010,4:1200,5:1818,6:1999,7:1109,8:600,9:1412,10:2180,11:1857,12:1701,13:1850,14:2740,15:808,16:2477,17:1278


chrom: chr3
strand: -
right_annotated: ENSG00000242525.1:OR7E100P:unprocessed_pseudogene:1015
samples:
,2:200,3:551,4:200,5:1084,6:800,7:402,8:992,9:404,10:3426,11:5435,12:3413,13:1212,14:2667,15:4601,16:3251,17:2365


chrom: chr3
strand: -
right_annotated: ENSG00000279349.1:RP11-147G7.3:TEC:2595
samples:
,0:203,2:9438,3:12482,4:11935,5:17076,6:19107,7:14386,8:17844,9:19585,10:11769,11:19033,12:10818,13:9816,14:13624,15:12877,16:13089,17:15780


chrom: chr3
strand: -
right_annotated: ENSG00000144848.10:ATG3:protein_coding:6111
samples:
,0:91839,1:38006,2:425405,3:496832,4:454780,5:639203,6:433816,7:473238,8:489462,9:354429,10:655252,11:402080,12:549250,13:444812,14:486937,15:270996,16:423497,17:216212


chrom: chr3
strand: +
right_annotated: ENSG00000138459.8:SLC35A5:protein_coding:4853
samples:
,0:50453,1:20937,2:419497,3:812025,4:534119,5:883459,6:503617,7:646456,8:467770,9:604649,10:950624,11:789282,12:817480,13:677932,14:747292,15:373181,16:622905,17:343523


chrom: chr3
strand: -
right_annotated: ENSG00000091986.15:CCDC80:protein_coding:13071
samples:
,0:775119,1:68968,2:21612,3:40079,4:13975,5:38998,6:59045,7:87677,8:179365,9:126749,10:57318,11:81102,12:42681,13:37934,14:88146,15:77604,16:200139,17:93685


chrom: chr3
strand: -
right_annotated: ENSG00000163606.10:CD200R1:protein_coding:3905
samples:
,1:51,2:200,3:2760,5:202,6:597,7:404,8:2737,9:1376,10:2046,11:1368,12:656,13:956,14:1087,15:1038,16:1255,17:676


chrom: chr3
strand: -
right_annotated: ENSG00000272844.1:RP11-484K9.4:antisense:707
samples:
,0:3691,1:3094,2:22311,3:6779,4:12596,5:13824,6:16328,7:7277,8:17180,9:7025,10:16011,11:6736,12:9052,13:10463,14:8065,15:4279,16:13086,17:3831


chrom: chr3
strand: +
right_annotated: ENSG00000163607.15:GTPBP8:protein_coding:3826
samples:
,0:21749,1:14639,2:137976,3:154886,4:148685,5:207017,6:148011,7:151225,8:146850,9:109221,10:249088,11:219854,12:225092,13:174743,14:197209,15:126152,16:195552,17:83029


chrom: chr3
strand: -
right_annotated: ENSG00000163608.14:NEPRO:protein_coding:6494
samples:
,0:48991,1:39768,2:519154,3:834766,4:433373,5:917794,6:483224,7:690903,8:580989,9:465952,10:1145416,11:856532,12:700020,13:679745,14:709023,15:457616,16:723301,17:306995


chrom: chr3
strand: +
right_annotated: ENSG00000240057.5:RP11-572M11.4:antisense:2002
samples:
,0:2720,1:2046,2:34643,3:13933,4:15279,5:30071,6:26670,7:13423,8:25359,9:9800,10:33368,11:19626,12:16640,13:17003,14:12373,15:14983,16:22713,17:9078


chrom: chr3
strand: -
right_annotated: ENSG00000243795.1:RP11-572M11.3:lincRNA:2502
samples:
,1:102,2:8228,3:23161,4:11767,5:14174,6:9403,7:12739,8:14679,9:7115,10:11946,11:15639,12:12906,13:8594,14:9118,15:10666,16:12596,17:4672


chrom: chr3
strand: +
right_annotated: ENSG00000144857.14:BOC:protein_coding:10330
samples:
,0:22746,1:2249,2:1852014,3:894041,4:766201,5:916126,6:428203,7:446050,8:535836,9:24735,10:1502459,11:760561,12:561812,13:477847,14:249166,15:284895,16:289252,17:15592


chrom: chr3
strand: -
right_annotated: ENSG00000206530.9:CFAP44:protein_coding:12143
samples:
,0:6400,1:9752,2:313558,3:362386,4:163874,5:238766,6:136679,7:176554,8:181974,9:117548,10:521958,11:328907,12:222105,13:159039,14:172828,15:121620,16:178512,17:63230


chrom: chr3
strand: -
right_annotated: ENSG00000283241.1:AC026348.1:protein_coding:5565
samples:
,0:3482,1:7647,2:84959,3:134695,4:52793,5:92033,6:55452,7:62155,8:69522,9:55872,10:245586,11:149612,12:102730,13:77636,14:98778,15:62652,16:92946,17:34275


chrom: chr3
strand: +
right_annotated: ENSG00000240751.1:RP11-553D4.2:processed_pseudogene:1053
samples:
,2:3342,3:3850,4:4051,5:3375,6:2154,7:1313,8:1542,9:1705,10:9834,11:8106,12:3882,13:2629,14:1751,15:1574,16:4094,17:1732


chrom: chr3
strand: +
right_annotated: ENSG00000243849.1:CFAP44-AS1:antisense:1023
samples:
,0:119,1:257,2:2847,3:2872,4:893,5:3177,6:1563,7:1318,8:2048,9:1058,10:10498,11:7624,12:4005,13:3324,14:4236,15:2713,16:4203,17:1504


chrom: chr3
strand: -
right_annotated: ENSG00000163611.11:SPICE1:protein_coding:7941
samples:
,0:14519,1:18436,2:177682,3:188027,4:118276,5:210434,6:109571,7:105996,8:113080,9:80760,10:689273,11:364078,12:284326,13:212364,14:217898,15:133465,16:207458,17:78497


chrom: chr3
strand: +
right_annotated: ENSG00000072858.10:SIDT1:protein_coding:8060
samples:
,0:102,1:2780,2:11058,3:21032,4:7611,5:24175,6:12304,7:17932,8:48814,9:67224,10:36034,11:20051,12:13266,13:16422,14:23293,15:15700,16:43832,17:50717


chrom: chr3
strand: +
right_annotated: ENSG00000241529.3:RN7SL767P:misc_RNA:295
samples:
,0:94072,1:56196,2:133,3:355,4:135,5:474,6:276,7:696,8:915,9:450,10:552346,11:379065,12:266176,13:273568,14:289384,15:98520,16:369371,17:69974


chrom: chr3
strand: -
right_annotated: ENSG00000176542.9:USF3:protein_coding:13738
samples:
,0:9084,1:5321,2:544818,3:863473,4:596622,5:1102344,6:609843,7:707189,8:676089,9:750133,10:911911,11:1162226,12:836964,13:700350,14:1038728,15:1196683,16:1149548,17:834682


chrom: chr3
strand: -
right_annotated: ENSG00000121579.12:NAA50:protein_coding:6436
samples:
,0:227881,1:152815,2:589417,3:1038032,4:636585,5:1273802,6:563462,7:960819,8:570385,9:632954,10:1573825,11:1171530,12:1240568,13:916731,14:1062574,15:641552,16:980533,17:485930


chrom: chr3
strand: -
right_annotated: ENSG00000239280.1:RP11-271C24.3:processed_pseudogene:432
samples:
,0:149,1:93,2:231,3:733,4:351,5:2046,6:693,7:1604,8:819,9:720,10:15321,11:23279,12:16848,13:13440,14:13710,15:15059,16:13795,17:7378


chrom: chr3
strand: -
right_annotated: ENSG00000242659.1:RP11-271C24.2:lincRNA:303
samples:
,0:2027,1:1373,2:17398,3:17921,4:15476,5:34400,6:21207,7:16261,8:20084,9:53612,10:40074,11:21445,12:28921,13:18772,14:32687,15:10923,16:49659,17:19691


chrom: chr3
strand: +
right_annotated: ENSG00000114573.9:ATP6V1A:protein_coding:5130
samples:
,0:158035,1:60421,2:833395,3:1791711,4:1136228,5:2229721,6:1278947,7:1623357,8:1337040,9:2262149,10:2997979,11:2179360,12:2698728,13:2070033,14:2865297,15:1277728,16:2666635,17:1707856


chrom: chr3
strand: +
right_annotated: ENSG00000178075.19:GRAMD1C:protein_coding:7814
samples:
,0:5677,1:203,2:74514,3:107998,4:52774,5:112842,6:34970,7:88658,8:78152,9:20143,10:160845,11:85495,12:81182,13:67929,14:51628,15:50311,16:80329,17:12003


chrom: chr3
strand: -
right_annotated: ENSG00000240776.1:RP11-435F17.1:processed_pseudogene:495
samples:
,0:4845,1:2103,2:1707,3:2909,4:1504,5:2527,6:1374,7:2190,8:3700,9:509,10:6027,11:629,12:2375,13:1718,14:2174,15:1224,16:2711,17:1294


chrom: chr3
strand: +
right_annotated: ENSG00000241889.1:RP11-435F17.3:processed_pseudogene:734
samples:
,0:2159,1:1172,2:33552,3:30881,4:21689,5:46425,6:41601,7:47698,8:46321,9:24301,10:12141,11:9821,12:8008,13:8144,14:5992,15:12236,16:11631,17:6527


chrom: chr3
strand: +
right_annotated: ENSG00000240375.1:VPS26AP1:processed_pseudogene:979
samples:
,0:77,1:51,2:297,3:697,4:95,5:1294,6:695,7:399,8:594,9:797,10:1282,11:1104,12:1694,13:802,14:694,15:1171,16:962,17:300


chrom: chr3
strand: -
right_annotated: ENSG00000273394.1:RP11-255E6.6:antisense:566
samples:
,0:153,2:520,3:378,4:467,5:144,6:895,7:1347,8:717,9:799,10:2481,11:1612,12:87,13:673,14:300,15:512,16:925,17:202


chrom: chr3
strand: +
right_annotated: ENSG00000184307.13:ZDHHC23:protein_coding:7138
samples:
,0:10901,1:5277,2:78558,3:159676,4:70081,5:116588,6:94090,7:151084,8:240130,9:327666,10:135957,11:129848,12:94801,13:74571,14:119071,15:87489,16:257880,17:172750


chrom: chr3
strand: -
right_annotated: ENSG00000163617.10:CCDC191:protein_coding:5303
samples:
,0:3096,1:3492,2:189020,3:239631,4:154261,5:233279,6:169527,7:242052,8:243372,9:265062,10:265303,11:167435,12:210692,13:157050,14:236252,15:156889,16:253153,17:131056


chrom: chr3
strand: +
right_annotated: ENSG00000151576.10:QTRT2:protein_coding:8054
samples:
,0:35328,1:50615,2:186032,3:297865,4:171264,5:334896,6:168633,7:253877,8:196060,9:193123,10:411522,11:230331,12:290812,13:211521,14:237275,15:146942,16:229587,17:99992


chrom: chr3
strand: -
right_annotated: ENSG00000240912.1:RP11-274J15.2:processed_pseudogene:380
samples:
,0:591,1:1373,2:1644,3:631,4:808,5:394,6:736,7:124,8:1171,9:163,10:2788,11:309,12:648,13:377,14:622,15:66,16:631,17:62


chrom: chr3
strand: +
right_annotated: ENSG00000241490.1:RP11-553L6.2:antisense:3101
samples:
,2:300,3:1210,4:100,6:200,7:401,8:400,9:202,10:598,11:706,12:175,13:121,14:283,15:703,16:1086,17:576


chrom: chr3
strand: -
right_annotated: ENSG00000174255.6:ZNF80:protein_coding:2948
samples:
,2:798,3:1816,4:432,5:1010,6:900,7:1007,8:800,9:202,10:1491,11:746,12:292,13:360,14:334,15:202,16:1283,17:404


chrom: chr3
strand: +
right_annotated: ENSG00000181847.11:TIGIT:protein_coding:6091
samples:
,0:91,2:200,3:403,4:576,5:340,6:22,7:164,8:443,9:202,10:5232,11:8509,12:1934,13:4292,14:2000,15:5171,16:3900,17:750


chrom: chr3
strand: -
right_annotated: ENSG00000259976.2:MIR568:3prime_overlapping_ncRNA:15214
samples:
,0:12508,1:10064,2:571315,3:1553518,4:849271,5:1234943,6:1069915,7:1451339,8:1182713,9:473425,10:2726931,11:3265050,12:2407751,13:1296558,14:2684738,15:2507088,16:2637146,17:618116


chrom: chr3
strand: -
right_annotated: ENSG00000181722.16:ZBTB20:protein_coding:31872
samples:
,0:24811,1:21797,2:721311,3:1688059,4:1036056,5:1537022,6:1427496,7:1634958,8:1343255,9:532331,10:5296185,11:6093140,12:4462428,13:2458427,14:5154387,15:4533732,16:5039589,17:1195017


chrom: chr3
strand: +
right_annotated: ENSG00000241560.5:ZBTB20-AS1:antisense:2035
samples:
,0:787,1:284,2:2823,3:1290,4:1118,5:4043,6:4375,7:2457,8:2459,9:420,10:82013,11:82057,12:68357,13:38479,14:82026,15:64031,16:79076,17:18842


chrom: chr3
strand: +
right_annotated: ENSG00000242290.2:RP11-197K3.1:lincRNA:1855
samples:
,1:129,2:259,3:277,5:42,6:127,7:401,8:163,10:22540,11:21747,12:12468,13:9273,14:8315,15:8510,16:11123,17:2084


chrom: chr3
strand: +
right_annotated: ENSG00000240002.1:YBX1P3:processed_pseudogene:909
samples:
,2:1773,3:272,4:720,5:1923,6:1777,7:272,8:445,9:136,10:6602,11:6137,12:3650,13:3236,14:4013,15:4671,16:6995,17:1282


chrom: chr3
strand: +
right_annotated: ENSG00000242767.1:ZBTB20-AS4:lincRNA:675
samples:
,2:241,3:728,4:420,5:800,6:1286,7:1067,8:521,9:630,10:4752,11:4521,12:3240,13:2586,14:3953,15:2521,16:5646,17:954


chrom: chr3
strand: +
right_annotated: ENSG00000279380.1:AC069063.2:protein_coding:1318
samples:
,3:1515,4:300,5:763,7:433,8:200,9:404,10:11752,11:12750,12:6285,13:6452,14:5887,15:6087,16:5379,17:2232


chrom: chr3
strand: +
right_annotated: ENSG00000242880.1:RP11-190P13.2:lincRNA:533
samples:
,2:292,3:628,4:588,5:1880,6:232,7:1928,8:2791,9:147,10:729,11:1213,12:3742,13:3462,14:4340,15:4800,16:7351,17:1973


chrom: chr3
strand: +
right_annotated: ENSG00000172020.12:GAP43:protein_coding:2087
samples:
,0:611,2:4207586,3:4917876,4:4145411,5:5466666,6:7550185,7:6836406,8:9139722,9:11173291,10:5460729,11:2904405,12:4167479,13:3330284,14:5571909,15:2885098,16:6155878,17:4867943


chrom: chr3
strand: -
right_annotated: ENSG00000185565.11:LSAMP:protein_coding:10330
samples:
,0:381,1:336,2:1957413,3:1790068,4:2256608,5:2567773,6:2621975,7:2490278,8:2924414,9:4832715,10:2983712,11:1938186,12:3364583,13:1281775,14:4442068,15:2355883,16:4016305,17:3690937


chrom: chr3
strand: +
right_annotated: ENSG00000243359.3:RN7SL815P:misc_RNA:290
samples:
,0:38,1:47,2:200,3:202,4:602,5:391,6:607,7:303,8:250,9:171,10:4952,11:5257,12:6134,13:4641,14:5594,15:6638,16:8250,17:8926


chrom: chr3
strand: +
right_annotated: ENSG00000240922.1:LSAMP-AS1:antisense:553
samples:
,2:177,3:510,4:70,6:365,7:357,8:102,10:33864,11:30148,12:18923,13:11006,14:19474,15:23282,16:25554,17:28183


chrom: chr3
strand: -
right_annotated: ENSG00000198406.7:BZW1P2:processed_pseudogene:826
samples:
,0:185528,1:102876,2:539472,3:1032960,4:606044,5:1185082,6:580497,7:733819,8:515998,9:610855,10:1381336,11:871325,12:979128,13:737593,14:850014,15:413689,16:774352,17:331025


chrom: chr3
strand: +
right_annotated: ENSG00000243197.7:TUSC7:antisense:3324
samples:
,2:772,3:122,7:530,8:237,9:1246,10:352681,11:250480,12:283720,13:42398,14:186709,15:140151,16:260678,17:238437


chrom: chr3
strand: +
right_annotated: ENSG00000243014.1:PTMAP8:processed_pseudogene:342
samples:
,0:2003,1:1547,2:1245,3:478,4:1090,5:798,6:2114,7:549,8:1141,9:590,10:8039,11:5154,12:4483,13:2138,14:5141,15:4064,16:5945,17:7453


chrom: chr3
strand: -
right_annotated: ENSG00000239268.2:RP11-384F7.2:lincRNA:554
samples:
,0:153,1:204,2:151997,3:25964,4:103802,5:36686,6:116123,7:32065,8:104119,9:95057,10:413914,11:192907,12:382810,13:55015,14:318162,15:125553,16:350880,17:282255


chrom: chr3
strand: -
right_annotated: ENSG00000240393.1:RP11-768G7.1:processed_pseudogene:803
samples:
,2:417,3:192,4:240,5:400,6:1000,7:760,8:981,9:808,10:131237,11:94592,12:136203,13:17249,14:76404,15:61320,16:117212,17:84941


chrom: chr3
strand: -
right_annotated: ENSG00000241213.1:RP11-768G7.2:lincRNA:969
samples:
,1:1,2:673,3:486,4:617,5:213,6:1140,7:949,8:200,9:213,10:103067,11:76072,12:80210,13:13821,14:46404,15:33380,16:77609,17:66669


chrom: chr3
strand: -
right_annotated: ENSG00000144847.12:IGSF11:protein_coding:4899
samples:
,1:7908,2:186028,3:154484,4:132756,5:228986,6:166725,7:129182,8:136539,9:107452,10:254182,11:151137,12:154834,13:138402,14:156825,15:86453,16:119164,17:72711


chrom: chr3
strand: +
right_annotated: ENSG00000239877.2:IGSF11-AS1:antisense:1604
samples:
,0:32,1:25,2:200,4:126,5:209,7:348,9:47,10:14835,11:10917,12:8890,13:5782,14:9778,15:5938,16:5984,17:5026


chrom: chr3
strand: +
right_annotated: ENSG00000114638.7:UPK1B:protein_coding:2266
samples:
,0:154,1:16425,2:331,3:805,4:200,5:407,6:522,7:1606,8:577,9:2109,10:7105,11:8692,12:4735,13:4026,14:4643,15:11700,16:8615,17:13558


chrom: chr3
strand: -
right_annotated: ENSG00000121578.12:B4GALT4:protein_coding:7145
samples:
,0:83543,1:112384,2:128295,3:192373,4:127123,5:265857,6:133852,7:240221,8:221417,9:152515,10:229210,11:184862,12:189096,13:187728,14:170403,15:163455,16:236053,17:138275


chrom: chr3
strand: +
right_annotated: ENSG00000240254.1:B4GALT4-AS1:antisense:544
samples:
,0:4262,1:7108,2:3808,3:8010,4:5199,5:10391,6:3975,7:8589,8:8948,9:4299,10:12473,11:11019,12:9644,13:9219,14:7921,15:9534,16:11123,17:8105


chrom: chr3
strand: +
right_annotated: ENSG00000031081.10:ARHGAP31:protein_coding:9384
samples:
,0:41672,1:510,2:160093,3:159572,4:99798,5:281881,6:142531,7:195552,8:277653,9:195001,10:221202,11:178256,12:118617,13:181572,14:155454,15:165421,16:261027,17:145142


chrom: chr3
strand: -
right_annotated: ENSG00000241155.1:ARHGAP31-AS1:antisense:624
samples:
,0:204,1:47,2:4588,3:2389,4:3386,5:6022,6:6385,7:2723,8:4511,9:2857,10:8068,11:6648,12:7362,13:5302,14:10939,15:4470,16:4765,17:3538


chrom: chr3
strand: -
right_annotated: ENSG00000176142.12:TMEM39A:protein_coding:5333
samples:
,0:44657,1:14619,2:223568,3:264629,4:198463,5:401479,6:170463,7:302086,8:249051,9:143682,10:343741,11:255569,12:238387,13:263120,14:175671,15:198817,16:219422,17:109039


chrom: chr3
strand: +
right_annotated: ENSG00000163389.10:POGLUT1:protein_coding:7097
samples:
,0:33115,1:11418,2:197364,3:389265,4:233835,5:406391,6:198646,7:337690,8:248112,9:234650,10:477620,11:366793,12:388260,13:324435,14:294730,15:225913,16:332198,17:160559


chrom: chr3
strand: -
right_annotated: ENSG00000272662.1:RP11-190C22.8:lincRNA:504
samples:
,0:202,1:506,2:750,3:2130,5:200,6:153,7:202,8:438,9:433,10:1300,11:848,12:2123,13:2104,14:1399,15:2158,16:1986,17:1140


chrom: chr3
strand: +
right_annotated: ENSG00000113845.9:TIMMDC1:protein_coding:2730
samples:
,0:76599,1:54878,2:297649,3:421611,4:259439,5:447367,6:335719,7:351403,8:305197,9:253054,10:433883,11:295362,12:331940,13:300949,14:313917,15:199545,16:319685,17:138736


chrom: chr3
strand: -
right_annotated: ENSG00000121594.11:CD80:protein_coding:3201
samples:
,2:200,4:400,5:1355,6:200,7:671,8:200,9:199,10:5986,11:12554,12:7460,13:7040,14:5269,15:6496,16:4230,17:2488


chrom: chr3
strand: +
right_annotated: ENSG00000144843.11:ADPRH:protein_coding:4615
samples:
,0:6139,1:3050,2:7076,3:13924,4:9566,5:16661,6:28076,7:28826,8:33350,9:23167,10:18852,11:10355,12:11563,13:12901,14:23236,15:16699,16:29000,17:14869


chrom: chr3
strand: -
right_annotated: ENSG00000242052.1:RP11-190C22.1:processed_pseudogene:625
samples:
,2:6388,3:2161,4:4195,5:1692,6:4698,7:2223,8:5008,9:1431,10:4959,11:927,12:2489,13:1607,14:2815,15:1564,16:12645,17:847


chrom: chr3
strand: -
right_annotated: ENSG00000121577.13:POPDC2:protein_coding:2445
samples:
,0:691,1:52,2:17960,3:20343,4:12858,5:37376,6:30343,7:32717,8:27490,9:20309,10:20647,11:13557,12:15460,13:16944,14:22231,15:14683,16:17233,17:14300


chrom: chr3
strand: -
right_annotated: ENSG00000138495.6:COX17:protein_coding:2172
samples:
,0:11612,1:17120,2:122445,3:131049,4:103783,5:202464,6:157216,7:137093,8:149104,9:147167,10:179421,11:88066,12:145025,13:117565,14:136580,15:71631,16:133352,17:70401


chrom: chr3
strand: +
right_annotated: ENSG00000183833.16:MAATS1:protein_coding:7106
samples:
,1:101,2:89932,3:197952,4:96230,5:163641,6:101261,7:137846,8:120766,9:247088,10:188364,11:155384,12:110122,13:112582,14:126574,15:93643,16:132213,17:132349


chrom: chr3
strand: -
right_annotated: ENSG00000239994.2:RP11-169N13.4:antisense:266
samples:
,2:1296,3:1367,4:1036,5:1061,6:1413,7:1086,8:1297,9:2370,10:2042,11:1733,12:1038,13:769,14:1440,15:811,16:1619,17:1170


chrom: chr3
strand: +
right_annotated: ENSG00000144852.16:NR1I2:protein_coding:5381
samples:
,2:2668,3:5510,4:1805,5:3945,6:8385,7:2982,8:4368,9:9421,10:5205,11:4564,12:5399,13:3990,14:7598,15:4652,16:4990,17:5940


chrom: chr3
strand: -
right_annotated: ENSG00000082701.14:GSK3B:protein_coding:8006
samples:
,0:46202,1:24600,2:2127121,3:3352015,4:2408012,5:4253206,6:2263039,7:2972695,8:2373784,9:2758875,10:2675873,11:3230928,12:3204473,13:2737523,14:3152527,15:2526903,16:2655519,17:2060565


chrom: chr3
strand: +
right_annotated: ENSG00000239835.1:RP11-767L7.1:processed_pseudogene:1129
samples:
,0:51,3:1108,4:200,5:101,7:706,9:175,10:39437,11:49802,12:34368,13:17067,14:28364,15:30750,16:31768,17:12695


chrom: chr3
strand: +
right_annotated: ENSG00000242622.1:RP11-18H7.1:lincRNA:2194
samples:
,0:1493,1:1965,2:33724,3:34087,4:38572,5:34378,6:40712,7:25013,8:32611,9:22849,10:91356,11:71604,12:82508,13:55935,14:56498,15:40935,16:78407,17:21806


chrom: chr3
strand: -
right_annotated: ENSG00000244308.2:RN7SL762P:misc_RNA:289
samples:
,0:262,1:97,2:814,3:2428,4:2021,5:2406,6:1916,7:1658,8:2486,9:1587,10:6854,11:4893,12:6028,13:2281,14:4356,15:2830,16:5222,17:1822


chrom: chr3
strand: +
right_annotated: ENSG00000244139.3:RN7SL397P:misc_RNA:298
samples:
,0:286,1:323,2:166,3:118,5:120,7:87,8:196,10:23906,11:4322,12:11976,13:1950,14:12838,15:2397,16:30068,17:788


chrom: chr3
strand: -
right_annotated: ENSG00000175697.10:GPR156:protein_coding:6058
samples:
,0:103,1:179,2:356154,3:341222,4:201086,5:424161,6:145746,7:199306,8:205168,9:144439,10:716532,11:394947,12:313159,13:240269,14:144053,15:147919,16:211833,17:89289


chrom: chr3
strand: +
right_annotated: ENSG00000240882.1:RP11-174O3.1:processed_pseudogene:1227
samples:
,0:499,1:790,2:38595,3:40878,4:41655,5:32868,6:63513,7:28397,8:46200,9:26006,10:22289,11:14490,12:20792,13:15094,14:23227,15:8640,16:18896,17:9576


chrom: chr3
strand: -
right_annotated: ENSG00000163428.3:LRRC58:protein_coding:7903
samples:
,0:49142,1:56201,2:382079,3:682296,4:502036,5:867762,6:373937,7:591644,8:374943,9:332787,10:1229278,11:1161330,12:1023391,13:956710,14:828718,15:638754,16:778444,17:362118


chrom: chr3
strand: +
right_annotated: ENSG00000240661.3:RP11-174O3.3:transcribed_unitary_pseudogene:4265
samples:
,0:35665,1:683,2:8075,3:8464,4:7234,5:11206,6:33456,7:4210,8:6485,9:2207,10:23298,11:22650,12:16128,13:16898,14:115858,15:16595,16:13074,17:4110


chrom: chr3
strand: -
right_annotated: ENSG00000163430.10:FSTL1:protein_coding:8727
samples:
,0:3853548,1:67242,2:1062038,3:1351873,4:1320338,5:2093669,6:862966,7:1363928,8:1159593,9:328980,10:1943828,11:1221733,12:1911391,13:1435040,14:979810,15:728623,16:1209652,17:172742


chrom: chr3
strand: +
right_annotated: ENSG00000065518.7:NDUFB4:protein_coding:1889
samples:
,0:32255,1:24928,2:835734,3:797667,4:560981,5:1195428,6:872540,7:813519,8:967503,9:554039,10:780148,11:378691,12:620119,13:474153,14:523968,15:268505,16:651242,17:202259


chrom: chr3
strand: -
right_annotated: ENSG00000113924.11:HGD:protein_coding:2983
samples:
,0:102,1:49318,2:1541,3:2277,4:1521,5:4521,6:4654,7:7066,8:10915,9:645,10:2017,11:1952,12:1786,13:3942,14:4273,15:4169,16:6760


chrom: chr3
strand: -
right_annotated: ENSG00000144840.8:RABL3:protein_coding:4684
samples:
,0:26107,1:19033,2:153077,3:268888,4:183000,5:431560,6:192797,7:265557,8:226030,9:228579,10:281441,11:208292,12:204463,13:236488,14:208769,15:144595,16:215078,17:113159


chrom: chr3
strand: +
right_annotated: ENSG00000153767.9:GTF2E1:protein_coding:3370
samples:
,0:23911,1:27803,2:150288,3:217892,4:169965,5:274227,6:165451,7:178667,8:157321,9:160373,10:334392,11:191432,12:290119,13:215384,14:242303,15:117148,16:195126,17:88786


chrom: chr3
strand: +
right_annotated: ENSG00000213371.4:NAP1L1P3:processed_pseudogene:880
samples:
,0:6103,1:6428,2:133,3:133,4:108,5:311,6:204,7:199,8:444,10:2221,11:583,12:1267,13:625,14:611,15:372,16:748,17:198


chrom: chr3
strand: +
right_annotated: ENSG00000145087.12:STXBP5L:protein_coding:11085
samples:
,1:357,2:97442,3:254106,4:169464,5:310852,6:223782,7:239704,8:300465,9:240084,10:388102,11:554961,12:482527,13:388595,14:595046,15:358546,16:770311,17:286574


chrom: chr3
strand: -
right_annotated: ENSG00000051341.13:POLQ:protein_coding:9400
samples:
,0:37702,1:39016,2:156790,3:162303,4:86772,5:180909,6:36759,7:71345,8:32071,9:32204,10:636845,11:285860,12:241279,13:181846,14:91821,15:90573,16:84096,17:31246


chrom: chr3
strand: +
right_annotated: ENSG00000242445.1:RPL7AP11:processed_pseudogene:799
samples:
,0:25358,1:18920,2:225814,3:159695,4:140005,5:225978,6:204683,7:150530,8:226137,9:78046,10:191726,11:72158,12:182397,13:97224,14:145066,15:67068,16:154969,17:29478


chrom: chr3
strand: -
right_annotated: ENSG00000180353.10:HCLS1:protein_coding:5093
samples:
,0:3760,2:7905,3:6713,4:4336,5:26044,6:17899,7:45789,8:36020,9:6118,10:13326,11:5188,12:8301,13:9482,14:16663,15:19366,16:30866,17:2364


chrom: chr3
strand: -
right_annotated: ENSG00000173230.15:GOLGB1:protein_coding:11865
samples:
,0:161260,1:57457,2:1460287,3:2559173,4:1796064,5:3368081,6:2047548,7:2296500,8:1973657,9:2069592,10:3810958,11:3287710,12:4004180,13:3218503,14:4091900,15:2423922,16:3464092,17:1539912


chrom: chr3
strand: -
right_annotated: ENSG00000173226.16:IQCB1:protein_coding:3049
samples:
,0:16766,1:14672,2:314625,3:480895,4:255671,5:602072,6:277894,7:370300,8:340472,9:297387,10:624130,11:371721,12:416698,13:383696,14:405858,15:216370,16:414480,17:157504


chrom: chr3
strand: +
right_annotated: ENSG00000145088.8:EAF2:protein_coding:1770
samples:
,0:305,1:2058,2:9539,3:12254,4:4283,5:16682,6:3579,7:6381,8:11404,9:6444,10:32110,11:20964,12:17871,13:15474,14:9740,15:12872,16:21804,17:8406


chrom: chr3
strand: +
right_annotated: ENSG00000163406.10:SLC15A2:protein_coding:6210
samples:
,0:102,1:337,2:99028,3:135773,4:77655,5:281765,6:121333,7:199289,8:198127,9:88768,10:119165,11:111857,12:130247,13:157262,14:152383,15:113117,16:228647,17:48515


chrom: chr3
strand: +
right_annotated: ENSG00000114013.15:CD86:protein_coding:3433
samples:
,2:3024,3:4018,4:2871,5:13307,6:7755,7:17262,8:18443,9:5568,10:5049,11:2907,12:2935,13:8555,14:8553,15:9594,16:13325,17:859


chrom: chr3
strand: +
right_annotated: ENSG00000240236.1:HNRNPA1P23:processed_pseudogene:1133
samples:
,0:33,2:669,3:412,4:234,5:842,6:134,7:900,8:1160,9:100,10:452,11:302,12:165,13:197,14:240,16:261,17:177


chrom: chr3
strand: -
right_annotated: ENSG00000160124.9:CCDC58:protein_coding:1746
samples:
,0:9298,1:13347,2:82876,3:139587,4:88548,5:169451,6:70193,7:102726,8:85811,9:90930,10:133948,11:70411,12:103546,13:76532,14:86010,15:51206,16:74348,17:30652


chrom: chr3
strand: +
right_annotated: ENSG00000114023.15:FAM162A:protein_coding:3793
samples:
,0:14298,1:12381,2:119718,3:172350,4:110146,5:168611,6:122247,7:138134,8:150207,9:132523,10:219875,11:145822,12:155930,13:116721,14:121889,15:68629,16:152920,17:68296


chrom: chr3
strand: -
right_annotated: ENSG00000196981.3:WDR5B:protein_coding:3720
samples:
,0:7606,1:6051,2:110191,3:210605,4:130916,5:211914,6:105630,7:155265,8:132941,9:101219,10:230283,11:205387,12:207439,13:164578,14:157004,15:91083,16:170540,17:68353


chrom: chr3
strand: +
right_annotated: ENSG00000272758.5:RP11-299J3.8:antisense:2891
samples:
,0:20993,1:13131,2:334591,3:550830,4:380719,5:766835,6:423759,7:558961,8:410064,9:445195,10:572826,11:510109,12:575983,13:499359,14:583129,15:362054,16:494902,17:256009


chrom: chr3
strand: -
right_annotated: ENSG00000242531.1:RP11-299J3.6:unprocessed_pseudogene:131
samples:
,0:66,1:167,2:575,3:1230,4:1193,5:593,6:107,7:642,8:1529,9:731,10:5332,11:6240,12:7352,13:3591,14:4725,15:2796,16:7650,17:2561


chrom: chr3
strand: -
right_annotated: ENSG00000114030.12:KPNA1:protein_coding:8451
samples:
,0:69153,1:38057,2:1056360,3:1725826,4:1204352,5:2293724,6:1287733,7:1725477,8:1309050,9:1391617,10:1878363,11:1805722,12:1918448,13:1727816,14:2013114,15:1241012,16:1637166,17:917410


chrom: chr3
strand: -
right_annotated: ENSG00000138496.16:PARP9:protein_coding:8938
samples:
,0:38717,1:6491,2:61343,3:60707,4:41794,5:114529,6:46393,7:87551,8:86789,9:25941,10:81922,11:46019,12:59439,13:59101,14:53240,15:54464,16:78866,17:11336


chrom: chr3
strand: +
right_annotated: ENSG00000163840.9:DTX3L:protein_coding:5868
samples:
,0:30369,1:11621,2:45382,3:64975,4:38556,5:111746,6:38124,7:69520,8:68668,9:21879,10:102288,11:77410,12:71996,13:75591,14:68817,15:70441,16:94865,17:18174


chrom: chr3
strand: +
right_annotated: ENSG00000173200.12:PARP15:protein_coding:5507
samples:
,2:900,3:559,4:800,5:2699,6:683,7:4911,8:1577,9:1821,10:1295,11:1527,12:1168,13:2465,14:2359,15:1288,16:2325,17:909


chrom: chr3
strand: +
right_annotated: ENSG00000243918.1:EIF4BP8:processed_pseudogene:1826
samples:
,0:2006,1:2535,2:1434,3:1919,4:836,5:1619,6:1107,7:1076,8:1079,9:1327,10:5133,11:1656,12:2634,13:3901,14:2671,15:1589,16:2699,17:1403


chrom: chr3
strand: +
right_annotated: ENSG00000173193.13:PARP14:protein_coding:10495
samples:
,0:66950,1:41744,2:75485,3:146603,4:71147,5:214956,6:86703,7:137171,8:130906,9:58036,10:239517,11:210644,12:180834,13:171601,14:178156,15:137841,16:242533,17:47360


chrom: chr3
strand: -
right_annotated: ENSG00000169087.10:HSPBAP1:protein_coding:5434
samples:
,0:2645,1:5808,2:133140,3:168405,4:85713,5:165893,6:73373,7:101209,8:85468,9:48374,10:225879,11:187673,12:135195,13:130808,14:93330,15:103029,16:106917,17:45172


chrom: chr3
strand: +
right_annotated: ENSG00000138463.8:DIRC2:protein_coding:3596
samples:
,0:13889,1:12588,2:151915,3:170010,4:130495,5:244870,6:141648,7:166796,8:193340,9:135008,10:295702,11:255586,12:240764,13:208266,14:232862,15:220072,16:306113,17:146546


chrom: chr3
strand: +
right_annotated: ENSG00000273033.2:RP11-67L2.2:lincRNA:5476
samples:
,0:2478,1:1985,2:201545,3:355451,4:193740,5:383810,6:227407,7:449154,8:322015,9:274926,10:225740,11:245367,12:183655,13:176585,14:209892,15:279210,16:299459,17:149010


chrom: chr3
strand: -
right_annotated: ENSG00000082684.14:SEMA5B:protein_coding:6224
samples:
,1:102,2:2202318,3:1328815,4:984106,5:1201073,6:932771,7:791944,8:1101990,9:209286,10:1410516,11:582051,12:521838,13:440145,14:337094,15:367125,16:440534,17:117726


chrom: chr3
strand: +
right_annotated: ENSG00000065485.18:PDIA5:protein_coding:4030
samples:
,0:49147,1:18071,2:102580,3:102139,4:61278,5:149672,6:68161,7:97049,8:102250,9:58981,10:208257,11:111067,12:113047,13:116748,14:105698,15:77063,16:128805,17:36452


chrom: chr3
strand: +
right_annotated: ENSG00000121542.11:SEC22A:protein_coding:4698
samples:
,0:25043,1:12421,2:177655,3:328812,4:181325,5:420253,6:227798,7:294575,8:258634,9:198990,10:531540,11:356738,12:347728,13:344286,14:334992,15:205863,16:354115,17:135330


chrom: chr3
strand: +
right_annotated: ENSG00000273454.1:RP11-797D24.3:lincRNA:552
samples:
,2:2185,3:2959,4:1236,5:5599,6:1946,7:3150,8:2754,9:3370,10:6267,11:9047,12:4183,13:6822,14:6639,15:5615,16:6171,17:1905


chrom: chr3
strand: -
right_annotated: ENSG00000173175.14:ADCY5:protein_coding:8873
samples:
,0:713,1:1621,2:1372569,3:905516,4:793808,5:1320545,6:1326652,7:1041492,8:1475383,9:990464,10:582507,11:460142,12:431228,13:768102,14:565862,15:578719,16:671430,17:629934


chrom: chr3
strand: +
right_annotated: ENSG00000272678.1:RP11-797D24.4:antisense:391
samples:
,2:27427,3:51548,4:25406,5:49023,6:32815,7:53429,8:32663,9:40651,10:13680,11:14885,12:8964,13:23904,14:15656,15:19831,16:14496,17:22010


chrom: chr3
strand: -
right_annotated: ENSG00000206527.9:HACD2:protein_coding:5351
samples:
,0:75373,1:56579,2:425687,3:799192,4:565725,5:968961,6:621220,7:806678,8:703494,9:856223,10:785364,11:774597,12:831530,13:681830,14:870968,15:530920,16:871725,17:600090


chrom: chr3
strand: +
right_annotated: ENSG00000239523.5:MYLK-AS1:antisense:980
samples:
,0:22072,1:1632,2:17977,3:23421,4:12816,5:33671,6:25946,7:17547,8:27234,9:15350,10:41263,11:26754,12:18378,13:28627,14:25079,15:13822,16:26191,17:13781


chrom: chr3
strand: -
right_annotated: ENSG00000065534.18:MYLK:protein_coding:22167
samples:
,0:1023525,1:40330,2:90705,3:161884,4:57503,5:89686,6:66788,7:73155,8:83546,9:83676,10:352604,11:286520,12:149693,13:99580,14:133139,15:143010,16:166325,17:97829


chrom: chr3
strand: +
right_annotated: ENSG00000250174.5:MYLK-AS2:antisense:827
samples:
,0:6,1:101,2:2443,3:1778,4:1340,5:2566,6:1409,7:1978,8:2591,9:3209,10:1660,11:4489,12:1786,13:949,14:1974,15:2108,16:3280,17:3287


chrom: chr3
strand: +
right_annotated: ENSG00000273123.1:RP11-9N20.3:antisense:549
samples:
,0:443,2:2170,3:988,4:1361,5:4954,6:798,7:3448,8:2807,9:2934,10:1999,11:1103,12:905,13:954,14:1304,15:961,16:1809,17:1562


chrom: chr3
strand: -
right_annotated: ENSG00000175455.14:CCDC14:protein_coding:11423
samples:
,0:108475,1:33967,2:2864225,3:3887212,4:2866047,5:4447297,6:2457419,7:3088845,8:2723438,9:2412974,10:5829812,11:4384137,12:4545995,13:3321978,14:3661701,15:2274117,16:3126913,17:1399071


chrom: chr3
strand: -
right_annotated: ENSG00000065371.17:ROPN1:protein_coding:4518
samples:
,0:203,2:902,3:1955,4:3693,5:2177,6:2906,7:1034,8:5256,9:3889,10:5765,11:4722,12:5465,13:4268,14:6182,15:4375,16:10468,17:5618


chrom: chr3
strand: +
right_annotated: ENSG00000160145.15:KALRN:protein_coding:24490
samples:
,0:17324,1:1819,2:2998123,3:4696761,4:3817753,5:6655305,6:4273413,7:5409214,8:5203189,9:3652193,10:7101474,11:8130166,12:8694085,13:5865576,14:8534199,15:6958919,16:9171791,17:3935576


chrom: chr3
strand: -
right_annotated: ENSG00000240622.1:RPL7P15:processed_pseudogene:712
samples:
,0:1338,1:1216,2:710,3:2833,4:1089,5:1819,6:1028,7:2692,8:720,9:1248,10:14223,11:34490,12:9237,13:6060,14:7401,15:22653,16:11678,17:7898


chrom: chr3
strand: +
right_annotated: ENSG00000260391.2:RP11-71H17.7:sense_overlapping:2538
samples:
,0:178,2:471941,3:1453727,4:664799,5:1377092,6:583483,7:1523039,8:865364,9:796915,10:831182,11:1028139,12:1024796,13:668959,14:917117,15:758790,16:967098,17:417641


chrom: chr3
strand: +
right_annotated: ENSG00000114491.13:UMPS:protein_coding:7579
samples:
,0:50827,1:64890,2:289352,3:396450,4:235269,5:550904,6:260210,7:346322,8:319857,9:232264,10:803713,11:477397,12:512843,13:486468,14:434464,15:313075,16:493766,17:215266


chrom: chr3
strand: +
right_annotated: ENSG00000265981.1:MIR544B:miRNA:78
samples:
,1:74,2:304,3:830,4:139,5:189,6:66,7:202,8:147,9:282,10:2441,11:2083,12:2648,13:662,14:2296,15:786,16:2499,17:470


chrom: chr3
strand: -
right_annotated: ENSG00000242199.1:RP11-71H17.1:processed_pseudogene:337
samples:
,0:97,1:140,2:319,3:1009,4:393,5:513,6:300,7:133,8:100,9:499,10:5939,11:4527,12:5633,13:4414,14:2722,15:1793,16:6582,17:2165


chrom: chr3
strand: -
right_annotated: ENSG00000082781.11:ITGB5:protein_coding:6447
samples:
,0:249824,1:262904,2:300692,3:316283,4:123140,5:344300,6:248544,7:299402,8:333659,9:116625,10:273661,11:240116,12:137844,13:186781,14:168137,15:116530,16:250819,17:59278


chrom: chr3
strand: -
right_annotated: ENSG00000280042.1:RP11-71H17.8:TEC:1986
samples:
,0:102,1:447,2:782,3:646,4:42,5:879,6:519,7:605,8:786,9:606,10:1775,11:5344,12:1183,13:1414,14:1270,15:5924,16:3466,17:1438


chrom: chr3
strand: -
right_annotated: ENSG00000173706.12:HEG1:protein_coding:9925
samples:
,0:84947,1:3918,2:1396956,3:1273795,4:822971,5:1318791,6:631488,7:744581,8:648477,9:312906,10:1654833,11:971208,12:866783,13:336829,14:632766,15:521691,16:452599,17:168941


chrom: chr3
strand: -
right_annotated: ENSG00000221955.10:SLC12A8:protein_coding:5586
samples:
,0:2584,1:316,2:40225,3:47585,4:20296,5:39524,6:25019,7:27872,8:31991,9:23254,10:72488,11:46334,12:25897,13:24513,14:22630,15:23097,16:32768,17:18735


chrom: chr3
strand: -
right_annotated: ENSG00000163848.19:ZNF148:protein_coding:10574
samples:
,0:88520,1:26646,2:771514,3:1149955,4:933794,5:1708984,6:951276,7:1206436,8:942532,9:996199,10:3708244,11:3482502,12:3322690,13:3238480,14:3360070,15:2213412,16:3028089,17:1633337


chrom: chr3
strand: -
right_annotated: ENSG00000243508.1:RP11-775J23.2:processed_pseudogene:713
samples:
,0:42,3:123,6:94,7:145,8:203,10:13055,11:28061,12:10675,13:14430,14:15622,15:27258,16:15806,17:15371


chrom: chr3
strand: -
right_annotated: ENSG00000114520.10:SNX4:protein_coding:2709
samples:
,0:47277,1:27407,2:665984,3:784047,4:567461,5:1002877,6:706076,7:824220,8:680321,9:607398,10:1402830,11:789759,12:892981,13:902148,14:957767,15:486363,16:873424,17:399980


chrom: chr3
strand: -
right_annotated: ENSG00000252965.1:Y_RNA:misc_RNA:106
samples:
,2:855,3:872,4:292,5:1152,6:23,7:838,8:394,9:472,10:981,11:1117,12:353,13:911,14:670,15:740,16:847,17:102


chrom: chr3
strand: -
right_annotated: ENSG00000144909.7:OSBPL11:protein_coding:4191
samples:
,0:28615,1:14988,2:350115,3:463042,4:313659,5:684736,6:351100,7:486999,8:423075,9:338970,10:695017,11:496555,12:631321,13:552312,14:608614,15:361398,16:585376,17:257594


chrom: chr3
strand: +
right_annotated: ENSG00000243429.1:OR7E29P:unprocessed_pseudogene:907
samples:
,2:742,3:1209,4:1097,5:1590,6:400,7:1441,8:2109,9:333,10:1098,11:1053,12:2076,13:944,14:1076,15:825,16:100,17:202


chrom: chr3
strand: +
right_annotated: ENSG00000272840.1:RP11-379B18.6:lincRNA:373
samples:
,2:100,3:448,4:20,5:439,6:312,7:229,8:310,9:84,10:2620,11:1309,12:19,13:563,14:508,15:1879,16:195,17:922


chrom: chr3
strand: -
right_annotated: ENSG00000239804.1:RP11-379B18.1:processed_pseudogene:259
samples:
,2:100,3:954,4:526,5:805,6:444,7:4510,8:1973,9:2631,10:2017,11:1499,12:237,13:598,14:521,15:2025,16:2806,17:1073


chrom: chr3
strand: +
right_annotated: ENSG00000242229.1:RPS3AP14:processed_pseudogene:780
samples:
,0:250,1:101,2:525,3:1009,4:747,5:908,6:611,7:2190,8:882,9:1780,10:5999,11:4358,12:620,13:1356,14:1611,15:6720,16:3972,17:2511


chrom: chr3
strand: -
right_annotated: ENSG00000241288.7:RP11-379B18.5:processed_transcript:6732
samples:
,0:4629,1:93,2:19712,3:32840,4:7879,5:37270,6:26320,7:69960,8:34671,9:41083,10:56797,11:50793,12:28718,13:47403,14:54540,15:118626,16:97128,17:56904


chrom: chr3
strand: +
right_annotated: ENSG00000241278.1:ENPP7P4:unprocessed_pseudogene:1086
samples:
,0:1534,1:33,2:15695,3:11334,4:2254,5:11072,6:7282,7:18783,8:14625,9:13275,10:26334,11:16950,12:8906,13:13680,14:11837,15:26001,16:26643,17:16494


chrom: chr3
strand: -
right_annotated: ENSG00000248787.1:RP11-666A20.4:lincRNA:427
samples:
,0:909,1:51,2:888,3:1509,4:348,5:1634,6:1703,7:3335,8:1973,9:1497,10:3401,11:3624,12:2751,13:4720,14:4271,15:6794,16:5991,17:5594


chrom: chr3
strand: +
right_annotated: ENSG00000171084.15:FAM86JP:transcribed_unprocessed_pseudogene:2519
samples:
,0:6081,1:2384,2:10891,3:18317,4:6026,5:14768,6:15248,7:15813,8:27029,9:28818,10:15271,11:23361,12:12350,13:13835,14:21705,15:26314,16:40267,17:24013


chrom: chr3
strand: -
right_annotated: ENSG00000189366.9:ALG1L:protein_coding:843
samples:
,0:1549,1:639,2:3486,3:12741,4:4733,5:11100,6:11018,7:11023,8:23202,9:11851,10:6007,11:11624,12:5570,13:7760,14:4796,15:7433,16:20752,17:8443


chrom: chr3
strand: +
right_annotated: ENSG00000114547.9:ROPN1B:protein_coding:4048
samples:
,2:4511,3:11957,4:11179,5:10191,6:20293,7:13047,8:21374,9:23401,10:16440,11:39945,12:27406,13:16833,14:31640,15:29158,16:45268,17:26155


chrom: chr3
strand: -
right_annotated: ENSG00000114544.16:SLC41A3:protein_coding:6592
samples:
,0:31827,1:7688,2:938012,3:906518,4:642338,5:1367477,6:1086743,7:1286789,8:1425238,9:760756,10:787573,11:562488,12:458690,13:584837,14:541398,15:487640,16:784045,17:341393


chrom: chr3
strand: +
right_annotated: ENSG00000250012.1:RP11-124N2.1:antisense:645
samples:
,1:55,2:8428,3:2877,4:18045,5:3334,6:7059,7:3528,8:4345,9:7299,10:4523,11:2940,12:4637,13:2507,14:6070,15:2518,16:6025,17:6187


chrom: chr3
strand: -
right_annotated: ENSG00000144908.13:ALDH1L1:protein_coding:13712
samples:
,0:204,1:405,2:3098,3:2599,4:3961,5:7609,6:14585,7:14445,8:46826,9:35896,10:3049,11:5589,12:3959,13:5558,14:16110,15:6915,16:38930,17:21291


chrom: chr3
strand: +
right_annotated: ENSG00000250218.1:ALDH1L1-AS1:antisense:437
samples:
,0:27,1:24,2:376,3:92,4:93,5:498,6:702,7:721,8:722,9:1519,10:769,11:514,12:37,13:69,14:314,15:289,16:1269,17:645


chrom: chr3
strand: +
right_annotated: ENSG00000246022.2:ALDH1L1-AS2:antisense:2719
samples:
,0:128,2:2124,3:6984,4:2785,5:7040,6:4791,7:4990,8:7929,9:5036,10:400,11:1135,12:717,13:1013,14:1268,15:1024,16:3043,17:2742


chrom: chr3
strand: +
right_annotated: ENSG00000250934.1:RP11-71E19.1:lincRNA:795
samples:
,2:2562,3:997,4:3294,5:5523,6:8198,7:4498,8:9481,9:9195,10:2507,11:849,12:3541,13:1962,14:6796,15:1680,16:5301,17:3623


chrom: chr3
strand: -
right_annotated: ENSG00000251448.1:RP11-71E19.2:lincRNA:254
samples:
,2:176,3:142,4:113,5:480,6:407,7:822,8:753,9:568,10:70,11:166,12:155,13:68,14:596,15:60,16:512,17:380


chrom: chr3
strand: -
right_annotated: ENSG00000163884.3:KLF15:protein_coding:2848
samples:
,0:1431,1:821,2:111531,3:35019,4:52162,5:41892,6:40327,7:21025,8:53252,9:17312,10:93511,11:30701,12:28766,13:35209,14:21305,15:13872,16:33794,17:20232


chrom: chr3
strand: -
right_annotated: ENSG00000249833.5:CCDC37-AS1:antisense:986
samples:
,2:2347,3:356,4:1596,5:516,6:1373,7:214,8:1556,9:588,10:1133,11:614,12:1977,13:2065,14:929,15:1109,16:1347,17:1381


chrom: chr3
strand: +
right_annotated: ENSG00000163885.11:CFAP100:protein_coding:3352
samples:
,0:107,2:34386,3:33065,4:33225,5:50213,6:44697,7:46612,8:65453,9:57417,10:28440,11:32833,12:27200,13:43661,14:32066,15:48573,16:48959,17:45881


chrom: chr3
strand: -
right_annotated: ENSG00000279328.1:RP11-203H19.2:TEC:1774
samples:
,0:102,2:9637,3:9725,4:5020,5:14763,6:10491,7:17505,8:15557,9:12987,10:11394,11:13335,12:6307,13:10617,14:8615,15:15720,16:8764,17:9400


chrom: chr3
strand: -
right_annotated: ENSG00000070476.14:ZXDC:protein_coding:7357
samples:
,0:14603,1:7104,2:684445,3:651694,4:517418,5:1064288,6:692928,7:805794,8:720300,9:407849,10:830507,11:720504,12:680428,13:709326,14:677590,15:573954,16:709054,17:375222


chrom: chr3
strand: -
right_annotated: ENSG00000159650.8:UROC1:protein_coding:3329
samples:
,2:4131,3:1713,4:4429,5:3288,6:4941,7:2755,8:4865,9:3653,10:1461,11:2018,12:1751,13:2867,14:878,15:2609,16:2236,17:3365


chrom: chr3
strand: +
right_annotated: ENSG00000180767.9:CHST13:protein_coding:1789
samples:
,1:281,2:604,3:202,4:1047,5:404,6:1199,7:43,8:757,9:808,10:339,11:202,12:405,13:1018,14:1453,15:202,16:1032,17:2639


chrom: chr3
strand: -
right_annotated: ENSG00000180697.8:C3orf22:protein_coding:2187
samples:
,2:262,3:1722,4:906,5:1283,6:2123,7:1044,8:645,9:1659,10:1556,11:1492,12:2043,13:1924,14:2033,15:966,16:799,17:1377


chrom: chr3
strand: -
right_annotated: ENSG00000283374.1:TXNRD3NB:protein_coding:1134
samples:
,0:1972,1:1144,2:6969,3:9242,4:5696,5:12063,6:9473,7:10401,8:8074,9:8742,10:19439,11:15349,12:10310,13:9391,14:14648,15:10057,16:18115,17:9392


chrom: chr3
strand: -
right_annotated: ENSG00000206483.5:TXNRD3NB:protein_coding:738
samples:
,2:1935,3:3202,4:1567,5:2186,6:2631,7:3151,8:2310,9:3522,10:2046,11:3101,12:1439,13:1702,14:4390,15:2847,16:3634,17:2633


chrom: chr3
strand: -
right_annotated: ENSG00000197763.13:TXNRD3:protein_coding:3055
samples:
,0:14713,1:6219,2:34787,3:39774,4:29597,5:56738,6:38745,7:49948,8:44592,9:39999,10:141529,11:99405,12:94815,13:80221,14:103831,15:72840,16:112966,17:58400


chrom: chr3
strand: +
right_annotated: ENSG00000248557.1:RP11-390G14.1:processed_pseudogene:528
samples:
,1:73,2:1593,3:1529,4:2958,5:6134,6:3812,7:4235,8:2917,9:2832,10:5795,11:6947,12:6953,13:4615,14:6698,15:7955,16:4647,17:5290


chrom: chr3
strand: +
right_annotated: ENSG00000159685.10:CHCHD6:protein_coding:2763
samples:
,0:13795,1:11565,2:303305,3:242159,4:268916,5:356568,6:554638,7:322743,8:547139,9:312097,10:322252,11:206897,12:287362,13:278835,14:302789,15:194340,16:411488,17:227627


chrom: chr3
strand: -
right_annotated: ENSG00000249558.1:RCC2P4:processed_pseudogene:1042
samples:
,0:530,1:250,2:300,3:1617,6:96,7:980,8:100,10:5919,11:14486,12:4267,13:5035,14:4622,15:11800,16:5719,17:5190


chrom: chr3
strand: +
right_annotated: ENSG00000280053.1:RP11-61K12.2:TEC:3362
samples:
,2:23206,3:36022,4:27126,5:49383,6:26998,7:66147,8:40575,9:41073,10:15749,11:28884,12:22215,13:30821,14:18287,15:43279,16:26467,17:23366


chrom: chr3
strand: +
right_annotated: ENSG00000114554.11:PLXNA1:protein_coding:10944
samples:
,0:115387,1:30945,2:8282091,3:3574935,4:4631674,5:5110408,6:6863460,7:3150953,8:5338203,9:3944194,10:3029122,11:2557368,12:2855319,13:2587347,14:2818927,15:1999339,16:3041492,17:3264698


chrom: chr3
strand: -
right_annotated: ENSG00000244215.1:RP11-88I21.2:lincRNA:927
samples:
,2:901,3:2770,4:1267,5:3795,6:2423,7:3757,8:3698,9:1443,10:455,11:1025,12:455,13:1264,14:1749,15:1656,16:2312,17:1216


chrom: chr3
strand: -
right_annotated: ENSG00000282860.1:RP11-153F10.2:lincRNA:607
samples:
,2:1000,3:2853,4:2577,5:3776,6:1074,7:3785,8:3093,9:1069,10:7209,11:5244,12:9680,13:6884,14:8614,15:6938,16:9588,17:5838


chrom: chr3
strand: -
right_annotated: ENSG00000163870.14:TPRA1:protein_coding:3596
samples:
,0:47213,1:18064,2:247994,3:182107,4:223607,5:244010,6:291225,7:232180,8:333404,9:132919,10:258616,11:141259,12:154990,13:181056,14:135762,15:107216,16:216587,17:104499


chrom: chr3
strand: -
right_annotated: ENSG00000275067.1:MIR6825:miRNA:66
samples:
,0:51,2:536,3:102,4:683,5:572,6:321,7:746,8:1129,9:490,10:209,11:6,12:429,13:699,14:555,15:359,16:1536,17:629


chrom: chr3
strand: +
right_annotated: ENSG00000073111.13:MCM2:protein_coding:4902
samples:
,0:111351,1:163025,2:1734876,3:1014448,4:646755,5:1168864,6:550902,7:442822,8:496041,9:143671,10:2327658,11:759513,12:705074,13:692470,14:330697,15:200664,16:341734,17:87360


chrom: chr3
strand: +
right_annotated: ENSG00000114631.10:PODXL2:protein_coding:2186
samples:
,0:2277,1:7788,2:4265712,3:2831615,4:3130353,5:3870085,6:4963447,7:2917169,8:4162108,9:2737431,10:2721003,11:1859840,12:2399769,13:2489256,14:2607810,15:1278352,16:2733478,17:1511927


chrom: chr3
strand: +
right_annotated: ENSG00000114626.17:ABTB1:protein_coding:6149
samples:
,0:5292,1:2139,2:431919,3:314482,4:159013,5:209150,6:265946,7:164661,8:239328,9:177896,10:224657,11:173974,12:105226,13:141132,14:99764,15:85446,16:106852,17:119404


chrom: chr3
strand: -
right_annotated: ENSG00000074416.13:MGLL:protein_coding:10102
samples:
,0:167424,1:44705,2:1811064,3:1262703,4:809192,5:1985107,6:1560477,7:1320770,8:1994236,9:1539268,10:1100548,11:897591,12:584683,13:946510,14:873336,15:651081,16:1281239,17:801674


chrom: chr3
strand: +
right_annotated: ENSG00000187715.13:KBTBD12:protein_coding:5818
samples:
,1:51,2:16318,3:17414,4:17631,5:40358,6:32223,7:31411,8:42547,9:13201,10:29339,11:41274,12:38984,13:36159,14:42613,15:27853,16:64174,17:18686


chrom: chr3
strand: +
right_annotated: ENSG00000058262.9:SEC61A1:protein_coding:4697
samples:
,0:799978,1:131562,2:2310225,3:2374941,4:1765208,5:3316898,6:2713256,7:2168754,8:2557542,9:1538715,10:2371676,11:1484320,12:1687745,13:1446913,14:1616968,15:911505,16:1660498,17:816434


chrom: chr3
strand: -
right_annotated: ENSG00000175792.11:RUVBL1:protein_coding:6860
samples:
,0:179149,1:128338,2:1025367,3:940103,4:705937,5:1217355,6:984852,7:720230,8:922597,9:601616,10:1238512,11:664837,12:848931,13:646552,14:786872,15:379554,16:704527,17:315005


chrom: chr3
strand: +
right_annotated: ENSG00000239608.1:RUVBL1-AS1:antisense:588
samples:
,2:1100,3:1020,4:410,5:683,6:2450,7:719,8:1821,9:1473,10:5649,11:5378,12:5913,13:5747,14:5259,15:4399,16:4142,17:4342


chrom: chr3
strand: +
right_annotated: ENSG00000132394.10:EEFSEC:protein_coding:2421
samples:
,0:3501,1:1467,2:452987,3:321256,4:273225,5:414114,6:474776,7:285409,8:452853,9:211544,10:169125,11:193328,12:129191,13:200221,14:180607,15:141563,16:191396,17:123817


chrom: chr3
strand: -
right_annotated: ENSG00000179407.3:DNAJB8:protein_coding:3645
samples:
,2:289,3:447,4:396,5:605,6:600,7:544,8:200,9:606,10:599,11:1009,13:1210,14:392,15:1444,16:900,17:798


chrom: chr3
strand: -
right_annotated: ENSG00000179348.11:GATA2:protein_coding:4459
samples:
,0:44986,1:968,2:14133,3:9540,4:9482,5:18253,6:19817,7:12768,8:30278,9:15824,10:4569,11:5522,12:5021,13:7882,14:6437,15:7081,16:11797,17:7411


chrom: chr3
strand: +
right_annotated: ENSG00000244300.2:GATA2-AS1:antisense:2283
samples:
,0:19799,1:459,2:3800,3:1333,4:1702,5:906,6:3174,7:1673,8:2978,9:1675,10:1694,11:1372,12:1063,13:1843,14:2697,15:2952,16:819,17:2693


chrom: chr3
strand: +
right_annotated: ENSG00000239405.1:TMED10P2:processed_pseudogene:612
samples:
,0:499,2:65,3:500,5:497,6:445,7:145,8:774,9:202,10:820,11:334,12:496,13:590,14:733,15:702,16:519,17:390


chrom: chr3
strand: -
right_annotated: ENSG00000163902.11:RPN1:protein_coding:3992
samples:
,0:496089,1:178588,2:1568585,3:1446764,4:1092222,5:1973442,6:1534143,7:1370499,8:1590455,9:1085467,10:2122784,11:1161541,12:1466836,13:1477072,14:1422180,15:675765,16:1460245,17:646972


chrom: chr3
strand: -
right_annotated: ENSG00000277250.1:Metazoa_SRP:misc_RNA:341
samples:
,2:665,3:258,4:53,5:551,6:842,7:1159,8:236,9:950,10:4203,11:537,12:2471,13:3491,14:1588,15:4508,16:5704,17:1315


chrom: chr3
strand: -
right_annotated: ENSG00000242551.2:POU5F1P6:unprocessed_pseudogene:990
samples:
,1:102,2:1140,3:1734,4:646,5:2269,6:1606,7:4500,8:3193,9:2625,10:13207,11:4138,12:10992,13:11238,14:4550,15:15129,16:21844,17:7756


chrom: chr3
strand: +
right_annotated: ENSG00000075785.12:RAB7A:protein_coding:2717
samples:
,0:50384,1:17275,2:1955670,3:1936032,4:1987032,5:3044384,6:2627849,7:2213977,8:3046039,9:2311229,10:665581,11:668193,12:847435,13:1115659,14:1041692,15:913386,16:911279,17:898218


chrom: chr3
strand: -
right_annotated: ENSG00000239503.1:MARK2P8:processed_pseudogene:952
samples:
,0:102,3:606,4:200,5:303,9:202,10:14875,11:23509,12:9250,13:13507,14:11225,15:19449,16:13296,17:7794


chrom: chr3
strand: -
right_annotated: ENSG00000242992.3:FTH1P4:processed_pseudogene:553
samples:
,0:385,1:249,2:688,3:803,4:498,5:1036,6:1615,7:469,8:2177,9:499,10:2399,11:7435,12:3714,13:4781,14:5795,15:10806,16:6310,17:5449


chrom: chr3
strand: -
right_annotated: ENSG00000239483.1:RPS15AP16:processed_pseudogene:361
samples:
,0:74,2:959,3:2151,4:1694,5:1681,6:1248,7:2573,8:2926,9:2787,10:6620,11:8094,12:7820,13:5488,14:6293,15:9482,16:4765,17:2779


chrom: chr3
strand: -
right_annotated: ENSG00000244065.1:MARK2P17:processed_pseudogene:841
samples:
,2:890,3:652,4:200,5:723,6:200,7:647,8:200,9:41,10:375,11:1576,12:646,13:1772,14:990,15:1776,16:800,17:808


chrom: chr3
strand: -
right_annotated: ENSG00000261159.1:RP11-723O4.9:lincRNA:811
samples:
,0:102,1:102,2:19745,3:20530,4:13335,5:13139,6:11992,7:13535,8:15458,9:10398,10:14596,11:9742,12:11101,13:7086,14:9643,15:7223,16:9307,17:7332


chrom: chr3
strand: -
right_annotated: ENSG00000231305.3:RP11-723O4.2:antisense:1456
samples:
,0:763,1:408,2:38717,3:53305,4:22095,5:41189,6:23639,7:28644,8:27088,9:29586,10:37891,11:24826,12:21908,13:26394,14:15977,15:17350,16:19058,17:16397


chrom: chr3
strand: +
right_annotated: ENSG00000250796.1:RP11-723O4.3:processed_pseudogene:329
samples:
,2:3875,3:8170,4:1881,5:6782,6:2358,7:5453,8:3770,9:4986,10:6939,11:5980,12:5860,13:4639,14:1710,15:1818,16:3657,17:2445


chrom: chr3
strand: +
right_annotated: ENSG00000177646.18:ACAD9:protein_coding:4327
samples:
,0:48777,1:30833,2:499811,3:446851,4:290800,5:582172,6:566106,7:507622,8:577030,9:370073,10:538685,11:328537,12:390161,13:376795,14:414378,15:298876,16:471939,17:215537


chrom: chr3
strand: -
right_annotated: ENSG00000114656.10:KIAA1257:protein_coding:7811
samples:
,0:2661,1:1707,2:45107,3:36891,4:24765,5:38535,6:57800,7:40309,8:59823,9:43678,10:52705,11:35923,12:33142,13:36687,14:40680,15:29313,16:46643,17:42195


chrom: chr3
strand: -
right_annotated: ENSG00000187695.7:RP11-723O4.6:protein_coding:2660
samples:
,0:2778,1:2026,2:38836,3:30169,4:23267,5:38777,6:49659,7:33849,8:48429,9:27482,10:51190,11:42157,12:41890,13:45038,14:38577,15:36435,16:43956,17:26191


chrom: chr3
strand: -
right_annotated: ENSG00000279507.1:RP11-723O4.7:TEC:228
samples:
,2:1345,3:2762,4:2224,5:3083,6:2740,7:2119,8:2389,9:2058,10:6323,11:5289,12:5972,13:4336,14:6340,15:5679,16:4701,17:2945


chrom: chr3
strand: +
right_annotated: ENSG00000114654.7:EFCC1:protein_coding:2945
samples:
,2:3439,3:1968,4:1959,5:4488,6:5225,7:1745,8:10542,9:3250,10:1794,11:3799,12:1400,13:2300,14:4997,15:867,16:6283,17:2725


chrom: chr3
strand: -
right_annotated: ENSG00000172780.16:RAB43:protein_coding:4991
samples:
,0:42974,1:5845,2:90688,3:90634,4:62966,5:141572,6:121640,7:124328,8:130424,9:116135,10:78851,11:53589,12:41205,13:66898,14:52959,15:52900,16:79732,17:57695


chrom: chr3
strand: -
right_annotated: ENSG00000261796.1:ISY1-RAB43:protein_coding:4868
samples:
,0:81548,1:20638,2:243643,3:301522,4:212109,5:468878,6:297965,7:345895,8:353997,9:251281,10:339686,11:190458,12:276204,13:262022,14:273255,15:172333,16:274698,17:116066


chrom: chr3
strand: +
right_annotated: ENSG00000273174.1:RP11-434H6.6:antisense:565
samples:
,1:102,2:667,3:2259,4:533,5:1850,6:1559,7:2810,8:2681,9:651,10:4486,11:2065,12:4787,13:3421,14:4407,15:2631,16:4776,17:2294


chrom: chr3
strand: -
right_annotated: ENSG00000240682.9:ISY1:protein_coding:4102
samples:
,0:60602,1:24381,2:279583,3:359668,4:260708,5:509650,6:350970,7:373388,8:386766,9:224629,10:429724,11:243516,12:354304,13:314187,14:335973,15:202139,16:334264,17:112033


chrom: chr3
strand: -
right_annotated: ENSG00000273437.1:RP11-434H6.7:lincRNA:335
samples:
,0:102,2:2265,3:8880,4:3543,5:7527,6:4546,7:8636,8:5108,9:4276,10:16249,11:11483,12:12787,13:12241,14:18138,15:11137,16:14276,17:10515


chrom: chr3
strand: -
right_annotated: ENSG00000169714.16:CNBP:protein_coding:1927
samples:
,0:326688,1:224655,2:1905054,3:2291283,4:1474200,5:3113764,6:1830685,7:2055398,8:2029739,9:1289121,10:3406476,11:1578166,12:2133590,13:1786309,14:1980660,15:972170,16:1991945,17:682497


chrom: chr3
strand: +
right_annotated: ENSG00000181789.14:COPG1:protein_coding:4425
samples:
,0:336211,1:66536,2:1400294,3:1587940,4:1103742,5:2176917,6:1694049,7:1703155,8:1936283,9:1405806,10:2020112,11:1311386,12:1600398,13:1078856,14:1646880,15:837685,16:1608404,17:819927


chrom: chr3
strand: +
right_annotated: ENSG00000278658.1:MIR6826:miRNA:98
samples:
,0:44,1:13,2:168,3:583,4:135,5:634,6:175,7:578,8:314,9:356,10:1507,11:715,12:920,13:838,14:597,15:1190,16:692,17:1073


chrom: chr3
strand: +
right_annotated: ENSG00000183624.13:HMCES:protein_coding:2783
samples:
,0:33378,1:25790,2:307902,3:404664,4:293321,5:550880,6:432141,7:515667,8:558184,9:328333,10:347651,11:229399,12:320046,13:217864,14:323947,15:205989,16:332425,17:147246


chrom: chr3
strand: -
right_annotated: ENSG00000184897.5:H1FX:protein_coding:1507
samples:
,0:51344,1:28107,2:4310726,3:1573539,4:3927887,5:2100897,6:3631324,7:1198082,8:2362301,9:572931,10:1424167,11:710812,12:1004510,13:1235608,14:989973,15:569294,16:969768,17:589049


chrom: chr3
strand: +
right_annotated: ENSG00000206417.8:H1FX-AS1:antisense:3420
samples:
,0:13719,1:6181,2:1509938,3:475399,4:1211557,5:699337,6:1325062,7:425400,8:805076,9:222633,10:479895,11:188349,12:393166,13:338597,14:396223,15:204785,16:372917,17:176480


chrom: chr3
strand: -
right_annotated: ENSG00000248916.1:NUP210P3:unprocessed_pseudogene:388
samples:
,0:51,2:2599,3:1716,4:2039,5:2531,6:2096,7:2485,8:2784,9:1506,10:1472,11:1724,12:1028,13:1166,14:2163,15:1127,16:1513,17:1371


chrom: chr3
strand: +
right_annotated: ENSG00000270492.1:RP13-685P2.8:processed_pseudogene:489
samples:
,2:802,3:3039,4:2816,5:3131,6:3706,7:3672,8:2831,9:2937,10:779,11:1454,12:2763,13:997,14:3700,15:1809,16:1375,17:1788


chrom: chr3
strand: +
right_annotated: ENSG00000270773.1:RP13-685P2.7:processed_pseudogene:754
samples:
,1:131,2:1587,3:3457,4:4096,5:2623,6:2873,7:7392,8:2125,9:6248,10:687,11:2313,12:2194,13:420,14:2933,15:3599,16:1286,17:3121


chrom: chr3
strand: +
right_annotated: ENSG00000244932.2:RP11-529F4.1:unprocessed_pseudogene:517
samples:
,0:1119,1:717,2:25903,3:23664,4:22388,5:34404,6:20752,7:23440,8:31792,9:25017,10:33868,11:24934,12:22857,13:25536,14:21808,15:22255,16:26831,17:14596


chrom: chr3
strand: -
right_annotated: ENSG00000251474.6:RPL32P3:transcribed_unprocessed_pseudogene:4504
samples:
,0:4861,1:6408,2:307518,3:303611,4:295501,5:404823,6:328241,7:308512,8:356033,9:243234,10:352948,11:297103,12:316226,13:279096,14:297511,15:271369,16:316811,17:156036


chrom: chr3
strand: -
right_annotated: ENSG00000207088.1:SNORA7B:snoRNA:139
samples:
,0:17741,1:14140,2:288,3:514,4:389,5:614,6:260,7:237,8:274,9:177,10:42064,11:21150,12:21025,13:34673,14:21957,15:11107,16:36915,17:13335


chrom: chr3
strand: -
right_annotated: ENSG00000172771.11:EFCAB12:protein_coding:7789
samples:
,0:96,1:636,2:7569,3:9028,4:9041,5:15725,6:16674,7:11442,8:21247,9:15593,10:6005,11:6015,12:6816,13:9302,14:12016,15:11836,16:11657,17:9334


chrom: chr3
strand: -
right_annotated: ENSG00000129071.9:MBD4:protein_coding:3356
samples:
,0:35860,1:28193,2:332106,3:393744,4:263449,5:553004,6:315110,7:414990,8:439543,9:333458,10:537240,11:307806,12:383515,13:346007,14:428589,15:217911,16:417101,17:157736


chrom: chr3
strand: +
right_annotated: ENSG00000163913.11:IFT122:protein_coding:9636
samples:
,0:34864,1:20427,2:589853,3:383855,4:255036,5:633567,6:344629,7:407740,8:492665,9:407148,10:750457,11:302098,12:337416,13:390835,14:321371,15:254250,16:421057,17:251523


chrom: chr3
strand: +
right_annotated: ENSG00000163914.4:RHO:protein_coding:2592
samples:
,1:102,2:3167,3:2185,4:1597,5:1406,6:798,7:1916,8:2499,9:202,10:578,11:404,12:896,13:2358,15:805,16:869,17:202


chrom: chr3
strand: -
right_annotated: ENSG00000004399.12:PLXND1:protein_coding:9738
samples:
,0:67601,1:21698,2:899200,3:234284,4:227351,5:812705,6:281337,7:641161,8:1143668,9:407736,10:414186,11:112849,12:103247,13:322672,14:103872,15:324848,16:488177,17:235004


chrom: chr3
strand: +
right_annotated: ENSG00000239437.3:RN7SL752P:misc_RNA:287
samples:
,0:100792,1:62030,2:569,3:2911,5:1828,6:298,7:9453,8:289,9:467,10:1626138,11:809950,12:1388510,13:1014836,14:1543234,15:669949,16:1485452,17:316264


chrom: chr3
strand: -
right_annotated: ENSG00000172765.16:TMCC1:protein_coding:7819
samples:
,0:15494,1:17418,2:728703,3:922590,4:784980,5:1327611,6:1037527,7:1272671,8:1281520,9:1216924,10:1005254,11:1056588,12:1152880,13:1180722,14:1500589,15:1112832,16:1526039,17:932520


chrom: chr3
strand: -
right_annotated: ENSG00000203644.3:RP11-332M2.1:sense_intronic:910
samples:
,0:927,1:958,2:11965,3:18045,4:11808,5:32876,6:12908,7:25921,8:12651,9:10742,10:46736,11:44942,12:27860,13:31654,14:32890,15:37674,16:36634,17:21556


chrom: chr3
strand: +
right_annotated: ENSG00000271270.5:TMCC1-AS1:antisense:4623
samples:
,0:2650,1:4052,2:64456,3:71833,4:66217,5:106025,6:106035,7:93079,8:106589,9:118257,10:140484,11:74557,12:121840,13:83801,14:152734,15:63412,16:136426,17:80464


chrom: chr3
strand: +
right_annotated: ENSG00000170893.3:TRH:protein_coding:1978
samples:
,2:78440,3:75622,4:101190,5:65510,6:209169,7:37376,8:48905,9:114589,10:39711,11:42411,12:46616,13:23359,14:90646,15:16353,16:24536,17:54138


chrom: chr3
strand: +
right_annotated: ENSG00000251287.8:ALG1L2:protein_coding:1499
samples:
,0:564,1:102,2:2158,3:3843,4:2494,5:4596,6:3399,7:2459,8:2666,9:1306,10:6042,11:4767,12:5216,13:4422,14:4970,15:5754,16:6178,17:3070


chrom: chr3
strand: -
right_annotated: ENSG00000248243.1:RP11-93K22.13:lincRNA:713
samples:
,2:755,3:1006,4:499,5:363,6:915,7:343,8:252,9:674,10:271,11:374,12:123,13:373,14:1066,15:886,16:247,17:270


chrom: chr3
strand: -
right_annotated: ENSG00000253540.5:FAM86HP:transcribed_unprocessed_pseudogene:1301
samples:
,0:2662,1:603,2:21096,3:21484,4:5473,5:13932,6:9136,7:8713,8:17120,9:8315,10:14385,11:15259,12:6081,13:9874,14:8898,15:7554,16:12572,17:8188


chrom: chr3
strand: +
right_annotated: ENSG00000249846.6:RP11-77P16.4:lincRNA:1974
samples:
,0:908,1:51,2:4456,3:7454,4:3518,5:5425,6:6307,7:4877,8:4800,9:5445,10:18126,11:12462,12:11650,13:6209,14:10293,15:6038,16:6248,17:6380


chrom: chr3
strand: +
right_annotated: ENSG00000228252.8:COL6A4P2:unitary_pseudogene:3814
samples:
,2:4959,3:24922,4:3650,5:4494,6:8548,7:6284,8:8722,9:13665,10:9646,11:10068,12:3089,13:877,14:6879,15:3009,16:5062,17:4419


chrom: chr3
strand: +
right_annotated: ENSG00000206384.10:COL6A6:protein_coding:9720
samples:
,0:611,1:368,2:1726,3:4863,4:3076,5:3730,6:1624,7:6262,8:7722,9:4551,10:21269,11:42808,12:23753,13:14534,14:18883,15:30575,16:39526,17:18213


chrom: chr3
strand: -
right_annotated: ENSG00000196455.7:PIK3R4:protein_coding:5376
samples:
,0:34531,1:17588,2:292030,3:357282,4:262067,5:538678,6:281911,7:375413,8:318151,9:244400,10:838663,11:564282,12:526803,13:493435,14:522385,15:331578,16:524100,17:210693


chrom: chr3
strand: +
right_annotated: ENSG00000017260.19:ATP2C1:protein_coding:8533
samples:
,0:221822,1:32764,2:1367791,3:2417138,4:1444911,5:3394455,6:1848403,7:3146255,8:2509139,9:2151854,10:2889929,11:2719682,12:2663227,13:2648800,14:2888845,15:2200857,16:3106452,17:1644669


chrom: chr3
strand: -
right_annotated: ENSG00000249098.1:RP11-39E3.4:processed_pseudogene:572
samples:
,0:51,1:29,2:136,3:160,5:101,6:365,7:98,8:192,10:13832,11:17159,12:15384,13:9203,14:11356,15:10894,16:15275,17:6132


chrom: chr3
strand: -
right_annotated: ENSG00000034533.11:ASTE1:protein_coding:3427
samples:
,0:11674,1:4512,2:164753,3:236027,4:142909,5:331484,6:182343,7:266857,8:249226,9:183065,10:327799,11:267504,12:252925,13:275599,14:265861,15:169755,16:305520,17:127792


chrom: chr3
strand: +
right_annotated: ENSG00000114670.13:NEK11:protein_coding:5355
samples:
,0:9553,1:3928,2:142047,3:203282,4:118727,5:270669,6:166674,7:197931,8:211374,9:196142,10:283321,11:219578,12:235831,13:216439,14:272441,15:166716,16:318531,17:139474


chrom: chr3
strand: -
right_annotated: ENSG00000250129.5:RP11-265F19.1:antisense:718
samples:
,0:28,1:14,2:535,3:312,5:861,6:384,7:531,8:65,9:406,10:3641,11:6408,12:4106,13:1938,14:2836,15:4040,16:3197,17:3614


chrom: chr3
strand: -
right_annotated: ENSG00000250608.1:RP11-933H2.4:processed_transcript:4200
samples:
,0:102,2:4168,3:4223,4:3029,5:5304,6:2871,7:3992,8:5403,9:6625,10:8405,11:16973,12:6218,13:8773,14:12871,15:15864,16:15136,17:14164


chrom: chr3
strand: +
right_annotated: ENSG00000246082.2:NUDT16P1:transcribed_unitary_pseudogene:2312
samples:
,0:408,1:825,2:1767,3:2841,4:1388,5:676,6:3823,7:2297,8:3490,9:3072,10:8667,11:9308,12:2984,13:7736,14:4351,15:4963,16:7231,17:6002


chrom: chr3
strand: +
right_annotated: ENSG00000198585.11:NUDT16:protein_coding:7029
samples:
,0:69222,1:15061,2:802956,3:751344,4:476723,5:1280927,6:866650,7:883416,8:1050564,9:890441,10:1099610,11:677784,12:745931,13:780346,14:840946,15:563563,16:1010089,17:459604


chrom: chr3
strand: -
right_annotated: ENSG00000261167.1:RP11-517B11.7:sense_overlapping:3473
samples:
,0:1563,1:900,2:25891,3:48719,4:27923,5:58739,6:42224,7:48317,8:49039,9:62858,10:87004,11:99446,12:79008,13:80462,14:95714,15:54034,16:88354,17:66610


chrom: chr3
strand: -
right_annotated: ENSG00000114686.8:MRPL3:protein_coding:2715
samples:
,0:104636,1:76940,2:870819,3:891734,4:702166,5:1300283,6:864830,7:805359,8:928144,9:738084,10:1127769,11:722035,12:837237,13:867669,14:787608,15:415990,16:826231,17:425226


chrom: chr3
strand: -
right_annotated: ENSG00000249020.1:SNORA58:snoRNA:137
samples:
,0:608,1:1235,2:213,3:613,4:586,5:989,6:309,7:470,8:227,9:880,10:1189,11:3189,12:1907,13:1373,14:1653,15:1316,16:791,17:1028


chrom: chr3
strand: -
right_annotated: ENSG00000196353.11:CPNE4:protein_coding:6427
samples:
,0:204,1:1336,2:110483,3:163574,4:45487,5:422846,6:290661,7:162744,8:259326,9:192626,10:39746,11:104301,12:41748,13:198054,14:204966,15:84329,16:158843,17:86794


chrom: chr3
strand: +
right_annotated: ENSG00000240854.1:RP11-64K7.1:processed_pseudogene:1310
samples:
,0:9638,1:5619,3:97,4:288,5:481,6:296,8:218,9:375,10:806,11:393,12:594,13:459,14:198,15:101,16:777,17:201


chrom: chr3
strand: -
right_annotated: ENSG00000242899.1:RPL7P16:processed_pseudogene:738
samples:
,0:131,1:243,2:250,3:684,4:479,5:626,6:257,7:192,8:600,9:312,10:1593,11:379,12:1731,13:1372,14:1688,15:469,16:1743,17:259


chrom: chr3
strand: +
right_annotated: ENSG00000014257.15:ACPP:protein_coding:4193
samples:
,0:663,2:600,3:372,4:785,5:1434,6:1195,7:3635,8:7485,9:248,10:1000,11:402,12:988,13:1050,14:1607,15:3114,16:3792


chrom: chr3
strand: +
right_annotated: ENSG00000240890.2:RP11-65E22.2:processed_pseudogene:2247
samples:
,0:1160,1:610,2:100,3:67,4:293,5:202,7:395,8:77,9:176,10:675,11:616,12:692,13:785,14:296,15:212,16:694,17:597


chrom: chr3
strand: +
right_annotated: ENSG00000138246.15:DNAJC13:protein_coding:9562
samples:
,0:158243,1:42761,2:783500,3:1140990,4:752531,5:1619344,6:871572,7:1230838,8:1004754,9:989133,10:1896936,11:1706095,12:1722948,13:1540573,14:1801636,15:1165513,16:1676164,17:838916


chrom: chr3
strand: -
right_annotated: ENSG00000240303.7:ACAD11:protein_coding:5674
samples:
,0:59465,1:11484,2:472287,3:505089,4:364072,5:547064,6:385157,7:458458,8:497553,9:297746,10:634789,11:412518,12:449577,13:399224,14:414656,15:292242,16:495489,17:230714


chrom: chr3
strand: -
right_annotated: ENSG00000274810.3:NPHP3-ACAD11:protein_coding:8119
samples:
,0:75261,1:14237,2:488450,3:648291,4:376638,5:784194,6:367192,7:647376,8:608488,9:393694,10:947053,11:555738,12:573349,13:540431,14:495123,15:411023,16:657626,17:232224


chrom: chr3
strand: +
right_annotated: ENSG00000129048.6:ACKR4:protein_coding:2273
samples:
,0:11606,1:173,2:17531,3:20493,4:14979,5:23463,6:13693,7:21690,8:19383,9:15315,10:30087,11:37329,12:25700,13:21026,14:26321,15:28325,16:25496,17:16427


chrom: chr3
strand: +
right_annotated: ENSG00000251614.1:HSPA8P19:processed_pseudogene:1517
samples:
,0:204,3:808,4:100,5:507,7:438,9:543,10:6069,11:11184,12:4503,13:5230,14:5615,15:7586,16:5903,17:5793


chrom: chr3
strand: +
right_annotated: ENSG00000081307.12:UBA5:protein_coding:6827
samples:
,0:58878,1:17595,2:638586,3:965972,4:698044,5:1155151,6:704170,7:949980,8:740784,9:755911,10:1123812,11:936315,12:1040018,13:853591,14:946403,15:626387,16:899572,17:530042


chrom: chr3
strand: -
right_annotated: ENSG00000113971.18:NPHP3:protein_coding:9404
samples:
,0:42409,1:7922,2:256385,3:339625,4:213054,5:465538,6:186651,7:366886,8:312973,9:201767,10:593381,11:363805,12:323275,13:357686,14:250104,15:280336,16:398294,17:140245


chrom: chr3
strand: +
right_annotated: ENSG00000248724.6:NPHP3-AS1:antisense:5215
samples:
,0:4622,1:675,2:16584,3:7122,4:14952,5:12028,6:15614,7:9219,8:21895,9:9123,10:20843,11:11789,12:12090,13:14530,14:14229,15:15142,16:26975,17:8610


chrom: chr3
strand: -
right_annotated: ENSG00000249725.1:RP11-469L4.1:lincRNA:384
samples:
,2:504,3:714,4:921,5:1734,6:1392,7:315,8:1742,9:616,10:1488,11:1294,12:2337,13:2822,14:2256,15:1579,16:3280,17:1166


chrom: chr3
strand: +
right_annotated: ENSG00000144868.13:TMEM108:protein_coding:8425
samples:
,2:2431465,3:1975206,4:2245352,5:3197172,6:3176671,7:2156290,8:2924378,9:1708399,10:868962,11:1471438,12:1416379,13:1306963,14:1650631,15:1298249,16:1523535,17:925723


chrom: chr3
strand: -
right_annotated: ENSG00000251011.5:TMEM108-AS1:antisense:2747
samples:
,2:848,3:6749,4:800,5:1570,6:747,7:5008,8:456,9:826,10:211076,11:705264,12:290675,13:226146,14:307137,15:399432,16:317613,17:226087


chrom: chr3
strand: +
right_annotated: ENSG00000170819.4:BFSP2:protein_coding:2070
samples:
,2:994,3:2034,4:1613,5:3723,6:2553,7:1584,8:4223,9:2075,10:1554,11:10734,12:4187,13:3481,14:3321,15:3282,16:6383,17:2234


chrom: chr3
strand: -
right_annotated: ENSG00000272832.1:RP11-91K8.5:lincRNA:403
samples:
,2:1,3:1224,4:100,5:1121,6:340,7:497,8:392,9:757,10:1009,11:1031,12:636,13:64,14:974,15:220,16:923,17:680


chrom: chr3
strand: -
right_annotated: ENSG00000250983.1:RP11-91K8.2:processed_pseudogene:202
samples:
,0:698,1:408,2:3649,3:1358,4:2632,5:4618,6:3592,7:923,8:4050,9:1960,10:7107,11:3367,12:3042,13:5247,14:3968,15:1580,16:6975,17:3788


chrom: chr3
strand: +
right_annotated: ENSG00000091527.15:CDV3:protein_coding:4367
samples:
,0:279597,1:109855,2:1638955,3:2708113,4:1701855,5:2904549,6:1463248,7:2063652,8:1523598,9:1841162,10:3743773,11:2129176,12:2880290,13:1855035,14:2355038,15:1200419,16:1999081,17:1001863


chrom: chr3
strand: -
right_annotated: ENSG00000163781.12:TOPBP1:protein_coding:6515
samples:
,0:60296,1:57972,2:1021506,3:1198575,4:886659,5:1819776,6:1040864,7:1134710,8:1000768,9:994281,10:2096687,11:1389963,12:1626672,13:1372714,14:1634879,15:873722,16:1308700,17:639293


chrom: chr3
strand: +
right_annotated: ENSG00000242337.5:TFP1:transcribed_unprocessed_pseudogene:2318
samples:
,0:96,1:9,2:6862,3:8949,4:10373,5:25825,6:17855,7:29421,8:29177,9:28373,10:24246,11:9541,12:14572,13:24538,14:23579,15:26698,16:44011,17:30713


chrom: chr3
strand: +
right_annotated: ENSG00000252641.2:RNU6-678P:snRNA:109
samples:
,0:12,2:887,3:832,4:1141,5:1127,6:1183,7:758,8:1349,9:1102,10:1935,11:1635,12:1886,13:1350,14:1622,15:1963,16:1875,17:1327


chrom: chr3
strand: +
right_annotated: ENSG00000091513.14:TF:protein_coding:8565
samples:
,1:306,2:48803,3:52540,4:65266,5:117021,6:148250,7:116267,8:159313,9:135975,10:71952,11:37928,12:73141,13:61088,14:118014,15:49132,16:127538,17:78731


chrom: chr3
strand: +
right_annotated: ENSG00000244062.1:RP11-404G16.2:processed_pseudogene:1917
samples:
,2:235,3:199,4:400,5:381,6:200,7:741,8:299,9:746,10:2388,11:1031,12:2631,13:1132,14:3692,15:2321,16:2542,17:3023


chrom: chr3
strand: +
right_annotated: ENSG00000144867.11:SRPRB:protein_coding:4180
samples:
,0:145856,1:57926,2:355279,3:622420,4:340985,5:786452,6:559839,7:709486,8:677497,9:948434,10:634137,11:474998,12:519511,13:440598,14:544753,15:328455,16:555806,17:419636


chrom: chr3
strand: -
right_annotated: ENSG00000154917.10:RAB6B:protein_coding:6005
samples:
,0:1909,1:1426,2:2010809,3:2385344,4:1967764,5:3799699,6:3939280,7:3749337,8:4742320,9:5932967,10:1114168,11:1153978,12:1439864,13:1407948,14:2299836,15:1577509,16:2653943,17:2666274


chrom: chr3
strand: -
right_annotated: ENSG00000221972.3:C3orf36:protein_coding:1668
samples:
,0:102,3:404,4:798,5:202,6:200,7:714,8:1199,9:1179,10:1329,11:611,13:779,14:1200,15:760,16:3250,17:202


chrom: chr3
strand: -
right_annotated: ENSG00000174640.12:SLCO2A1:protein_coding:5283
samples:
,0:273,2:22141,3:41291,4:37470,5:63313,6:56107,7:49352,8:55163,9:81714,10:11343,11:17340,12:11150,13:8623,14:19596,15:19563,16:12149,17:29157


chrom: chr3
strand: -
right_annotated: ENSG00000163785.12:RYK:protein_coding:8047
samples:
,0:86934,1:30831,2:553622,3:658295,4:441848,5:938533,6:413463,7:673778,8:558675,9:346910,10:1136938,11:808153,12:763579,13:804516,14:669385,15:525300,16:791561,17:267059


chrom: chr3
strand: +
right_annotated: ENSG00000231845.3:HMGB3P14:processed_pseudogene:599
samples:
,2:1156,3:202,4:636,5:1639,6:1221,7:1504,8:804,9:1487,10:9711,11:14692,12:9702,13:7980,14:6008,15:11883,16:12520,17:5987


chrom: chr3
strand: +
right_annotated: ENSG00000240006.1:RP11-200A1.1:lincRNA:294
samples:
,0:37,1:120,3:331,4:86,5:368,6:1288,7:418,8:494,9:202,10:197,11:10,13:245,14:137,15:598,16:400,17:86


chrom: chr3
strand: -
right_annotated: ENSG00000260633.1:RP11-375I20.6:lincRNA:1946
samples:
,2:14378,3:9491,4:16095,5:51537,6:36122,7:42178,8:25153,9:18394,10:10897,11:8031,12:19039,13:27747,14:30475,15:34858,16:24512,17:8442


chrom: chr3
strand: -
right_annotated: ENSG00000214289.2:RPL39P5:transcribed_processed_pseudogene:449
samples:
,0:8385,1:2834,2:48063,3:58259,4:44349,5:102861,6:61150,7:105271,8:88045,9:50333,10:63775,11:44325,12:41746,13:60085,14:50822,15:49960,16:66793,17:21861


chrom: chr3
strand: -
right_annotated: ENSG00000114019.14:AMOTL2:protein_coding:5984
samples:
,0:234883,1:79798,2:1572738,3:898011,4:1070064,5:2116999,6:1816299,7:1634985,8:2248585,9:905176,10:1306590,11:810829,12:826800,13:1343442,14:1026886,15:1057017,16:1528820,17:589634


chrom: chr3
strand: -
right_annotated: ENSG00000277723.1:MIR6827:miRNA:59
samples:
,0:254,1:127,2:265,3:30,4:99,5:162,6:48,7:134,8:279,9:39,10:841,11:945,12:496,13:698,14:546,15:386,16:1186,17:562


chrom: chr3
strand: -
right_annotated: ENSG00000129055.12:ANAPC13:protein_coding:2359
samples:
,0:63418,1:23277,2:353045,3:503511,4:281064,5:687203,6:409173,7:542178,8:515644,9:378793,10:595396,11:339428,12:344447,13:395339,14:383380,15:231740,16:368211,17:194869


chrom: chr3
strand: +
right_annotated: ENSG00000182923.16:CEP63:protein_coding:10116
samples:
,0:29090,1:12605,2:619831,3:810579,4:581398,5:976149,6:519298,7:653933,8:572695,9:829085,10:800130,11:730763,12:725329,13:607898,14:584794,15:520568,16:526272,17:461508


chrom: chr3
strand: +
right_annotated: ENSG00000154928.16:EPHB1:protein_coding:6956
samples:
,0:459,2:1868465,3:2364818,4:1360404,5:2337335,6:1173794,7:1472712,8:1421991,9:874251,10:713708,11:1353688,12:856583,13:775619,14:626325,15:818770,16:656139,17:532519


chrom: chr3
strand: -
right_annotated: ENSG00000174611.11:KY:protein_coding:5786
samples:
,0:253,1:7,2:2542,3:3523,4:3264,5:5700,6:7411,7:2353,8:9585,9:7476,10:23163,11:26955,12:11846,13:13035,14:13017,15:12228,16:12969,17:13702


chrom: chr3
strand: -
right_annotated: ENSG00000240086.5:RP11-657O9.1:processed_transcript:1364
samples:
,2:834,3:2018,4:163,5:2532,6:510,7:1380,8:626,9:1753,10:2712,11:3190,12:460,13:2858,14:549,15:1441,16:1590,17:1789


chrom: chr3
strand: +
right_annotated: ENSG00000073711.10:PPP2R3A:protein_coding:7837
samples:
,0:37032,1:2087,2:611137,3:998269,4:802614,5:1505605,6:662359,7:1045916,8:770857,9:773056,10:1508380,11:1506724,12:1558242,13:1309380,14:1341334,15:1230372,16:1322818,17:708331


chrom: chr3
strand: +
right_annotated: ENSG00000227267.3:RP11-305O4.2:processed_pseudogene:581
samples:
,0:306,2:163,4:12,6:100,7:1047,8:317,10:6009,11:7588,12:5953,13:6083,14:4992,15:8189,16:5824,17:3374


chrom: chr3
strand: -
right_annotated: ENSG00000273455.1:RP11-305O4.3:antisense:439
samples:
,0:264,1:31,2:5373,3:9131,4:7419,5:13225,6:7117,7:9650,8:7024,9:7886,10:12436,11:11293,12:18728,13:11277,14:16837,15:16187,16:15787,17:7799


chrom: chr3
strand: -
right_annotated: ENSG00000174579.3:MSL2:protein_coding:5095
samples:
,0:10174,1:4655,2:753692,3:840023,4:697831,5:1306362,6:679842,7:1016464,8:794092,9:552191,10:1249880,11:1058838,12:1214573,13:1005616,14:1141223,15:946316,16:1038877,17:500751


chrom: chr3
strand: +
right_annotated: ENSG00000241438.1:TDGF1P6:processed_pseudogene:448
samples:
,2:970,3:1450,4:821,5:954,6:859,7:2219,8:592,10:4985,11:7019,12:5490,13:3838,14:5930,15:6807,16:3884,17:3622


chrom: chr3
strand: +
right_annotated: ENSG00000114054.13:PCCB:protein_coding:7532
samples:
,0:65184,1:32508,2:521906,3:746983,4:477788,5:838835,6:573376,7:629954,8:582373,9:383934,10:1014528,11:756653,12:814245,13:681043,14:717155,15:402519,16:706722,17:282935


chrom: chr3
strand: -
right_annotated: ENSG00000118007.12:STAG1:protein_coding:7846
samples:
,0:140688,1:36684,2:837094,3:1468346,4:957143,5:1933956,6:983221,7:1264513,8:925335,9:676720,10:2666241,11:1963332,12:2472378,13:1921718,14:2133289,15:1105666,16:1737425,17:579370


chrom: chr3
strand: -
right_annotated: ENSG00000240695.1:RP11-102M11.1:processed_pseudogene:730
samples:
,0:9003,1:4316,2:7025,3:11900,4:10192,5:16622,6:7662,7:11377,8:11513,9:7382,10:48504,11:40160,12:38327,13:32300,14:43916,15:48444,16:34133,17:15629


chrom: chr3
strand: +
right_annotated: ENSG00000261758.1:RP11-102M11.2:antisense:3151
samples:
,0:102,1:204,2:1197,3:606,4:682,5:606,6:1716,7:449,8:1526,9:606,10:5250,11:3632,12:1586,13:7399,14:3497,15:3002,16:4623,17:1802


chrom: chr3
strand: +
right_annotated: ENSG00000168917.8:SLC35G2:protein_coding:4287
samples:
,0:19180,1:9267,2:49831,3:58675,4:51454,5:100571,6:55638,7:112599,8:96933,9:59345,10:102008,11:62716,12:61945,13:63429,14:64035,15:75398,16:104268,17:43417


chrom: chr3
strand: -
right_annotated: ENSG00000273486.1:RP11-731C17.2:antisense:1684
samples:
,0:308,2:13421,3:28040,4:18165,5:28243,6:9852,7:23100,8:24126,9:11603,10:22719,11:28032,12:15490,13:18577,14:17874,15:29164,16:24218,17:14046


chrom: chr3
strand: -
right_annotated: ENSG00000239213.5:NCK1-AS1:antisense:1429
samples:
,0:897,1:184,2:9531,3:23595,4:11941,5:23324,6:7746,7:16354,8:16516,9:7827,10:19553,11:23745,12:18890,13:19533,14:11215,15:18055,16:15090,17:7963


chrom: chr3
strand: +
right_annotated: ENSG00000158092.6:NCK1:protein_coding:3727
samples:
,0:43843,1:17428,2:178274,3:191580,4:147429,5:323486,6:151427,7:241927,8:220892,9:134268,10:360063,11:246988,12:279920,13:268188,14:243348,15:172009,16:255717,17:94455


chrom: chr3
strand: -
right_annotated: ENSG00000214283.4:RAD51AP1P1:processed_pseudogene:1001
samples:
,0:153,2:292,3:373,4:91,5:554,7:95,9:183,10:6360,11:7928,12:3091,13:2983,14:4690,15:5002,16:4170,17:3072


chrom: chr3
strand: +
right_annotated: ENSG00000174564.12:IL20RB:protein_coding:2473
samples:
,0:3587,1:1730,2:25651,3:23981,4:17270,5:39013,6:20911,7:30278,8:27980,9:18256,10:33438,11:21215,12:33928,13:23782,14:28034,15:18702,16:23673,17:9036


chrom: chr3
strand: -
right_annotated: ENSG00000249407.1:IL20RB-AS1:antisense:562
samples:
,0:60,1:24,2:129,3:684,4:185,5:410,7:276,8:201,9:146,10:1481,11:2352,12:1255,13:1770,14:1331,15:848,16:1972,17:725


chrom: chr3
strand: +
right_annotated: ENSG00000241478.1:HSPA8P9:processed_pseudogene:1943
samples:
,0:13529,1:12879,2:833,3:648,4:653,5:1050,6:2799,7:983,8:2468,9:902,10:3665,11:1302,12:2260,13:2147,14:2224,15:569,16:3845,17:440


chrom: chr3
strand: +
right_annotated: ENSG00000066405.12:CLDN18:protein_coding:3880
samples:
,0:459,1:168,2:4215,3:6190,4:3257,5:6386,6:4043,7:7848,8:8009,9:6245,10:17148,11:23642,12:8933,13:9894,14:10272,15:23147,16:18140,17:9018


chrom: chr3
strand: -
right_annotated: ENSG00000158163.14:DZIP1L:protein_coding:5045
samples:
,0:17583,1:4278,2:61497,3:53298,4:44971,5:66511,6:46278,7:46800,8:53469,9:26612,10:81902,11:77560,12:45792,13:63790,14:48454,15:57154,16:62056,17:31759


chrom: chr3
strand: -
right_annotated: ENSG00000240668.1:KRT8P36:processed_pseudogene:1440
samples:
,0:509,1:5766,5:404,6:200,7:406,8:200,10:3817,11:3000,12:3094,13:2634,14:2068,15:1313,16:2305,17:1010


chrom: chr3
strand: -
right_annotated: ENSG00000118017.3:A4GNT:protein_coding:1771
samples:
,0:102,1:203,3:602,4:704,5:606,6:672,7:1082,8:1505,9:520,10:1094,11:1256,12:435,13:202,14:665,15:1022,16:1721,17:937


chrom: chr3
strand: -
right_annotated: ENSG00000138231.12:DBR1:protein_coding:3160
samples:
,0:25123,1:20296,2:259328,3:378748,4:274258,5:444779,6:255275,7:323941,8:272778,9:187477,10:476762,11:337804,12:390945,13:322430,14:332631,15:209308,16:324438,17:129234


chrom: chr3
strand: +
right_annotated: ENSG00000114098.17:ARMC8:protein_coding:9848
samples:
,0:48332,1:21367,2:608424,3:924766,4:584256,5:1342324,6:684247,7:903828,8:794616,9:784857,10:1438068,11:1155431,12:1085138,13:1071985,14:1024856,15:697632,16:1044627,17:523478


chrom: chr3
strand: -
right_annotated: ENSG00000181322.13:NME9:protein_coding:3738
samples:
,0:108,1:183,2:26802,3:34577,4:20467,5:34831,6:22096,7:27301,8:24576,9:29013,10:67918,11:73277,12:53239,13:49398,14:51319,15:64000,16:57644,17:41125


chrom: chr3
strand: +
right_annotated: ENSG00000158186.12:MRAS:protein_coding:6365
samples:
,0:118303,1:8349,2:1284676,3:1521423,4:1378699,5:2259966,6:2278206,7:1709789,8:1815997,9:2003809,10:1278027,11:1026757,12:1564873,13:1155762,14:1786634,15:769799,16:1326644,17:937716


chrom: chr3
strand: +
right_annotated: ENSG00000158220.13:ESYT3:protein_coding:9816
samples:
,0:204,1:893,2:10466,3:13744,4:10641,5:20472,6:24174,7:25975,8:22497,9:33024,10:41570,11:69535,12:38498,13:36873,14:53023,15:59323,16:47890,17:40408


chrom: chr3
strand: +
right_annotated: ENSG00000280399.1:RP11-80P20.3:TEC:3691
samples:
,2:6000,3:7366,4:8974,5:13281,6:7754,7:10421,8:10381,9:8196,10:15179,11:28028,12:15667,13:17581,14:22336,15:28495,16:19031,17:15831


chrom: chr3
strand: -
right_annotated: ENSG00000114107.8:CEP70:protein_coding:4420
samples:
,0:16847,1:8789,2:284637,3:553270,4:288218,5:558280,6:264536,7:330732,8:244508,9:205459,10:903161,11:714357,12:848608,13:707730,14:764589,15:427109,16:659934,17:170038


chrom: chr3
strand: +
right_annotated: ENSG00000158234.12:FAIM:protein_coding:4072
samples:
,0:11289,1:6919,2:111579,3:207963,4:89559,5:196850,6:111650,7:129258,8:131905,9:115471,10:157819,11:142870,12:116040,13:135993,14:134912,15:94483,16:139833,17:62980


chrom: chr3
strand: -
right_annotated: ENSG00000174715.7:RP11-79L9.2:processed_pseudogene:504
samples:
,0:89,1:50,2:408,3:527,4:108,5:516,6:757,7:1275,8:195,9:101,10:5492,11:4303,12:4179,13:2361,14:4081,15:2282,16:3821,17:2360


chrom: chr3
strand: -
right_annotated: ENSG00000051382.8:PIK3CB:protein_coding:7850
samples:
,0:5412,1:9456,2:321464,3:573957,4:363990,5:543794,6:368617,7:485086,8:417024,9:545516,10:451740,11:508817,12:522165,13:464960,14:508398,15:413378,16:408274,17:370335


chrom: chr3
strand: +
right_annotated: ENSG00000241429.1:EEF1A1P25:processed_pseudogene:1267
samples:
,0:12397,1:7627,2:20726,3:29704,4:17490,5:20557,6:13451,7:17963,8:17658,9:7539,10:67786,11:41793,12:48220,13:44213,14:34820,15:17378,16:38659,17:15382


chrom: chr3
strand: -
right_annotated: ENSG00000183770.5:FOXL2:protein_coding:2917
samples:
,1:998,2:7690,3:3835,4:4456,5:3125,6:3228,7:2321,8:7545,9:2421,10:3526,11:1840,12:631,13:1211,14:2159,15:2723,16:3484,17:2588


chrom: chr3
strand: +
right_annotated: ENSG00000206262.8:FOXL2NB:protein_coding:4567
samples:
,0:408,1:459,2:5879,3:7086,4:5172,5:9375,6:4131,7:8201,8:11649,9:7544,10:4519,11:3210,12:2504,13:4172,14:3977,15:4396,16:4883,17:3931


chrom: chr3
strand: +
right_annotated: ENSG00000175110.11:MRPS22:protein_coding:5382
samples:
,0:57817,1:21733,2:354706,3:390888,4:348108,5:591111,6:334076,7:384292,8:405865,9:333369,10:535233,11:340629,12:471316,13:355432,14:388919,15:239733,16:437268,17:178154


chrom: chr3
strand: -
right_annotated: ENSG00000272656.1:RP11-219D15.3:antisense:348
samples:
,0:490,1:84,2:2354,3:3846,4:1476,5:2589,6:1980,7:3239,8:1992,9:2743,10:13107,11:9054,12:5603,13:6945,14:4766,15:4048,16:6320,17:3425


chrom: chr3
strand: -
right_annotated: ENSG00000184432.9:COPB2:protein_coding:8177
samples:
,0:482662,1:119499,2:1148655,3:1515891,4:1150534,5:2317391,6:1245798,7:1465564,8:1363313,9:1135281,10:2194014,11:1470762,12:1937136,13:1519096,14:1617110,15:960356,16:1593540,17:692041


chrom: chr3
strand: +
right_annotated: ENSG00000283418.1:U6:snRNA:88
samples:
,0:128,2:356,3:253,4:330,5:563,7:30,8:174,10:1775,11:1193,12:531,13:1702,14:1251,15:797,16:1423,17:518


chrom: chr3
strand: +
right_annotated: ENSG00000248932.5:RP11-319G6.1:antisense:2120
samples:
,0:1340,1:525,2:32553,3:34927,4:30716,5:51483,6:40830,7:43006,8:37398,9:30469,10:93243,11:93671,12:67123,13:65564,14:78738,15:72157,16:115225,17:36197


chrom: chr3
strand: -
right_annotated: ENSG00000114113.6:RBP2:protein_coding:845
samples:
,2:1024,3:2219,4:1914,5:2819,6:1293,7:2076,8:2708,9:2116,10:7711,11:13732,12:5023,13:3904,14:6657,15:10244,16:5817,17:4177


chrom: chr3
strand: +
right_annotated: ENSG00000178631.7:ACTG1P1:processed_pseudogene:1129
samples:
,0:1396,1:868,2:11351,3:9148,4:8829,5:17652,6:16911,7:11700,8:13110,9:13113,10:20525,11:19947,12:16221,13:15232,14:18226,15:11576,16:26255,17:14021


chrom: chr3
strand: -
right_annotated: ENSG00000114115.9:RBP1:protein_coding:3905
samples:
,0:102,1:306,2:925682,3:484173,4:523670,5:423695,6:780535,7:176030,8:460584,9:124056,10:1200470,11:320624,12:599849,13:192538,14:527707,15:109915,16:305461,17:76559


chrom: chr3
strand: -
right_annotated: ENSG00000163864.15:NMNAT3:protein_coding:3451
samples:
,0:408,1:2422,2:103140,3:144808,4:73936,5:93684,6:142914,7:58579,8:89111,9:78939,10:194142,11:128745,12:94937,13:69756,14:100784,15:42361,16:72084,17:61022


chrom: chr3
strand: -
right_annotated: ENSG00000214280.3:RP11-553K23.2:processed_pseudogene:666
samples:
,0:1632,1:461,2:7531,3:10980,4:6473,5:18766,6:10901,7:15582,8:10720,9:9941,10:26234,11:32661,12:21325,13:24434,14:21476,15:21055,16:34171,17:10165


chrom: chr3
strand: -
right_annotated: ENSG00000201600.1:RN7SKP124:misc_RNA:341
samples:
,0:2971,1:1690,2:144,3:283,4:213,5:327,6:200,7:622,9:587,10:17928,11:12620,12:7550,13:9744,14:6955,15:3392,16:11772,17:2136


chrom: chr3
strand: -
right_annotated: ENSG00000244692.3:RN7SL724P:misc_RNA:271
samples:
,0:3832,1:2061,2:936,3:1134,4:1156,5:1817,6:1226,7:1424,8:2794,9:1511,10:4741,11:2872,12:1233,13:2776,14:2317,15:4927,16:3516,17:2020


chrom: chr3
strand: -
right_annotated: ENSG00000261763.1:RP11-442N1.2:lincRNA:3945
samples:
,1:47,2:200,3:101,4:405,5:909,7:404,8:800,10:6159,11:10021,12:2865,13:4672,14:5947,15:15944,16:7536,17:4932


chrom: chr3
strand: +
right_annotated: ENSG00000158258.16:CLSTN2:protein_coding:14596
samples:
,1:102,2:1941722,3:2889697,4:1888989,5:1429782,6:1209704,7:509778,8:575741,9:1769724,10:2657706,11:3162925,12:2914121,13:926106,14:1993952,15:457822,16:925800,17:1580261


chrom: chr3
strand: -
right_annotated: ENSG00000250433.1:CLSTN2-AS1:antisense:2693
samples:
,2:399,3:824,4:200,5:257,6:721,7:259,8:500,9:650,10:20110,11:39776,12:12908,13:4504,14:9497,15:6152,16:6266,17:11776


chrom: chr3
strand: +
right_annotated: ENSG00000114120.11:SLC25A36:protein_coding:9277
samples:
,0:27498,1:12943,2:1447496,3:2165471,4:1725317,5:3051738,6:1724475,7:2036043,8:1528971,9:1613995,10:2544147,11:2568521,12:2205793,13:2348990,14:2150112,15:1377447,16:1822228,17:1131434


chrom: chr3
strand: +
right_annotated: ENSG00000248773.1:RP11-231L11.3:sense_intronic:393
samples:
,0:145,2:1795,3:2725,4:4046,5:4030,6:2156,7:5662,8:1276,9:1598,10:8232,11:13957,12:11112,13:8371,14:8537,15:7508,16:7891,17:4381


chrom: chr3
strand: +
right_annotated: ENSG00000175093.4:SPSB4:protein_coding:3740
samples:
,0:29,1:132,2:281844,3:168789,4:175606,5:226267,6:226196,7:139639,8:236203,9:77394,10:206711,11:115273,12:128654,13:151918,14:118566,15:79186,16:150171,17:46589


chrom: chr3
strand: +
right_annotated: ENSG00000155893.12:PXYLP1:protein_coding:13325
samples:
,0:6855,1:7221,2:711093,3:876906,4:531073,5:1017882,6:786189,7:730322,8:877768,9:731287,10:845010,11:798429,12:781262,13:738663,14:890956,15:424437,16:815868,17:441363


chrom: chr3
strand: -
right_annotated: ENSG00000249417.1:RP11-438D8.2:antisense:422
samples:
,0:461,1:125,2:161,3:626,4:145,5:937,6:483,7:336,8:203,9:1023,10:4285,11:8044,12:1516,13:2363,14:919,15:2130,16:1867,17:2249


chrom: chr3
strand: -
right_annotated: ENSG00000249540.1:RP11-789L4.1:processed_pseudogene:322
samples:
,2:1132,3:942,4:1256,5:1688,6:1947,7:605,8:767,9:1069,10:2209,11:1187,12:1774,13:1310,14:2051,15:997,16:2083,17:2330


chrom: chr3
strand: +
right_annotated: ENSG00000177311.11:ZBTB38:protein_coding:14243
samples:
,0:201045,1:86486,2:612809,3:911493,4:993634,5:1678566,6:1376999,7:1477819,8:1417803,9:1383110,10:1492790,11:1897034,12:2576794,13:2105164,14:3109767,15:1771421,16:2870624,17:1610337


chrom: chr3
strand: +
right_annotated: ENSG00000155903.11:RASA2:protein_coding:5993
samples:
,0:42672,1:16301,2:400850,3:831556,4:513950,5:838201,6:406261,7:774957,8:479661,9:562398,10:1040535,11:990650,12:897907,13:883409,14:810399,15:687244,16:830457,17:415977


chrom: chr3
strand: -
right_annotated: ENSG00000280530.1:AC010184.1:protein_coding:69
samples:
,0:211,1:70,2:1310,3:1117,4:1873,5:2350,6:1319,7:672,8:1180,9:767,10:2560,11:2731,12:1690,13:2546,14:1619,15:1523,16:2491,17:1823


chrom: chr3
strand: -
right_annotated: ENSG00000249986.1:YWHAQP6:processed_pseudogene:304
samples:
,0:1225,1:1054,2:1149,3:1168,4:2682,5:2822,6:3342,7:494,8:2334,9:1495,10:2589,11:5913,12:4169,13:5272,14:3991,15:5100,16:4144,17:4097


chrom: chr3
strand: +
right_annotated: ENSG00000114125.13:RNF7:protein_coding:3147
samples:
,0:95920,1:44117,2:353006,3:431292,4:304575,5:594597,6:466605,7:424523,8:479715,9:380175,10:561855,11:317012,12:398222,13:326112,14:365908,15:185592,16:421116,17:191587


chrom: chr3
strand: +
right_annotated: ENSG00000114124.2:GRK7:protein_coding:3239
samples:
,2:992,3:1468,4:1396,5:4276,6:1600,7:3151,8:2159,9:1201,10:1430,11:3367,12:1667,13:2224,14:1302,15:734,16:3378,17:1127


chrom: chr3
strand: +
right_annotated: ENSG00000069849.10:ATP1B3:protein_coding:2584
samples:
,0:108256,1:37768,2:980642,3:1221885,4:934028,5:1429616,6:866379,7:1167158,8:997879,9:886554,10:1178294,11:776208,12:960226,13:855513,14:778259,15:513543,16:794151,17:490300


chrom: chr3
strand: -
right_annotated: ENSG00000244124.1:ATP1B3-AS1:antisense:376
samples:
,0:219,1:189,2:15986,3:32559,4:21673,5:30564,6:13956,7:22933,8:15580,9:18040,10:33653,11:32053,12:40353,13:25138,14:21898,15:26076,16:26207,17:15021


chrom: chr3
strand: -
right_annotated: ENSG00000279147.1:RP11-271K21.12:TEC:1841
samples:
,1:51,2:1499,3:3307,4:2700,5:3752,6:785,7:3700,8:2285,9:1107,10:5402,11:11266,12:7690,13:4967,14:5294,15:7169,16:9674,17:2861


chrom: chr3
strand: -
right_annotated: ENSG00000114126.17:TFDP2:protein_coding:11897
samples:
,0:39554,1:21220,2:1243342,3:1619255,4:1049381,5:2177330,6:960248,7:1291832,8:1061112,9:524177,10:2076059,11:1517793,12:1465967,13:1214443,14:1173865,15:890543,16:1202156,17:350791


chrom: chr3
strand: -
right_annotated: ENSG00000233597.3:RP11-343B5.1:processed_pseudogene:576
samples:
,0:1626,1:1209,2:2159,3:4492,4:1111,5:2129,6:2652,7:1347,8:3015,9:1309,10:11438,11:11886,12:8022,13:6205,14:8980,15:8044,16:9151,17:1514


chrom: chr3
strand: -
right_annotated: ENSG00000175066.15:GK5:protein_coding:12158
samples:
,0:24504,1:18355,2:281100,3:517700,4:352139,5:648514,6:394367,7:543089,8:482866,9:564327,10:634186,11:497557,12:511879,13:514099,14:549724,15:424698,16:665148,17:379396


chrom: chr3
strand: -
right_annotated: ENSG00000114127.10:XRN1:protein_coding:11982
samples:
,0:62438,1:16479,2:452745,3:776668,4:630395,5:1078739,6:590958,7:769997,8:606546,9:572967,10:1731677,11:1770988,12:1680788,13:1437446,14:1733532,15:1252657,16:1653988,17:734792


chrom: chr3
strand: -
right_annotated: ENSG00000202125.1:RNU1-100P:snRNA:165
samples:
,0:151,1:232,2:13,4:19,5:195,6:19,7:11,9:202,10:2645,11:2540,12:2066,13:1851,14:1868,15:1008,16:2076,17:1230


chrom: chr3
strand: -
right_annotated: ENSG00000175054.14:ATR:protein_coding:12496
samples:
,0:88545,1:57755,2:253643,3:480988,4:225755,5:573988,6:278392,7:392374,8:315080,9:388463,10:1134146,11:854957,12:731348,13:710840,14:777515,15:488749,16:807563,17:452351


chrom: chr3
strand: +
right_annotated: ENSG00000242479.1:RP11-383G6.4:processed_pseudogene:2048
samples:
,0:1134,1:591,2:31374,3:59893,4:16853,5:50001,6:27339,7:35754,8:35541,9:37878,10:43690,11:39677,12:21667,13:28729,14:25678,15:20559,16:28809,17:17506


chrom: chr3
strand: -
right_annotated: ENSG00000244327.1:RP11-383G6.3:sense_overlapping:765
samples:
,0:102,2:372,3:2223,4:2318,5:1536,6:1346,7:1299,8:918,9:1930,10:3857,11:7041,12:6374,13:2379,14:3255,15:4692,16:3056,17:2572


chrom: chr3
strand: +
right_annotated: ENSG00000242390.1:RPL6P9:processed_pseudogene:859
samples:
,0:41,2:917,3:771,4:570,5:1095,6:2212,7:454,8:1744,9:2397,10:1835,11:1001,12:755,13:633,14:1650,15:484,16:964,17:1351


chrom: chr3
strand: +
right_annotated: ENSG00000120756.12:PLS1:protein_coding:5294
samples:
,0:1368,1:39971,2:23888,3:29075,4:16114,5:37827,6:23807,7:12373,8:11251,9:34906,10:90523,11:56141,12:53479,13:45096,14:74366,15:39577,16:42794,17:72141


chrom: chr3
strand: -
right_annotated: ENSG00000239641.1:PLS1-AS1:antisense:346
samples:
,2:60,3:126,4:78,5:273,6:262,8:152,9:451,10:1033,11:1365,12:997,13:691,14:2713,15:1551,16:1438,17:2953


chrom: chr3
strand: +
right_annotated: ENSG00000199319.1:RN7SKP25:misc_RNA:308
samples:
,0:383,1:274,3:140,4:14,5:363,6:247,7:101,8:53,9:288,10:6876,11:1715,12:4016,13:1915,14:3834,15:996,16:6135,17:2605


chrom: chr3
strand: +
right_annotated: ENSG00000144935.14:TRPC1:protein_coding:4768
samples:
,0:23165,1:15210,2:227531,3:393985,4:243619,5:390826,6:338043,7:327866,8:288743,9:509761,10:840205,11:590621,12:618857,13:528522,14:775942,15:361287,16:726675,17:460336


chrom: chr3
strand: +
right_annotated: ENSG00000251787.1:RNU7-47P:snRNA:62
samples:
,2:493,3:710,4:630,5:284,6:234,7:294,8:374,9:648,10:1525,11:1873,12:953,13:158,14:830,15:912,16:820,17:481


chrom: chr3
strand: -
right_annotated: ENSG00000163710.7:PCOLCE2:protein_coding:3480
samples:
,0:5670,1:14667,2:20661,3:10743,4:10227,5:29453,6:28976,7:32840,8:28041,9:22584,10:11055,11:7721,12:15211,13:17446,14:24098,15:16047,16:26221,17:9171


chrom: chr3
strand: -
right_annotated: ENSG00000240950.1:RP11-372E1.1:processed_pseudogene:633
samples:
,0:11504,1:13929,2:1704,3:402,4:1039,5:603,6:2782,7:1688,8:2233,9:598,10:3162,11:720,12:1985,13:678,14:1251,15:1233,16:2939,17:95


chrom: chr3
strand: -
right_annotated: ENSG00000188582.8:PAQR9:protein_coding:4169
samples:
,1:1725,2:18223,3:8990,4:23622,5:22097,6:29687,7:15944,8:20198,9:28219,10:15954,11:20245,12:29428,13:30535,14:35139,15:12303,16:27494,17:38150


chrom: chr3
strand: +
right_annotated: ENSG00000241592.1:RP11-372E1.7:processed_pseudogene:172
samples:
,1:153,2:1477,3:997,4:1185,5:1907,6:1692,7:1227,8:1307,9:2691,10:2350,11:2227,12:2799,13:1132,14:2088,15:943,16:2186,17:2823


chrom: chr3
strand: +
right_annotated: ENSG00000241570.8:PAQR9-AS1:antisense:4421
samples:
,0:1086,1:1503,2:18752,3:14521,4:18509,5:29094,6:31612,7:20697,8:23308,9:36866,10:30624,11:22143,12:42980,13:31408,14:52748,15:18778,16:40088,17:38727


chrom: chr3
strand: +
right_annotated: ENSG00000163714.17:U2SURP:protein_coding:11118
samples:
,0:99380,1:109806,2:2081536,3:3255201,4:2656098,5:4674991,6:2331494,7:3577201,8:2582504,9:2720249,10:4787549,11:3829575,12:4669012,13:4004234,14:4474886,15:2845794,16:3966636,17:1726890


chrom: chr3
strand: -
right_annotated: ENSG00000268129.1:RP11-91G21.1:lincRNA:561
samples:
,0:1150,1:1031,2:4972,3:5970,4:2623,5:5126,6:7098,7:7456,8:5879,9:9524,10:14892,11:5363,12:6697,13:4877,14:9228,15:4668,16:8699,17:6493


chrom: chr3
strand: +
right_annotated: ENSG00000175040.5:CHST2:protein_coding:4582
samples:
,0:14226,1:102,2:385702,3:317126,4:587027,5:381956,6:965074,7:299399,8:640624,9:537094,10:148874,11:243730,12:350993,13:276390,14:397581,15:170895,16:411169,17:355287


chrom: chr3
strand: +
right_annotated: ENSG00000241679.2:RP11-80H8.4:processed_transcript:746
samples:
,2:3181,3:9326,4:4806,5:8190,6:4749,7:6509,8:6104,9:9390,10:3270,11:13597,12:19876,13:9360,14:16860,15:8246,16:12149,17:10843


chrom: chr3
strand: +
right_annotated: ENSG00000244171.4:PBX2P1:processed_pseudogene:1291
samples:
,0:4679,1:2026,2:140970,3:89176,4:64436,5:112638,6:97087,7:89021,8:111554,9:59206,10:71905,11:37593,12:42326,13:48509,14:33810,15:39682,16:52003,17:27417


chrom: chr3
strand: -
right_annotated: ENSG00000181804.14:SLC9A9:protein_coding:4087
samples:
,0:4531,1:51,2:27581,3:27096,4:14775,5:51776,6:24792,7:37869,8:46672,9:25031,10:67393,11:39905,12:29647,13:45582,14:46617,15:31106,16:62444,17:17859


chrom: chr3
strand: +
right_annotated: ENSG00000244493.1:SLC9A9-AS2:antisense:327
samples:
,0:48,2:357,3:355,4:245,5:882,6:130,7:521,8:305,9:229,10:2473,11:440,12:492,13:908,14:1287,15:597,16:1173,17:528


chrom: chr3
strand: -
right_annotated: ENSG00000243759.1:ST13P15:processed_pseudogene:1107
samples:
,0:15499,1:5630,2:248477,3:190082,4:178999,5:371412,6:196181,7:208513,8:249569,9:173578,10:250184,11:119335,12:257856,13:153014,14:225276,15:117581,16:224646,17:58689


chrom: chr3
strand: -
right_annotated: ENSG00000235110.5:RP11-8J23.1:processed_pseudogene:404
samples:
,0:30,1:35,2:359,3:93,4:324,5:98,6:193,7:90,8:613,9:182,10:478,12:462,13:502,14:755,15:573,16:641,17:142


chrom: chr3
strand: +
right_annotated: ENSG00000181744.8:C3orf58:protein_coding:5487
samples:
,0:36069,1:14830,2:88126,3:123929,4:91816,5:220913,6:113108,7:357917,8:273771,9:101468,10:488879,11:323054,12:227483,13:384762,14:278004,15:482126,16:692042,17:169192


chrom: chr3
strand: -
right_annotated: ENSG00000280397.1:RP11-42F12.1:TEC:3634
samples:
,2:30,3:228,4:38,5:153,7:182,8:296,9:91,10:5248,11:5274,12:2600,13:3124,14:3831,15:4984,16:12732,17:2627


chrom: chr3
strand: -
right_annotated: ENSG00000239797.1:RPL21P39:processed_pseudogene:483
samples:
,0:6605,1:2954,2:20684,3:62631,4:18731,5:70997,6:36676,7:57276,8:43879,9:16170,10:84473,11:54649,12:55862,13:84875,14:54554,15:34301,16:37897,17:23056


chrom: chr3
strand: -
right_annotated: ENSG00000261051.1:RP11-274H2.5:sense_overlapping:2095
samples:
,0:508,1:504,2:598,3:1211,4:1445,5:2559,6:999,7:2100,8:2197,9:2115,10:3016,11:6200,12:5010,13:2147,14:951,15:1801,16:5659,17:2246


chrom: chr3
strand: +
right_annotated: ENSG00000243415.2:RP11-274H2.2:antisense:807
samples:
,0:306,1:393,2:26,4:96,5:281,7:708,8:444,9:555,10:2182,11:879,12:1077,13:954,14:661,15:1185,16:1918,17:956


chrom: chr3
strand: -
right_annotated: ENSG00000240032.1:RP11-274H2.3:antisense:709
samples:
,0:696,1:94,2:109,3:281,4:673,5:759,6:160,7:469,8:1109,9:848,10:2141,11:3759,12:2371,13:1476,14:618,15:1812,16:1233,17:1605


chrom: chr3
strand: -
right_annotated: ENSG00000152952.11:PLOD2:protein_coding:7646
samples:
,0:429098,1:163347,2:90613,3:122136,4:98485,5:197278,6:54978,7:172845,8:124951,9:82861,10:281350,11:149874,12:183476,13:178053,14:104433,15:142248,16:185590,17:67334


chrom: chr3
strand: -
right_annotated: ENSG00000114698.14:PLSCR4:protein_coding:4227
samples:
,0:20878,1:5624,2:24995,3:46821,4:23472,5:36571,6:32345,7:31182,8:48823,9:26178,10:63150,11:53311,12:42004,13:23384,14:37314,15:20590,16:58774,17:17852


chrom: chr3
strand: -
right_annotated: ENSG00000163746.11:PLSCR2:protein_coding:2557
samples:
,0:96,1:78,2:18,3:45,4:68,5:38,6:41,7:43,8:34,9:189,10:36,11:643,12:30,13:13,14:71,15:286,16:40,17:387


chrom: chr3
strand: -
right_annotated: ENSG00000188313.12:PLSCR1:protein_coding:4340
samples:
,0:19385,1:23290,2:48449,3:57106,4:31541,5:67762,6:25988,7:49946,8:45213,9:22696,10:87572,11:54192,12:38832,13:38997,14:28682,15:27655,16:39563,17:10368


chrom: chr3
strand: -
right_annotated: ENSG00000174963.17:ZIC4:protein_coding:8568
samples:
,2:9961,3:9825,4:10112,5:9606,6:18057,7:6228,8:34379,9:8956,10:13430,11:4333,12:9702,13:6480,14:11903,15:2863,16:24263,17:7273


chrom: chr3
strand: +
right_annotated: ENSG00000152977.9:ZIC1:protein_coding:6806
samples:
,0:204,2:81799,3:46701,4:111221,5:54769,6:153772,7:53831,8:196680,9:80012,10:359492,11:48210,12:112779,13:50137,14:153128,15:37095,16:178969,17:65887


chrom: chr3
strand: +
right_annotated: ENSG00000239922.1:RP11-71N10.1:lincRNA:2835
samples:
,2:2029,3:1075,4:1267,5:5143,6:4221,7:6233,8:7915,9:3618,10:3246,11:2773,12:2768,13:3203,14:4580,15:5371,16:7496,17:4592


chrom: chr3
strand: -
right_annotated: ENSG00000205412.5:HNRNPA1P20:processed_pseudogene:955
samples:
,0:51,1:41,2:1102,3:1243,4:808,5:1798,6:683,7:913,8:1247,9:880,10:1997,11:668,12:1034,13:1206,14:975,15:712,16:1618,17:410


chrom: chr3
strand: +
right_annotated: ENSG00000144891.17:AGTR1:protein_coding:3478
samples:
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chrom: chr3
strand: -
right_annotated: ENSG00000241627.3:UBQLN4P1:processed_pseudogene:1801
samples:
,0:8933,1:7762,2:405015,3:190353,4:306859,5:347174,6:400131,7:211859,8:412713,9:257137,10:168110,11:102590,12:146871,13:133353,14:150455,15:107960,16:177392,17:104695


chrom: chr3
strand: +
right_annotated: ENSG00000163754.17:GYG1:protein_coding:3511
samples:
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chrom: chr3
strand: -
right_annotated: ENSG00000071794.15:HLTF:protein_coding:6024
samples:
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chrom: chr3
strand: +
right_annotated: ENSG00000239718.1:HLTF-AS1:antisense:415
samples:
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chrom: chr3
strand: +
right_annotated: ENSG00000163755.8:HPS3:protein_coding:6256
samples:
,0:46643,1:39259,2:232230,3:330920,4:247375,5:437787,6:247481,7:329162,8:297761,9:235898,10:480973,11:355883,12:384296,13:346332,14:353357,15:223990,16:362865,17:158581


chrom: chr3
strand: -
right_annotated: ENSG00000047457.13:CP:protein_coding:7296
samples:
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chrom: chr3
strand: +
right_annotated: ENSG00000244468.1:RP11-206M11.7:antisense:551
samples:
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chrom: chr3
strand: -
right_annotated: ENSG00000163762.6:TM4SF18:protein_coding:4482
samples:
,0:306,1:31358,2:22248,3:37254,4:47208,5:70049,6:46457,7:55195,8:63874,9:67930,10:47274,11:39838,12:58913,13:44612,14:48359,15:33536,16:54554,17:36948


chrom: chr3
strand: -
right_annotated: ENSG00000169908.11:TM4SF1:protein_coding:3668
samples:
,0:54274,1:461726,2:18587,3:58986,4:48157,5:90030,6:45103,7:69648,8:102107,9:62286,10:34757,11:38419,12:64696,13:56984,14:48737,15:27063,16:92030,17:22456


chrom: chr3
strand: -
right_annotated: ENSG00000239408.1:RP11-278L15.4:processed_pseudogene:363
samples:
,0:91,1:51,2:1828,3:100,4:475,5:754,6:665,7:293,8:581,9:670,10:868,11:286,12:949,13:502,14:298,15:98,16:1234,17:293


chrom: chr3
strand: +
right_annotated: ENSG00000244503.1:RP11-278L15.6:processed_pseudogene:1336
samples:
,0:117,1:437,2:15612,3:9307,4:10986,5:10697,6:9035,7:6069,8:10317,9:5437,10:23828,11:8946,12:32934,13:13781,14:21609,15:3513,16:14997,17:6006


chrom: chr3
strand: -
right_annotated: ENSG00000018408.14:WWTR1:protein_coding:8413
samples:
,0:35860,1:59146,2:99278,3:125893,4:103164,5:155701,6:80627,7:184301,8:182107,9:89346,10:116956,11:143545,12:121379,13:112729,14:104987,15:164657,16:197624,17:71956


chrom: chr3
strand: +
right_annotated: ENSG00000241313.2:WWTR1-AS1:antisense:2603
samples:
,0:5542,1:3422,2:22109,3:5580,4:16624,5:16405,6:14779,7:9084,8:20581,9:6491,10:6654,11:7195,12:9629,13:14280,14:8266,15:10806,16:17578,17:7427


chrom: chr3
strand: -
right_annotated: ENSG00000114744.8:COMMD2:protein_coding:4901
samples:
,0:46588,1:25358,2:804438,3:1560537,4:677815,5:1567247,6:707741,7:1237445,8:887929,9:864743,10:2184673,11:1476947,12:1085594,13:1259003,14:1081661,15:751009,16:1186993,17:505931


chrom: chr3
strand: -
right_annotated: ENSG00000206199.9:ANKUB1:protein_coding:6539
samples:
,0:10660,1:6497,2:115511,3:139315,4:95820,5:226335,6:139898,7:148697,8:196764,9:127533,10:155091,11:102172,12:144129,13:131935,14:147016,15:82596,16:169677,17:55419


chrom: chr3
strand: +
right_annotated: ENSG00000082996.19:RNF13:protein_coding:3635
samples:
,0:35283,1:42273,2:202339,3:302927,4:177713,5:354131,6:218543,7:290523,8:274858,9:232304,10:660172,11:470565,12:420032,13:399261,14:445490,15:260678,16:499432,17:176048


chrom: chr3
strand: -
right_annotated: ENSG00000252172.1:RNU6-720P:snRNA:108
samples:
,0:51,2:780,3:778,4:687,5:628,6:563,7:164,8:399,9:948,10:2931,11:3172,12:2604,13:1878,14:2978,15:1557,16:2538,17:1047


chrom: chr3
strand: -
right_annotated: ENSG00000239351.1:NPM1P29:processed_pseudogene:803
samples:
,0:545,1:747,2:277,3:808,4:387,5:1261,6:698,7:776,8:439,9:522,10:13822,11:15528,12:8049,13:9083,14:12206,15:11714,16:10883,17:4970


chrom: chr3
strand: -
right_annotated: ENSG00000070087.13:PFN2:protein_coding:3440
samples:
,0:250650,1:94235,2:3628271,3:4536361,4:3614807,5:6897007,6:4468690,7:5455043,8:6506852,9:3868691,10:4879971,11:3050755,12:4160808,13:4276668,14:4091162,15:2419128,16:5235016,17:2043795


chrom: chr3
strand: +
right_annotated: ENSG00000242791.2:RP11-651P23.5:lincRNA:721
samples:
,2:3554,3:7682,4:3708,5:7336,6:3453,7:6496,8:7480,9:6063,10:6864,11:9734,12:7653,13:9925,14:8750,15:6334,16:13674,17:5057


chrom: chr3
strand: -
right_annotated: ENSG00000224831.3:RP11-651P23.4:processed_pseudogene:1128
samples:
,0:45491,1:39379,2:305631,3:351038,4:275212,5:535791,6:408877,7:393963,8:499362,9:374242,10:473181,11:262126,12:384854,13:324241,14:403778,15:164749,16:389783,17:198170


chrom: chr3
strand: +
right_annotated: ENSG00000182000.9:RP11-651P23.2:processed_pseudogene:403
samples:
,0:114,2:294,3:343,4:582,5:1373,6:1123,7:1356,8:1637,9:547,10:1573,11:3462,12:1733,13:2953,14:1241,15:976,16:2652,17:1059


chrom: chr3
strand: +
right_annotated: ENSG00000241947.1:HNRNPA1P24:processed_pseudogene:1046
samples:
,2:471,3:335,4:200,5:404,6:200,7:903,8:776,9:356,10:1969,11:1876,12:2000,13:1111,14:1773,15:1708,16:1550,17:1074


chrom: chr3
strand: +
right_annotated: ENSG00000196428.12:TSC22D2:protein_coding:11676
samples:
,0:27725,1:5107,2:729146,3:664458,4:615038,5:837488,6:642600,7:745729,8:719189,9:576775,10:856136,11:941850,12:922520,13:820593,14:972081,15:958963,16:1012505,17:721730


chrom: chr3
strand: -
right_annotated: ENSG00000120742.10:SERP1:protein_coding:5747
samples:
,0:215315,1:75004,2:732652,3:970225,4:747320,5:1244003,6:635376,7:936252,8:703901,9:569498,10:1494598,11:1030630,12:971306,13:1136569,14:801777,15:583802,16:883538,17:446358


chrom: chr3
strand: +
right_annotated: ENSG00000144895.11:EIF2A:protein_coding:4131
samples:
,0:93498,1:58953,2:854634,3:1213032,4:912060,5:1756428,6:882944,7:1083266,8:1061482,9:829821,10:1476872,11:951040,12:1334331,13:1142347,14:1294893,15:710229,16:1185437,17:436318


chrom: chr3
strand: +
right_annotated: ENSG00000198843.12:SELT:protein_coding:4135
samples:
,0:131434,1:53775,2:397417,3:607145,4:436150,5:975908,6:518014,7:774593,8:716073,9:666022,10:890187,11:709509,12:737393,13:774823,14:744432,15:486390,16:877757,17:460295


chrom: chr3
strand: -
right_annotated: ENSG00000271711.1:RP11-392O18.2:processed_pseudogene:616
samples:
,0:1779,1:770,2:1110,3:668,4:458,5:1414,6:392,7:991,9:606,10:8548,11:12642,12:9849,13:14746,14:7677,15:10729,16:11394,17:7606


chrom: chr3
strand: -
right_annotated: ENSG00000163645.14:ERICH6:protein_coding:2075
samples:
,0:224,1:51,2:3215,3:398,4:878,5:2919,6:2790,7:2420,8:4056,9:3685,10:4764,11:2154,12:2609,13:6511,14:2546,15:2759,16:4432,17:1554


chrom: chr3
strand: +
right_annotated: ENSG00000240137.5:ERICH6-AS1:antisense:827
samples:
,0:704,1:253,2:10639,3:7141,4:5579,5:14502,6:13029,7:9159,8:15902,9:19911,10:13651,11:6551,12:5767,13:8838,14:7918,15:9210,16:13802,17:7562


chrom: chr3
strand: -
right_annotated: ENSG00000244668.1:SNRPCP3:processed_pseudogene:476
samples:
,0:66,1:99,2:1678,3:1727,4:2030,5:4189,6:3350,7:2386,8:4004,9:4123,10:5761,11:2067,12:2127,13:2249,14:2346,15:2107,16:2972,17:2528


chrom: chr3
strand: -
right_annotated: ENSG00000181788.3:SIAH2:protein_coding:2617
samples:
,0:20280,1:6978,2:261529,3:235935,4:362635,5:523630,6:441520,7:514277,8:577678,9:411084,10:294744,11:164077,12:325170,13:289911,14:348162,15:197115,16:420355,17:222989


chrom: chr3
strand: +
right_annotated: ENSG00000244265.1:SIAH2-AS1:antisense:441
samples:
,0:1704,1:622,2:20748,3:6619,4:22291,5:27669,6:34765,7:22718,8:38458,9:19595,10:18133,11:12316,12:17789,13:19682,14:15959,15:12240,16:26657,17:14077


chrom: chr3
strand: +
right_annotated: ENSG00000280141.1:AC016142.1:protein_coding:375
samples:
,2:745,3:326,4:293,5:647,6:364,7:325,8:200,9:267,10:1383,11:2491,12:1362,13:1788,14:1967,15:1721,16:1165,17:954


chrom: chr3
strand: +
right_annotated: ENSG00000239265.5:CLRN1-AS1:antisense:3064
samples:
,2:1289,3:1556,4:200,5:2345,6:596,7:1752,8:1519,9:1413,10:2488,11:2001,12:882,13:1702,14:1366,15:2294,16:1449,17:417


chrom: chr3
strand: +
right_annotated: ENSG00000144893.12:MED12L:protein_coding:12619
samples:
,0:357,1:1903,2:137308,3:131603,4:100851,5:226167,6:95978,7:194966,8:142533,9:166670,10:423525,11:401547,12:345365,13:297136,14:274560,15:345495,16:373823,17:288397


chrom: chr3
strand: -
right_annotated: ENSG00000174946.6:GPR171:protein_coding:1795
samples:
,1:203,2:200,3:519,6:45,7:76,8:200,9:181,10:25369,11:28044,12:15964,13:14267,14:13314,15:19029,16:21226,17:14283


chrom: chr3
strand: -
right_annotated: ENSG00000174944.8:P2RY14:protein_coding:2815
samples:
,2:2590,3:4606,4:3100,5:12888,6:5200,7:5714,8:11062,9:11397,10:36349,11:40943,12:22914,13:21282,14:18442,15:29384,16:29358,17:28355


chrom: chr3
strand: -
right_annotated: ENSG00000138271.5:GPR87:protein_coding:1698
samples:
,0:102,1:192,3:202,5:202,6:200,7:404,10:13081,11:15131,12:8447,13:5704,14:5573,15:12917,16:8820,17:10585


chrom: chr3
strand: -
right_annotated: ENSG00000181631.6:P2RY13:protein_coding:2764
samples:
,2:16548,3:21585,4:13940,5:55420,6:15978,7:70993,8:53107,9:17214,10:38259,11:45169,12:25164,13:34253,14:24404,15:47967,16:48096,17:18869


chrom: chr3
strand: -
right_annotated: ENSG00000169313.9:P2RY12:protein_coding:1859
samples:
,2:71183,3:95303,4:55703,5:263309,6:102829,7:302131,8:341385,9:85328,10:153240,11:83827,12:76588,13:149428,14:130903,15:167562,16:275842,17:39213


chrom: chr3
strand: -
right_annotated: ENSG00000152580.8:IGSF10:protein_coding:11727
samples:
,1:408,2:32425,3:53232,4:40983,5:66387,6:37212,7:81415,8:47721,9:73039,10:74954,11:85484,12:53848,13:48950,14:53076,15:70873,16:64975,17:66930


chrom: chr3
strand: +
right_annotated: ENSG00000198829.6:SUCNR1:protein_coding:4181
samples:
,1:306,2:1098,3:2218,4:200,5:10862,6:2196,7:6802,8:4841,9:2222,10:1499,11:2826,12:1197,13:7198,14:3183,15:5101,16:5071,17:1034


chrom: chr3
strand: +
right_annotated: ENSG00000152601.17:MBNL1:protein_coding:9989
samples:
,0:322864,1:94357,2:270220,3:288012,4:326050,5:558700,6:361726,7:397940,8:372992,9:268718,10:883094,11:620994,12:800628,13:746381,14:871487,15:531952,16:850347,17:345533


chrom: chr3
strand: -
right_annotated: ENSG00000229619.3:MBNL1-AS1:antisense:6585
samples:
,0:40036,1:3881,2:10909,3:17490,4:16402,5:30679,6:38495,7:19876,8:21348,9:26893,10:34552,11:26117,12:37640,13:31939,14:63263,15:28604,16:43771,17:25556


chrom: chr3
strand: +
right_annotated: ENSG00000201217.1:Y_RNA:misc_RNA:113
samples:
,0:109,1:36,2:369,3:515,4:369,5:1574,6:461,7:893,8:695,9:757,10:1099,11:2720,12:661,13:1420,14:870,15:1304,16:1308,17:681


chrom: chr3
strand: -
right_annotated: ENSG00000243305.1:RP11-362A9.3:antisense:474
samples:
,0:787,1:228,2:1105,3:991,4:2026,5:1624,6:2145,7:1313,8:1572,9:1546,10:3943,11:4840,12:5345,13:2481,14:3311,15:4019,16:5065,17:2023


chrom: chr3
strand: +
right_annotated: ENSG00000169860.6:P2RY1:protein_coding:6747
samples:
,1:1545,2:30022,3:59826,4:60855,5:117151,6:75881,7:71279,8:102142,9:34423,10:75344,11:81440,12:132148,13:100855,14:128170,15:49512,16:163799,17:31918


chrom: chr3
strand: -
right_annotated: ENSG00000241671.1:RP11-529G21.3:processed_pseudogene:567
samples:
,0:153,1:51,2:500,3:602,4:100,5:1097,6:494,7:501,8:594,9:301,10:1277,11:890,12:1894,13:889,14:1230,15:1342,16:2257,17:581


chrom: chr3
strand: -
right_annotated: ENSG00000244268.1:RP11-529G21.2:antisense:323
samples:
,0:153,1:156,2:160,4:437,5:1115,6:705,7:1000,8:642,9:331,10:979,11:359,12:914,13:466,14:1302,15:863,16:1660,17:223


chrom: chr3
strand: +
right_annotated: ENSG00000181467.4:RAP2B:protein_coding:8351
samples:
,0:80569,1:28989,2:348943,3:477845,4:628555,5:805882,6:701372,7:1022540,8:839704,9:675835,10:802019,11:745192,12:1230275,13:1072739,14:1420882,15:1119890,16:1856690,17:844465


chrom: chr3
strand: -
right_annotated: ENSG00000265813.2:RN7SL300P:misc_RNA:318
samples:
,0:1031,1:661,3:380,7:1045,8:200,9:202,10:54627,11:88752,12:26658,13:110723,14:29717,15:49282,16:38466,17:33493


chrom: chr3
strand: -
right_annotated: ENSG00000238755.3:RP11-23D24.2:processed_transcript:2816
samples:
,3:447,4:271,5:1036,6:522,7:1204,8:1950,9:1375,10:382,11:99,12:687,13:766,14:1500,15:3617,16:956,17:1633


chrom: chr3
strand: +
right_annotated: ENSG00000240068.1:RPL21P42:processed_pseudogene:464
samples:
,1:75,2:252,3:241,4:308,5:212,6:738,7:510,8:187,9:794,10:695,11:359,12:476,13:451,14:976,15:451,16:1117,17:687


chrom: chr3
strand: -
right_annotated: ENSG00000243069.7:ARHGEF26-AS1:processed_transcript:6580
samples:
,0:79,2:16733,3:22154,4:31713,5:63648,6:101280,7:119517,8:131067,9:136179,10:34512,11:28864,12:34781,13:36017,14:89918,15:82076,16:131253,17:90250


chrom: chr3
strand: +
right_annotated: ENSG00000114790.12:ARHGEF26:protein_coding:5489
samples:
,0:459,1:8247,2:140510,3:160053,4:91437,5:238505,6:242037,7:282917,8:355401,9:255568,10:281068,11:171495,12:151873,13:133140,14:307363,15:252661,16:368755,17:187172


chrom: chr3
strand: -
right_annotated: ENSG00000174953.13:DHX36:protein_coding:10562
samples:
,0:35506,1:28884,2:716544,3:1399137,4:847987,5:1911257,6:950015,7:1357531,8:1003095,9:1070227,10:1659423,11:1885915,12:1771989,13:1651585,14:1824277,15:1252180,16:1544172,17:822680


chrom: chr3
strand: -
right_annotated: ENSG00000279305.1:RP11-316N24.2:TEC:2239
samples:
,2:1399,3:1717,4:1599,5:3634,6:2964,7:2626,8:1399,9:404,10:984,11:2220,12:2205,13:3450,14:3707,15:2737,16:1950,17:606


chrom: chr3
strand: -
right_annotated: ENSG00000174948.5:GPR149:protein_coding:2323
samples:
,2:7172,3:1313,4:2697,5:6643,6:5796,7:4742,8:4466,9:1413,10:1978,11:3396,12:6572,13:9465,14:8376,15:3045,16:6081,17:1836


chrom: chr3
strand: -
right_annotated: ENSG00000240048.1:DDX50P2:processed_pseudogene:2193
samples:
,0:3155,1:2116,2:1033,3:1148,4:564,5:1632,6:790,7:707,8:1814,9:386,10:2243,11:2010,12:1839,13:1778,14:1218,15:2281,16:2513,17:1481


chrom: chr3
strand: +
right_annotated: ENSG00000196549.10:MME:protein_coding:9620
samples:
,0:138560,2:10352,3:13168,4:17666,5:51994,6:9400,7:10928,8:11758,9:25084,10:23064,11:17216,12:26996,13:29624,14:11477,15:8459,16:17754,17:14029


chrom: chr3
strand: -
right_annotated: ENSG00000240666.2:MME-AS1:antisense:828
samples:
,0:3855,2:405,3:393,4:442,5:1888,6:345,7:540,8:923,9:1436,10:1831,11:329,12:1070,13:771,14:714,15:686,16:922,17:420


chrom: chr3
strand: -
right_annotated: ENSG00000114805.16:PLCH1:protein_coding:7173
samples:
,0:204,1:17667,2:170186,3:147125,4:145952,5:309084,6:161258,7:186735,8:397835,9:926175,10:389060,11:216148,12:257953,13:279236,14:241060,15:174509,16:476189,17:638765


chrom: chr3
strand: +
right_annotated: ENSG00000239212.2:RPL6P7:processed_pseudogene:853
samples:
,2:252,3:601,4:230,5:398,6:568,7:194,8:702,9:101,10:5358,11:4461,12:2644,13:2196,14:2861,15:3182,16:3870,17:12964


chrom: chr3
strand: +
right_annotated: ENSG00000241307.1:RP11-674E16.1:processed_pseudogene:601
samples:
,1:102,2:1438,3:1967,4:883,5:3452,6:2919,7:3655,8:2234,9:5777,10:3585,11:2636,12:4463,13:4130,14:6677,15:6244,16:4271,17:4165


chrom: chr3
strand: -
right_annotated: ENSG00000174928.15:C3orf33:protein_coding:2134
samples:
,0:4611,1:9179,2:36702,3:68523,4:50187,5:81534,6:71278,7:85187,8:67622,9:83089,10:89512,11:67306,12:78189,13:66862,14:98465,15:49737,16:81188,17:51775


chrom: chr3
strand: -
right_annotated: ENSG00000169359.13:SLC33A1:protein_coding:9627
samples:
,0:50081,1:22378,2:214193,3:355975,4:215129,5:499626,6:239940,7:400577,8:265927,9:281364,10:597297,11:556592,12:539398,13:533658,14:556709,15:323137,16:568672,17:251994


chrom: chr3
strand: +
right_annotated: ENSG00000163655.15:GMPS:protein_coding:8885
samples:
,0:81285,1:70013,2:708446,3:1266187,4:754969,5:1687837,6:738340,7:1240956,8:840805,9:931641,10:2276210,11:1776073,12:2105943,13:1814091,14:1902818,15:1357993,16:1850454,17:858009


chrom: chr3
strand: +
right_annotated: ENSG00000240489.1:SETP14:processed_pseudogene:873
samples:
,0:99365,1:100838,2:168007,3:244988,4:186077,5:367706,6:176656,7:236437,8:216568,9:168512,10:443511,11:220798,12:341661,13:244884,14:311321,15:117920,16:263288,17:78224


chrom: chr3
strand: +
right_annotated: ENSG00000169282.17:KCNAB1:protein_coding:6852
samples:
,0:2027,1:639,2:61073,3:136689,4:137432,5:212272,6:303821,7:209888,8:224369,9:351751,10:134502,11:281071,12:309693,13:210634,14:523259,15:200871,16:387128,17:306072


chrom: chr3
strand: -
right_annotated: ENSG00000242017.1:ALG1L15P:processed_pseudogene:794
samples:
,0:8456,1:3940,2:4713,3:7746,4:3816,5:10390,6:10188,7:8815,8:8874,9:7194,10:8316,11:7387,12:4210,13:5534,14:3235,15:2867,16:6177,17:3212


chrom: chr3
strand: -
right_annotated: ENSG00000227709.4:RP11-118D22.3:processed_pseudogene:1060
samples:
,0:1887,1:1248,2:500,3:807,4:817,5:2118,6:700,7:1414,8:1396,9:504,10:2279,11:2120,12:1800,13:1671,14:1399,15:909,16:498,17:674


chrom: chr3
strand: -
right_annotated: ENSG00000272990.1:RP11-305K5.1:antisense:508
samples:
,0:20,1:102,2:10035,3:36650,4:13294,5:24029,6:22904,7:27608,8:19475,9:32656,10:16031,11:24862,12:22744,13:18280,14:34538,15:20275,16:33529,17:29383


chrom: chr3
strand: -
right_annotated: ENSG00000114850.6:SSR3:protein_coding:4627
samples:
,0:710059,1:146952,2:521098,3:1023113,4:608936,5:1329121,6:603342,7:964284,8:578584,9:783664,10:1520770,11:1219143,12:1286026,13:1195232,14:1223236,15:686217,16:1019999,17:612513


chrom: chr3
strand: -
right_annotated: ENSG00000243926.1:TIPARP-AS1:antisense:1254
samples:
,0:370,1:1062,2:10701,3:7130,4:6016,5:8939,6:12769,7:4157,8:10715,9:5940,10:11965,11:6465,12:11897,13:5945,14:9570,15:2229,16:10214,17:3505


chrom: chr3
strand: +
right_annotated: ENSG00000163659.12:TIPARP:protein_coding:5048
samples:
,0:93580,1:17029,2:125966,3:235400,4:232864,5:498651,6:266420,7:365908,8:316508,9:466250,10:349998,11:295768,12:524587,13:441048,14:548976,15:322818,16:481738,17:334458


chrom: chr3
strand: -
right_annotated: ENSG00000174912.7:METTL15P1:processed_pseudogene:1045
samples:
,0:3892,1:2661,2:5056,3:11525,4:5080,5:24054,6:10525,7:7733,8:9055,9:11764,10:29887,11:27955,12:21673,13:23103,14:20293,15:10593,16:25928,17:9994


chrom: chr3
strand: -
right_annotated: ENSG00000240875.5:LINC00886:lincRNA:3822
samples:
,0:4344,1:813,2:407,3:2052,4:3402,5:840,6:7332,7:2202,8:2002,9:26161,10:1320,11:3376,12:2648,13:971,14:3979,15:2036,16:1964,17:9656


chrom: chr3
strand: -
right_annotated: ENSG00000230457.3:PA2G4P4:processed_pseudogene:1182
samples:
,0:17464,1:18532,2:65639,3:57504,4:65451,5:83820,6:67309,7:64138,8:86371,9:53839,10:64864,11:36867,12:59236,13:47809,14:48258,15:27542,16:45741,17:26930


chrom: chr3
strand: +
right_annotated: ENSG00000197980.11:LEKR1:protein_coding:5581
samples:
,0:567,1:1259,2:2640,3:6045,4:8099,5:8780,6:8045,7:5200,8:8749,9:6613,10:8850,11:8046,12:10127,13:13090,14:7930,15:6626,16:12113,17:5769


chrom: chr3
strand: -
right_annotated: ENSG00000243629.1:LINC00880:lincRNA:2018
samples:
,0:102,1:102,2:1200,3:808,4:550,5:202,6:600,7:1009,8:200,9:366,10:437,11:688,12:599,13:1195,14:599,16:715,17:604


chrom: chr3
strand: +
right_annotated: ENSG00000241544.1:RP11-6F2.5:lincRNA:1497
samples:
,0:229,1:125,2:1200,3:808,4:412,5:208,6:618,7:780,8:309,9:202,10:1691,11:1948,12:2418,13:3809,14:1592,15:1042,16:4297,17:1451


chrom: chr3
strand: -
right_annotated: ENSG00000163660.11:CCNL1:protein_coding:8729
samples:
,0:76954,1:34972,2:1064604,3:1042588,4:937962,5:1687791,6:1060274,7:1511979,8:1121898,9:772596,10:1814371,11:1290661,12:1275609,13:1817464,14:1222835,15:1238926,16:1271011,17:488035


chrom: chr3
strand: +
right_annotated: ENSG00000201778.1:Y_RNA:misc_RNA:93
samples:
,0:501,1:355,2:7979,3:7919,4:9582,5:21124,6:12343,7:15110,8:12815,9:10821,10:19119,11:14838,12:16861,13:28667,14:18093,15:19356,16:21573,17:7245


chrom: chr3
strand: -
right_annotated: ENSG00000244515.1:KRT18P34:processed_pseudogene:1270
samples:
,0:1208,1:12425,2:6607,3:8193,4:4050,5:17782,6:11555,7:13875,8:10495,9:4044,10:5564,11:9222,12:3716,13:5942,14:7177,15:5256,16:8701,17:3914


chrom: chr3
strand: +
right_annotated: ENSG00000241770.1:RP11-555M1.3:antisense:320
samples:
,0:97,1:582,2:1666,3:2773,4:1035,5:4322,6:3000,7:3560,8:3337,9:1274,10:1850,11:2091,12:1838,13:1782,14:2579,15:2168,16:2366,17:1375


chrom: chr3
strand: +
right_annotated: ENSG00000243176.5:RP11-550I24.2:processed_transcript:1544
samples:
,0:1527,1:45,2:7161,3:5141,4:4319,5:10224,6:7957,7:6718,8:7313,9:4499,10:23620,11:9038,12:15997,13:9514,14:13687,15:6740,16:12847,17:4062


chrom: chr3
strand: -
right_annotated: ENSG00000197415.11:VEPH1:protein_coding:6554
samples:
,0:77557,1:408,2:165712,3:153798,4:109353,5:224041,6:149428,7:119135,8:131185,9:91941,10:483973,11:190702,12:223941,13:165200,14:218166,15:82354,16:183983,17:59076


chrom: chr3
strand: +
right_annotated: ENSG00000163661.3:PTX3:protein_coding:1940
samples:
,0:419512,1:51,2:56624,3:158787,4:168615,5:200679,6:255803,7:161776,8:124775,9:98223,10:133620,11:161731,12:252287,13:145858,14:311312,15:84239,16:123178,17:51489


chrom: chr3
strand: +
right_annotated: ENSG00000174899.10:PQLC2L:protein_coding:3180
samples:
,0:5465,1:204,2:2337,3:4724,4:4782,5:6758,6:10130,7:10201,8:13732,9:20077,10:3334,11:6828,12:4611,13:4220,14:10913,15:8119,16:14041,17:11667


chrom: chr3
strand: +
right_annotated: ENSG00000174891.12:RSRC1:protein_coding:5117
samples:
,0:42206,1:39823,2:160676,3:232570,4:165374,5:329365,6:205468,7:205794,8:199637,9:265072,10:433093,11:317829,12:389424,13:344201,14:403075,15:204319,16:338928,17:179754


chrom: chr3
strand: -
right_annotated: ENSG00000241723.1:RP11-113A11.1:processed_pseudogene:613
samples:
,0:41,1:34,2:1381,3:949,4:376,5:2407,6:1382,7:2226,8:1605,9:742,10:6363,11:7283,12:4047,13:4019,14:2218,15:2143,16:4366,17:2256


chrom: chr3
strand: -
right_annotated: ENSG00000243150.5:RP11-538P18.2:antisense:1696
samples:
,0:2062,1:2029,2:17483,3:30575,4:14089,5:29160,6:24973,7:23339,8:21725,9:26788,10:37948,11:17705,12:26830,13:35976,14:35245,15:15236,16:27319,17:13430


chrom: chr3
strand: +
right_annotated: ENSG00000178053.17:MLF1:protein_coding:3569
samples:
,0:7276,1:7369,2:94873,3:185803,4:93825,5:239679,6:129345,7:188187,8:151250,9:218359,10:206715,11:149880,12:131364,13:158029,14:155758,15:98250,16:166415,17:98357


chrom: chr3
strand: +
right_annotated: ENSG00000168827.14:GFM1:protein_coding:9032
samples:
,0:89296,1:73469,2:469116,3:625714,4:425224,5:797866,6:442409,7:485696,8:465491,9:440867,10:1172141,11:901383,12:954581,13:852241,14:785377,15:491045,16:776507,17:416379


chrom: chr3
strand: -
right_annotated: ENSG00000079257.7:LXN:protein_coding:1504
samples:
,0:10710,1:12648,2:53274,3:51227,4:31161,5:86451,6:50339,7:75124,8:91097,9:41167,10:101996,11:72468,12:66971,13:71104,14:70166,15:59189,16:91856,17:29626


chrom: chr3
strand: -
right_annotated: ENSG00000272087.1:RP11-379F4.7:lincRNA:649
samples:
,0:358,1:269,2:5627,3:11724,4:9685,5:12374,6:5908,7:9265,8:6173,9:12888,10:18367,11:19870,12:23986,13:16612,14:24081,15:15402,16:19129,17:13994


chrom: chr3
strand: +
right_annotated: ENSG00000272440.1:RP11-379F4.6:lincRNA:215
samples:
,0:153,1:216,2:544,3:2475,4:799,5:635,6:962,7:919,8:467,9:730,10:1892,11:3390,12:1812,13:2291,14:1746,15:1761,16:1792,17:1143


chrom: chr3
strand: -
right_annotated: ENSG00000118849.9:RARRES1:protein_coding:2236
samples:
,0:777,1:5201,2:6826,3:9875,4:8332,5:12524,6:15274,7:13784,8:15132,9:8458,10:28735,11:34746,12:21806,13:19288,14:27070,15:28437,16:29479,17:20322


chrom: chr3
strand: +
right_annotated: ENSG00000118855.18:MFSD1:protein_coding:5288
samples:
,0:138856,1:34211,2:169641,3:257440,4:135276,5:320811,6:177897,7:260804,8:216453,9:189091,10:436866,11:257347,12:228439,13:247995,14:234029,15:176439,16:283816,17:136327


chrom: chr3
strand: +
right_annotated: ENSG00000240207.6:RP11-379F4.4:antisense:4177
samples:
,0:458,1:1253,2:9470,3:22201,4:22395,5:27489,6:38951,7:27869,8:22544,9:33932,10:71511,11:77342,12:62347,13:46084,14:97232,15:79829,16:87727,17:63044


chrom: chr3
strand: +
right_annotated: ENSG00000243675.1:RP11-379F4.1:processed_pseudogene:323
samples:
,1:99,2:200,3:746,4:371,5:401,6:926,7:981,8:429,9:936,10:1548,11:2931,12:931,13:783,14:1171,15:3029,16:2668,17:1378


chrom: chr3
strand: +
right_annotated: ENSG00000271778.1:RP11-379F4.8:sense_intronic:578
samples:
,2:1567,3:6514,4:990,5:3583,6:3241,7:8264,8:1480,9:6039,10:2121,11:4332,12:1781,13:1998,14:4066,15:5734,16:2385,17:3862


chrom: chr3
strand: -
right_annotated: ENSG00000272247.1:RP11-379F4.9:antisense:679
samples:
,0:367,1:123,2:1140,3:962,4:600,5:888,6:3279,7:3276,8:1888,9:1432,10:1866,11:4333,12:1846,13:1861,14:4948,15:4126,16:6122,17:2401


chrom: chr3
strand: -
right_annotated: ENSG00000232374.5:GPR79:processed_pseudogene:868
samples:
,2:190,3:945,4:928,5:321,6:722,7:1824,8:989,9:808,10:7113,11:10786,12:9379,13:7094,14:8176,15:9223,16:13353,17:7264


chrom: chr3
strand: +
right_annotated: ENSG00000279311.1:RP11-170K4.2:TEC:1924
samples:
,2:1000,3:1212,4:1240,5:2936,6:1903,7:2788,8:1399,9:3153,10:1591,11:8321,12:10994,13:5739,14:6550,15:14136,16:9612,17:7776


chrom: chr3
strand: +
right_annotated: ENSG00000214216.10:IQCJ:protein_coding:2923
samples:
,2:2776,3:19071,4:10179,5:4652,6:11200,7:94817,8:119765,9:52247,10:101000,11:138176,12:57818,13:19977,14:33280,15:476130,16:557556,17:146693


chrom: chr3
strand: +
right_annotated: ENSG00000283154.1:IQCJ-SCHIP1:protein_coding:1692
samples:
,0:43340,1:9068,2:601830,3:718407,4:691460,5:1238729,6:1021166,7:918293,8:1150585,9:871033,10:826124,11:509935,12:691684,13:690230,14:711222,15:485134,16:907802,17:443673


chrom: chr3
strand: +
right_annotated: ENSG00000283245.1:SCHIP1:protein_coding:1464
samples:
,0:43340,1:9068,2:599738,3:704520,4:685321,5:1245382,6:1020565,7:856976,8:1060300,9:845705,10:799984,11:487202,12:682056,13:694058,14:716136,15:416752,16:783557,17:424438


chrom: chr3
strand: -
right_annotated: ENSG00000244249.1:RP11-441M10.1:processed_pseudogene:685
samples:
,2:185,5:853,6:493,7:1957,8:97,9:404,10:14336,11:23422,12:12032,13:17400,14:18854,15:50517,16:49006,17:40863


chrom: chr3
strand: -
right_annotated: ENSG00000243116.1:RP11-564C24.1:processed_pseudogene:878
samples:
,0:123,4:200,5:196,6:918,7:554,8:296,9:1543,10:2504,11:4307,12:1893,13:4507,14:2610,15:14518,16:8805,17:8213


chrom: chr3
strand: -
right_annotated: ENSG00000241211.1:IQCJ-SCHIP1-AS1:antisense:592
samples:
,0:265,1:308,2:112,5:1087,6:200,7:955,8:232,9:202,10:2940,11:8697,12:8104,13:8641,14:10865,15:18943,16:16920,17:11924


chrom: chr3
strand: +
right_annotated: ENSG00000151967.18:SCHIP1:protein_coding:7645
samples:
,0:30937,1:8084,2:853632,3:1002750,4:868370,5:1622260,6:1113916,7:1153541,8:1169824,9:1037101,10:1356167,11:921259,12:962171,13:1018893,14:951025,15:623225,16:992669,17:538012


chrom: chr3
strand: -
right_annotated: ENSG00000244040.5:IL12A-AS1:antisense:3689
samples:
,0:245,2:757,3:1736,4:1550,5:4053,6:6068,7:5065,8:6609,9:9386,10:445,11:2852,12:2144,13:5570,14:7404,15:4450,16:9163,17:12558


chrom: chr3
strand: +
right_annotated: ENSG00000168811.6:IL12A:protein_coding:2040
samples:
,0:1972,1:204,2:7772,3:7279,4:7335,5:10826,6:19689,7:8104,8:9432,9:5411,10:7043,11:3228,12:5877,13:4975,14:14340,15:4953,16:10568,17:4715


chrom: chr3
strand: +
right_annotated: ENSG00000184100.6:BRD7P2:processed_pseudogene:1944
samples:
,0:21176,1:17728,2:259337,3:244528,4:214530,5:367005,6:209304,7:230928,8:247832,9:194714,10:339762,11:161177,12:271269,13:170796,14:268041,15:137366,16:242846,17:76421


chrom: chr3
strand: +
right_annotated: ENSG00000180044.4:C3orf80:protein_coding:2578
samples:
,0:1298,1:1069,2:3643,3:9879,4:14198,5:34737,6:74507,7:90214,8:92974,9:145990,10:627,11:12585,12:6027,13:47404,14:59752,15:61801,16:112403,17:139364


chrom: chr3
strand: -
right_annotated: ENSG00000248710.1:RP11-432B6.3:protein_coding:3360
samples:
,0:60324,1:23962,2:305778,3:494544,4:272528,5:773286,6:317785,7:580683,8:519011,9:587460,10:942198,11:497993,12:503003,13:574740,14:533013,15:366527,16:687059,17:317998


chrom: chr3
strand: -
right_annotated: ENSG00000068885.14:IFT80:protein_coding:7175
samples:
,0:54999,1:30248,2:481721,3:718488,4:413381,5:1169688,6:511630,7:946227,8:838730,9:1006965,10:1234023,11:714624,12:699961,13:900906,14:834626,15:641674,16:1092642,17:556418


chrom: chr3
strand: +
right_annotated: ENSG00000113810.15:SMC4:protein_coding:8457
samples:
,0:190073,1:116046,2:1842911,3:2062104,4:1452719,5:2896430,6:543272,7:1228758,8:675563,9:419323,10:4047916,11:2099029,12:2359658,13:1924839,14:1091280,15:918642,16:1002513,17:258414


chrom: chr3
strand: -
right_annotated: ENSG00000213186.7:TRIM59:protein_coding:7865
samples:
,0:124938,1:47190,2:521251,3:884391,4:410805,5:980163,6:161684,7:486610,8:230083,9:129232,10:1683088,11:955268,12:720752,13:725792,14:310138,15:278347,16:323485,17:78593


chrom: chr3
strand: +
right_annotated: ENSG00000244009.1:B3GAT3P1:processed_pseudogene:806
samples:
,0:3254,1:1717,2:12115,3:3665,4:9206,5:5738,6:12796,7:4277,8:16433,9:4343,10:5326,11:3232,12:2642,13:2477,14:2288,15:1757,16:5331,17:2534


chrom: chr3
strand: -
right_annotated: ENSG00000186432.8:KPNA4:protein_coding:9413
samples:
,0:150522,1:79087,2:988830,3:1507954,4:1012414,5:2017149,6:981325,7:1478949,8:1124289,9:1114789,10:2240960,11:1876002,12:2234710,13:2086580,14:2029196,15:1330854,16:1906321,17:1033788


chrom: chr3
strand: -
right_annotated: ENSG00000238741.1:SCARNA7:scaRNA:330
samples:
,0:158372,1:81739,2:1599,3:404,4:3397,5:1412,6:1799,7:1081,8:200,9:2020,10:2875369,11:4319944,12:3788016,13:4609329,14:3925999,15:2663153,16:3187164,17:1765981


chrom: chr3
strand: +
right_annotated: ENSG00000229320.3:KRT8P12:transcribed_processed_pseudogene:2047
samples:
,0:4228,1:4664,2:63516,3:50317,4:35849,5:46348,6:25593,7:40447,8:43027,9:25277,10:46537,11:28920,12:29553,13:25712,14:19781,15:18262,16:29250,17:10133


chrom: chr3
strand: +
right_annotated: ENSG00000242285.1:RPL6P8:processed_pseudogene:843
samples:
,2:346,3:153,5:368,6:147,7:95,8:152,9:374,10:3217,11:1297,12:1507,13:606,14:1155,15:52,16:569,17:691


chrom: chr3
strand: -
right_annotated: ENSG00000260572.1:RP11-16N11.2:antisense:1715
samples:
,0:202,1:285,2:16566,3:12809,4:20505,5:28640,6:30267,7:18406,8:36900,9:17144,10:21946,11:22282,12:19191,13:26220,14:29773,15:16377,16:37021,17:16386


chrom: chr3
strand: +
right_annotated: ENSG00000163590.13:PPM1L:protein_coding:12447
samples:
,0:509,1:713,2:2744585,3:3545548,4:2608272,5:4002928,6:1628307,7:2425330,8:1677644,9:1884933,10:3523657,11:4912001,12:4799013,13:2873761,14:3308164,15:2513074,16:3198775,17:1758845


chrom: chr3
strand: -
right_annotated: ENSG00000169255.13:B3GALNT1:protein_coding:4183
samples:
,0:13367,2:445872,3:857663,4:584080,5:1151968,6:902112,7:1333204,8:928427,9:1439771,10:1040408,11:840959,12:985187,13:807233,14:1266851,15:740078,16:1280410,17:831321


chrom: chr3
strand: +
right_annotated: ENSG00000169251.12:NMD3:protein_coding:4869
samples:
,0:71144,1:39005,2:254176,3:437566,4:240076,5:600006,6:285469,7:372714,8:304374,9:289790,10:869479,11:614581,12:657119,13:631843,14:636538,15:331839,16:521257,17:267646


chrom: chr3
strand: -
right_annotated: ENSG00000240138.1:EEF1GP4:processed_pseudogene:1307
samples:
,0:46,1:85,2:838,3:1328,4:676,5:1201,6:822,7:512,8:2081,9:601,10:5246,11:3829,12:3123,13:3534,14:3086,15:1522,16:3531,17:1625


chrom: chr3
strand: -
right_annotated: ENSG00000243838.1:PSMC1P7:processed_pseudogene:1315
samples:
,0:135,1:49,2:552,3:1658,4:417,5:978,6:531,7:775,8:1096,9:940,10:2132,11:2837,12:3314,13:943,14:3130,15:2010,16:2565,17:2610


chrom: chr3
strand: -
right_annotated: ENSG00000196542.8:SPTSSB:protein_coding:3745
samples:
,2:9001,3:11552,4:22536,5:29682,6:28439,7:38395,8:37481,9:40157,10:17607,11:21405,12:29252,13:25904,14:34287,15:28794,16:41349,17:29446


chrom: chr3
strand: +
right_annotated: ENSG00000240567.1:RP11-3P17.4:lincRNA:2845
samples:
,0:81408,1:93625,2:1434204,3:1590760,4:1102486,5:3113688,6:1578974,7:2104223,8:2098651,9:1120465,10:1550070,11:731442,12:1314559,13:1334044,14:1276980,15:623126,16:1441162,17:394598


chrom: chr3
strand: +
right_annotated: ENSG00000269888.1:RP11-3P17.5:lincRNA:248
samples:
,0:125459,1:151282,2:2651313,3:3171650,4:1958746,5:5886903,6:2342812,7:3330053,8:3669652,9:2207062,10:1888562,11:943054,12:1747573,13:1846732,14:1672104,15:760030,16:2465491,17:540754


chrom: chr3
strand: -
right_annotated: ENSG00000234851.4:RPL23AP42:processed_pseudogene:471
samples:
,0:247012,1:292621,2:4758562,3:5280079,4:3556118,5:10027700,6:4667260,7:6203454,8:6700568,9:3703720,10:4091438,11:1903589,12:3687478,13:3667886,14:3567135,15:1663327,16:4603417,17:1108630


chrom: chr3
strand: -
right_annotated: ENSG00000121871.3:SLITRK3:protein_coding:4892
samples:
,2:73752,3:68954,4:266408,5:165160,6:387172,7:126186,8:206351,9:270358,10:83642,11:71692,12:267465,13:119299,14:374371,15:111759,16:170594,17:191468


chrom: chr3
strand: +
right_annotated: ENSG00000244128.5:LINC01322:lincRNA:1860
samples:
,1:488,2:5240,3:4120,4:21979,5:9437,6:49233,7:5724,8:12362,9:16897,10:18671,11:10073,12:57457,13:14050,14:95679,15:7351,16:26450,17:20466


chrom: chr3
strand: -
right_annotated: ENSG00000114200.9:BCHE:protein_coding:3082
samples:
,1:2394,2:75589,3:103877,4:59438,5:130886,6:69955,7:75022,8:95459,9:112895,10:235437,11:96077,12:107045,13:89728,14:104743,15:41332,16:120494,17:58858


chrom: chr3
strand: +
right_annotated: ENSG00000220343.5:RP11-440K22.1:processed_pseudogene:490
samples:
,0:51,1:257,2:100,4:395,5:610,6:947,7:272,8:577,9:343,10:631,11:348,12:280,13:505,14:832,15:56,16:564,17:358


chrom: chr3
strand: -
right_annotated: ENSG00000169064.12:ZBBX:protein_coding:3972
samples:
,2:11819,3:23693,4:12886,5:41325,6:24530,7:33671,8:29306,9:106627,10:39432,11:35881,12:28341,13:53569,14:57622,15:39045,16:50427,17:77109


chrom: chr3
strand: -
right_annotated: ENSG00000114204.14:SERPINI2:protein_coding:2835
samples:
,2:2568,3:7899,4:2692,5:8380,6:2556,7:5482,8:2714,9:2498,10:9391,11:14235,12:7519,13:9650,14:3741,15:5717,16:7624,17:2500


chrom: chr3
strand: -
right_annotated: ENSG00000174776.10:WDR49:protein_coding:3891
samples:
,0:49,2:9231,3:15300,4:9332,5:31596,6:5453,7:13710,8:14373,9:3137,10:90385,11:94484,12:81361,13:92885,14:50959,15:60123,16:83797,17:20936


chrom: chr3
strand: -
right_annotated: ENSG00000114209.14:PDCD10:protein_coding:3275
samples:
,0:42870,1:26594,2:227254,3:313391,4:225195,5:404379,6:201688,7:290332,8:263861,9:214381,10:521621,11:400767,12:372429,13:350116,14:329227,15:217965,16:335651,17:169052


chrom: chr3
strand: -
right_annotated: ENSG00000241120.1:HMGN1P8:processed_pseudogene:288
samples:
,0:115,1:46,2:1351,3:3171,4:2407,5:3118,6:1786,7:1421,8:1019,9:2083,10:11603,11:14334,12:14795,13:9480,14:16944,15:13381,16:10469,17:7220


chrom: chr3
strand: +
right_annotated: ENSG00000163536.12:SERPINI1:protein_coding:2418
samples:
,0:1020,1:2371,2:653097,3:992853,4:403493,5:1386528,6:488218,7:1105529,8:1109272,9:3062283,10:1037635,11:684982,12:550738,13:784968,14:568990,15:459646,16:1132587,17:1287896


chrom: chr3
strand: +
right_annotated: ENSG00000244227.6:LINC01330:transcribed_unitary_pseudogene:5387
samples:
,2:1648,3:3737,4:1915,5:4015,6:2189,7:1100,8:1629,9:31044,10:5797,11:8297,12:4726,13:4253,14:4871,15:2137,16:3868,17:34173


chrom: chr3
strand: -
right_annotated: ENSG00000173905.8:GOLIM4:protein_coding:4647
samples:
,0:238595,1:35461,2:667176,3:501073,4:334686,5:782261,6:253482,7:559189,8:484364,9:139954,10:1280295,11:632908,12:605307,13:608062,14:419512,15:512595,16:676960,17:124096


chrom: chr3
strand: +
right_annotated: ENSG00000206120.11:EGFEM1P:transcribed_unitary_pseudogene:4658
samples:
,2:55139,3:50983,4:162984,5:46638,6:115721,7:39171,8:39254,9:31771,10:703986,11:557620,12:705078,13:149668,14:620708,15:115868,16:187884,17:214877


chrom: chr3
strand: +
right_annotated: ENSG00000226765.1:RPSAP33:processed_pseudogene:865
samples:
,2:155,3:98,4:600,5:595,6:1465,7:404,8:182,9:505,10:12477,11:11373,12:15738,13:2584,14:11737,15:2220,16:4710,17:5051


chrom: chr3
strand: -
right_annotated: ENSG00000231688.1:RPL21P43:processed_pseudogene:472
samples:
,2:790,3:2334,4:2379,5:404,6:469,7:712,8:274,9:475,10:12604,11:16776,12:9584,13:907,14:6389,15:2379,16:2677,17:6425


chrom: chr3
strand: +
right_annotated: ENSG00000242268.2:RP11-368I23.2:lincRNA:710
samples:
,2:17903,3:42399,4:22941,5:15625,6:49756,7:7931,8:8910,9:25716,10:59626,11:50231,12:46823,13:9061,14:75219,15:8215,16:14150,17:21913


chrom: chr3
strand: +
right_annotated: ENSG00000272797.1:RP11-368I23.3:lincRNA:445
samples:
,2:2938,3:21311,4:13244,5:5554,6:14488,7:3975,8:4187,9:11472,10:15448,11:20698,12:18785,13:4397,14:24720,15:2958,16:5477,17:8552


chrom: chr3
strand: +
right_annotated: ENSG00000273177.1:RP11-368I23.4:lincRNA:430
samples:
,2:938,3:5899,4:2914,5:1350,6:3467,7:1167,8:708,9:2491,10:4532,11:14211,12:8289,13:1601,14:7861,15:1613,16:904,17:3073


chrom: chr3
strand: -
right_annotated: ENSG00000085276.17:MECOM:protein_coding:9103
samples:
,0:13859,1:420,2:27344,3:45454,4:32213,5:77260,6:41128,7:58699,8:67184,9:58214,10:84918,11:64111,12:83233,13:79787,14:77759,15:48914,16:115659,17:44073


chrom: chr3
strand: -
right_annotated: ENSG00000213178.3:RP11-641D5.1:processed_pseudogene:410
samples:
,0:161751,1:89679,2:2171936,3:2371373,4:1955083,5:3804455,6:2491270,7:2664768,8:2805811,9:1534236,10:2599785,11:1209779,12:2609947,13:1794203,14:2436846,15:1218957,16:2481739,17:589729


chrom: chr3
strand: +
right_annotated: ENSG00000281137.1:AC074033.1:protein_coding:45
samples:
,0:20541,1:11359,2:279133,3:234980,4:241474,5:422123,6:321424,7:294262,8:369968,9:168792,10:312442,11:113850,12:367992,13:204023,14:342047,15:154569,16:337139,17:65367


chrom: chr3
strand: +
right_annotated: ENSG00000244381.1:RP11-3K16.1:processed_pseudogene:471
samples:
,0:5924,1:2251,2:484,3:291,4:473,5:294,6:461,7:101,8:494,9:377,10:876,11:391,12:200,13:277,14:473,15:195,16:586


chrom: chr3
strand: -
right_annotated: ENSG00000270141.3:TERC:lincRNA:541
samples:
,0:48303,1:63050,2:600,3:396,4:1588,5:676,6:2098,7:606,8:999,9:359,10:110700,11:84206,12:122221,13:170807,14:69164,15:57462,16:94734,17:36104


chrom: chr3
strand: -
right_annotated: ENSG00000277925.1:Telomerase-vert:misc_RNA:438
samples:
,0:48152,1:62907,2:570,3:248,4:1498,5:606,6:1766,7:606,8:742,9:336,10:110342,11:83675,12:121537,13:169532,14:68580,15:57071,16:93683,17:35131


chrom: chr3
strand: -
right_annotated: ENSG00000184378.2:ACTRT3:protein_coding:2005
samples:
,0:5914,1:2239,2:4189,3:3586,4:1685,5:7316,6:14100,7:13048,8:18779,9:28122,10:5679,11:3353,12:4333,13:9526,14:15304,15:9135,16:33082,17:23896


chrom: chr3
strand: +
right_annotated: ENSG00000269889.1:RP11-816J6.3:antisense:843
samples:
,0:811,1:281,2:300,3:1335,4:353,5:802,6:1528,7:1094,8:1059,9:1909,10:1565,11:1426,12:1786,13:2728,14:2880,15:1575,16:3838,17:1886


chrom: chr3
strand: +
right_annotated: ENSG00000085274.15:MYNN:protein_coding:5730
samples:
,0:28258,1:16372,2:267469,3:385042,4:261657,5:561989,6:296782,7:415732,8:369595,9:280575,10:775810,11:601450,12:579186,13:627665,14:558487,15:390681,16:605704,17:251492


chrom: chr3
strand: -
right_annotated: ENSG00000269984.1:RP11-362K14.5:antisense:3143
samples:
,0:11301,1:6499,2:108729,3:155620,4:109145,5:228708,6:119081,7:156197,8:150515,9:125217,10:279088,11:202548,12:246240,13:221582,14:227451,15:150458,16:253644,17:89909


chrom: chr3
strand: -
right_annotated: ENSG00000171757.15:LRRC34:protein_coding:4851
samples:
,0:2684,1:306,2:42794,3:73279,4:57408,5:84772,6:62672,7:89073,8:68213,9:78020,10:124913,11:104469,12:90967,13:114670,14:112455,15:71824,16:104047,17:65419


chrom: chr3
strand: +
right_annotated: ENSG00000270135.1:RP11-362K14.7:antisense:472
samples:
,2:3693,3:10257,4:4337,5:10500,6:4954,7:9348,8:7270,9:7511,10:10399,11:16044,12:13100,13:13836,14:19556,15:9554,16:10363,17:7366


chrom: chr3
strand: +
right_annotated: ENSG00000270096.1:RP11-362K14.6:antisense:1252
samples:
,0:473,1:204,2:8432,3:22619,4:13965,5:26134,6:16852,7:31854,8:21311,9:22471,10:41669,11:36040,12:26949,13:44614,14:35909,15:27943,16:32550,17:24348


chrom: chr3
strand: +
right_annotated: ENSG00000188306.6:LRRIQ4:protein_coding:1827
samples:
,2:1695,3:2018,4:1115,5:783,6:1499,7:1010,8:2622,9:1309,10:1000,11:1686,12:2832,13:4359,14:8415,15:1492,16:7530,17:1623


chrom: chr3
strand: -
right_annotated: ENSG00000114248.9:LRRC31:protein_coding:3113
samples:
,1:102,2:53,3:840,5:452,6:1039,7:286,8:542,9:414,10:363,11:915,12:402,13:830,14:1230,15:1232,16:868,17:585


chrom: chr3
strand: -
right_annotated: ENSG00000239219.2:RP11-379K17.4:antisense:7977
samples:
,0:3312,1:51,2:2379,3:5053,4:6385,5:6123,6:10318,7:10962,8:6741,9:5756,10:6511,11:5445,12:6965,13:5345,14:13258,15:10588,16:8295,17:5011


chrom: chr3
strand: -
right_annotated: ENSG00000244193.1:RP11-379K17.5:transcribed_processed_pseudogene:768
samples:
,0:3083,1:51,2:526,3:908,4:799,5:946,6:1328,7:807,8:599,9:808,10:697,11:749,12:584,13:672,14:1728,15:928,16:800,17:847


chrom: chr3
strand: +
right_annotated: ENSG00000008952.16:SEC62:protein_coding:7928
samples:
,0:165894,1:69495,2:1028144,3:1850072,4:1259598,5:2508567,6:1328737,7:1924023,8:1487493,9:1775757,10:2467589,11:2258105,12:2569565,13:2508726,14:3147059,15:1800084,16:2847013,17:1579623


chrom: chr3
strand: -
right_annotated: ENSG00000240373.1:SEC62-AS1:antisense:346
samples:
,0:250,1:127,2:1859,3:3974,4:5202,5:4439,6:2857,7:3634,8:4808,9:6107,10:8463,11:9476,12:12157,13:8611,14:10212,15:8314,16:9710,17:5432


chrom: chr3
strand: +
right_annotated: ENSG00000173890.16:GPR160:protein_coding:4458
samples:
,0:298,1:1613,2:989,3:1247,4:2820,5:3183,6:22161,7:3417,8:11368,9:5153,10:11078,11:18980,12:11765,13:12494,14:31202,15:10501,16:22042,17:10998


chrom: chr3
strand: -
right_annotated: ENSG00000173889.15:PHC3:protein_coding:16919
samples:
,0:44229,1:23991,2:627029,3:1073670,4:816330,5:1600667,6:811404,7:1286620,8:878870,9:892416,10:1824084,11:2218604,12:2042735,13:1804796,14:2128155,15:2008982,16:2099816,17:1136044


chrom: chr3
strand: +
right_annotated: ENSG00000268220.1:RP11-379K17.12:antisense:1781
samples:
,0:4092,1:3003,2:94237,3:250881,4:133594,5:247999,6:115013,7:243240,8:129056,9:172544,10:187347,11:251011,12:201415,13:189241,14:203558,15:198348,16:206929,17:122312


chrom: chr3
strand: +
right_annotated: ENSG00000163558.12:PRKCI:protein_coding:5841
samples:
,0:80566,1:34890,2:431884,3:691221,4:549565,5:1064236,6:547461,7:853103,8:608519,9:694136,10:1098209,11:875759,12:1081251,13:1089206,14:1061900,15:754652,16:1110171,17:589446


chrom: chr3
strand: +
right_annotated: ENSG00000136603.13:SKIL:protein_coding:7782
samples:
,0:64587,1:76994,2:242932,3:399237,4:303598,5:559929,6:221663,7:371148,8:233068,9:341603,10:1739145,11:1582599,12:1325989,13:1507412,14:1304058,15:986477,16:1183531,17:787342


chrom: chr3
strand: +
right_annotated: ENSG00000242578.1:RP11-469J4.3:lincRNA:664
samples:
,0:141,2:181,3:2342,4:598,5:816,6:555,7:861,8:1017,9:681,10:896,11:2261,12:1416,13:783,14:557,15:756,16:782


chrom: chr3
strand: +
right_annotated: ENSG00000013297.10:CLDN11:protein_coding:6032
samples:
,0:52987,1:38,2:14309,3:23969,4:16501,5:23333,6:14218,7:11085,8:68371,9:11799,10:23668,11:25177,12:19522,13:17452,14:14671,15:8871,16:66684,17:13596


chrom: chr3
strand: -
right_annotated: ENSG00000013293.5:SLC7A14:protein_coding:10459
samples:
,0:8228,2:67469,3:127900,4:79339,5:105112,6:105113,7:114070,8:131985,9:271830,10:105634,11:147821,12:160173,13:86727,14:200480,15:102406,16:230911,17:230117


chrom: chr3
strand: -
right_annotated: ENSG00000163584.17:RPL22L1:protein_coding:2326
samples:
,0:43660,1:43873,2:93425,3:159467,4:63849,5:147692,6:63182,7:94077,8:61924,9:47151,10:227557,11:76457,12:102771,13:81836,14:69429,15:37245,16:80823,17:23542


chrom: chr3
strand: -
right_annotated: ENSG00000163577.7:EIF5A2:protein_coding:5593
samples:
,0:35351,1:7437,2:44846,3:69753,4:49039,5:84893,6:47263,7:52061,8:48506,9:60212,10:134139,11:125869,12:96962,13:100031,14:100979,15:68407,16:93120,17:59609


chrom: chr3
strand: -
right_annotated: ENSG00000154310.16:TNIK:protein_coding:8523
samples:
,0:26822,1:1480,2:2616560,3:3798999,4:3725864,5:4460663,6:3352125,7:2879940,8:2664711,9:2973074,10:4360993,11:4290209,12:6515534,13:3212425,14:5374828,15:2909134,16:4227797,17:2539313


chrom: chr3
strand: +
right_annotated: ENSG00000279673.1:RP11-185E8.2:TEC:1645
samples:
,0:2802,1:910,2:10673,3:15152,4:15201,5:17568,6:20045,7:13771,8:13585,9:15247,10:16359,11:9516,12:21071,13:8912,14:13998,15:4816,16:12466,17:6815


chrom: chr3
strand: +
right_annotated: ENSG00000234594.1:RP11-263C16.2:processed_pseudogene:193
samples:
,2:3223,3:5244,4:2260,5:4383,6:1824,7:4203,8:6050,9:5339,10:1100,11:1042,12:1931,13:2440,14:2914,15:2013,16:1705,17:2578


chrom: chr3
strand: -
right_annotated: ENSG00000075651.15:PLD1:protein_coding:12859
samples:
,0:6761,1:10474,2:14545,3:16424,4:24041,5:83427,6:31938,7:61561,8:62105,9:10023,10:21234,11:26643,12:50421,13:69813,14:64685,15:64660,16:107729,17:11698


chrom: chr3
strand: +
right_annotated: ENSG00000075420.12:FNDC3B:protein_coding:13270
samples:
,0:153459,1:44535,2:182277,3:137705,4:127495,5:340721,6:126232,7:279909,8:277688,9:149786,10:411249,11:343282,12:308720,13:509673,14:334920,15:461214,16:627357,17:199634


chrom: chr3
strand: -
right_annotated: ENSG00000279862.1:RP11-423E7.2:TEC:1399
samples:
,0:195,1:102,3:302,5:202,6:200,9:202,10:5818,11:6668,12:2536,13:4786,14:4307,15:12280,16:6588,17:3417


chrom: chr3
strand: -
right_annotated: ENSG00000236686.1:BZW1P1:processed_pseudogene:1240
samples:
,0:5765,1:4078,2:2901,3:2041,4:1340,5:3250,6:1973,7:1419,8:1716,9:1664,10:6427,11:1673,12:4538,13:2216,14:3218,15:1159,16:3270,17:1560


chrom: chr3
strand: -
right_annotated: ENSG00000121858.10:TNFSF10:protein_coding:3473
samples:
,1:408,2:10151,3:15724,4:5340,5:38715,6:16460,7:15070,8:31923,9:25069,10:18939,11:10330,12:10270,13:25734,14:24481,15:7914,16:28562,17:9191


chrom: chr3
strand: -
right_annotated: ENSG00000224426.1:SLC31A1P1:processed_pseudogene:567
samples:
,0:408,1:79,2:595,3:1209,4:300,5:705,6:200,7:704,8:397,9:905,10:991,11:1393,12:500,13:303,14:494,15:303,16:397,17:505


chrom: chr3
strand: -
right_annotated: ENSG00000144959.9:NCEH1:protein_coding:4808
samples:
,0:92407,1:28410,2:31182,3:46115,4:33693,5:202850,6:63732,7:140596,8:158204,9:445063,10:19972,11:52544,12:59909,13:129978,14:79919,15:90125,16:212639,17:258245


chrom: chr3
strand: +
right_annotated: ENSG00000114346.13:ECT2:protein_coding:5499
samples:
,0:117943,1:168592,2:371102,3:442325,4:259276,5:665284,6:133920,7:237678,8:100227,9:70137,10:1467955,11:639526,12:582836,13:555424,14:248615,15:163735,16:157948,17:49250


chrom: chr3
strand: -
right_annotated: ENSG00000227440.1:ATP5G1P4:processed_pseudogene:441
samples:
,0:901,1:617,2:1227,3:853,4:490,5:2200,6:200,7:446,8:151,10:1981,11:974,12:1018,13:1299,14:183,15:170,16:169,17:44


chrom: chr3
strand: +
right_annotated: ENSG00000169760.17:NLGN1:protein_coding:10148
samples:
,0:9165,1:101,2:801935,3:1299219,4:780315,5:1303594,6:524668,7:625434,8:522625,9:568566,10:4462299,11:4147315,12:2814316,13:2152277,14:1782719,15:1109448,16:1652129,17:818570


chrom: chr3
strand: -
right_annotated: ENSG00000228213.5:NLGN1-AS1:antisense:815
samples:
,0:51,3:1352,4:102,5:139,7:618,9:359,10:299182,11:299515,12:141981,13:73537,14:73393,15:72263,16:82879,17:40530


chrom: chr3
strand: +
right_annotated: ENSG00000213169.3:RP11-393N4.2:processed_pseudogene:762
samples:
,0:14599,1:12386,2:624,3:141,4:271,5:239,6:1451,7:195,8:700,9:73,10:1914,11:552,12:1083,13:350,14:825,15:78,16:961


chrom: chr3
strand: +
right_annotated: ENSG00000177694.15:NAALADL2:protein_coding:13592
samples:
,0:11737,1:25,2:28723,3:31691,4:29720,5:46147,6:21463,7:17165,8:14526,9:15356,10:281911,11:177581,12:145850,13:100390,14:84648,15:55125,16:77637,17:40590


chrom: chr3
strand: -
right_annotated: ENSG00000230497.2:EEF1B2P8:processed_pseudogene:671
samples:
,2:515,3:88,4:156,5:1238,6:638,7:636,8:645,9:433,10:5401,11:3621,12:1175,13:635,14:2217,15:1248,16:2417,17:294


chrom: chr3
strand: -
right_annotated: ENSG00000214192.3:UBE2V1P2:processed_pseudogene:440
samples:
,0:7001,1:1708,2:57299,3:62611,4:52407,5:108971,6:39788,7:58849,8:67686,9:90093,10:17158,11:15437,12:21874,13:25889,14:25041,15:23876,16:21386,17:26609


chrom: chr3
strand: -
right_annotated: ENSG00000230362.1:ACTG1P23:processed_pseudogene:1074
samples:
,0:439,1:95,2:473,3:224,4:425,5:571,6:1249,7:92,8:1290,10:603,11:98,12:456,13:116,14:183,15:100,16:627,17:98


chrom: chr3
strand: -
right_annotated: ENSG00000223715.1:LINC01208:lincRNA:1040
samples:
,2:300,3:606,4:28,5:1086,6:701,7:858,8:610,9:303,10:1121,11:580,12:595,13:308,14:527,15:967,16:1458,17:725


chrom: chr3
strand: -
right_annotated: ENSG00000231888.1:MTND5P15:processed_pseudogene:349
samples:
,1:102,2:228,4:315,5:811,6:1013,7:756,8:1086,9:110,10:2443,11:7000,12:4979,13:3479,14:3977,15:4365,16:6699,17:3121


chrom: chr3
strand: -
right_annotated: ENSG00000177565.16:TBL1XR1:protein_coding:11603
samples:
,0:149191,1:97806,2:941598,3:1708413,4:1162433,5:2670014,6:1283035,7:2237543,8:1476307,9:1721250,10:5662259,11:4649234,12:4578643,13:4638142,14:4545284,15:3249892,16:5077258,17:2672505


chrom: chr3
strand: +
right_annotated: ENSG00000231310.3:TBL1XR1-AS1:antisense:855
samples:
,0:2624,1:1935,2:26211,3:24649,4:27308,5:71389,6:32282,7:34260,8:45957,9:47944,10:120568,11:107626,12:138675,13:115297,14:138243,15:100409,16:149276,17:74390


chrom: chr3
strand: +
right_annotated: ENSG00000203645.2:LINC00501:lincRNA:2046
samples:
,1:102,2:699,3:1184,4:495,5:1897,6:1298,7:1161,8:1297,9:2464,10:874,11:1408,12:676,13:967,14:826,15:1384,16:2262,17:1254


chrom: chr3
strand: +
right_annotated: ENSG00000228221.5:LINC00578:lincRNA:1234
samples:
,0:3260,1:49,3:334,5:1237,6:351,7:2222,8:768,9:907,10:108,11:857,12:789,13:627,14:1122,15:2139,16:1288,17:1484


chrom: chr3
strand: -
right_annotated: ENSG00000223930.5:RP11-33A14.1:lincRNA:2784
samples:
,2:374,3:400,4:217,5:808,6:868,7:1237,8:1702,9:4561,10:1440,11:1337,12:1068,13:1221,14:3710,15:3699,16:6476,17:7028


chrom: chr3
strand: +
right_annotated: ENSG00000197584.11:KCNMB2:protein_coding:3542
samples:
,2:7019,3:32474,4:30741,5:23335,6:50519,7:40078,8:55224,9:68863,10:26855,11:40794,12:67243,13:27322,14:77248,15:36667,16:89447,17:51730


chrom: chr3
strand: +
right_annotated: ENSG00000275163.1:RP11-385J1.3:protein_coding:1391
samples:
,2:5052,3:18046,4:17791,5:14654,6:30539,7:22232,8:34254,9:32964,10:13768,11:14561,12:25754,13:12453,14:33672,15:12284,16:39066,17:23220


chrom: chr3
strand: -
right_annotated: ENSG00000237978.5:KCNMB2-AS1:antisense:1691
samples:
,0:153,2:610,3:882,4:541,5:1139,6:997,7:1289,8:1747,9:714,10:3281,11:7867,12:6874,13:2124,14:5481,15:6850,16:11273,17:7502


chrom: chr3
strand: -
right_annotated: ENSG00000172667.10:ZMAT3:protein_coding:9646
samples:
,0:78810,1:8074,2:109429,3:216637,4:133301,5:247029,6:103852,7:192918,8:160503,9:178311,10:414270,11:402253,12:351561,13:300203,14:297044,15:227228,16:357549,17:238065


chrom: chr3
strand: +
right_annotated: ENSG00000121879.3:PIK3CA:protein_coding:9411
samples:
,0:52172,1:9629,2:522831,3:1102844,4:873107,5:1588239,6:871763,7:1211302,8:843607,9:976761,10:1559441,11:1968747,12:2165274,13:1864682,14:2309647,15:1390344,16:2012599,17:1034389


chrom: chr3
strand: -
right_annotated: ENSG00000201957.1:SNORA25:snoRNA:128
samples:
,3:102,4:58,5:85,6:70,7:176,8:42,9:311,10:2495,11:5108,12:3412,13:3635,14:4978,15:5677,16:5453,17:3211


chrom: chr3
strand: -
right_annotated: ENSG00000171121.16:KCNMB3:protein_coding:8979
samples:
,0:4617,1:1572,2:129740,3:316385,4:196354,5:384379,6:220008,7:372223,8:210860,9:296455,10:368253,11:492281,12:415001,13:404264,14:471487,15:336379,16:448980,17:253008


chrom: chr3
strand: -
right_annotated: ENSG00000240429.1:LRRFIP1P1:processed_pseudogene:2246
samples:
,0:4265,1:1280,2:47972,3:30892,4:41772,5:96440,6:67620,7:47844,8:66917,9:63137,10:82335,11:60361,12:83553,13:78445,14:120570,15:87203,16:114469,17:62866


chrom: chr3
strand: +
right_annotated: ENSG00000121864.9:ZNF639:protein_coding:6859
samples:
,0:32915,1:17861,2:379921,3:626349,4:513047,5:916536,6:474556,7:758908,8:493628,9:579998,10:1032141,11:757518,12:1028220,13:854129,14:999923,15:480920,16:894550,17:445476


chrom: chr3
strand: +
right_annotated: ENSG00000260743.1:RP11-255C15.3:lincRNA:1566
samples:
,0:325,1:124,2:2229,3:6118,4:3093,5:7224,6:3978,7:6269,8:3013,9:6284,10:28413,11:30948,12:27987,13:35158,14:31481,15:17418,16:24737,17:18496


chrom: chr3
strand: +
right_annotated: ENSG00000171109.18:MFN1:protein_coding:5957
samples:
,0:101975,1:39522,2:471291,3:1009055,4:564001,5:1502257,6:738763,7:962531,8:936679,9:955792,10:1309781,11:1176201,12:1417934,13:1279738,14:1485470,15:783558,16:1653310,17:670709


chrom: chr3
strand: -
right_annotated: ENSG00000114450.9:GNB4:protein_coding:7035
samples:
,0:206195,1:33213,2:770274,3:1571990,4:1038504,5:1773099,6:893523,7:1537521,8:1252218,9:1762131,10:2639757,11:2403011,12:2312380,13:1940393,14:2030309,15:1443073,16:2718375,17:1572284


chrom: chr3
strand: +
right_annotated: ENSG00000242539.2:AC007620.3:antisense:1941
samples:
,0:54813,1:7642,2:283282,3:628303,4:358586,5:657505,6:318388,7:592653,8:506233,9:723035,10:708810,11:682730,12:625470,13:559437,14:539140,15:407623,16:731743,17:462398


chrom: chr3
strand: +
right_annotated: ENSG00000272699.1:RP11-145M9.5:antisense:497
samples:
,0:173,2:1515,3:2740,4:2784,5:4714,6:1189,7:5276,8:2094,9:2592,10:11080,11:16336,12:15523,13:11046,14:12581,15:9260,16:15566,17:9194


chrom: chr3
strand: +
right_annotated: ENSG00000136518.16:ACTL6A:protein_coding:3675
samples:
,0:76291,1:64032,2:495176,3:539561,4:329817,5:787188,6:234194,7:354874,8:308321,9:104027,10:893525,11:446029,12:424623,13:446974,14:238531,15:183956,16:271977,17:56140


chrom: chr3
strand: -
right_annotated: ENSG00000272910.1:RP11-15L13.4:antisense:501
samples:
,0:5286,1:4224,2:26974,3:39620,4:19564,5:47617,6:13032,7:28776,8:16645,9:9998,10:60855,11:31719,12:29301,13:32803,14:19335,15:14681,16:19654,17:6080


chrom: chr3
strand: -
right_annotated: ENSG00000272660.1:RP11-145M9.6:antisense:140
samples:
,0:73,2:520,3:691,4:917,5:951,6:274,7:351,8:132,9:945,10:313,11:1755,12:707,13:1272,14:473,15:648,16:637,17:330


chrom: chr3
strand: -
right_annotated: ENSG00000136522.13:MRPL47:protein_coding:1370
samples:
,0:47541,1:20965,2:174396,3:306225,4:163618,5:368196,6:196925,7:249071,8:192085,9:174375,10:437257,11:239752,12:278621,13:279786,14:261859,15:133285,16:221107,17:100797


chrom: chr3
strand: +
right_annotated: ENSG00000136521.12:NDUFB5:protein_coding:5871
samples:
,0:55781,1:30848,2:254305,3:468588,4:264857,5:580509,6:243207,7:468029,8:306272,9:342486,10:512344,11:327390,12:375050,13:314539,14:320776,15:212373,16:357196,17:166115


chrom: chr3
strand: -
right_annotated: ENSG00000239096.1:snoU13:snoRNA:104
samples:
,2:139,3:379,4:347,5:154,6:494,7:419,9:251,10:1382,11:1676,12:228,13:167,14:380,15:343,16:741,17:283


chrom: chr3
strand: -
right_annotated: ENSG00000243977.1:RP11-473P24.2:processed_pseudogene:707
samples:
,1:153,2:1670,3:2395,4:842,5:1186,6:897,7:960,8:1183,9:578,10:1332,11:2888,12:1496,13:1770,14:1069,15:1188,16:1412,17:1158


chrom: chr3
strand: +
right_annotated: ENSG00000058056.8:USP13:protein_coding:8440
samples:
,0:30332,1:10999,2:388504,3:586988,4:397721,5:960971,6:404704,7:718488,8:544711,9:490201,10:543483,11:606267,12:623731,13:716310,14:622459,15:631138,16:641360,17:381801


chrom: chr3
strand: -
right_annotated: ENSG00000114757.18:PEX5L:protein_coding:10236
samples:
,0:204,1:157,2:243123,3:596893,4:733517,5:1440539,6:942752,7:943726,8:656850,9:1811376,10:275459,11:817706,12:1453058,13:1648834,14:2063574,15:1048217,16:1506107,17:1687058


chrom: chr3
strand: +
right_annotated: ENSG00000270178.1:RP11-494H4.3:lincRNA:304
samples:
,2:1459,3:5173,4:4605,5:10894,6:3468,7:5950,8:1953,9:10787,10:3138,11:6566,12:11865,13:8652,14:10728,15:7283,16:5839,17:6568


chrom: chr3
strand: +
right_annotated: ENSG00000243799.1:PEX5L-AS1:antisense:827
samples:
,1:4,2:3224,3:7735,4:14961,5:29424,6:18066,7:15288,8:12715,9:26793,10:11887,11:38802,12:59276,13:80129,14:74117,15:52212,16:57976,17:57216


chrom: chr3
strand: +
right_annotated: ENSG00000244302.1:PEX5L-AS2:antisense:630
samples:
,2:543,3:971,4:1248,5:2229,6:1912,7:1879,8:1095,9:2510,10:3205,11:18352,12:14975,13:16548,14:15626,15:10990,16:13401,17:17790


chrom: chr3
strand: +
right_annotated: ENSG00000239880.1:RP11-420J11.1:processed_pseudogene:1953
samples:
,0:2005,1:814,2:3316,3:2414,4:2899,5:2569,6:2398,7:3519,8:2795,9:2020,10:3969,11:2114,12:3033,13:1611,14:2234,15:1535,16:4566,17:797


chrom: chr3
strand: -
right_annotated: ENSG00000239774.1:RP11-496B10.3:lincRNA:563
samples:
,0:5,1:29,2:85,3:89,4:68,5:247,8:298,9:299,10:1412,11:563,12:714,13:1154,14:540,15:425,16:1468,17:114


chrom: chr3
strand: +
right_annotated: ENSG00000163728.10:TTC14:protein_coding:7783
samples:
,0:43142,1:17685,2:1042334,3:1429268,4:1675839,5:1780835,6:1261810,7:1463685,8:1572948,9:1377488,10:2130943,11:1777964,12:2130749,13:1866947,14:1839573,15:1196073,16:1840647,17:833665


chrom: chr3
strand: -
right_annotated: ENSG00000145075.11:CCDC39:protein_coding:7695
samples:
,0:5298,1:2268,2:153616,3:223946,4:243703,5:257121,6:210503,7:251010,8:235357,9:199013,10:401825,11:369220,12:351553,13:382487,14:304496,15:252746,16:318433,17:185596


chrom: chr3
strand: +
right_annotated: ENSG00000114416.17:FXR1:protein_coding:12054
samples:
,0:198579,1:74945,2:1230824,3:1926993,4:1450807,5:2854208,6:1248466,7:2370702,8:1769465,9:1423283,10:2793005,11:2500977,12:3040281,13:2593249,14:2555438,15:2002214,16:2849943,17:1190025


chrom: chr3
strand: -
right_annotated: ENSG00000205981.6:DNAJC19:protein_coding:3586
samples:
,0:16427,1:8293,2:145121,3:213209,4:168639,5:286777,6:185190,7:210756,8:251327,9:207668,10:346237,11:267981,12:252745,13:201412,14:242205,15:136228,16:310448,17:121910


chrom: chr3
strand: +
right_annotated: ENSG00000242808.7:SOX2-OT:sense_overlapping:11874
samples:
,1:143,2:224743,3:280219,4:274863,5:785170,6:626143,7:669814,8:1154735,9:401442,10:684767,11:379090,12:555395,13:744507,14:1277763,15:695226,16:1613689,17:341435


chrom: chr3
strand: +
right_annotated: ENSG00000242140.1:RP11-262M14.2:processed_pseudogene:231
samples:
,0:1013,1:712,2:99,3:400,4:197,5:230,6:200,7:504,8:297,9:254,10:1039,11:213,12:438,13:231,14:1221,15:551,16:920,17:202


chrom: chr3
strand: +
right_annotated: ENSG00000206932.1:RNU6-4P:snRNA:107
samples:
,0:43263,1:34296,2:5785,3:7093,4:8005,5:11752,6:7350,7:6790,8:6571,9:12780,10:40857,11:25423,12:52040,13:28806,14:62761,15:23701,16:68266,17:17980


chrom: chr3
strand: -
right_annotated: ENSG00000237806.1:FAUP2:processed_pseudogene:401
samples:
,1:50,2:148,3:287,7:218,8:11,9:163,10:5889,11:6612,12:9094,13:10519,14:16044,15:13557,16:25506,17:6831


chrom: chr3
strand: -
right_annotated: ENSG00000241231.1:RP11-275H4.1:lincRNA:865
samples:
,2:469,3:344,4:385,5:1238,6:458,7:1200,8:1264,9:1020,10:7083,11:12951,12:10990,13:12745,14:28969,15:16186,16:28395,17:10437


chrom: chr3
strand: -
right_annotated: ENSG00000239381.6:RP11-4B14.3:lincRNA:1651
samples:
,2:622,3:379,4:816,5:2032,6:1147,7:2167,8:2842,9:827,10:16522,11:14956,12:11140,13:10584,14:22248,15:15578,16:28680,17:7038


chrom: chr3
strand: +
right_annotated: ENSG00000276074.1:SOX2OT_exon1:misc_RNA:232
samples:
,2:6762,3:8664,4:2105,5:8062,6:1754,7:5592,8:4500,9:1324,10:25577,11:8844,12:3891,13:4375,14:6127,15:4381,16:10413,17:1203


chrom: chr3
strand: +
right_annotated: ENSG00000276690.1:SOX2OT_exon3:misc_RNA:276
samples:
,2:30837,3:37464,4:37768,5:174910,6:113313,7:128359,8:264629,9:81690,10:67460,11:33332,12:82343,13:113800,14:196001,15:89152,16:307793,17:56591


chrom: chr3
strand: +
right_annotated: ENSG00000181449.3:SOX2:protein_coding:2513
samples:
,1:6185,2:3562414,3:1239584,4:1820903,5:1882259,6:1238966,7:950627,8:1602563,9:304952,10:3377006,11:978500,12:1269064,13:1213260,14:896491,15:657762,16:1219635,17:194924


chrom: chr3
strand: +
right_annotated: ENSG00000278026.1:SOX2OT_exon4:misc_RNA:109
samples:
,1:42,2:3445,3:7976,4:6830,5:17999,6:13956,7:12030,8:27248,9:6435,10:20343,11:9144,12:13029,13:18643,14:22230,15:14799,16:35341,17:5102


chrom: chr3
strand: +
right_annotated: ENSG00000242512.8:LINC01206:lincRNA:14145
samples:
,2:2731,3:1008,4:3199,5:4527,6:2366,7:6929,8:9122,9:1780,10:3371,11:1972,12:4420,13:5923,14:3808,15:6574,16:12652,17:861


chrom: chr3
strand: -
right_annotated: ENSG00000244199.1:EIF4EP3:processed_pseudogene:656
samples:
,2:152,3:537,4:100,5:531,6:291,7:101,8:496,9:288,10:618,11:330,12:1393,13:336,14:282,15:852,16:708,17:738


chrom: chr3
strand: +
right_annotated: ENSG00000228766.3:RPL7L1P8:processed_pseudogene:741
samples:
,0:1983,1:1151,2:27005,3:62058,4:34793,5:105608,6:34276,7:50796,8:33742,9:54897,10:61908,11:30466,12:62722,13:51629,14:48977,15:23570,16:57297,17:17769


chrom: chr3
strand: -
right_annotated: ENSG00000240063.1:RP11-225N10.1:antisense:1877
samples:
,0:194,2:77,3:404,4:369,5:83,6:63,7:195,9:328,10:200,11:777,12:785,13:400,14:582,15:429,16:1636,17:334


chrom: chr3
strand: +
right_annotated: ENSG00000058063.15:ATP11B:protein_coding:9196
samples:
,0:104288,1:21532,2:462213,3:697587,4:546036,5:1055102,6:502233,7:709839,8:537128,9:465141,10:1460060,11:1504384,12:1522296,13:1286356,14:1372538,15:917298,16:1269907,17:564274


chrom: chr3
strand: -
right_annotated: ENSG00000270554.1:RP11-225N10.3:processed_pseudogene:1099
samples:
,0:204,1:40,2:125,4:63,5:368,6:223,7:84,8:167,10:12253,11:18487,12:11501,13:11949,14:12781,15:11877,16:12926,17:7096


chrom: chr3
strand: -
right_annotated: ENSG00000273261.1:RP11-531F16.4:antisense:699
samples:
,0:1170,1:102,2:5875,3:13028,4:5505,5:12380,6:4534,7:11066,8:6681,9:5422,10:31756,11:46326,12:16476,13:26426,14:13125,15:19594,16:13788,17:10784


chrom: chr3
strand: -
right_annotated: ENSG00000043093.13:DCUN1D1:protein_coding:8412
samples:
,0:59786,1:28071,2:261300,3:544314,4:318884,5:729506,6:326014,7:639859,8:385454,9:571015,10:1196274,11:1116071,12:969445,13:1096214,14:1135136,15:740747,16:1078801,17:662866


chrom: chr3
strand: -
right_annotated: ENSG00000244346.1:RP11-531F16.3:processed_pseudogene:543
samples:
,0:51,2:142,3:1504,4:180,5:682,6:842,7:1071,8:617,9:773,10:7069,11:10427,12:9050,13:8298,14:9086,15:9008,16:10688,17:7738


chrom: chr3
strand: -
right_annotated: ENSG00000078070.12:MCCC1:protein_coding:4321
samples:
,0:36064,1:13160,2:344879,3:426767,4:281471,5:528876,6:398946,7:354246,8:483537,9:342383,10:689940,11:418941,12:551014,13:412349,14:560479,15:247255,16:576117,17:237760


chrom: chr3
strand: +
right_annotated: ENSG00000243368.2:MCCC1-AS1:antisense:765
samples:
,0:1041,1:307,2:13934,3:38803,4:19185,5:36924,6:21325,7:37118,8:25375,9:28030,10:37057,11:30542,12:40088,13:27373,14:34239,15:28556,16:33609,17:16284


chrom: chr3
strand: -
right_annotated: ENSG00000078081.7:LAMP3:protein_coding:3816
samples:
,3:606,4:200,5:1915,6:853,7:1212,8:1458,9:1433,10:901,11:920,12:697,13:1359,14:1398,15:3110,16:2135,17:3472


chrom: chr3
strand: -
right_annotated: ENSG00000053524.11:MCF2L2:protein_coding:20568
samples:
,0:148,1:1378,2:75352,3:136536,4:129735,5:218589,6:295122,7:339168,8:380844,9:517495,10:233343,11:201837,12:265297,13:254606,14:681748,15:448593,16:827488,17:639476


chrom: chr3
strand: +
right_annotated: ENSG00000176597.11:B3GNT5:protein_coding:8140
samples:
,0:102,1:3410,2:195201,3:349314,4:263592,5:546254,6:273529,7:542165,8:322062,9:157485,10:548282,11:481976,12:562000,13:540866,14:581746,15:474794,16:563787,17:207597


chrom: chr3
strand: -
right_annotated: ENSG00000202502.1:RNA5SP151:rRNA:117
samples:
,3:122,4:160,5:440,6:198,7:795,8:325,9:79,10:195,11:466,12:531,13:629,14:1919,15:1818,16:1402,17:1347


chrom: chr3
strand: +
right_annotated: ENSG00000240024.5:LINC00888:transcribed_unprocessed_pseudogene:2131
samples:
,0:8098,1:5239,2:115501,3:159647,4:119602,5:179642,6:152184,7:141976,8:142011,9:130089,10:172454,11:104393,12:134394,13:94170,14:123118,15:64390,16:128700,17:59489


chrom: chr3
strand: +
right_annotated: ENSG00000201229.1:SNORA63:snoRNA:132
samples:
,0:2711,1:1987,2:992,3:2294,4:1636,5:1837,6:1918,7:2079,8:1066,9:805,10:18731,11:20105,12:10395,13:18211,14:9306,15:7405,16:14010,17:7539


chrom: chr3
strand: +
right_annotated: ENSG00000253092.1:SNORA81:snoRNA:198
samples:
,0:51,1:47,2:3349,3:4778,4:5572,5:4705,6:3750,7:4083,8:3664,9:3353,10:4194,11:4859,12:6700,13:3787,14:3485,15:2354,16:4674,17:2178


chrom: chr3
strand: +
right_annotated: ENSG00000199363.1:SNORA63:snoRNA:131
samples:
,0:1062,1:686,2:3629,3:5599,4:2920,5:4726,6:3080,7:3992,8:3970,9:4182,10:9216,11:5969,12:4996,13:8942,14:5261,15:2847,16:4118,17:4159


chrom: chr3
strand: +
right_annotated: ENSG00000251730.1:SNORA4:snoRNA:135
samples:
,2:981,3:2026,4:1704,5:2166,6:1443,7:1955,8:1747,9:1306,10:1716,11:1836,12:2672,13:1605,14:2197,15:855,16:2529,17:1207


chrom: chr3
strand: -
right_annotated: ENSG00000172578.11:KLHL6:protein_coding:10546
samples:
,2:6089,3:9424,4:6549,5:23784,6:9678,7:18156,8:21395,9:13012,10:12709,11:8152,12:11455,13:15583,14:9581,15:10158,16:16456,17:9779


chrom: chr3
strand: +
right_annotated: ENSG00000114796.15:KLHL24:protein_coding:8650
samples:
,0:30484,1:7812,2:687941,3:1467224,4:923685,5:1787209,6:803490,7:1256921,8:765284,9:609463,10:3542193,11:3162401,12:2819520,13:2771526,14:2329018,15:1687698,16:2361553,17:808103


chrom: chr3
strand: +
right_annotated: ENSG00000163872.15:YEATS2:protein_coding:10212
samples:
,0:73493,1:18042,2:2305298,3:2862474,4:2280681,5:4086557,6:2455196,7:3006808,8:2949965,9:1824991,10:3242987,11:2583033,12:3374072,13:2613600,14:3025147,15:2312470,16:3050656,17:1317930


chrom: chr3
strand: -
right_annotated: ENSG00000233885.7:YEATS2-AS1:antisense:3271
samples:
,0:10076,1:2627,2:315532,3:477295,4:305811,5:584019,6:366418,7:481011,8:427736,9:250865,10:414628,11:335525,12:413421,13:345040,14:373175,15:319247,16:386359,17:176173


chrom: chr3
strand: -
right_annotated: ENSG00000180834.7:MAP6D1:protein_coding:2408
samples:
,0:7840,1:1824,2:100452,3:106943,4:171641,5:310626,6:235935,7:156600,8:131284,9:152614,10:111316,11:91266,12:157589,13:150080,14:149297,15:74224,16:104709,17:74979


chrom: chr3
strand: -
right_annotated: ENSG00000175193.12:PARL:protein_coding:2034
samples:
,0:33491,1:28757,2:249020,3:277030,4:172149,5:339203,6:246929,7:254003,8:263836,9:157080,10:351383,11:210765,12:244941,13:225848,14:260619,15:122254,16:258755,17:116076


chrom: chr3
strand: +
right_annotated: ENSG00000234371.6:RPSAP31:transcribed_processed_pseudogene:1179
samples:
,0:50,1:204,2:348,3:356,4:212,5:1189,6:389,7:373,8:690,9:1365,10:1829,11:282,12:1293,13:613,14:1144,15:430,16:734,17:334


chrom: chr3
strand: -
right_annotated: ENSG00000114770.16:ABCC5:protein_coding:11441
samples:
,0:22773,1:11397,2:1786380,3:2449410,4:1670531,5:3081171,6:2044647,7:3422522,8:2886247,9:2127521,10:2033406,11:1833558,12:1853760,13:1587580,14:1798109,15:1602002,16:2007191,17:951770


chrom: chr3
strand: -
right_annotated: ENSG00000223529.1:EEF1A1P8:processed_pseudogene:1388
samples:
,0:5659,1:2491,2:5704,3:15824,4:6505,5:14686,6:10294,7:9203,8:9860,9:6509,10:36561,11:19481,12:19537,13:21297,14:12258,15:4565,16:17040,17:7599


chrom: chr3
strand: +
right_annotated: ENSG00000205955.4:HSP90AA5P:transcribed_processed_pseudogene:2192
samples:
,0:1342,1:1003,2:1709,3:1477,4:2657,5:2906,6:1309,7:1560,8:1388,9:1483,10:1487,11:2412,12:3634,13:2948,14:1890,15:2354,16:2948,17:770


chrom: chr3
strand: -
right_annotated: ENSG00000273181.1:RP11-778D9.13:lincRNA:620
samples:
,0:148,2:400,3:1071,4:500,5:683,6:200,7:829,8:310,9:237,10:1623,11:2117,12:1219,13:1147,14:1291,15:1856,16:1750,17:529


chrom: chr3
strand: -
right_annotated: ENSG00000272721.5:RP11-778D9.12:antisense:386
samples:
,0:152,1:124,2:1450,3:1339,4:901,5:2204,6:996,7:1948,8:2383,9:839,10:1322,11:1075,12:2151,13:1165,14:718,15:1725,16:971,17:882


chrom: chr3
strand: +
right_annotated: ENSG00000145191.12:EIF2B5:protein_coding:5702
samples:
,0:59137,1:35877,2:752626,3:1005328,4:630415,5:1175887,6:797109,7:1102412,8:1003633,9:717304,10:1061905,11:620304,12:768333,13:699353,14:653749,15:546763,16:788721,17:338036


chrom: chr3
strand: +
right_annotated: ENSG00000228205.1:RP11-778D9.4:processed_pseudogene:732
samples:
,0:106177,1:84376,2:5257,3:4722,4:4744,5:6453,6:6769,7:5171,8:8767,9:3461,10:11285,11:6568,12:7949,13:7900,14:6757,15:5139,16:13347,17:4886


chrom: chr3
strand: +
right_annotated: ENSG00000161202.17:DVL3:protein_coding:6090
samples:
,0:51801,1:13858,2:3561096,3:1965046,4:2113867,5:3004992,6:2545869,7:2060140,8:2884443,9:1350888,10:1154662,11:748640,12:845239,13:862344,14:801295,15:886185,16:982501,17:575464


chrom: chr3
strand: +
right_annotated: ENSG00000161203.13:AP2M1:protein_coding:4756
samples:
,0:925680,1:160022,2:4909554,3:4053068,4:3545330,5:5937747,6:6431744,7:4833405,8:6601371,9:4628744,10:4194221,11:2171017,12:3232797,13:2616345,14:3403749,15:1586420,16:3920260,17:1869163


chrom: chr3
strand: +
right_annotated: ENSG00000161204.11:ABCF3:protein_coding:5207
samples:
,0:60794,1:22615,2:543294,3:627962,4:366790,5:756382,6:562722,7:665191,8:657128,9:463587,10:605736,11:386446,12:454615,13:451984,14:464652,15:298814,16:507426,17:246940


chrom: chr3
strand: +
right_annotated: ENSG00000145198.14:VWA5B2:protein_coding:5730
samples:
,0:383,1:599,2:21752,3:12484,4:15924,5:15820,6:39513,7:24351,8:48537,9:42201,10:22406,11:12263,12:15188,13:21598,14:17736,15:13770,16:27092,17:27382


chrom: chr3
strand: -
right_annotated: ENSG00000214160.9:ALG3:protein_coding:3464
samples:
,0:12886,1:11397,2:201096,3:113422,4:99504,5:162797,6:124674,7:114825,8:164548,9:100311,10:118980,11:75984,12:64942,13:84480,14:52563,15:58352,16:81420,17:48335


chrom: chr3
strand: +
right_annotated: ENSG00000145194.17:ECE2:protein_coding:6552
samples:
,0:5720,1:9735,2:44169,3:44452,4:43143,5:195496,6:343399,7:223925,8:339747,9:303764,10:27830,11:23771,12:35115,13:102722,14:186984,15:89715,16:177346,17:137768


chrom: chr3
strand: -
right_annotated: ENSG00000163888.3:CAMK2N2:protein_coding:1362
samples:
,0:452,1:490,2:53713,3:30174,4:85766,5:120674,6:557194,7:163877,8:361870,9:351929,10:8255,11:11243,12:22089,13:36746,14:187258,15:60787,16:128823,17:168764


chrom: chr3
strand: +
right_annotated: ENSG00000175166.16:PSMD2:protein_coding:5453
samples:
,0:677882,1:194120,2:2609104,3:2666422,4:1905024,5:3418512,6:2592742,7:2392955,8:2544213,9:1894911,10:2942880,11:1748531,12:2360717,13:1894955,14:2000298,15:1043956,16:1996391,17:1020526


chrom: chr3
strand: +
right_annotated: ENSG00000114867.20:EIF4G1:protein_coding:8257
samples:
,0:341890,1:180465,2:3779890,3:2702637,4:2549778,5:4143842,6:3925902,7:3003307,8:3750212,9:2758630,10:2829139,11:1684580,12:2476841,13:1645127,14:2825328,15:1743536,16:2566990,17:1648963


chrom: chr3
strand: +
right_annotated: ENSG00000175182.13:FAM131A:protein_coding:6597
samples:
,0:16492,1:4179,2:873356,3:544708,4:557480,5:634937,6:850967,7:587909,8:1074216,9:895788,10:793014,11:399141,12:432211,13:437178,14:407722,15:320504,16:712039,17:559148


chrom: chr3
strand: -
right_annotated: ENSG00000114859.15:CLCN2:protein_coding:8523
samples:
,0:3476,1:3647,2:238472,3:232172,4:158558,5:229035,6:241837,7:313200,8:245193,9:172511,10:296575,11:173956,12:173554,13:163319,14:161970,15:209563,16:195371,17:135386


chrom: chr3
strand: +
right_annotated: ENSG00000163882.9:POLR2H:protein_coding:3146
samples:
,0:41418,1:28687,2:268066,3:360942,4:238410,5:441624,6:277949,7:353651,8:350514,9:197412,10:372047,11:188518,12:271742,13:249462,14:199666,15:130756,16:254300,17:107574


chrom: chr3
strand: -
right_annotated: ENSG00000090534.17:THPO:protein_coding:1915
samples:
,0:204,2:3404,3:1621,4:2597,5:7803,6:5319,7:14017,8:22815,9:2913,10:5167,11:2923,12:4396,13:5688,14:5926,15:10772,16:12312,17:2204


chrom: chr3
strand: +
right_annotated: ENSG00000090539.15:CHRD:protein_coding:6620
samples:
,0:1306,1:102,2:76637,3:39858,4:31254,5:99892,6:156537,7:255365,8:321358,9:58655,10:29570,11:18774,12:16211,13:61804,14:53848,15:100595,16:142697,17:43678


chrom: chr3
strand: +
right_annotated: ENSG00000224153.2:RP11-433C9.2:lincRNA:1158
samples:
,2:258,3:875,4:599,5:2220,6:698,7:6272,8:5643,9:968,10:600,11:202,13:1500,14:929,15:2017,16:3528,17:1462


chrom: chr3
strand: +
right_annotated: ENSG00000182580.2:EPHB3:protein_coding:4532
samples:
,0:3165,1:1354,2:143682,3:62837,4:102579,5:111540,6:109122,7:82909,8:136390,9:88305,10:73030,11:27694,12:63319,13:30231,14:42078,15:37398,16:63490,17:46059


chrom: chr3
strand: -
right_annotated: ENSG00000177383.4:MAGEF1:protein_coding:1636
samples:
,0:28690,1:14073,2:667042,3:531769,4:608797,5:851817,6:899753,7:645873,8:900521,9:505735,10:640380,11:375493,12:654264,13:601831,14:725472,15:323167,16:750408,17:308646


chrom: chr3
strand: +
right_annotated: ENSG00000272970.1:RP11-329B9.4:lincRNA:701
samples:
,0:48,2:2746,3:5282,4:2445,5:8811,6:5457,7:8913,8:5373,9:5371,10:5034,11:3662,12:3804,13:5450,14:7714,15:6597,16:5180,17:5428


chrom: chr3
strand: +
right_annotated: ENSG00000273403.1:RP11-329B9.3:lincRNA:526
samples:
,2:2464,3:6471,4:2317,5:6061,6:2845,7:8506,8:4185,9:8328,10:913,11:2041,12:1538,13:2168,14:2561,15:3739,16:3638,17:3238


chrom: chr3
strand: +
right_annotated: ENSG00000272922.1:RP11-329B9.5:lincRNA:467
samples:
,2:627,3:874,4:100,5:1080,6:1996,7:2741,8:919,9:1305,10:400,12:598,13:1101,14:1248,15:852,16:127,17:990


chrom: chr3
strand: +
right_annotated: ENSG00000156931.15:VPS8:protein_coding:10366
samples:
,0:50452,1:20952,2:842734,3:1359243,4:814605,5:1846984,6:1173750,7:1755472,8:1137464,9:1251126,10:2073642,11:1588293,12:1712853,13:1469366,14:1885864,15:1234097,16:1559506,17:862188


chrom: chr3
strand: -
right_annotated: ENSG00000187068.2:C3orf70:protein_coding:5901
samples:
,0:5053,1:102,2:567099,3:838157,4:505280,5:989492,6:652981,7:690667,8:646440,9:509552,10:1170277,11:1001192,12:927749,13:830814,14:1033888,15:641341,16:892764,17:532607


chrom: chr3
strand: +
right_annotated: ENSG00000223358.5:EHHADH-AS1:antisense:1632
samples:
,0:1389,1:404,2:1354,3:2996,4:1144,5:1776,6:1567,7:3434,8:2815,9:2721,10:2972,11:3525,12:3409,13:3808,14:5365,15:1838,16:2925,17:1600


chrom: chr3
strand: -
right_annotated: ENSG00000113790.10:EHHADH:protein_coding:4700
samples:
,0:15654,1:5427,2:27737,3:39575,4:23585,5:48199,6:32272,7:36732,8:41972,9:30084,10:47348,11:40516,12:42143,13:44096,14:47146,15:28570,16:43447,17:18850


chrom: chr3
strand: -
right_annotated: ENSG00000229704.1:EIF2S2P2:processed_pseudogene:982
samples:
,0:2539,1:1300,2:2318,3:4213,4:2574,5:3911,6:3980,7:2792,8:5472,9:2602,10:5823,11:2108,12:5655,13:2225,14:5070,15:2083,16:6303,17:1104


chrom: chr3
strand: +
right_annotated: ENSG00000073803.13:MAP3K13:protein_coding:12623
samples:
,0:14293,1:8448,2:448021,3:701447,4:624717,5:1144680,6:731403,7:830286,8:718130,9:1128115,10:782980,11:818159,12:1114533,13:981368,14:1311244,15:837970,16:1104174,17:1051620


chrom: chr3
strand: -
right_annotated: ENSG00000229638.1:RPL4P4:processed_pseudogene:1284
samples:
,0:615968,1:572559,2:2317273,3:2368074,4:1855539,5:2812520,6:2237199,7:2372536,8:2447724,9:1289583,10:2907656,11:1242497,12:2175414,13:1722835,14:1938681,15:766610,16:2156767,17:512985


chrom: chr3
strand: -
right_annotated: ENSG00000163900.10:TMEM41A:protein_coding:8668
samples:
,0:19031,1:12002,2:149380,3:221035,4:165451,5:326199,6:210528,7:242082,8:241107,9:256598,10:306970,11:249288,12:304129,13:288680,14:353532,15:211104,16:324133,17:208762


chrom: chr3
strand: -
right_annotated: ENSG00000163898.9:LIPH:protein_coding:4122
samples:
,0:1220,1:12457,2:373,3:656,4:942,5:938,6:1013,7:1414,8:1153,9:1910,10:2715,11:1841,12:2836,13:3109,14:6735,15:6364,16:10001,17:5235


chrom: chr3
strand: +
right_annotated: ENSG00000163904.12:SENP2:protein_coding:7169
samples:
,0:55718,1:19884,2:529783,3:754888,4:444305,5:935468,6:410299,7:637104,8:497757,9:470350,10:722680,11:584495,12:635240,13:533890,14:606382,15:466777,16:572005,17:291612


chrom: chr3
strand: +
right_annotated: ENSG00000236489.1:RP11-537I16.2:processed_pseudogene:299
samples:
,0:129,2:1060,3:1817,4:403,5:1125,6:877,7:650,8:462,9:1280,10:5145,11:5121,12:4375,13:4137,14:8764,15:4560,16:4978,17:2769


chrom: chr3
strand: -
right_annotated: ENSG00000073792.15:IGF2BP2:protein_coding:4735
samples:
,0:31591,1:2940,2:2057686,3:1323920,4:1135607,5:1704654,6:725442,7:848422,8:712250,9:353598,10:1443463,11:908800,12:943565,13:1046508,14:615567,15:632400,16:553093,17:223028


chrom: chr3
strand: +
right_annotated: ENSG00000163915.7:IGF2BP2-AS1:antisense:3415
samples:
,0:255,2:738,3:733,5:594,6:3617,7:1318,8:476,9:1456,10:48059,11:77578,12:23323,13:23219,14:22961,15:41537,16:16569,17:9834


chrom: chr3
strand: -
right_annotated: ENSG00000136527.17:TRA2B:protein_coding:11769
samples:
,0:202237,1:156723,2:2355777,3:3095366,4:2173306,5:4148451,6:2065299,7:2741001,8:2527342,9:1745446,10:5049903,11:3412682,12:3519123,13:3245935,14:2774987,15:2125082,16:2854395,17:1128139


chrom: chr3
strand: -
right_annotated: ENSG00000244405.7:ETV5:protein_coding:5802
samples:
,0:40022,1:16363,2:838658,3:807639,4:626489,5:1417833,6:452607,7:601863,8:659708,9:1342464,10:1112947,11:638409,12:872010,13:843614,14:554116,15:384720,16:675075,17:884638


chrom: chr3
strand: +
right_annotated: ENSG00000234197.1:ETV5-AS1:antisense:560
samples:
,0:306,1:51,2:1170,3:1582,4:536,5:3241,6:165,7:1956,8:1140,9:2365,10:13195,11:14848,12:12706,13:10406,14:8523,15:7266,16:8683,17:10203


chrom: chr3
strand: -
right_annotated: ENSG00000058866.14:DGKG:protein_coding:10978
samples:
,0:3250,1:13939,2:43515,3:48405,4:38147,5:67491,6:42350,7:41040,8:61684,9:136597,10:75033,11:60203,12:69876,13:74600,14:79032,15:46771,16:91380,17:157235


chrom: chr3
strand: -
right_annotated: ENSG00000213139.7:CRYGS:protein_coding:2151
samples:
,0:1695,1:1170,2:40103,3:94676,4:47157,5:97138,6:68879,7:101693,8:64841,9:103060,10:85999,11:72696,12:67316,13:72635,14:74551,15:56687,16:80437,17:65404


chrom: chr3
strand: -
right_annotated: ENSG00000113838.12:TBCCD1:protein_coding:3405
samples:
,0:13242,1:8614,2:167556,3:245897,4:195715,5:439032,6:275608,7:286710,8:292606,9:401795,10:418021,11:272457,12:372525,13:313547,14:400595,15:211242,16:352915,17:275247


chrom: chr3
strand: +
right_annotated: ENSG00000090520.11:DNAJB11:protein_coding:5731
samples:
,0:118803,1:40367,2:508188,3:608975,4:480653,5:700158,6:478001,7:492493,8:484255,9:450541,10:691039,11:398553,12:545459,13:403991,14:434300,15:267826,16:429885,17:210574


chrom: chr3
strand: -
right_annotated: ENSG00000197099.8:RP11-573D15.8:antisense:11099
samples:
,0:560,1:527,2:8114,3:16778,4:11655,5:14920,6:8944,7:14717,8:10496,9:12582,10:20891,11:16423,12:12835,13:12587,14:9846,15:12835,16:12364,17:7100


chrom: chr3
strand: +
right_annotated: ENSG00000283149.1:RP11-134F2.8:protein_coding:501
samples:
,0:39634,1:13013,2:184211,3:241768,4:168106,5:293178,6:191581,7:198472,8:193226,9:189836,10:239266,11:112968,12:202383,13:119026,14:175723,15:84449,16:169933,17:71632


chrom: chr3
strand: +
right_annotated: ENSG00000283390.1:RP11-134F2.7:processed_pseudogene:225
samples:
,0:10924,1:7147,2:18331,3:40346,4:14337,5:46642,6:24139,7:34873,8:33278,9:17885,10:40271,11:19024,12:30859,13:28043,14:30654,15:16576,16:30640,17:9933


chrom: chr3
strand: +
right_annotated: ENSG00000145192.12:AHSG:protein_coding:2353
samples:
,1:102,2:1747,3:1374,4:1283,5:5371,6:5431,7:2692,8:7060,9:1894,10:3635,11:2915,12:2486,13:3522,14:4313,15:2386,16:4331,17:3316


chrom: chr3
strand: +
right_annotated: ENSG00000226652.3:PSMD10P2:transcribed_processed_pseudogene:1087
samples:
,0:1078,1:831,2:329,3:404,4:490,5:41,6:197,7:137,8:200,9:468,10:401,11:397,12:230,13:101,14:1447,15:108,16:500,17:571


chrom: chr3
strand: +
right_annotated: ENSG00000230951.1:GPS2P2:processed_pseudogene:888
samples:
,0:102,2:2434,3:2765,4:5573,5:1450,6:6580,7:403,8:2634,9:13818,10:9039,11:7111,12:8762,13:2357,14:9006,15:1007,16:3250,17:11270


chrom: chr3
strand: -
right_annotated: ENSG00000263826.1:RP11-573D15.9:antisense:2400
samples:
,0:20407,1:8674,2:122658,3:181661,4:116727,5:280898,6:129081,7:177695,8:127734,9:247001,10:204214,11:121513,12:124301,13:157197,14:124601,15:83852,16:178099,17:75915


chrom: chr3
strand: +
right_annotated: ENSG00000156976.15:EIF4A2:protein_coding:6133
samples:
,0:705753,1:319142,2:7058203,3:11188881,4:7144336,5:15450353,6:8663739,7:11894771,8:10988254,9:10993862,10:12738806,11:8283514,12:11346294,13:9608969,14:10462394,15:5068810,16:11310432,17:4895727


chrom: chr3
strand: +
right_annotated: ENSG00000238942.1:SNORD2:snoRNA:69
samples:
,0:2610,1:1877,2:8894,3:9829,4:10432,5:12507,6:10989,7:10759,8:17273,9:10161,10:32573,11:19432,12:27893,13:19035,14:23510,15:18456,16:23457,17:10084


chrom: chr3
strand: +
right_annotated: ENSG00000200418.1:SNORA63:snoRNA:123
samples:
,0:5914,1:9397,2:10910,3:14658,4:11138,5:27890,6:10703,7:20216,8:16621,9:16018,10:28885,11:21772,12:15977,13:17155,14:15822,15:8577,16:18691,17:10021


chrom: chr3
strand: +
right_annotated: ENSG00000221420.2:SNORA81:snoRNA:178
samples:
,0:40008,1:21969,2:9644,3:17894,4:13931,5:29291,6:12715,7:23109,8:14409,9:16219,10:70541,11:86541,12:45580,13:39375,14:40462,15:29929,16:45616,17:16259


chrom: chr3
strand: +
right_annotated: ENSG00000200320.1:SNORA63:snoRNA:132
samples:
,0:197657,1:140347,2:13761,3:22435,4:12833,5:24077,6:14727,7:25240,8:17120,9:13048,10:960554,11:586546,12:476863,13:630815,14:467910,15:324533,16:648139,17:287995


chrom: chr3
strand: +
right_annotated: ENSG00000263776.1:SNORA4:snoRNA:138
samples:
,0:28558,1:15627,2:29821,3:34002,4:28870,5:46027,6:24474,7:42345,8:35878,9:37986,10:49631,11:34219,12:47533,13:36934,14:39078,15:22038,16:43860,17:13447


chrom: chr3
strand: -
right_annotated: ENSG00000163918.10:RFC4:protein_coding:2997
samples:
,0:25805,1:29778,2:333120,3:440822,4:240261,5:505367,6:217145,7:350438,8:280991,9:190317,10:690393,11:283076,12:382691,13:266649,14:260994,15:164874,16:300277,17:80443


chrom: chr3
strand: -
right_annotated: ENSG00000232233.1:RP11-573D15.2:lincRNA:1832
samples:
,0:229,1:434,2:1572,3:1756,4:1569,5:1124,6:2961,7:1724,8:3511,9:2680,10:4224,11:5129,12:3752,13:2870,14:3364,15:2405,16:3831,17:3438


chrom: chr3
strand: +
right_annotated: ENSG00000231982.1:RP11-573D15.1:unprocessed_pseudogene:330
samples:
,0:272,1:165,2:5066,3:1006,4:4378,5:1791,6:4362,7:2318,8:5532,9:2683,10:2748,11:3113,12:3257,13:2202,14:2229,15:1602,16:4844,17:4278


chrom: chr3
strand: +
right_annotated: ENSG00000223803.1:RPS20P14:processed_pseudogene:360
samples:
,0:51406,1:45613,2:13713,3:16764,4:8497,5:21879,6:10522,7:14641,8:14374,9:6110,10:76642,11:27325,12:36400,13:23456,14:21950,15:10553,16:40329,17:5351


chrom: chr3
strand: +
right_annotated: ENSG00000073849.14:ST6GAL1:protein_coding:9151
samples:
,0:2117,1:3795,2:863282,3:1044187,4:1015622,5:1952321,6:1701724,7:1533559,8:1632145,9:1476542,10:550010,11:780981,12:997910,13:811888,14:1261208,15:859118,16:1108689,17:799320


chrom: chr3
strand: -
right_annotated: ENSG00000163923.9:RPL39L:protein_coding:1060
samples:
,0:27211,1:22509,2:142256,3:92452,4:94590,5:112585,6:125014,7:65378,8:116704,9:53779,10:158894,11:62515,12:84870,13:86543,14:71178,15:30910,16:78760,17:39352


chrom: chr3
strand: -
right_annotated: ENSG00000198491.3:RP11-208N14.4:antisense:2674
samples:
,2:2042,3:84,4:999,5:1338,6:5164,7:998,8:1898,9:6129,10:311,11:509,12:653,13:1232,14:1999,15:477,16:725,17:5205


chrom: chr3
strand: +
right_annotated: ENSG00000175077.5:RTP1:protein_coding:2217
samples:
,2:4202,3:2014,4:1905,5:6560,6:15736,7:3176,8:5971,9:28451,10:2896,11:808,12:2658,13:4373,14:10991,15:2248,16:3152,17:12167


chrom: chr3
strand: -
right_annotated: ENSG00000127241.16:MASP1:protein_coding:13161
samples:
,0:154015,1:102,2:1314127,3:1232827,4:515079,5:1632438,6:377717,7:457897,8:483865,9:4106644,10:1620162,11:853926,12:532517,13:981897,14:300237,15:216815,16:364024,17:1861080


chrom: chr3
strand: +
right_annotated: ENSG00000283175.1:RP11-208N14.5:antisense:1973
samples:
,0:3844,2:27924,3:52367,4:26903,5:127813,6:29840,7:59485,8:51035,9:188899,10:47385,11:55044,12:33033,13:92488,14:36787,15:29258,16:57500,17:98893


chrom: chr3
strand: -
right_annotated: ENSG00000157005.3:SST:protein_coding:618
samples:
,2:158842,3:61722,4:146988,5:84544,6:146683,7:70990,8:179188,9:400750,10:29384,11:32151,12:67283,13:50803,14:48949,15:39877,16:69316,17:280267


chrom: chr3
strand: +
right_annotated: ENSG00000228804.5:RP11-211G3.3:antisense:717
samples:
,0:1316,1:110,2:11554,3:21193,4:12727,5:172414,6:43988,7:19319,8:17135,9:49218,10:12092,11:12316,12:16350,13:70935,14:37026,15:6905,16:12322,17:21523


chrom: chr3
strand: -
right_annotated: ENSG00000113916.17:BCL6:protein_coding:5938
samples:
,0:18768,1:2623,2:550509,3:356941,4:501622,5:3396182,6:1353449,7:384588,8:589621,9:984072,10:235826,11:175907,12:389253,13:1365109,14:880906,15:191730,16:293808,17:454592


chrom: chr3
strand: +
right_annotated: ENSG00000223401.2:RP11-211G3.2:protein_coding:1144
samples:
,0:400,1:242,2:14320,3:5216,4:11955,5:59617,6:25289,7:4512,8:10758,9:14845,10:11597,11:5792,12:14800,13:42929,14:20331,15:11870,16:14392,17:14727


chrom: chr3
strand: -
right_annotated: ENSG00000270959.1:LPP-AS2:antisense:2852
samples:
,0:5174,1:2048,2:6683,3:5041,4:3826,5:9184,6:6380,7:5011,8:6310,9:5951,10:14184,11:11726,12:10388,13:18726,14:7974,15:8040,16:10597,17:6500


chrom: chr3
strand: +
right_annotated: ENSG00000145012.12:LPP:protein_coding:25535
samples:
,0:72234,1:48974,2:151544,3:253006,4:146607,5:445317,6:154971,7:267544,8:163281,9:252423,10:622943,11:682208,12:452079,13:575492,14:491033,15:487100,16:492361,17:435730


chrom: chr3
strand: +
right_annotated: ENSG00000279891.1:FLJ42393:TEC:2270
samples:
,0:70,1:509,2:600,3:202,7:1181,8:200,9:202,10:12486,11:17441,12:7575,13:12106,14:7908,15:21550,16:9352,17:9458


chrom: chr3
strand: -
right_annotated: ENSG00000234076.1:TPRG1-AS1:lincRNA:697
samples:
,0:38,2:200,3:303,4:181,5:511,6:200,7:240,9:284,10:1709,11:1362,12:657,13:1079,14:1809,15:669,16:941,17:762


chrom: chr3
strand: +
right_annotated: ENSG00000188001.9:TPRG1:protein_coding:9535
samples:
,0:113,1:191,2:515,3:1482,4:1273,5:4961,6:2791,7:2137,8:1839,9:2450,10:7421,11:9886,12:3838,13:11228,14:4588,15:5733,16:10690,17:7601


chrom: chr3
strand: +
right_annotated: ENSG00000073282.12:TP63:protein_coding:7454
samples:
,1:3423,2:642,3:1237,4:400,5:2116,6:1414,7:1414,8:1608,9:2809,10:824,11:945,12:934,13:1943,14:1437,15:1460,16:2825,17:2432


chrom: chr3
strand: -
right_annotated: ENSG00000090530.9:P3H2:protein_coding:5605
samples:
,0:34386,1:19133,2:48543,3:82483,4:85060,5:84566,6:123107,7:49645,8:31902,9:99600,10:43927,11:52460,12:88622,13:44534,14:100715,15:24367,16:34649,17:65022


chrom: chr3
strand: -
right_annotated: ENSG00000230077.1:MTAPP2:processed_pseudogene:832
samples:
,0:1631,1:799,2:384,3:901,4:1244,5:551,6:2159,7:300,8:200,9:1968,10:2171,11:3404,12:4342,13:1493,14:5975,15:2308,16:2502,17:4094


chrom: chr3
strand: +
right_annotated: ENSG00000225764.1:P3H2-AS1:antisense:730
samples:
,0:30,1:131,2:1015,3:742,4:1970,5:760,6:4605,7:513,8:1289,9:4463,10:100,11:933,12:1063,13:374,14:3142,15:594,16:2231,17:4729


chrom: chr3
strand: -
right_annotated: ENSG00000163347.5:CLDN1:protein_coding:3663
samples:
,0:908,1:16494,2:2696,3:40099,4:144380,5:15183,6:210185,7:54903,8:44302,9:469059,10:800,11:24525,12:120827,13:9556,14:149535,15:26519,16:38181,17:256432


chrom: chr3
strand: +
right_annotated: ENSG00000113946.3:CLDN16:protein_coding:3583
samples:
,0:102,2:585,4:1667,5:202,6:3396,7:1652,8:923,9:12447,10:1034,11:303,12:2593,13:577,14:4875,15:1053,16:2742,17:15632


chrom: chr3
strand: +
right_annotated: ENSG00000196083.9:IL1RAP:protein_coding:11558
samples:
,0:9029,1:4304,2:7601,3:34720,4:64545,5:55513,6:184435,7:84292,8:93062,9:341310,10:13295,11:56377,12:139356,13:56528,14:340497,15:78463,16:160271,17:308096


chrom: chr3
strand: +
right_annotated: ENSG00000223117.1:RN7SKP296:misc_RNA:341
samples:
,0:216,1:143,3:286,4:501,5:780,6:563,7:202,8:343,9:820,10:1592,11:1244,12:1627,13:879,14:3154,15:140,16:2130,17:2756


chrom: chr3
strand: +
right_annotated: ENSG00000273370.1:RP11-268E23.2:lincRNA:535
samples:
,2:115,3:428,4:1116,5:831,6:2040,7:2373,8:1493,9:12069,10:30,11:1789,12:3027,13:745,14:10922,15:2251,16:4183,17:9073


chrom: chr3
strand: +
right_annotated: ENSG00000214147.2:RP11-332P22.2:processed_pseudogene:1209
samples:
,0:40,1:51,2:14012,3:16697,4:15875,5:33162,6:11610,7:15839,8:13040,9:12285,10:26262,11:14012,12:28336,13:21611,14:20809,15:15736,16:15198,17:9164


chrom: chr3
strand: -
right_annotated: ENSG00000205835.8:GMNC:protein_coding:3804
samples:
,2:600,3:285,4:865,5:2413,6:1299,7:2586,8:3201,9:10156,10:400,11:1283,12:1100,13:1262,14:3462,15:1896,16:3922,17:6956


chrom: chr3
strand: +
right_annotated: ENSG00000188729.6:OSTN:protein_coding:3219
samples:
,0:377,2:18172,3:20291,4:1299,5:19539,6:7046,7:239925,8:138458,9:96950,10:32361,11:22708,12:3253,13:24036,14:23582,15:215096,16:367439,17:82286


chrom: chr3
strand: -
right_annotated: ENSG00000233308.1:OSTN-AS1:antisense:515
samples:
,0:977,2:1296,3:1918,5:1593,6:262,7:14208,8:9756,9:6581,10:2837,11:1068,12:263,13:2193,14:1072,15:11163,16:18475,17:4688


chrom: chr3
strand: -
right_annotated: ENSG00000188958.9:UTS2B:protein_coding:3850
samples:
,0:12201,1:793,2:51907,3:7849,4:56364,5:14239,6:37000,7:9705,8:22812,9:6645,10:22064,11:27473,12:25383,13:30766,14:26147,15:20608,16:44457,17:26804


chrom: chr3
strand: +
right_annotated: ENSG00000152492.13:CCDC50:protein_coding:9202
samples:
,0:155816,1:27518,2:1855939,3:3296904,4:2328160,5:4118322,6:2490613,7:3482649,8:2211337,9:2299381,10:3203469,11:3844639,12:3974809,13:3208471,14:4277389,15:3031163,16:3507323,17:1918753


chrom: chr3
strand: +
right_annotated: ENSG00000223812.5:RP11-197K6.1:lincRNA:1009
samples:
,2:508,3:403,4:732,5:1112,6:849,7:999,8:200,9:364,10:60,11:404,12:368,13:741,14:362,15:202,16:404,17:202


chrom: chr3
strand: -
right_annotated: ENSG00000114279.13:FGF12:protein_coding:7355
samples:
,1:301,2:340699,3:391155,4:781742,5:855807,6:1336634,7:1156285,8:1079991,9:1819910,10:526333,11:764833,12:1900764,13:1050000,14:3273611,15:1473731,16:2356772,17:2201982


chrom: chr3
strand: +
right_annotated: ENSG00000231383.2:FGF12-AS1:antisense:1080
samples:
,2:128,3:282,4:138,5:198,6:322,7:639,9:111,10:10719,11:18273,12:35528,13:11912,14:39839,15:32465,16:42342,17:37528


chrom: chr3
strand: +
right_annotated: ENSG00000230126.1:FGF12-AS2:antisense:580
samples:
,0:51,2:227,3:202,4:29,5:190,6:3087,7:1597,8:4875,9:2782,10:7313,11:13161,12:19319,13:12261,14:23436,15:16761,16:27699,17:31755


chrom: chr3
strand: +
right_annotated: ENSG00000226709.1:FGF12-AS3:antisense:291
samples:
,2:57,3:326,4:39,5:130,6:1559,7:1312,8:3019,9:1902,10:4509,11:8626,12:12612,13:2984,14:16732,15:11080,16:13019,17:12824


chrom: chr3
strand: -
right_annotated: ENSG00000180611.6:MB21D2:protein_coding:3368
samples:
,0:43844,1:9887,2:220244,3:474899,4:486570,5:824629,6:689150,7:738579,8:427423,9:522118,10:358415,11:489251,12:842457,13:719545,14:946958,15:430693,16:562080,17:376768


chrom: chr3
strand: -
right_annotated: ENSG00000236229.1:VEZF1P1:processed_pseudogene:1541
samples:
,0:1295,1:1173,2:6466,3:7071,4:7523,5:13870,6:6366,7:7615,8:8052,9:3391,10:12687,11:9471,12:8901,13:8613,14:5662,15:2710,16:7074,17:2861


chrom: chr3
strand: +
right_annotated: ENSG00000127252.5:HRASLS:protein_coding:1169
samples:
,1:102,2:23818,3:22645,4:24218,5:49996,6:43007,7:43494,8:43497,9:34243,10:23667,11:27543,12:37228,13:41874,14:51476,15:33644,16:54168,17:34349


chrom: chr3
strand: -
right_annotated: ENSG00000187527.10:ATP13A5:protein_coding:6228
samples:
,2:4169,3:10828,4:4411,5:21646,6:10719,7:18457,8:15529,9:15544,10:10400,11:13512,12:11846,13:15352,14:20826,15:17998,16:24068,17:12258


chrom: chr3
strand: +
right_annotated: ENSG00000236508.1:ATP13A5-AS1:antisense:476
samples:
,2:2568,3:2712,4:2633,5:9073,6:4686,7:9509,8:4377,9:4800,10:3055,11:2666,12:2484,13:4983,14:6048,15:2976,16:5348,17:4319


chrom: chr3
strand: -
right_annotated: ENSG00000127249.14:ATP13A4:protein_coding:6013
samples:
,1:51,2:26654,3:37402,4:29456,5:129106,6:76509,7:111398,8:129537,9:97223,10:39996,11:50610,12:64965,13:98983,14:124453,15:95884,16:199403,17:82022


chrom: chr3
strand: +
right_annotated: ENSG00000225473.1:ATP13A4-AS1:antisense:1046
samples:
,2:1139,3:552,4:1357,5:5908,6:1263,7:4427,8:4941,9:3854,10:2731,11:4432,12:2109,13:6947,14:7174,15:8321,16:16991,17:7611


chrom: chr3
strand: -
right_annotated: ENSG00000236297.1:RP11-175P19.2:transcribed_processed_pseudogene:924
samples:
,0:646,1:80,2:3202,3:5513,4:4584,5:5078,6:4247,7:4582,8:4582,9:1666,10:8719,11:3789,12:14510,13:5280,14:5514,15:4549,16:7499,17:1937


chrom: chr3
strand: +
right_annotated: ENSG00000198836.8:OPA1:protein_coding:8448
samples:
,0:123020,1:82489,2:919244,3:1686814,4:1190697,5:2122594,6:1262294,7:1545455,8:1229239,9:1614791,10:2850567,11:2293338,12:2878708,13:2197237,14:2818704,15:1317642,16:2316298,17:1367290


chrom: chr3
strand: -
right_annotated: ENSG00000224855.5:OPA1-AS1:antisense:497
samples:
,0:1024,1:768,2:7294,3:16817,4:8807,5:26792,6:11015,7:17048,8:10190,9:15984,10:48137,11:50097,12:48084,13:36916,14:41816,15:27347,16:33221,17:18942


chrom: chr3
strand: +
right_annotated: ENSG00000207370.1:Y_RNA:misc_RNA:113
samples:
,0:134,2:93,3:755,4:200,5:730,6:168,7:235,9:139,10:6364,11:10344,12:4865,13:5659,14:3620,15:3203,16:3941,17:2220


chrom: chr3
strand: -
right_annotated: ENSG00000230102.7:RP11-407B7.1:processed_transcript:7346
samples:
,2:1091,3:798,4:500,5:1009,6:1138,7:999,8:350,9:891,10:3293,11:3727,12:1668,13:2168,14:3148,15:1817,16:1985,17:2084


chrom: chr3
strand: -
right_annotated: ENSG00000232874.1:RP11-135A1.2:antisense:430
samples:
,0:18,2:1028,3:664,4:639,5:790,6:1005,7:306,8:817,9:545,10:542,11:319,12:444,13:331,14:994,15:57,16:528,17:616


chrom: chr3
strand: +
right_annotated: ENSG00000114315.3:HES1:protein_coding:2062
samples:
,0:1711,1:6130,2:579297,3:256171,4:290035,5:306960,6:161149,7:147253,8:178574,9:47346,10:882359,11:276406,12:220721,13:233157,14:122299,15:104106,16:135948,17:28458


chrom: chr3
strand: -
right_annotated: ENSG00000225742.5:RP11-513G11.4:lincRNA:970
samples:
,2:5387,3:4314,4:1934,5:4428,6:3024,7:4337,8:2096,9:2397,10:6517,11:4653,12:4337,13:3921,14:4827,15:605,16:2415,17:2774


chrom: chr3
strand: -
right_annotated: ENSG00000178732.5:GP5:protein_coding:3534
samples:
,0:149,2:1700,3:302,4:800,5:1010,6:1706,7:485,8:1502,9:808,10:1941,11:1787,12:645,13:8699,14:1295,15:2826,16:2078,17:868


chrom: chr3
strand: -
right_annotated: ENSG00000133657.14:ATP13A3:protein_coding:11864
samples:
,0:208641,1:69668,2:527172,3:1073356,4:865999,5:1603314,6:896072,7:1165254,8:827396,9:1399954,10:2216874,11:2076243,12:2282976,13:1810100,14:2316259,15:1272635,16:1949183,17:1393527


chrom: chr3
strand: +
right_annotated: ENSG00000233058.1:LINC00884:antisense:2922
samples:
,0:344,1:51,2:63148,3:58782,4:71668,5:114531,6:112249,7:78641,8:101323,9:120973,10:59869,11:42537,12:57948,13:60533,14:91058,15:65464,16:76795,17:71933


chrom: chr3
strand: -
right_annotated: ENSG00000244675.2:AC108676.1:sense_overlapping:2969
samples:
,0:102,1:51,2:9342,3:12297,4:8349,5:25330,6:17462,7:15464,8:14029,9:22534,10:14099,11:16494,12:17389,13:16564,14:22141,15:20975,16:20240,17:16793


chrom: chr3
strand: +
right_annotated: ENSG00000231770.5:TMEM44-AS1:antisense:1119
samples:
,0:2494,1:1757,2:39646,3:73555,4:23347,5:54385,6:42863,7:47800,8:46658,9:37707,10:55674,11:48650,12:35920,13:36120,14:46608,15:28977,16:45211,17:26162


chrom: chr3
strand: -
right_annotated: ENSG00000145014.17:TMEM44:protein_coding:4561
samples:
,0:11365,1:7362,2:578439,3:606511,4:461179,5:651916,6:774735,7:553157,8:646266,9:514617,10:503407,11:373072,12:519531,13:415138,14:586066,15:311595,16:490122,17:351785


chrom: chr3
strand: +
right_annotated: ENSG00000229334.1:AC046143.3:antisense:972
samples:
,0:3155,1:1512,2:31378,3:34599,4:34998,5:49393,6:45398,7:31063,8:52182,9:33673,10:48677,11:29544,12:45717,13:36895,14:42492,15:23446,16:48042,17:22560


chrom: chr3
strand: -
right_annotated: ENSG00000272707.1:RP11-534C12.1:lincRNA:160
samples:
,2:1266,3:3460,4:1850,5:3773,6:1810,7:1939,8:1763,9:2216,10:1824,11:2834,12:2383,13:1987,14:2982,15:2612,16:4065,17:2048


chrom: chr3
strand: -
right_annotated: ENSG00000041802.10:LSG1:protein_coding:4818
samples:
,0:71014,1:61666,2:482663,3:646177,4:482943,5:874236,6:677401,7:618905,8:749651,9:553439,10:846060,11:534449,12:759151,13:597659,14:745612,15:350760,16:728247,17:313766


chrom: chr3
strand: +
right_annotated: ENSG00000185112.5:FAM43A:protein_coding:2494
samples:
,0:15433,1:759,2:31921,3:15383,4:163970,5:27592,6:131828,7:21412,8:55529,9:39592,10:14990,11:9116,12:72596,13:21090,14:39445,15:14094,16:32509,17:41999


chrom: chr3
strand: -
right_annotated: ENSG00000173950.15:XXYLT1:protein_coding:5409
samples:
,0:28535,1:7888,2:394174,3:424881,4:373754,5:552185,6:521467,7:421269,8:481606,9:442345,10:388682,11:278833,12:327745,13:273345,14:351409,15:211877,16:355248,17:205915


chrom: chr3
strand: +
right_annotated: ENSG00000206600.1:RNU6-25P:snRNA:107
samples:
,0:7516,1:4450,2:89,3:45,4:266,5:265,6:81,7:185,8:319,9:473,10:1389,11:604,12:376,13:602,14:949,15:522,16:1221,17:440


chrom: chr3
strand: -
right_annotated: ENSG00000114331.13:ACAP2:protein_coding:11139
samples:
,0:121636,1:28252,2:374913,3:654731,4:495384,5:988669,6:433553,7:810337,8:553127,9:485447,10:1341231,11:1195434,12:1162695,13:1134422,14:1037738,15:927376,16:1237829,17:528085


chrom: chr3
strand: -
right_annotated: ENSG00000229325.1:ACAP2-IT1:sense_intronic:690
samples:
,0:58,1:91,2:4054,3:10997,4:10024,5:14409,6:12601,7:22936,8:8962,9:7412,10:57865,11:82568,12:60489,13:70674,14:55050,15:59523,16:56943,17:38210


chrom: chr3
strand: -
right_annotated: ENSG00000184203.7:PPP1R2:protein_coding:5126
samples:
,0:71367,1:22399,2:330700,3:374418,4:322484,5:554904,6:380165,7:493561,8:433283,9:393819,10:831574,11:566625,12:567908,13:669890,14:571380,15:469128,16:653678,17:380738


chrom: chr3
strand: -
right_annotated: ENSG00000252620.1:RNU6ATAC24P:snRNA:135
samples:
,0:126,1:31,2:787,3:751,4:594,5:1724,6:595,7:1322,9:550,10:2294,11:2731,12:1884,13:1840,14:615,15:844,16:1461,17:705


chrom: chr3
strand: +
right_annotated: ENSG00000223711.1:AC091633.3:antisense:1041
samples:
,2:1026,3:1796,4:928,5:1667,6:1052,7:1810,8:2985,9:2746,10:1382,11:761,12:1328,13:2883,14:2509,15:4493,16:5141,17:2252


chrom: chr3
strand: +
right_annotated: ENSG00000236844.1:AC091633.2:processed_pseudogene:474
samples:
,0:710,1:289,2:100,3:301,4:366,5:325,6:549,7:85,8:1331,9:680,10:1760,11:991,12:1239,13:569,14:1043,15:939,16:825,17:144


chrom: chr3
strand: -
right_annotated: ENSG00000189058.8:APOD:protein_coding:2197
samples:
,0:102,2:21336,3:36078,4:20602,5:79395,6:44199,7:62866,8:115377,9:59910,10:8684,11:11214,12:12741,13:24358,14:18961,15:22005,16:37931,17:22824


chrom: chr3
strand: +
right_annotated: ENSG00000224769.1:MUC20P1:unprocessed_pseudogene:1680
samples:
,2:8353,3:54578,4:49380,5:105616,6:70588,7:74697,8:81254,9:20676,10:2261,11:12736,12:16664,13:36110,14:20484,15:28295,16:16161,17:9164


chrom: chr3
strand: +
right_annotated: ENSG00000282206.1:RP11-141C7.5:unprocessed_pseudogene:136
samples:
,0:102,1:48,2:1763,3:1642,4:3439,5:878,6:2319,7:1847,8:2429,9:1182,10:2111,11:2690,12:1805,13:1958,14:2732,15:2192,16:2993,17:2424


chrom: chr3
strand: -
right_annotated: ENSG00000271662.1:RP11-141C7.3:processed_pseudogene:1070
samples:
,0:354,1:499,2:9792,3:55567,4:24487,5:47972,6:18975,7:42107,8:32851,9:17888,10:12930,11:29592,12:24189,13:19885,14:22000,15:23209,16:24194,17:15090


chrom: chr3
strand: -
right_annotated: ENSG00000229178.1:AC069513.4:lincRNA:1684
samples:
,0:252,1:202,2:6468,3:19916,4:16777,5:17816,6:23846,7:7693,8:10165,9:11792,10:6789,11:21950,12:20404,13:19907,14:14585,15:9794,16:10672,17:9854


chrom: chr3
strand: +
right_annotated: ENSG00000242086.8:LINC00969:lincRNA:17599
samples:
,0:33540,1:18739,2:426069,3:893231,4:882325,5:1501266,6:888317,7:1039929,8:1054944,9:578331,10:685995,11:813823,12:1340559,13:1394594,14:1140595,15:1091287,16:1271971,17:548304


chrom: chr3
strand: +
right_annotated: ENSG00000215837.7:SDHAP2:transcribed_unprocessed_pseudogene:2001
samples:
,0:15776,1:8625,2:160662,3:203483,4:250326,5:477128,6:367426,7:243343,8:399414,9:167965,10:202671,11:266718,12:362742,13:437862,14:325892,15:234539,16:350268,17:167093


chrom: chr3
strand: +
right_annotated: ENSG00000207650.1:MIR570:miRNA:97
samples:
,0:47,1:251,2:8434,3:9971,4:13423,5:15290,6:9626,7:12627,8:7510,9:3979,10:4846,11:7062,12:8132,13:8760,14:7435,15:6313,16:7653,17:5077


chrom: chr3
strand: +
right_annotated: ENSG00000283426.1:RP11-141C7.2:unitary_pseudogene:416
samples:
,0:217,1:453,2:9669,3:23867,4:16143,5:27863,6:16286,7:20362,8:20203,9:9492,10:16160,11:10014,12:27686,13:37415,14:26487,15:29370,16:37197,17:11514


chrom: chr3
strand: +
right_annotated: ENSG00000176945.16:MUC20:protein_coding:4249
samples:
,0:102,1:199,2:49282,3:47902,4:188073,5:129664,6:128715,7:133283,8:166122,9:140406,10:20300,11:16225,12:66022,13:50916,14:42780,15:66863,16:46344,17:65720


chrom: chr3
strand: -
right_annotated: ENSG00000145113.21:MUC4:protein_coding:21325
samples:
,2:4998,3:7605,4:27184,5:25705,6:28849,7:13769,8:29476,9:18264,10:1835,11:3667,12:12691,13:8121,14:7932,15:9306,16:11877,17:10711


chrom: chr3
strand: -
right_annotated: ENSG00000061938.16:TNK2:protein_coding:11297
samples:
,0:24594,1:9922,2:1365590,3:914016,4:766833,5:1000471,6:1233141,7:1146673,8:1565870,9:590281,10:381334,11:268279,12:250928,13:503132,14:289103,15:512478,16:500893,17:361042


chrom: chr3
strand: +
right_annotated: ENSG00000224614.1:TNK2-AS1:antisense:2096
samples:
,0:815,1:290,2:61213,3:7863,4:31716,5:14922,6:35710,7:8604,8:42621,9:4654,10:17035,11:8770,12:16034,13:23032,14:11135,15:22955,16:26503,17:13076


chrom: chr3
strand: +
right_annotated: ENSG00000226155.1:AC124944.3:antisense:741
samples:
,0:12,2:1060,3:2868,4:978,5:1928,6:1639,7:4609,8:2765,9:3106,10:1708,11:395,12:1038,13:516,14:1312,15:1307,16:1904,17:1204


chrom: chr3
strand: -
right_annotated: ENSG00000273009.1:RP11-352G9.1:lincRNA:606
samples:
,2:1545,3:3922,4:2019,5:2239,6:2045,7:3887,8:2940,9:3120,10:1325,11:404,12:1189,13:1009,14:858,15:2204,16:2448,17:1962


chrom: chr3
strand: -
right_annotated: ENSG00000239122.1:RNU2-11P:snRNA:187
samples:
,1:76,2:473,3:2732,4:1065,5:856,6:542,7:1865,8:529,9:1145,10:458,11:1204,12:918,13:576,14:978,15:2566,16:818,17:1329


chrom: chr3
strand: +
right_annotated: ENSG00000231443.2:AC024937.6:processed_pseudogene:1242
samples:
,0:1029,1:351,2:25342,3:60002,4:30894,5:35031,6:30429,7:55596,8:43943,9:22473,10:31474,11:36133,12:33378,13:16464,14:27172,15:34582,16:39651,17:16596


chrom: chr3
strand: -
right_annotated: ENSG00000260261.1:RP11-480A16.1:lincRNA:3508
samples:
,0:1120,1:1737,2:48511,3:94864,4:55718,5:72064,6:63306,7:84489,8:78834,9:60345,10:118220,11:130091,12:98334,13:73551,14:85098,15:104751,16:104720,17:56341


chrom: chr3
strand: -
right_annotated: ENSG00000185485.14:SDHAP1:transcribed_unprocessed_pseudogene:3353
samples:
,0:17707,1:12729,2:287335,3:325379,4:325660,5:619120,6:454681,7:390780,8:502599,9:251615,10:376710,11:351605,12:531993,13:623055,14:543320,15:386771,16:594732,17:250357


chrom: chr3
strand: +
right_annotated: ENSG00000231464.1:AC024937.4:processed_pseudogene:1242
samples:
,0:781,1:558,2:10529,3:15583,4:11691,5:18591,6:11316,7:19847,8:21200,9:6030,10:8599,11:10140,12:14647,13:10296,14:11215,15:12640,16:14624,17:6972


chrom: chr3
strand: -
right_annotated: ENSG00000072274.12:TFRC:protein_coding:7887
samples:
,0:445968,1:307113,2:443669,3:796126,4:492188,5:1374284,6:552479,7:1112934,8:747987,9:798883,10:1659924,11:1026185,12:1223175,13:1156244,14:1054393,15:781754,16:1325261,17:585057


chrom: chr3
strand: +
right_annotated: ENSG00000228413.1:AC024937.2:processed_pseudogene:344
samples:
,1:46,2:656,3:790,4:400,5:715,6:617,7:200,8:777,9:819,10:919,11:297,12:191,13:523,14:650,15:334,16:1494,17:710


chrom: chr3
strand: -
right_annotated: ENSG00000163958.13:ZDHHC19:protein_coding:2432
samples:
,1:92,2:3366,3:1351,4:2720,5:2224,6:2781,7:3045,8:6633,9:4358,10:1383,11:324,12:200,13:1270,14:1721,15:2932,16:3173,17:2133


chrom: chr3
strand: +
right_annotated: ENSG00000163959.9:SLC51A:protein_coding:5293
samples:
,0:7984,1:1842,2:36716,3:47437,4:33777,5:59805,6:51074,7:59306,8:71664,9:54807,10:53502,11:44333,12:64625,13:42956,14:74864,15:53293,16:86623,17:61706


chrom: chr3
strand: -
right_annotated: ENSG00000161217.11:PCYT1A:protein_coding:7978
samples:
,0:155324,1:38404,2:487244,3:635659,4:387938,5:776786,6:494159,7:644386,8:623956,9:448020,10:742019,11:492737,12:562128,13:378742,14:553518,15:406465,16:613279,17:321637


chrom: chr3
strand: -
right_annotated: ENSG00000272741.1:RP11-447L10.1:protein_coding:708
samples:
,0:24097,1:11163,2:190303,3:197759,4:171306,5:252817,6:221806,7:199577,8:228154,9:180369,10:224508,11:140890,12:154216,13:173172,14:173527,15:112415,16:198530,17:118709


chrom: chr3
strand: +
right_annotated: ENSG00000228028.2:AC069257.8:antisense:429
samples:
,0:90,2:447,3:803,4:130,5:2441,6:314,7:701,8:390,9:811,10:1801,11:3341,12:2669,13:3631,14:5156,15:4952,16:4794,17:5158


chrom: chr3
strand: -
right_annotated: ENSG00000213123.10:TCTEX1D2:protein_coding:1246
samples:
,0:10047,1:7900,2:192263,3:298512,4:189895,5:319751,6:244484,7:287310,8:255068,9:243420,10:272398,11:189182,12:187712,13:234590,14:198751,15:147274,16:234766,17:157626


chrom: chr3
strand: -
right_annotated: ENSG00000237418.1:AC069257.6:processed_pseudogene:155
samples:
,0:34,2:2671,3:20693,4:7059,5:14898,6:7945,7:12348,8:9000,9:14331,10:7901,11:9434,12:9747,13:5772,14:8383,15:8212,16:9648,17:5902


chrom: chr3
strand: -
right_annotated: ENSG00000273331.1:TM4SF19-TCTEX1D2:protein_coding:964
samples:
,0:2676,1:3506,2:49840,3:77101,4:56197,5:86470,6:61401,7:81992,8:61893,9:73063,10:67080,11:43132,12:46376,13:58367,14:51622,15:38526,16:55670,17:35922


chrom: chr3
strand: +
right_annotated: ENSG00000235897.1:TM4SF19-AS1:antisense:2136
samples:
,0:378,1:1105,2:820,3:3526,4:1696,5:1496,6:1858,7:2031,8:2629,9:2393,10:5203,11:3357,12:4403,13:5496,14:6267,15:2618,16:4687,17:2527


chrom: chr3
strand: -
right_annotated: ENSG00000145107.15:TM4SF19:protein_coding:1899
samples:
,0:363,1:2040,2:1164,3:2234,4:585,5:1342,6:1919,7:879,8:1997,9:1277,10:6241,11:5031,12:3829,13:7030,14:5929,15:3325,16:6940,17:3406


chrom: chr3
strand: -
right_annotated: ENSG00000163960.11:UBXN7:protein_coding:11291
samples:
,0:58889,1:19224,2:1559733,3:2813243,4:2229488,5:4477582,6:2114639,7:2987189,8:2262580,9:2402537,10:2808532,11:2866419,12:3471081,13:3190497,14:3384555,15:2327931,16:2926672,17:1659388


chrom: chr3
strand: -
right_annotated: ENSG00000241868.3:RN7SL434P:misc_RNA:271
samples:
,0:194,1:30,2:359,4:955,5:1078,6:514,7:324,8:295,9:203,10:18299,11:7934,12:9450,13:5575,14:12179,15:5396,16:17350,17:3251


chrom: chr3
strand: +
right_annotated: ENSG00000243339.3:RN7SL738P:misc_RNA:297
samples:
,0:293,1:151,2:461,3:1716,4:1056,5:4084,6:1554,7:910,8:2177,9:952,10:5684,11:4591,12:4574,13:7293,14:4359,15:2391,16:7842,17:2963


chrom: chr3
strand: +
right_annotated: ENSG00000226345.1:AC083822.2:processed_pseudogene:201
samples:
,2:318,3:300,5:143,6:32,7:65,8:100,9:101,10:4252,11:4496,12:4737,13:3373,14:6013,15:4465,16:5378,17:2901


chrom: chr3
strand: +
right_annotated: ENSG00000225822.4:UBXN7-AS1:antisense:386
samples:
,0:846,1:458,2:16449,3:9766,4:15099,5:28759,6:17658,7:9036,8:17067,9:11278,10:16903,11:18639,12:13380,13:19107,14:14108,15:14890,16:27513,17:12215


chrom: chr3
strand: -
right_annotated: ENSG00000163961.4:RNF168:protein_coding:5347
samples:
,0:43112,1:17336,2:304979,3:583108,4:288244,5:679277,6:269486,7:505899,8:354760,9:476579,10:1341393,11:954435,12:1162836,13:961422,14:983245,15:645542,16:959822,17:579039


chrom: chr3
strand: +
right_annotated: ENSG00000273013.1:CTD-2002J20.1:antisense:594
samples:
,0:880,1:237,2:5574,3:11804,4:4765,5:15529,6:4900,7:12141,8:7938,9:12079,10:33789,11:24993,12:35825,13:29109,14:30871,15:17718,16:25782,17:16212


chrom: chr3
strand: -
right_annotated: ENSG00000214097.4:SMCO1:protein_coding:1868
samples:
,2:388,3:504,4:200,5:262,6:527,7:202,8:1302,9:202,10:224,11:202,12:758,13:701,14:1129,15:558,16:100,17:790


chrom: chr3
strand: +
right_annotated: ENSG00000225770.1:AC092933.3:processed_pseudogene:171
samples:
,0:2835,1:3507,2:280,3:567,4:72,5:474,6:1029,7:285,8:845,9:438,10:1900,11:266,12:448,13:429,14:375,16:1289


chrom: chr3
strand: -
right_annotated: ENSG00000185798.7:WDR53:protein_coding:1797
samples:
,0:8106,1:5035,2:51647,3:64953,4:40616,5:108608,6:48559,7:60005,8:59412,9:47586,10:78803,11:53492,12:67615,13:59971,14:67317,15:40212,16:56778,17:26019


chrom: chr3
strand: +
right_annotated: ENSG00000174013.7:FBXO45:protein_coding:5976
samples:
,0:24269,1:13695,2:433056,3:754224,4:563809,5:987529,6:586008,7:840381,8:596275,9:618946,10:993883,11:777496,12:916839,13:800329,14:913325,15:578928,16:811382,17:444120


chrom: chr3
strand: -
right_annotated: ENSG00000232065.1:LINC01063:antisense:348
samples:
,0:66,1:19,2:2735,3:5400,4:3722,5:5597,6:3287,7:4630,8:5105,9:1750,10:3875,11:5458,12:5719,13:6668,14:5567,15:3495,16:7838,17:2676


chrom: chr3
strand: +
right_annotated: ENSG00000174004.5:NRROS:protein_coding:2910
samples:
,0:201,2:11382,3:5241,4:6095,5:19159,6:18597,7:18684,8:54866,9:12315,10:2977,11:2222,12:2666,13:5699,14:5930,15:8049,16:14936,17:5451


chrom: chr3
strand: +
right_annotated: ENSG00000163964.13:PIGX:protein_coding:4446
samples:
,0:21108,1:13998,2:258963,3:463572,4:317024,5:575957,6:300022,7:430201,8:328766,9:541157,10:504924,11:331308,12:384741,13:374939,14:398603,15:226131,16:391246,17:266179


chrom: chr3
strand: -
right_annotated: ENSG00000174007.7:CEP19:protein_coding:2201
samples:
,0:4779,1:4159,2:125684,3:156685,4:143225,5:195168,6:130482,7:149009,8:126584,9:160466,10:173691,11:94362,12:152151,13:106260,14:141162,15:64362,16:109735,17:62710


chrom: chr3
strand: -
right_annotated: ENSG00000201441.1:RNU6-646P:snRNA:106
samples:
,2:494,3:458,4:669,5:392,6:688,7:350,8:363,9:759,10:554,11:375,12:1462,13:667,14:524,15:780,16:804,17:608


chrom: chr3
strand: +
right_annotated: ENSG00000180370.10:PAK2:protein_coding:6270
samples:
,0:19617,1:11463,2:2096904,3:3091716,4:2262061,5:4502247,6:2114966,7:3237215,8:2205572,9:1987079,10:1862813,11:2135421,12:1970787,13:2000853,14:2147315,15:2126881,16:1716540,17:1132860


chrom: chr3
strand: -
right_annotated: ENSG00000272359.1:RNU4-89P:snRNA:133
samples:
,0:542,1:1033,3:480,4:33,5:257,6:57,7:542,9:8,10:1471,11:1745,12:73,13:320,14:703,15:2454,16:843,17:557


chrom: chr3
strand: -
right_annotated: ENSG00000206892.1:RNU6-42P:snRNA:107
samples:
,0:3312,1:2311,2:912,3:1318,4:1404,5:1972,6:1115,7:1443,8:1514,9:1946,10:7746,11:6282,12:12132,13:5594,14:14164,15:3971,16:11830,17:4902


chrom: chr3
strand: +
right_annotated: ENSG00000119231.10:SENP5:protein_coding:7035
samples:
,0:95181,1:27813,2:446357,3:887590,4:550050,5:1127633,6:596365,7:881968,8:749171,9:748254,10:1704748,11:1309754,12:1597778,13:1321600,14:1521622,15:907762,16:1535394,17:702680


chrom: chr3
strand: +
right_annotated: ENSG00000230732.4:AC127904.2:sense_intronic:1413
samples:
,0:124,1:73,2:5593,3:7219,4:4539,5:10263,6:5250,7:9163,8:3555,9:6631,10:35594,11:34225,12:36165,13:39496,14:45851,15:46514,16:40355,17:25348


chrom: chr3
strand: -
right_annotated: ENSG00000114503.10:NCBP2:protein_coding:5114
samples:
,0:100414,1:41100,2:1455159,3:2202944,4:1384916,5:2929907,6:1666134,7:2083048,8:1787685,9:1440273,10:2177201,11:1403088,12:1995149,13:1413761,14:1700808,15:963408,16:1601810,17:620399


chrom: chr3
strand: +
right_annotated: ENSG00000225578.1:NCBP2-AS1:antisense:562
samples:
,0:3691,1:2030,2:89513,3:86929,4:61539,5:165308,6:76031,7:78287,8:82304,9:67040,10:60095,11:37809,12:50396,13:45923,14:33516,15:31841,16:64846,17:15551


chrom: chr3
strand: +
right_annotated: ENSG00000270170.1:NCBP2-AS2:protein_coding:918
samples:
,0:15616,1:7093,2:163410,3:148755,4:131691,5:190102,6:195986,7:131282,8:165251,9:122322,10:151133,11:79519,12:105225,13:120110,14:113834,15:51662,16:109395,17:59295


chrom: chr3
strand: -
right_annotated: ENSG00000119227.7:PIGZ:protein_coding:3211
samples:
,0:814,1:903,2:56508,3:63858,4:72311,5:84125,6:135642,7:138065,8:234571,9:194782,10:22826,11:31580,12:32814,13:34455,14:47547,15:51546,16:80469,17:80197


chrom: chr3
strand: -
right_annotated: ENSG00000233487.6:RPSAP69:transcribed_processed_pseudogene:1189
samples:
,0:110,1:161,2:1978,3:2171,4:2244,5:2530,6:2843,7:6768,8:3976,9:6351,10:2199,11:2352,12:1133,13:2630,14:3219,15:3672,16:4647,17:3852


chrom: chr3
strand: -
right_annotated: ENSG00000163975.11:MELTF:protein_coding:8393
samples:
,0:1505,1:19240,2:147715,3:48469,4:98861,5:50298,6:93422,7:61523,8:101337,9:51589,10:70381,11:29019,12:45879,13:34824,14:32073,15:34131,16:52477,17:42197


chrom: chr3
strand: +
right_annotated: ENSG00000228109.1:MFI2-AS1:antisense:1139
samples:
,0:462,1:1446,2:280908,3:92372,4:128097,5:100663,6:179632,7:125918,8:198812,9:55368,10:130248,11:47918,12:72047,13:75932,14:68010,15:72982,16:100759,17:42286


chrom: chr3
strand: -
right_annotated: ENSG00000075711.20:DLG1:protein_coding:11001
samples:
,0:97052,1:22980,2:540157,3:1009472,4:608672,5:1174081,6:434550,7:817650,8:686819,9:511907,10:1380871,11:1426553,12:1428047,13:1221775,14:1061989,15:907481,16:1338303,17:468879


chrom: chr3
strand: +
right_annotated: ENSG00000227375.5:DLG1-AS1:antisense:1694
samples:
,0:1474,1:546,2:1946,3:495,4:615,5:1934,6:140,7:412,8:707,9:63,10:6201,11:1768,12:1041,13:839,14:725,15:301,16:882,17:353


chrom: chr3
strand: -
right_annotated: ENSG00000272989.1:RP13-616I3.1:lincRNA:1725
samples:
,2:5826,3:7961,4:4613,5:6415,6:8376,7:7339,8:16883,9:7961,10:5130,11:5616,12:3866,13:3836,14:6186,15:2209,16:14443,17:3750


chrom: chr3
strand: -
right_annotated: ENSG00000161267.11:BDH1:protein_coding:9114
samples:
,0:4199,1:2132,2:184373,3:204943,4:131042,5:240327,6:220570,7:229651,8:267307,9:259319,10:170086,11:113527,12:137177,13:140069,14:152948,15:123807,16:202289,17:133364


chrom: chr3
strand: -
right_annotated: ENSG00000214135.8:AC024560.3:transcribed_unprocessed_pseudogene:3502
samples:
,0:7893,1:6003,2:423753,3:386248,4:378109,5:523687,6:423651,7:393418,8:449233,9:360487,10:424132,11:371983,12:372054,13:339602,14:370010,15:342869,16:420158,17:255834


chrom: chr3
strand: -
right_annotated: ENSG00000213519.2:AC132008.1:processed_pseudogene:286
samples:
,2:1741,3:3026,4:2347,5:2334,6:2517,7:4082,8:4842,9:1652,10:850,11:1788,12:2233,13:2041,14:1114,15:4126,16:3916,17:2406


chrom: chr3
strand: +
right_annotated: ENSG00000249626.1:RP11-496H1.1:processed_pseudogene:1497
samples:
,0:554,1:566,2:24824,3:74961,4:57270,5:97213,6:43029,7:129749,8:62734,9:46638,10:25996,11:41744,12:47761,13:43528,14:44468,15:59893,16:35607,17:24420


chrom: chr3
strand: +
right_annotated: ENSG00000273308.1:RP11-496H1.2:lincRNA:349
samples:
,2:20162,3:16704,4:14631,5:31622,6:19648,7:32708,8:22742,9:25723,10:10903,11:5410,12:17358,13:9168,14:11827,15:15710,16:15298,17:10536


chrom: chr3
strand: -
right_annotated: ENSG00000236833.1:AC024560.2:lincRNA:1471
samples:
,2:1099,3:2922,4:2334,5:2620,6:4530,7:2954,8:3526,9:2949,10:1080,11:1655,12:2077,13:3252,14:1410,15:2955,16:1824,17:1256


chrom: chr3
strand: -
right_annotated: ENSG00000145016.14:RUBCN:protein_coding:8613
samples:
,0:18590,1:5552,2:693779,3:987881,4:758342,5:1305109,6:1157172,7:1145386,8:1196094,9:1305789,10:779628,11:674723,12:787726,13:683013,14:1129490,15:894677,16:1049634,17:950175


chrom: chr3
strand: +
right_annotated: ENSG00000122068.12:FYTTD1:protein_coding:8025
samples:
,0:131325,1:31080,2:925972,3:1310989,4:1055661,5:1859817,6:1153660,7:1392327,8:1134797,9:1095728,10:1977261,11:1413578,12:1884442,13:1596030,14:1847528,15:968710,16:1712450,17:715444


chrom: chr3
strand: +
right_annotated: ENSG00000273375.1:RP11-803P9.1:lincRNA:670
samples:
,2:498,3:1982,4:400,5:2760,6:803,7:1211,8:644,9:1880,10:5998,11:6008,12:3670,13:5646,14:8031,15:9172,16:5004,17:4950


chrom: chr3
strand: +
right_annotated: ENSG00000186001.12:LRCH3:protein_coding:12639
samples:
,0:27017,1:8894,2:770326,3:1068322,4:754446,5:1371719,6:769733,7:1007998,8:960006,9:740435,10:1144085,11:1068696,12:1092628,13:1046386,14:1079011,15:947771,16:1195122,17:568044


chrom: chr3
strand: -
right_annotated: ENSG00000234136.1:AC055764.1:antisense:473
samples:
,0:1129,1:257,2:10254,3:7739,4:8815,5:19141,6:8730,7:12133,8:9635,9:9201,10:38838,11:35551,12:30762,13:34659,14:40769,15:29087,16:35416,17:15041


chrom: chr3
strand: -
right_annotated: ENSG00000234742.1:AC144530.1:processed_pseudogene:555
samples:
,0:45890,1:18051,2:17145,3:55734,4:14781,5:53909,6:19949,7:38973,8:31742,9:17643,10:63773,11:34459,12:46647,13:52082,14:37147,15:25323,16:46412,17:18466


chrom: chr3
strand: -
right_annotated: ENSG00000114473.13:IQCG:protein_coding:7474
samples:
,0:9540,1:3697,2:113067,3:286570,4:170940,5:325473,6:238032,7:307504,8:291339,9:309917,10:256443,11:259943,12:357056,13:296151,14:344481,15:231357,16:411033,17:188230


chrom: chr3
strand: +
right_annotated: ENSG00000182899.14:RPL35A:protein_coding:2977
samples:
,0:429666,1:180967,2:3440396,3:5025322,4:3304713,5:7279024,6:3481967,7:5155979,8:4738027,9:2259763,10:5439945,11:2563827,12:4245965,13:3673336,14:3587414,15:1712057,16:4556558,17:875723


chrom: chr3
strand: +
right_annotated: ENSG00000185621.11:LMLN:protein_coding:8692
samples:
,0:4036,1:1335,2:173388,3:221347,4:162560,5:270646,6:170505,7:214183,8:225240,9:313491,10:118788,11:140445,12:102744,13:99367,14:115911,15:121839,16:136844,17:135283


chrom: chr3
strand: -
right_annotated: ENSG00000232832.1:LMLN-AS1:antisense:542
samples:
,0:102,1:51,2:10527,3:8483,4:7942,5:14738,6:9227,7:9711,8:14143,9:16655,10:5146,11:5052,12:3408,13:4554,14:5026,15:5065,16:6784,17:6033


chrom: chr3
strand: +
right_annotated: ENSG00000213113.3:TUBB8P8:unprocessed_pseudogene:1058
samples:
,0:203,1:51,2:2970,3:87,4:1332,5:95,6:3422,7:2159,8:4604,9:404,10:465,12:495,14:854,15:1010,16:2557,17:505


chrom: chr3
strand: +
right_annotated: ENSG00000236438.7:FAM157A:transcribed_unprocessed_pseudogene:7091
samples:
,0:252,1:805,2:63114,3:72075,4:56850,5:68175,6:50327,7:77662,8:104095,9:40410,10:29476,11:29143,12:25863,13:22150,14:21836,15:45725,16:41111,17:23389


chrom: chr3
strand: -
right_annotated: ENSG00000230304.1:CICP6:processed_pseudogene:2729
samples:
,1:51,2:4205,3:4966,4:3757,5:4972,6:3421,7:6219,8:5565,9:3020,10:4342,11:4812,12:2358,13:3340,14:2684,15:5405,16:2938,17:2467


chrom: chr3
strand: +
right_annotated: ENSG00000226008.1:SEPT14P3:unprocessed_pseudogene:183
samples:
,0:102,2:1289,3:2429,4:1551,5:1465,6:500,7:1512,8:2033,9:729,10:2145,11:1616,12:1061,13:451,14:1302,15:1884,16:1677,17:439


chrom: chr4
strand: +
right_annotated: ENSG00000272602.5:ZNF595:protein_coding:3933
samples:
,0:5588,1:4460,2:211173,3:306171,4:261989,5:458017,6:216879,7:366502,8:257390,9:234378,10:530960,11:523249,12:679359,13:549319,14:692204,15:409466,16:600872,17:259949


chrom: chr4
strand: +
right_annotated: ENSG00000250312.6:ZNF718:protein_coding:4118
samples:
,0:5987,1:1600,2:157461,3:230400,4:310876,5:418838,6:225929,7:268694,8:115117,9:80767,10:478409,11:418350,12:577540,13:426796,14:431894,15:302002,16:241381,17:113855


chrom: chr4
strand: +
right_annotated: ENSG00000275426.1:CH17-262A2.1:sense_intronic:580
samples:
,0:141,3:462,4:883,5:317,6:265,7:281,10:10321,11:23346,12:4008,13:9185,14:2510,15:6521,16:3023,17:5030


chrom: chr4
strand: -
right_annotated: ENSG00000250892.1:RP11-1365D11.1:unprocessed_pseudogene:950
samples:
,2:5607,3:6516,4:5770,5:11641,6:8298,7:10616,8:9894,9:7235,10:13919,11:10774,12:12029,13:7633,14:15383,15:9268,16:15408,17:10834


chrom: chr4
strand: +
right_annotated: ENSG00000198155.5:ZNF876P:transcribed_unprocessed_pseudogene:2804
samples:
,0:1940,1:30,2:25743,3:37799,4:28518,5:55955,6:26474,7:39126,8:27555,9:32067,10:101462,11:96789,12:74013,13:64338,14:93303,15:75233,16:98470,17:47291


chrom: chr4
strand: -
right_annotated: ENSG00000251188.1:RP11-478C6.6:processed_pseudogene:550
samples:
,0:11,2:3522,3:6714,4:5658,5:8044,6:1228,7:5690,8:3572,9:3314,10:27585,11:17913,12:11704,13:8765,14:5617,15:7090,16:5989,17:3832


chrom: chr4
strand: -
right_annotated: ENSG00000251689.1:RP11-478C6.5:processed_pseudogene:310
samples:
,2:1968,3:2380,4:736,5:2345,6:386,7:863,8:372,9:513,10:11322,11:7919,12:3991,13:2324,14:984,15:1690,16:2514,17:132


chrom: chr4
strand: -
right_annotated: ENSG00000186777.11:ZNF732:protein_coding:2193
samples:
,0:545,1:255,2:24861,3:41998,4:18634,5:41822,6:11338,7:30234,8:16557,9:17291,10:132773,11:84551,12:61937,13:41330,14:30525,15:35696,16:33412,17:14158


chrom: chr4
strand: -
right_annotated: ENSG00000251535.1:RP11-478C6.1:processed_pseudogene:529
samples:
,0:167,2:786,3:152,4:1540,5:329,6:1903,7:535,8:883,9:353,10:1266,11:576,12:2027,13:716,14:1659,15:318,16:2402,17:1905


chrom: chr4
strand: +
right_annotated: ENSG00000131127.13:ZNF141:protein_coding:5744
samples:
,0:8837,1:4173,2:212243,3:324708,4:263905,5:464298,6:228327,7:322118,8:245633,9:276400,10:850420,11:734321,12:953970,13:724750,14:872171,15:540093,16:729785,17:311122


chrom: chr4
strand: -
right_annotated: ENSG00000248564.1:RP11-478C6.2:processed_pseudogene:487
samples:
,0:51,1:181,2:617,3:218,4:668,5:873,6:2171,7:419,8:2177,9:268,10:6182,11:4184,12:4698,13:6777,14:5308,15:6310,16:8204,17:3413


chrom: chr4
strand: -
right_annotated: ENSG00000250321.1:RP11-478C6.4:processed_pseudogene:142
samples:
,0:6937,1:5831,2:539,3:482,4:477,5:502,6:670,7:410,8:454,9:208,10:3980,11:2708,12:2067,13:1966,14:1696,15:2006,16:2764,17:1176


chrom: chr4
strand: +
right_annotated: ENSG00000281016.1:RP11-2H3.7:antisense:753
samples:
,0:51,1:102,2:229,3:1377,4:813,5:558,6:362,7:1700,8:494,9:841,10:17724,11:29386,12:15946,13:10680,14:17722,15:15933,16:20130,17:16263


chrom: chr4
strand: +
right_annotated: ENSG00000249025.1:ZNF519P4:processed_pseudogene:125
samples:
,0:33,2:431,3:570,4:635,5:1657,6:710,7:1230,8:999,9:353,10:3178,11:2753,12:2552,13:2241,14:2441,15:1772,16:1917,17:1202


chrom: chr4
strand: -
right_annotated: ENSG00000272885.1:RP11-2H3.6:lincRNA:420
samples:
,2:2219,3:7484,4:4009,5:4945,6:3318,7:6354,8:4096,9:3020,10:2955,11:3105,12:4739,13:3162,14:5198,15:4599,16:4631,17:2064


chrom: chr4
strand: -
right_annotated: ENSG00000251595.7:ABCA11P:transcribed_processed_pseudogene:2790
samples:
,0:9775,1:3136,2:102552,3:183441,4:86453,5:202971,6:115601,7:157186,8:112299,9:115460,10:263838,11:211410,12:189897,13:154769,14:212604,15:122334,16:175361,17:85588


chrom: chr4
strand: -
right_annotated: ENSG00000182903.15:ZNF721:protein_coding:6390
samples:
,0:17590,1:6442,2:549162,3:842821,4:632138,5:1343410,6:738549,7:1158182,8:780927,9:964756,10:1094355,11:1053662,12:1359902,13:1175754,14:1594064,15:1046068,16:1316606,17:728624


chrom: chr4
strand: +
right_annotated: ENSG00000174227.15:PIGG:protein_coding:10895
samples:
,0:65112,1:28331,2:737346,3:809032,4:411692,5:838559,6:590787,7:758488,8:744667,9:571516,10:817251,11:592529,12:487850,13:509366,14:456501,15:441697,16:579037,17:331586


chrom: chr4
strand: -
right_annotated: ENSG00000273238.1:RP11-1263C18.1:lincRNA:533
samples:
,2:7244,3:24799,4:15027,5:28961,6:19373,7:54054,8:33907,9:44409,10:17076,11:28276,12:19910,13:23711,14:28894,15:32925,16:45219,17:38490


chrom: chr4
strand: +
right_annotated: ENSG00000283183.1:RP11-1263C18.2:lincRNA:1854
samples:
,2:43633,3:48346,4:37022,5:84790,6:83615,7:109324,8:163136,9:135150,10:71703,11:78770,12:50168,13:83862,14:74249,15:110062,16:201070,17:154990


chrom: chr4
strand: +
right_annotated: ENSG00000133256.12:PDE6B:protein_coding:5086
samples:
,0:51,1:143,2:204565,3:288157,4:146306,5:160961,6:135632,7:306168,8:174023,9:88139,10:173854,11:111391,12:93690,13:86516,14:46184,15:86364,16:77501,17:40121


chrom: chr4
strand: -
right_annotated: ENSG00000242686.4:RP11-1191J2.2:antisense:2353
samples:
,2:129500,3:230755,4:91072,5:93749,6:112311,7:357766,8:109192,9:86685,10:26393,11:34919,12:14747,13:25745,14:14831,15:54239,16:14571,17:25843


chrom: chr4
strand: -
right_annotated: ENSG00000272927.1:RP11-1191J2.5:antisense:737
samples:
,2:34400,3:47791,4:23502,5:27783,6:27557,7:62469,8:30330,9:20290,10:13388,11:9428,12:6927,13:8340,14:5494,15:15766,16:12720,17:7234


chrom: chr4
strand: -
right_annotated: ENSG00000169020.9:ATP5I:protein_coding:940
samples:
,0:99616,1:61421,2:369069,3:356800,4:291213,5:656593,6:542163,7:471073,8:578933,9:323271,10:732965,11:237549,12:578555,13:417759,14:550580,15:164237,16:578695,17:181214


chrom: chr4
strand: +
right_annotated: ENSG00000215375.6:MYL5:protein_coding:4305
samples:
,0:54650,1:26593,2:275311,3:240380,4:195235,5:434370,6:370488,7:318218,8:382550,9:241786,10:387988,11:124072,12:282042,13:209544,14:272764,15:96177,16:331168,17:109272


chrom: chr4
strand: -
right_annotated: ENSG00000169026.12:MFSD7:protein_coding:2644
samples:
,0:9342,1:456,2:10157,3:7904,4:4553,5:8581,6:7973,7:8844,8:11605,9:5550,10:15702,11:4464,12:7445,13:8264,14:6941,15:5014,16:11938,17:6178


chrom: chr4
strand: +
right_annotated: ENSG00000185619.18:PCGF3:protein_coding:7425
samples:
,0:75735,1:25933,2:2295288,3:2631623,4:2019751,5:3092892,6:2099377,7:2291018,8:2951523,9:1576312,10:2409842,11:2024984,12:2216760,13:2169570,14:1911571,15:1543139,16:2400361,17:1104980


chrom: chr4
strand: -
right_annotated: ENSG00000248416.1:RP11-1191J2.4:antisense:569
samples:
,2:57,3:850,4:194,5:524,6:198,7:722,8:200,9:160,10:2966,11:3418,12:3465,13:3597,14:2894,15:7668,16:7679,17:5062


chrom: chr4
strand: -
right_annotated: ENSG00000272588.1:RP11-440L14.4:antisense:719
samples:
,2:7436,3:10020,4:6350,5:7249,6:7548,7:7496,8:4781,9:3645,10:8421,11:7853,12:9530,13:9756,14:12985,15:15161,16:12547,17:5693


chrom: chr4
strand: -
right_annotated: ENSG00000249592.5:RP11-440L14.1:antisense:1575
samples:
,0:8117,1:2575,2:251003,3:331292,4:261476,5:395430,6:229677,7:306545,8:350860,9:218126,10:317000,11:260032,12:330463,13:272990,14:271493,15:224624,16:322937,17:141571


chrom: chr4
strand: -
right_annotated: ENSG00000233799.1:AC139887.4:antisense:286
samples:
,0:1489,1:910,2:42297,3:40599,4:35857,5:56651,6:47413,7:34765,8:63059,9:27351,10:53932,11:35978,12:49376,13:50817,14:44778,15:33420,16:57211,17:26786


chrom: chr4
strand: -
right_annotated: ENSG00000168993.14:CPLX1:protein_coding:2418
samples:
,0:220,1:100,2:249430,3:67491,4:298037,5:86968,6:263822,7:58284,8:272424,9:99297,10:34570,11:30649,12:76544,13:58277,14:73775,15:56905,16:108296,17:170569


chrom: chr4
strand: -
right_annotated: ENSG00000178950.16:GAK:protein_coding:15155
samples:
,0:73874,1:38828,2:1634626,3:909809,4:1016035,5:1045034,6:1368002,7:858540,8:1418270,9:585168,10:834974,11:518409,12:587539,13:515683,14:598674,15:514333,16:724080,17:424902


chrom: chr4
strand: +
right_annotated: ENSG00000127419.16:TMEM175:protein_coding:3623
samples:
,0:12679,1:3156,2:485210,3:294081,4:328685,5:400594,6:596639,7:458706,8:660585,9:315799,10:154305,11:126486,12:114507,13:147194,14:146300,15:211053,16:218624,17:208504


chrom: chr4
strand: -
right_annotated: ENSG00000145214.13:DGKQ:protein_coding:4970
samples:
,0:38450,1:14412,2:397650,3:230222,4:212673,5:289605,6:331872,7:297065,8:382388,9:173039,10:235553,11:137801,12:120108,13:203164,14:115114,15:166009,16:191072,17:133563


chrom: chr4
strand: -
right_annotated: ENSG00000145217.13:SLC26A1:protein_coding:4293
samples:
,0:5515,1:2171,2:112894,3:48867,4:80217,5:79005,6:145281,7:104282,8:213751,9:51843,10:78816,11:56530,12:65525,13:100906,14:68714,15:110213,16:145174,17:83922


chrom: chr4
strand: +
right_annotated: ENSG00000127415.12:IDUA:protein_coding:4000
samples:
,0:4634,1:1572,2:408538,3:187674,4:280800,5:180932,6:261490,7:197167,8:322189,9:85753,10:86397,11:67724,12:68715,13:134619,14:62980,15:135698,16:119672,17:100179


chrom: chr4
strand: +
right_annotated: ENSG00000127418.14:FGFRL1:protein_coding:4145
samples:
,0:25416,1:8325,2:385946,3:123388,4:143635,5:190745,6:164882,7:132139,8:265167,9:67450,10:158123,11:56288,12:82521,13:85491,14:52784,15:66494,16:96344,17:39503


chrom: chr4
strand: -
right_annotated: ENSG00000178222.12:RNF212:protein_coding:5003
samples:
,0:610,1:559,2:19018,3:42140,4:16908,5:31378,6:32708,7:30879,8:44012,9:20129,10:20834,11:32446,12:10100,13:16372,14:20333,15:17290,16:28033,17:10196


chrom: chr4
strand: -
right_annotated: ENSG00000251639.2:RP11-20I20.1:processed_pseudogene:1204
samples:
,1:98,2:1640,3:2668,4:336,5:2813,6:839,7:2571,8:629,9:1742,10:4081,11:2665,12:2543,13:2771,14:1721,15:3795,16:2857,17:2330


chrom: chr4
strand: +
right_annotated: ENSG00000251652.1:RP11-20I20.2:antisense:515
samples:
,1:51,2:155,3:977,4:200,5:911,6:818,7:419,8:587,9:45,10:1991,11:5968,12:1252,13:1190,14:3105,15:4532,16:3081,17:2046


chrom: chr4
strand: -
right_annotated: ENSG00000215367.10:TMED11P:transcribed_unitary_pseudogene:756
samples:
,3:914,4:53,5:184,6:753,7:662,8:598,9:366,10:2916,11:10542,12:1582,13:2977,14:4320,15:7469,16:2705,17:2397


chrom: chr4
strand: +
right_annotated: ENSG00000227189.2:AC092535.3:antisense:2165
samples:
,0:102,2:867,3:3544,4:1985,5:628,6:1718,7:1290,8:1982,9:1145,10:8227,11:15993,12:4005,13:6962,14:8439,15:12597,16:8623,17:7219


chrom: chr4
strand: -
right_annotated: ENSG00000159674.11:SPON2:protein_coding:6013
samples:
,0:21734,1:102,2:49374,3:19746,4:43994,5:28598,6:65062,7:30179,8:67840,9:20921,10:27610,11:23187,12:22379,13:24364,14:27300,15:26068,16:45388,17:22916


chrom: chr4
strand: +
right_annotated: ENSG00000273179.1:RP11-20I20.4:antisense:397
samples:
,0:404,2:945,3:3700,4:1736,5:1198,6:2478,7:3446,8:2756,9:1842,10:2846,11:2633,12:1550,13:1936,14:1090,15:1843,16:1778,17:743


chrom: chr4
strand: +
right_annotated: ENSG00000280927.1:CTBP1-AS:antisense:3886
samples:
,0:57444,1:30497,2:987674,3:266091,4:611011,5:392518,6:847018,7:216373,8:720328,9:151446,10:446648,11:235669,12:263296,13:334624,14:259831,15:187686,16:353815,17:239407


chrom: chr4
strand: -
right_annotated: ENSG00000159692.15:CTBP1:protein_coding:8361
samples:
,0:180405,1:95630,2:3044029,3:1301963,4:2179803,5:1826196,6:2699095,7:1232781,8:2413826,9:890072,10:2089956,11:1091651,12:1376885,13:1432307,14:1270646,15:866328,16:1573327,17:870066


chrom: chr4
strand: +
right_annotated: ENSG00000196810.4:CTBP1-AS2:antisense:7820
samples:
,0:7915,1:3715,2:474526,3:388985,4:414193,5:554245,6:560124,7:406643,8:571992,9:327037,10:341798,11:306695,12:331370,13:288849,14:377031,15:317477,16:391383,17:249867


chrom: chr4
strand: +
right_annotated: ENSG00000090316.15:MAEA:protein_coding:9857
samples:
,0:84279,1:46194,2:1121474,3:651510,4:652351,5:917525,6:1107672,7:705369,8:1054001,9:465097,10:745734,11:426484,12:565712,13:565507,14:539280,15:389433,16:606240,17:326351


chrom: chr4
strand: +
right_annotated: ENSG00000163945.15:UVSSA:protein_coding:7830
samples:
,0:12009,1:7665,2:289995,3:304092,4:207441,5:350122,6:233297,7:355747,8:302885,9:132212,10:191387,11:197140,12:145824,13:189650,14:143451,15:285153,16:187270,17:131205


chrom: chr4
strand: +
right_annotated: ENSG00000254094.1:AC078852.1:sense_intronic:527
samples:
,0:433,1:92,2:324,3:30,4:417,5:61,6:117,7:151,8:469,10:1137,11:1510,12:589,13:1687,14:885,15:1390,16:1511,17:726


chrom: chr4
strand: +
right_annotated: ENSG00000179979.8:CRIPAK:protein_coding:4438
samples:
,0:612,1:190,2:265806,3:364659,4:174839,5:279989,6:229414,7:381193,8:274828,9:151338,10:47281,11:95081,12:48553,13:77504,14:56496,15:149793,16:61136,17:85187


chrom: chr4
strand: -
right_annotated: ENSG00000174137.12:FAM53A:protein_coding:4239
samples:
,0:3966,1:797,2:20702,3:7435,4:10337,5:7188,6:18763,7:6907,8:17224,9:6882,10:18770,11:9328,12:5463,13:8848,14:5778,15:3959,16:10562,17:6254


chrom: chr4
strand: -
right_annotated: ENSG00000207009.1:Y_RNA:misc_RNA:110
samples:
,0:16,1:45,2:45,3:288,4:69,5:187,6:71,7:108,8:45,9:141,10:756,11:654,12:343,13:154,14:110,15:78,16:378,17:419


chrom: chr4
strand: -
right_annotated: ENSG00000163950.12:SLBP:protein_coding:2026
samples:
,0:77814,1:47338,2:462132,3:611503,4:535430,5:837997,6:526036,7:738353,8:599710,9:529740,10:674082,11:421619,12:518888,13:524953,14:485198,15:355234,16:541075,17:265197


chrom: chr4
strand: +
right_annotated: ENSG00000270195.1:RP11-572O17.1:lincRNA:802
samples:
,0:355,1:704,2:22138,3:13203,4:11236,5:12752,6:14236,7:9857,8:24718,9:4069,10:16549,11:9068,12:13021,13:14803,14:7980,15:6780,16:17438,17:5912


chrom: chr4
strand: -
right_annotated: ENSG00000168936.10:TMEM129:protein_coding:3442
samples:
,0:49735,1:18928,2:534995,3:342986,4:301168,5:389976,6:525044,7:396140,8:498571,9:226906,10:350304,11:200446,12:173790,13:232705,14:173912,15:134542,16:284172,17:117755


chrom: chr4
strand: +
right_annotated: ENSG00000013810.18:TACC3:protein_coding:6528
samples:
,0:53081,1:33391,2:875788,3:507937,4:359317,5:598626,6:236704,7:246443,8:192876,9:49088,10:504251,11:227954,12:293410,13:279379,14:134341,15:104307,16:87491,17:28789


chrom: chr4
strand: +
right_annotated: ENSG00000068078.17:FGFR3:protein_coding:4834
samples:
,0:4347,1:5051,2:952851,3:328004,4:37718,5:625445,6:38278,7:331525,8:572920,9:55051,10:120250,11:192327,12:21856,13:382187,14:15356,15:153636,16:291018,17:41859


chrom: chr4
strand: -
right_annotated: ENSG00000168924.14:LETM1:protein_coding:8184
samples:
,0:136823,1:93700,2:849557,3:884388,4:698026,5:1280219,6:912451,7:1076801,8:1064993,9:782886,10:1216895,11:794285,12:989307,13:866755,14:1083188,15:767222,16:1269058,17:730471


chrom: chr4
strand: +
right_annotated: ENSG00000109685.17:WHSC1:protein_coding:19776
samples:
,0:145571,1:95162,2:4091645,3:4343958,4:3388157,5:5825430,6:3688616,7:3950206,8:3623701,9:3006070,10:4753412,11:3855702,12:5031450,13:3866671,14:4547747,15:2936684,16:3836152,17:2226485


chrom: chr4
strand: +
right_annotated: ENSG00000249784.1:SCARNA22:scaRNA:125
samples:
,0:8209,1:7895,2:2476,3:4149,4:1186,5:2998,6:2607,7:2173,8:840,9:1158,10:99137,11:34725,12:44384,13:48756,14:21575,15:35987,16:23455,17:6526


chrom: chr4
strand: -
right_annotated: ENSG00000185049.13:NELFA:protein_coding:5935
samples:
,0:14307,1:11836,2:904847,3:378181,4:564298,5:551358,6:833921,7:414770,8:765521,9:242387,10:406275,11:228888,12:314408,13:277093,14:325791,15:265404,16:358492,17:218242


chrom: chr4
strand: +
right_annotated: ENSG00000243449.6:C4orf48:protein_coding:540
samples:
,0:10080,1:1861,2:266511,3:16862,4:348525,5:17733,6:192688,7:6541,8:88603,9:5069,10:77587,11:33731,12:48030,13:100871,14:35036,15:23023,16:85687,17:82131


chrom: chr4
strand: +
right_annotated: ENSG00000185818.7:NAT8L:protein_coding:5871
samples:
,0:306,1:6817,2:1473536,3:683182,4:803697,5:985437,6:1054194,7:761290,8:1169021,9:544016,10:409331,11:314055,12:370134,13:578918,14:365465,15:404048,16:523847,17:434616


chrom: chr4
strand: -
right_annotated: ENSG00000130997.16:POLN:protein_coding:7721
samples:
,0:4300,1:4310,2:48714,3:58841,4:45680,5:85843,6:56007,7:62127,8:67308,9:59067,10:116444,11:86051,12:82248,13:88589,14:101884,15:74693,16:98797,17:61000


chrom: chr4
strand: -
right_annotated: ENSG00000249006.1:RP11-317B7.2:processed_pseudogene:1900
samples:
,0:89,3:808,4:698,5:1515,7:606,8:800,9:569,10:2000,11:2624,12:684,13:1498,14:1747,15:2193,16:997,17:2796


chrom: chr4
strand: -
right_annotated: ENSG00000214367.7:HAUS3:protein_coding:7067
samples:
,0:22953,1:14674,2:342548,3:504180,4:379738,5:701702,6:340603,7:545428,8:353742,9:314604,10:896577,11:663684,12:804368,13:643913,14:723603,15:462086,16:681991,17:304367


chrom: chr4
strand: +
right_annotated: ENSG00000249047.2:COX6B1P5:processed_pseudogene:249
samples:
,0:150,1:102,2:286,3:1022,4:2036,5:984,6:1965,7:756,8:1406,9:733,10:2571,11:4200,12:3972,13:3877,14:5191,15:3494,16:4220,17:2906


chrom: chr4
strand: -
right_annotated: ENSG00000123933.15:MXD4:protein_coding:7058
samples:
,0:134845,1:20533,2:2442858,3:1265353,4:1346461,5:1674690,6:1617684,7:1237923,8:1860333,9:632582,10:1084103,11:688715,12:718418,13:904546,14:573542,15:546243,16:890187,17:390082


chrom: chr4
strand: -
right_annotated: ENSG00000159733.13:ZFYVE28:protein_coding:9624
samples:
,0:4575,1:2099,2:73239,3:44861,4:58622,5:50354,6:118749,7:49140,8:124228,9:77938,10:39334,11:33303,12:38273,13:35114,14:62211,15:40162,16:75847,17:74665


chrom: chr4
strand: +
right_annotated: ENSG00000206113.9:CFAP99:protein_coding:5198
samples:
,1:154,2:5003,3:1953,4:4132,5:3023,6:3847,7:2634,8:3962,9:2825,10:2482,11:1098,12:695,13:1620,14:1053,15:1879,16:2270,17:2695


chrom: chr4
strand: +
right_annotated: ENSG00000063978.15:RNF4:protein_coding:7270
samples:
,0:85031,1:42230,2:1062095,3:963924,4:747127,5:1315499,6:942198,7:915762,8:1062170,9:756687,10:1179998,11:717794,12:765568,13:608514,14:654297,15:452778,16:758278,17:406061


chrom: chr4
strand: +
right_annotated: ENSG00000248399.1:RP11-503N18.4:sense_intronic:220
samples:
,2:414,3:570,4:552,5:1064,6:1133,7:1233,8:1343,9:1214,10:599,11:900,12:2021,13:471,14:1567,15:1748,16:1627,17:1525


chrom: chr4
strand: -
right_annotated: ENSG00000251229.1:RP11-503N18.5:processed_pseudogene:900
samples:
,0:523,1:98,2:835,3:2724,4:584,5:839,6:551,7:3228,8:308,9:1145,10:30364,11:15128,12:20765,13:19196,14:19185,15:20527,16:17894,17:11611


chrom: chr4
strand: +
right_annotated: ENSG00000125386.15:FAM193A:protein_coding:6959
samples:
,0:9637,1:5336,2:1383895,3:1011524,4:1061686,5:1515192,6:1382049,7:1033943,8:1333553,9:739849,10:721341,11:670782,12:736340,13:708737,14:898486,15:841879,16:773536,17:549712


chrom: chr4
strand: -
right_annotated: ENSG00000248155.1:WI2-89927D4.1:unprocessed_pseudogene:277
samples:
,0:1733,1:306,2:2694,3:2076,4:1980,5:4216,6:1898,7:2188,8:3587,9:2618,10:4706,11:6146,12:2127,13:3547,14:3723,15:4259,16:3803,17:3123


chrom: chr4
strand: -
right_annotated: ENSG00000168884.14:TNIP2:protein_coding:2686
samples:
,0:55140,1:28717,2:134903,3:86031,4:77535,5:94180,6:70909,7:61210,8:79023,9:24040,10:148467,11:62682,12:72597,13:70278,14:48304,15:36045,16:61583,17:21582


chrom: chr4
strand: +
right_annotated: ENSG00000087266.15:SH3BP2:protein_coding:13968
samples:
,0:25149,1:3171,2:3320191,3:2455936,4:2053375,5:3144765,6:2973769,7:2834774,8:3286174,9:1491474,10:1719096,11:1185845,12:1168211,13:1398128,14:1161219,15:1295216,16:1579446,17:807596


chrom: chr4
strand: +
right_annotated: ENSG00000087274.16:ADD1:protein_coding:13106
samples:
,0:218321,1:59329,2:6060087,3:5265072,4:4552116,5:7827016,6:6439943,7:5972507,8:6678831,9:4259987,10:4660567,11:3445752,12:4331985,13:3449842,14:4699101,15:3253414,16:4404822,17:2556667


chrom: chr4
strand: -
right_annotated: ENSG00000109736.14:MFSD10:protein_coding:3159
samples:
,0:66516,1:34225,2:934527,3:452574,4:523048,5:677149,6:997789,7:674252,8:1122615,9:346587,10:414311,11:258839,12:195151,13:396789,14:198908,15:298215,16:411828,17:295636


chrom: chr4
strand: +
right_annotated: ENSG00000249673.6:NOP14-AS1:antisense:7195
samples:
,0:19038,1:9832,2:442331,3:349148,4:436678,5:522311,6:460873,7:365427,8:535754,9:276615,10:442214,11:349740,12:471029,13:331590,14:359157,15:290695,16:400955,17:217067


chrom: chr4
strand: -
right_annotated: ENSG00000087269.15:NOP14:protein_coding:3538
samples:
,0:65645,1:46409,2:408476,3:438387,4:348980,5:516353,6:311426,7:417521,8:362757,9:205941,10:572890,11:362907,12:468198,13:315397,14:360361,15:273926,16:368080,17:149474


chrom: chr4
strand: +
right_annotated: ENSG00000125388.19:GRK4:protein_coding:4686
samples:
,0:9494,1:391,2:205453,3:299630,4:218266,5:289210,6:213687,7:306979,8:246527,9:187016,10:412291,11:328160,12:481859,13:386791,14:491317,15:330360,16:496203,17:199511


chrom: chr4
strand: -
right_annotated: ENSG00000251075.1:HTT-AS:antisense:515
samples:
,2:766,3:846,4:1061,5:1238,6:1771,7:1944,8:1402,9:1774,10:568,11:720,12:1028,13:453,14:1322,15:1525,16:960,17:765


chrom: chr4
strand: +
right_annotated: ENSG00000197386.10:HTT:protein_coding:18128
samples:
,0:42715,1:23585,2:2261692,3:2237076,4:1735758,5:3543790,6:2736927,7:2669685,8:3089169,9:2058361,10:1884845,11:1993971,12:2048906,13:1838644,14:2446429,15:2085829,16:2526631,17:1591648


chrom: chr4
strand: +
right_annotated: ENSG00000188981.10:MSANTD1:protein_coding:7553
samples:
,0:51,1:280,2:26499,3:18580,4:13363,5:26562,6:30193,7:37614,8:73117,9:60650,10:26633,11:28229,12:21735,13:38898,14:30263,15:48801,16:79706,17:75856


chrom: chr4
strand: +
right_annotated: ENSG00000159788.18:RGS12:protein_coding:13536
samples:
,0:24521,1:12872,2:1934350,3:1598073,4:1381400,5:1988735,6:1968263,7:1653771,8:2094179,9:957764,10:1453281,11:1004580,12:1106147,13:1041712,14:1105487,15:1082672,16:1312536,17:625803


chrom: chr4
strand: +
right_annotated: ENSG00000248840.2:RP11-357G3.2:transcribed_processed_pseudogene:547
samples:
,2:1966,3:3734,4:1148,5:4308,6:2200,7:3026,8:2736,9:1939,10:3347,11:7212,12:4946,13:3809,14:4063,15:8990,16:2742,17:3464


chrom: chr4
strand: +
right_annotated: ENSG00000109758.8:HGFAC:protein_coding:2847
samples:
,0:92,1:102,2:205403,3:98742,4:114746,5:105723,6:191399,7:172690,8:215887,9:26896,10:61104,11:41938,12:45472,13:69773,14:40016,15:101463,16:79429,17:25956


chrom: chr4
strand: +
right_annotated: ENSG00000175920.15:DOK7:protein_coding:4031
samples:
,1:540,2:6475,3:3385,4:1532,5:1771,6:5064,7:1753,8:2519,9:1303,10:4900,11:6434,12:2942,13:7076,14:3991,15:6444,16:4667,17:3366


chrom: chr4
strand: -
right_annotated: ENSG00000261643.1:RP11-529E10.6:sense_overlapping:861
samples:
,0:204,1:314,2:13086,3:24599,4:10697,5:22264,6:8817,7:18832,8:10111,9:7462,10:14006,11:11893,12:18815,13:11083,14:8710,15:12552,16:10072,17:7364


chrom: chr4
strand: -
right_annotated: ENSG00000163956.10:LRPAP1:protein_coding:8724
samples:
,0:189666,1:62539,2:757957,3:563171,4:475150,5:820046,6:901151,7:578561,8:882551,9:484223,10:873126,11:494090,12:543657,13:547686,14:525316,15:341539,16:645377,17:340647


chrom: chr4
strand: +
right_annotated: ENSG00000270090.5:RP11-529E10.7:lincRNA:933
samples:
,2:200,3:331,4:531,5:934,6:249,7:1056,8:262,9:333,10:408,11:671,12:340,13:979,14:100,15:546,16:233,17:523


chrom: chr4
strand: -
right_annotated: ENSG00000250986.1:AC141928.1:lincRNA:4525
samples:
,0:102,1:902,2:162576,3:68474,4:46769,5:120845,6:59436,7:64324,8:98724,9:94263,10:143149,11:44376,12:48021,13:76250,14:35035,15:28762,16:66570,17:58355


chrom: chr4
strand: +
right_annotated: ENSG00000184160.7:ADRA2C:protein_coding:2179
samples:
,0:1117,1:4088,2:117821,3:24216,4:49037,5:42321,6:40474,7:17468,8:47325,9:29244,10:57639,11:19331,12:29153,13:40198,14:12315,15:10276,16:35914,17:31835


chrom: chr4
strand: -
right_annotated: ENSG00000253917.4:AC226119.5:processed_transcript:682
samples:
,0:422,1:372,2:3102,3:3224,4:547,5:3117,6:1475,7:1529,8:2373,9:2533,10:3721,11:2182,12:1118,13:1743,14:578,15:755,16:2708,17:1525


chrom: chr4
strand: +
right_annotated: ENSG00000251271.3:ALG1L7P:unprocessed_pseudogene:768
samples:
,0:22,1:134,2:1091,3:1649,4:716,5:2844,6:820,7:1620,8:1289,9:1270,10:1860,11:1098,12:909,13:1320,14:724,15:603,16:920,17:1464


chrom: chr4
strand: -
right_annotated: ENSG00000251669.5:FAM86EP:transcribed_unprocessed_pseudogene:3476
samples:
,0:4175,1:3338,2:20858,3:20692,4:7786,5:27246,6:9154,7:13379,8:18500,9:17637,10:32643,11:17573,12:12264,13:14191,14:10865,15:9484,16:14326,17:10349


chrom: chr4
strand: -
right_annotated: ENSG00000250476.1:ENPP7P9:processed_pseudogene:627
samples:
,2:472,3:574,4:344,5:202,6:200,7:191,8:895,9:778,10:1335,11:453,12:548,13:1188,14:967,15:1145,16:3334,17:542


chrom: chr4
strand: -
right_annotated: ENSG00000243894.1:RP11-489M13.1:processed_pseudogene:781
samples:
,0:305,1:437,2:309,3:110,4:239,5:678,6:109,7:249,8:167,10:828,11:603,12:847,13:373,14:178,15:713,16:884,17:1245


chrom: chr4
strand: -
right_annotated: ENSG00000132406.11:TMEM128:protein_coding:1737
samples:
,0:18911,1:5546,2:165390,3:209211,4:137322,5:247209,6:245140,7:193320,8:211755,9:139176,10:254519,11:187305,12:170477,13:195376,14:194576,15:99676,16:185551,17:106134


chrom: chr4
strand: -
right_annotated: ENSG00000145220.13:LYAR:protein_coding:2319
samples:
,0:25316,1:19894,2:135194,3:155528,4:132734,5:204985,6:114013,7:150124,8:150115,9:123367,10:203505,11:117427,12:170920,13:129918,14:148488,15:89867,16:140870,17:60679


chrom: chr4
strand: +
right_annotated: ENSG00000168826.15:ZBTB49:protein_coding:2889
samples:
,0:4136,1:1826,2:154372,3:183912,4:130542,5:288864,6:202137,7:201456,8:205876,9:135147,10:202632,11:152723,12:192010,13:178677,14:214730,15:119140,16:197485,17:76261


chrom: chr4
strand: +
right_annotated: ENSG00000248516.1:RP11-265O12.1:lincRNA:1416
samples:
,0:48,2:457,3:326,4:51,5:50,6:80,7:284,8:723,9:202,10:1155,11:1304,12:2132,13:615,14:1155,15:1730,16:1968,17:999


chrom: chr4
strand: +
right_annotated: ENSG00000168824.14:NSG1:protein_coding:4355
samples:
,0:486,1:98,2:3946036,3:4540081,4:4104498,5:6815420,6:5801867,7:5457685,8:5623262,9:4532405,10:3793281,11:2804807,12:4007875,13:3001957,14:4172955,15:2186494,16:3861759,17:2306527


chrom: chr4
strand: -
right_annotated: ENSG00000168818.9:STX18:protein_coding:5332
samples:
,0:36589,1:16340,2:482146,3:498840,4:324669,5:591836,6:403801,7:450744,8:447406,9:253088,10:666900,11:429261,12:513882,13:447281,14:480984,15:337582,16:501695,17:198885


chrom: chr4
strand: +
right_annotated: ENSG00000237170.3:RPS7P15:processed_pseudogene:584
samples:
,0:40,1:293,2:577,3:352,5:649,6:612,7:646,8:532,9:101,10:6784,11:9575,12:5458,13:4293,14:3422,15:5044,16:3286,17:1794


chrom: chr4
strand: +
right_annotated: ENSG00000247708.7:STX18-AS1:antisense:6107
samples:
,0:948,1:204,2:47693,3:45239,4:51207,5:78076,6:48233,7:56649,8:56937,9:44656,10:120977,11:139697,12:75314,13:99624,14:89378,15:85552,16:93692,17:44702


chrom: chr4
strand: +
right_annotated: ENSG00000280310.1:RP11-326I19.2:TEC:1048
samples:
,2:8473,3:15029,4:7256,5:13746,6:10039,7:10959,8:12383,9:8854,10:11739,11:13077,12:4809,13:9916,14:6483,15:6562,16:8255,17:3464


chrom: chr4
strand: +
right_annotated: ENSG00000273396.1:LINC01396:lincRNA:527
samples:
,2:723,3:1336,4:253,5:870,6:605,7:1025,8:993,9:701,10:1451,11:2373,12:966,13:1144,14:1708,15:1957,16:760,17:617


chrom: chr4
strand: +
right_annotated: ENSG00000163132.6:MSX1:protein_coding:2120
samples:
,0:6835,1:1688,2:11633,3:9162,4:10769,5:8596,6:10476,7:8451,8:28418,9:3430,10:6031,11:3871,12:5033,13:5293,14:6406,15:6220,16:15248,17:3481


chrom: chr4
strand: -
right_annotated: ENSG00000170891.10:CYTL1:protein_coding:1003
samples:
,2:4740,3:5566,4:2800,5:3133,6:3119,7:2497,8:3478,9:2518,10:8394,11:3777,12:1894,13:2517,14:1834,15:1684,16:2649,17:746


chrom: chr4
strand: +
right_annotated: ENSG00000152953.12:STK32B:protein_coding:5324
samples:
,0:1803,1:12343,2:191348,3:394766,4:1285622,5:219678,6:1986034,7:542407,8:639192,9:1843624,10:191828,11:254012,12:1101406,13:121967,14:1343428,15:280056,16:439439,17:864398


chrom: chr4
strand: -
right_annotated: ENSG00000201496.1:RN7SKP275:misc_RNA:301
samples:
,0:90,1:153,2:2631,3:4526,4:13212,5:2434,6:13873,7:5011,8:7277,9:13942,10:7685,11:5004,12:12651,13:1660,14:10009,15:2862,16:6879,17:9280


chrom: chr4
strand: +
right_annotated: ENSG00000082929.8:LINC01587:processed_transcript:1164
samples:
,0:102,2:358,3:412,4:3494,5:1111,6:3633,7:1611,8:1264,9:1489,10:2287,11:2133,12:3642,13:310,14:3746,15:1196,16:513,17:923


chrom: chr4
strand: -
right_annotated: ENSG00000173040.12:EVC2:protein_coding:5509
samples:
,0:12711,1:4373,2:77061,3:57858,4:55940,5:54083,6:43050,7:30866,8:35014,9:18744,10:180901,11:74570,12:84938,13:46779,14:44647,15:35862,16:41923,17:27259


chrom: chr4
strand: +
right_annotated: ENSG00000072840.12:EVC:protein_coding:7148
samples:
,0:31568,1:10550,2:415584,3:249513,4:285454,5:318378,6:250450,7:266637,8:230777,9:252325,10:429003,11:273447,12:227686,13:187404,14:199270,15:251380,16:164011,17:135324


chrom: chr4
strand: -
right_annotated: ENSG00000072832.14:CRMP1:protein_coding:5823
samples:
,0:3614,1:1767,2:16636307,3:15123757,4:15869719,5:29594413,6:29824398,7:26221243,8:33362081,9:24334561,10:11685336,11:8229085,12:11380011,13:9507274,14:15053809,15:9085793,16:16212743,17:11259058


chrom: chr4
strand: -
right_annotated: ENSG00000181215.13:C4orf50:protein_coding:7675
samples:
,2:54654,3:72544,4:73457,5:152657,6:256572,7:280001,8:325439,9:322695,10:82832,11:101535,12:107528,13:116508,14:292466,15:323262,16:404056,17:296583


chrom: chr4
strand: -
right_annotated: ENSG00000152969.17:JAKMIP1:protein_coding:3812
samples:
,1:5,2:287532,3:298187,4:387775,5:477203,6:915858,7:714837,8:1185369,9:870096,10:326225,11:258406,12:489242,13:436599,14:851189,15:594805,16:1146189,17:740589


chrom: chr4
strand: +
right_annotated: ENSG00000249896.2:RP11-586D19.1:transcribed_unprocessed_pseudogene:5643
samples:
,2:23218,3:42124,4:39127,5:45543,6:160169,7:113830,8:194861,9:264085,10:28384,11:24327,12:37886,13:25683,14:122296,15:60261,16:134059,17:158253


chrom: chr4
strand: +
right_annotated: ENSG00000251408.1:RP11-586D19.2:lincRNA:4121
samples:
,3:202,4:1000,5:182,6:946,7:571,8:1017,9:1367,10:2462,11:5801,12:3435,13:3211,14:6339,15:4829,16:17382,17:14064


chrom: chr4
strand: +
right_annotated: ENSG00000109501.13:WFS1:protein_coding:4513
samples:
,0:36458,1:9139,2:436116,3:169979,4:184855,5:246098,6:296715,7:154098,8:333647,9:160062,10:189656,11:105549,12:82914,13:71243,14:94171,15:77906,16:131239,17:114311


chrom: chr4
strand: -
right_annotated: ENSG00000074211.13:PPP2R2C:protein_coding:9198
samples:
,0:204,1:15400,2:246695,3:390535,4:550869,5:738032,6:1864821,7:1713473,8:2810044,9:3437846,10:222184,11:189660,12:453453,13:351303,14:1190498,15:857697,16:1536679,17:1673836


chrom: chr4
strand: +
right_annotated: ENSG00000013288.8:MAN2B2:protein_coding:8898
samples:
,0:53884,1:8880,2:685831,3:484897,4:412733,5:712757,6:722506,7:652515,8:921272,9:547849,10:474108,11:283164,12:335955,13:331429,14:410069,15:382780,16:547410,17:379974


chrom: chr4
strand: +
right_annotated: ENSG00000179010.14:MRFAP1:protein_coding:2655
samples:
,0:223036,1:129924,2:2503667,3:2860701,4:2067171,5:3665537,6:3626042,7:2936722,8:3390961,9:2196198,10:2425513,11:1522961,12:2372123,13:1721399,14:2507473,15:1243259,16:2263639,17:1083937


chrom: chr4
strand: -
right_annotated: ENSG00000251580.1:RP11-539L10.3:lincRNA:422
samples:
,0:998,1:412,2:15943,3:26020,4:7245,5:27854,6:6674,7:22437,8:23985,9:11610,10:34982,11:27020,12:15784,13:30455,14:11503,15:14490,16:32457,17:8545


chrom: chr4
strand: +
right_annotated: ENSG00000170846.16:AC093323.3:lincRNA:2597
samples:
,0:13873,1:10742,2:256297,3:278478,4:264440,5:312282,6:285574,7:314252,8:321684,9:296085,10:360588,11:196805,12:305352,13:230115,14:302433,15:159687,16:303728,17:173924


chrom: chr4
strand: -
right_annotated: ENSG00000246526.2:RP11-539L10.2:lincRNA:1821
samples:
,0:102,2:2707,3:7101,4:4150,5:5471,6:4195,7:6746,8:5857,9:6297,10:7849,11:7080,12:8489,13:7282,14:6142,15:8444,16:10182,17:5944


chrom: chr4
strand: -
right_annotated: ENSG00000279859.2:RP11-539L10.4:TEC:976
samples:
,2:638,3:1012,4:300,5:846,6:1294,7:682,9:2953,10:1104,11:3133,12:4031,13:3422,14:1770,15:2639,16:4345,17:1950


chrom: chr4
strand: +
right_annotated: ENSG00000163993.6:S100P:protein_coding:1280
samples:
,0:219,1:12181,2:1340,3:3795,4:1766,5:3174,6:2448,7:2893,8:2178,9:3097,10:4026,11:6220,12:7254,13:6325,14:5793,15:3337,16:8763,17:3681


chrom: chr4
strand: -
right_annotated: ENSG00000282742.1:RP11-539L10.5:TEC:949
samples:
,0:21,1:51,3:894,4:242,5:145,6:300,7:645,8:98,9:404,10:3847,11:2803,12:4791,13:4006,14:3766,15:2359,16:5682,17:2351


chrom: chr4
strand: -
right_annotated: ENSG00000178988.10:MRFAP1L1:protein_coding:2180
samples:
,0:70717,1:28729,2:1475236,3:2014230,4:1474852,5:2806463,6:2140253,7:2253329,8:2166489,9:1727142,10:2070759,11:1256544,12:1889902,13:1520601,14:1949113,15:942262,16:1851784,17:759029


chrom: chr4
strand: +
right_annotated: ENSG00000186222.4:BLOC1S4:protein_coding:1617
samples:
,0:15474,1:7622,2:137091,3:104691,4:146260,5:122903,6:170220,7:100193,8:137876,9:57555,10:131249,11:72198,12:99665,13:92993,14:82352,15:48249,16:96989,17:47786


chrom: chr4
strand: +
right_annotated: ENSG00000170871.11:KIAA0232:protein_coding:8499
samples:
,0:58039,1:25543,2:1472311,3:2200173,4:1561773,5:2974306,6:1823918,7:2049858,8:1942338,9:1718935,10:2795370,11:2228237,12:2582976,13:2184894,14:2811885,15:1506478,16:2491775,17:1109772


chrom: chr4
strand: +
right_annotated: ENSG00000132405.18:TBC1D14:protein_coding:6241
samples:
,0:77676,1:77031,2:3319522,3:3767110,4:2986102,5:5111545,6:5031695,7:4358241,8:5008892,9:3693949,10:4655703,11:3141600,12:3917046,13:3438045,14:4219246,15:2294602,16:4378351,17:2139546


chrom: chr4
strand: +
right_annotated: ENSG00000187904.3:AC097382.5:sense_overlapping:591
samples:
,0:51,1:102,2:1025,3:805,4:426,5:1003,6:434,7:928,8:102,9:656,10:3560,11:4099,12:2154,13:2632,14:2088,15:3019,16:2686,17:1095


chrom: chr4
strand: +
right_annotated: ENSG00000202392.1:RN7SKP292:misc_RNA:317
samples:
,0:326,1:158,2:383,3:341,4:223,5:955,6:509,7:1354,8:200,9:284,10:6541,11:6544,12:6598,13:6091,14:5818,15:4788,16:7530,17:2829


chrom: chr4
strand: -
right_annotated: ENSG00000245748.1:RP11-367J11.2:antisense:4300
samples:
,0:43302,1:38650,2:2020270,3:2472613,4:1720868,5:3088060,6:3170885,7:2761356,8:3023366,9:2273009,10:2517509,11:1733492,12:1939498,13:1754376,14:2026225,15:1146331,16:2362478,17:1144295


chrom: chr4
strand: -
right_annotated: ENSG00000173013.5:CCDC96:protein_coding:2091
samples:
,0:1008,1:203,2:77010,3:49624,4:39751,5:33102,6:37267,7:13506,8:19099,9:25749,10:53830,11:27739,12:31529,13:19436,14:23136,15:9985,16:14911,17:14052


chrom: chr4
strand: +
right_annotated: ENSG00000173011.11:TADA2B:protein_coding:5776
samples:
,0:24208,1:14127,2:482128,3:442850,4:369929,5:596594,6:545681,7:462405,8:483857,9:409710,10:474947,11:330794,12:435489,13:391906,14:466599,15:286325,16:458704,17:285012


chrom: chr4
strand: -
right_annotated: ENSG00000109519.12:GRPEL1:protein_coding:4177
samples:
,0:55646,1:44490,2:205179,3:368485,4:228486,5:509093,6:306226,7:397646,8:342694,9:382363,10:398084,11:269019,12:365848,13:286392,14:350584,15:194428,16:373956,17:180168


chrom: chr4
strand: -
right_annotated: ENSG00000245468.3:RP11-367J11.3:lincRNA:3763
samples:
,0:507,1:295,2:689,3:1451,4:500,5:1294,6:592,7:1161,8:511,9:1306,10:2961,11:3438,12:2834,13:1815,14:2687,15:3433,16:3593,17:2436


chrom: chr4
strand: +
right_annotated: ENSG00000184985.16:SORCS2:protein_coding:6317
samples:
,0:408,1:1492,2:187096,3:191415,4:369483,5:306014,6:770934,7:293695,8:460029,9:720655,10:106822,11:100446,12:225929,13:94867,14:276983,15:153705,16:198159,17:367211


chrom: chr4
strand: +
right_annotated: ENSG00000272620.1:AFAP1-AS1:antisense:6795
samples:
,0:24890,1:8619,2:183859,3:161411,4:227906,5:274357,6:274493,7:173275,8:240219,9:147486,10:240276,11:225795,12:303187,13:170977,14:321142,15:268756,16:231586,17:130719


chrom: chr4
strand: -
right_annotated: ENSG00000196526.10:AFAP1:protein_coding:10036
samples:
,0:174826,1:60523,2:2479774,3:2590720,4:2793454,5:3738611,6:3564854,7:2747191,8:3548393,9:2579159,10:1982181,11:1906790,12:2365811,13:1348100,14:2649089,15:1838720,16:2150702,17:1415015


chrom: chr4
strand: +
right_annotated: ENSG00000228919.5:AC097381.1:lincRNA:1296
samples:
,0:4544,1:483,2:38502,3:1297,4:39442,5:6827,6:30330,7:1331,8:17040,9:1902,10:7888,11:8638,12:12445,13:21094,14:10603,15:17945,16:16519,17:20531


chrom: chr4
strand: -
right_annotated: ENSG00000163995.19:ABLIM2:protein_coding:6049
samples:
,0:6,1:651,2:135474,3:134994,4:91907,5:191105,6:173411,7:207124,8:315070,9:334488,10:121956,11:88156,12:83654,13:121439,14:115429,15:149376,16:210622,17:222389


chrom: chr4
strand: +
right_annotated: ENSG00000273267.1:RP11-338K13.1:antisense:462
samples:
,2:1583,3:2298,4:2422,5:3130,6:2279,7:4673,8:3146,9:4198,10:3650,11:3779,12:1215,13:3285,14:2283,15:7855,16:6294,17:8821


chrom: chr4
strand: +
right_annotated: ENSG00000250471.2:GMPSP1:processed_pseudogene:579
samples:
,0:7164,1:6740,2:20473,3:31377,4:18333,5:40953,6:19883,7:31500,8:24255,9:18015,10:72645,11:44001,12:65816,13:58182,14:58484,15:34427,16:51731,17:25538


chrom: chr4
strand: +
right_annotated: ENSG00000125089.16:SH3TC1:protein_coding:10593
samples:
,0:1890,1:11501,2:22483,3:8205,4:7581,5:22239,6:22704,7:20649,8:27730,9:5989,10:15374,11:6744,12:7653,13:14358,14:9015,15:10594,16:20190,17:4349


chrom: chr4
strand: +
right_annotated: ENSG00000170801.9:HTRA3:protein_coding:3321
samples:
,0:2382,1:1954,2:14670,3:13812,4:10209,5:19025,6:17380,7:17133,8:44024,9:22730,10:8453,11:4997,12:5125,13:9079,14:5762,15:8158,16:12972,17:8108


chrom: chr4
strand: -
right_annotated: ENSG00000251615.3:RP11-774O3.3:lincRNA:3249
samples:
,0:1116,1:51,2:122218,3:210720,4:101582,5:208750,6:141495,7:224101,8:189611,9:159366,10:127712,11:108690,12:86458,13:81842,14:103671,15:115989,16:118174,17:78439


chrom: chr4
strand: -
right_annotated: ENSG00000087008.15:ACOX3:protein_coding:3846
samples:
,0:26272,1:9111,2:212352,3:193653,4:143519,5:315060,6:270353,7:215577,8:215542,9:187780,10:365643,11:286557,12:196954,13:256529,14:261936,15:214343,16:287488,17:195494


chrom: chr4
strand: +
right_annotated: ENSG00000155275.18:TRMT44:protein_coding:7724
samples:
,0:11920,1:5875,2:275888,3:245555,4:225478,5:414834,6:344438,7:320787,8:363141,9:225419,10:334746,11:324593,12:311211,13:326154,14:325799,15:340357,16:340022,17:233340


chrom: chr4
strand: -
right_annotated: ENSG00000251186.1:RP11-689P11.3:antisense:664
samples:
,0:644,1:270,2:5164,3:7315,4:4835,5:17042,6:8262,7:13190,8:11818,9:9270,10:17100,11:12610,12:15475,13:16505,14:17601,15:12293,16:16868,17:9778


chrom: chr4
strand: +
right_annotated: ENSG00000205959.3:RP11-689P11.2:lincRNA:3374
samples:
,0:151,1:46,2:63851,3:82202,4:39486,5:99916,6:83615,7:136734,8:115569,9:69123,10:42023,11:32192,12:26672,13:40983,14:40643,15:50945,16:54083,17:38952


chrom: chr4
strand: +
right_annotated: ENSG00000155269.11:GPR78:protein_coding:8362
samples:
,0:4081,1:96,2:1293,3:3467,4:577,5:1603,6:800,7:1667,8:12649,9:1671,10:365,11:3403,12:94,13:403,14:189,15:1292,16:5371,17:1137


chrom: chr4
strand: +
right_annotated: ENSG00000109625.18:CPZ:protein_coding:3447
samples:
,0:4487,1:96,2:632,3:2992,4:177,5:807,6:600,7:1204,8:11718,9:624,10:288,11:3459,12:94,13:167,15:477,16:5235,17:726


chrom: chr4
strand: -
right_annotated: ENSG00000215612.7:HMX1:protein_coding:2144
samples:
,1:50,2:6968,3:2747,4:13406,5:1802,6:6564,7:1165,8:3775,9:202,10:3091,11:2579,12:2451,13:2415,14:1568,15:1233,16:1999,17:541


chrom: chr4
strand: +
right_annotated: ENSG00000249272.1:UNC93B8:unprocessed_pseudogene:705
samples:
,0:204,1:194,2:759,3:267,4:190,5:743,6:599,7:262,8:399,9:96,10:457,11:90,13:99,14:100,15:450,16:482,17:101


chrom: chr4
strand: +
right_annotated: ENSG00000249347.1:RP11-747H12.4:processed_pseudogene:352
samples:
,0:51,1:102,2:200,3:283,4:396,5:100,6:781,7:399,9:299,10:100,12:100,13:101,14:789,15:674,16:299,17:303


chrom: chr4
strand: +
right_annotated: ENSG00000251313.1:RP11-747H12.5:processed_pseudogene:781
samples:
,0:30,2:754,3:642,4:98,5:332,6:92,7:81,8:388,10:4453,11:2387,12:153,13:195,14:791,15:179,16:620,17:829


chrom: chr4
strand: +
right_annotated: ENSG00000249767.1:ENPP7P10:unprocessed_pseudogene:933
samples:
,0:102,2:1954,3:4881,4:2268,5:5639,6:4502,7:11899,8:5481,9:5315,10:25690,11:30477,12:16028,13:11392,14:16484,15:25162,16:21978,17:11698


chrom: chr4
strand: +
right_annotated: ENSG00000163612.10:FAM86KP:unprocessed_pseudogene:987
samples:
,0:722,1:316,2:2631,3:1210,4:1954,5:3631,6:2898,7:2186,8:1805,9:1668,10:2136,11:1393,12:1835,13:3918,14:1748,15:2586,16:2447,17:1973


chrom: chr4
strand: -
right_annotated: ENSG00000250268.3:ALG1L14P:unprocessed_pseudogene:434
samples:
,2:28,3:1211,4:74,5:548,6:816,7:947,8:32,9:1913,10:208,11:1418,12:91,13:510,14:1356,15:573,16:89,17:1268


chrom: chr4
strand: +
right_annotated: ENSG00000229924.3:FAM90A26:protein_coding:2492
samples:
,2:2036,3:2518,4:1636,5:2167,6:3032,7:2931,8:1309,9:2769,10:5788,11:2346,12:3417,13:2926,14:4484,15:4201,16:2497,17:2865


chrom: chr4
strand: +
right_annotated: ENSG00000249482.1:USP17L14P:unprocessed_pseudogene:1593
samples:
,0:51,3:303,5:101,6:400,8:186,9:101,10:15135,11:7611,12:1879,13:1271,14:3453,15:2295,16:2610,17:4530


chrom: chr4
strand: +
right_annotated: ENSG00000223569.6:USP17L15:protein_coding:1680
samples:
,2:103,4:100,5:202,6:100,8:197,9:96,10:50253,11:23165,12:4559,13:3789,14:11231,15:7727,16:10495,17:13199


chrom: chr4
strand: +
right_annotated: ENSG00000250844.2:USP17L18:protein_coding:1680
samples:
,2:400,3:85,4:100,6:200,7:322,8:180,9:302,10:62788,11:34438,12:6514,13:3970,14:10482,15:8053,16:9161,17:12183


chrom: chr4
strand: +
right_annotated: ENSG00000250745.2:USP17L20:protein_coding:1680
samples:
,2:400,3:396,4:100,5:101,6:436,7:303,9:271,10:54122,11:23499,12:6299,13:3478,14:12385,15:7435,16:8616,17:14767


chrom: chr4
strand: +
right_annotated: ENSG00000251694.1:USP17L9P:unprocessed_pseudogene:1593
samples:
,1:51,2:200,3:202,4:100,5:101,8:100,9:101,10:31915,11:16493,12:4220,13:2124,14:7625,15:4747,16:5698,17:7554


chrom: chr4
strand: -
right_annotated: ENSG00000242034.1:RP11-1396O13.1:processed_pseudogene:372
samples:
,2:455,3:1535,4:529,5:1547,6:1136,7:2145,8:1026,9:504,10:971,11:1206,12:1256,13:404,14:829,15:287,16:966,17:44


chrom: chr4
strand: +
right_annotated: ENSG00000244004.1:RP11-1396O13.2:processed_pseudogene:780
samples:
,2:1417,3:819,4:64,5:561,6:576,7:216,8:868,9:493,10:1641,11:2446,12:1399,13:1372,14:538,15:2180,16:1538,17:792


chrom: chr4
strand: -
right_annotated: ENSG00000249799.1:SNRPCP13:processed_pseudogene:190
samples:
,0:75,2:1269,3:729,4:500,5:1207,6:502,7:305,8:351,9:246,10:972,11:1432,13:1348,14:650,15:1657,16:613,17:300


chrom: chr4
strand: +
right_annotated: ENSG00000250942.1:ENPP7P11:processed_pseudogene:627
samples:
,0:102,2:4116,3:6980,4:1589,5:3072,6:852,7:2632,8:2146,10:10956,11:9220,12:3932,13:4687,14:2445,15:7904,16:2971,17:2016


chrom: chr4
strand: -
right_annotated: ENSG00000203436.2:Metazoa_SRP:misc_RNA:281
samples:
,0:51,2:831,3:379,4:394,5:797,6:572,7:180,8:525,9:201,10:281,11:160,12:182,13:260,14:258,15:167,16:472,17:627


chrom: chr4
strand: -
right_annotated: ENSG00000109667.11:SLC2A9:protein_coding:6614
samples:
,0:1964,1:612,2:13080,3:7559,4:6918,5:19084,6:23631,7:16069,8:39069,9:23263,10:17295,11:16655,12:15510,13:12118,14:26052,15:22502,16:36831,17:19538


chrom: chr4
strand: +
right_annotated: ENSG00000169676.5:DRD5:protein_coding:2330
samples:
,2:2567,3:396,4:800,5:3793,6:4395,7:6244,8:17040,9:12487,11:404,12:598,13:3187,14:2973,15:3146,16:15174,17:6157


chrom: chr4
strand: -
right_annotated: ENSG00000261490.1:RP11-448G15.3:sense_overlapping:3510
samples:
,0:2988,1:903,2:52964,3:72209,4:35893,5:74497,6:66965,7:85520,8:66093,9:35388,10:79722,11:69997,12:54939,13:53796,14:68487,15:61446,16:49942,17:26729


chrom: chr4
strand: -
right_annotated: ENSG00000071127.16:WDR1:protein_coding:7827
samples:
,0:1093770,1:252287,2:2009269,3:1334919,4:1576261,5:2448519,6:3335889,7:1964146,8:3041736,9:1638082,10:1548943,11:1009571,12:1612724,13:1497816,14:1997746,15:973429,16:2093020,17:984035


chrom: chr4
strand: -
right_annotated: ENSG00000264931.1:MIR3138:miRNA:82
samples:
,0:113,1:67,2:328,3:172,4:68,5:328,6:531,7:467,8:211,10:1216,11:571,12:608,13:920,14:417,15:309,16:154,17:416


chrom: chr4
strand: -
right_annotated: ENSG00000223086.1:RNA5SP155:rRNA:129
samples:
,1:7,2:515,3:175,4:173,5:1009,6:515,7:263,8:576,10:3075,11:2665,12:2262,13:5249,14:3133,15:4626,16:3860,17:1429


chrom: chr4
strand: -
right_annotated: ENSG00000178163.7:ZNF518B:protein_coding:10905
samples:
,0:60117,1:16267,2:637691,3:1119559,4:724569,5:1592802,6:878820,7:1259512,8:1046954,9:956123,10:2748557,11:2116133,12:2504960,13:2034227,14:2564559,15:1465091,16:2559963,17:974738


chrom: chr4
strand: +
right_annotated: ENSG00000250896.1:RNPS1P1:processed_pseudogene:918
samples:
,0:6567,1:11047,2:234097,3:163647,4:182019,5:234142,6:276560,7:156143,8:273469,9:134419,10:132981,11:72143,12:123633,13:110888,14:138989,15:86520,16:137795,17:77843


chrom: chr4
strand: -
right_annotated: ENSG00000002587.9:HS3ST1:protein_coding:8166
samples:
,0:68,1:783,2:237282,3:224023,4:394470,5:529880,6:607138,7:461890,8:441454,9:58227,10:129611,11:268002,12:520285,13:424009,14:587230,15:419015,16:475611,17:59420


chrom: chr4
strand: +
right_annotated: ENSG00000251152.1:RP11-281P23.1:lincRNA:4019
samples:
,2:400,3:202,4:1000,5:804,6:1000,7:2003,8:600,10:800,11:1476,12:386,13:1958,14:1606,15:1924,16:2135,17:504


chrom: chr4
strand: +
right_annotated: ENSG00000249995.1:ECM1P2:processed_pseudogene:1577
samples:
,2:235,3:34,4:225,5:46,6:122,7:186,8:103,10:4480,11:5230,12:1843,13:1773,14:1467,15:1316,16:1140,17:535


chrom: chr4
strand: -
right_annotated: ENSG00000249780.1:RP11-352E6.2:processed_pseudogene:340
samples:
,2:1674,3:785,4:1927,5:1351,6:4925,7:332,8:2956,9:799,10:1632,11:2396,12:1777,13:944,14:2034,15:1050,16:1556,17:1489


chrom: chr4
strand: -
right_annotated: ENSG00000250371.1:RP11-22A3.2:lincRNA:2694
samples:
,2:1000,3:1355,4:1597,5:202,6:400,7:735,8:1200,9:403,10:22888,11:31025,12:15518,13:9956,14:12020,15:12929,16:15084,17:6892


chrom: chr4
strand: +
right_annotated: ENSG00000205940.8:HSP90AB2P:transcribed_processed_pseudogene:2299
samples:
,0:7965,1:13420,2:2206,3:8233,4:3291,5:11904,6:4386,7:10221,8:6306,9:10522,10:21756,11:33384,12:17731,13:21385,14:15444,15:23749,16:15958,17:13340


chrom: chr4
strand: -
right_annotated: ENSG00000157869.14:RAB28:protein_coding:2221
samples:
,0:22066,1:8165,2:209998,3:242286,4:182733,5:317357,6:152898,7:244843,8:201876,9:138046,10:416766,11:295347,12:245931,13:235697,14:206699,15:164526,16:232352,17:79951


chrom: chr4
strand: -
right_annotated: ENSG00000109705.7:NKX3-2:protein_coding:2801
samples:
,0:102,1:319,2:3300,3:1414,4:3997,5:4366,6:2420,7:2075,8:1200,9:808,10:1200,11:1414,12:1197,13:1851,14:400,15:182,16:786,17:202


chrom: chr4
strand: -
right_annotated: ENSG00000038219.12:BOD1L1:protein_coding:15860
samples:
,0:68741,1:41119,2:1709009,3:2063831,4:2068059,5:3447420,6:1964462,7:1991043,8:2020034,9:1883955,10:4550113,11:3499946,12:4929489,13:3960251,14:4876883,15:2876801,16:4170841,17:1841597


chrom: chr4
strand: +
right_annotated: ENSG00000281620.1:AC006445.1:protein_coding:120
samples:
,0:355,1:35,2:7785,3:204,4:11468,5:514,6:4713,7:50,8:2311,9:69,10:1353,11:572,12:3251,13:4740,14:2513,15:1511,16:3556,17:3236


chrom: chr4
strand: -
right_annotated: ENSG00000249148.2:AC006445.7:processed_pseudogene:472
samples:
,0:60,2:343,3:251,4:25,6:400,7:302,8:647,9:284,10:805,11:711,12:225,13:599,14:1480,15:247,16:689,17:865


chrom: chr4
strand: +
right_annotated: ENSG00000250634.5:LINC01182:lincRNA:2742
samples:
,0:2,1:193,2:71,3:374,4:238,5:252,6:574,7:101,9:26,10:880,11:2624,12:1452,13:283,14:628,15:213,16:1055,17:202


chrom: chr4
strand: +
right_annotated: ENSG00000248698.5:LINC01085:lincRNA:2342
samples:
,0:35990,1:204,2:572,3:2774,4:2821,5:1581,6:643,7:404,8:402,10:626,11:2980,12:2449,13:266,14:378,15:643,16:947,17:316


chrom: chr4
strand: -
right_annotated: ENSG00000248360.7:LINC00504:lincRNA:5095
samples:
,0:49,2:1747,3:6060,4:5344,5:7816,6:6495,7:10465,8:10863,9:25414,10:11608,11:13156,12:9876,13:10191,14:18830,15:12940,16:16648,17:18962


chrom: chr4
strand: -
right_annotated: ENSG00000247624.6:CPEB2-AS1:lincRNA:3089
samples:
,0:332,1:50,2:1958,3:3471,4:2158,5:3171,6:2830,7:5543,8:2634,9:3267,10:14626,11:31352,12:21479,13:17996,14:19080,15:32158,16:35552,17:30108


chrom: chr4
strand: +
right_annotated: ENSG00000137449.15:CPEB2:protein_coding:7177
samples:
,0:13439,1:10844,2:282201,3:440008,4:428376,5:681001,6:321159,7:481694,8:380983,9:432054,10:432427,11:692382,12:605498,13:675996,14:599576,15:557748,16:591724,17:489761


chrom: chr4
strand: -
right_annotated: ENSG00000249252.5:RP11-665G4.1:antisense:907
samples:
,0:1083,1:599,2:11867,3:12837,4:12886,5:26806,6:15440,7:19497,8:18984,9:15795,10:27398,11:29811,12:29991,13:29513,14:31596,15:21444,16:32919,17:20744


chrom: chr4
strand: +
right_annotated: ENSG00000163145.12:C1QTNF7:protein_coding:5583
samples:
,0:102,2:1468,3:2423,4:605,5:3466,6:1763,7:2560,8:8407,9:4794,10:31743,11:45683,12:22286,13:8777,14:15705,15:24184,16:23714,17:7757


chrom: chr4
strand: -
right_annotated: ENSG00000251379.1:RP11-484O2.1:antisense:871
samples:
,2:200,3:269,4:43,6:200,7:224,8:181,9:112,10:7292,11:6654,12:3813,13:1892,14:2881,15:6188,16:4142,17:1873


chrom: chr4
strand: +
right_annotated: ENSG00000048342.15:CC2D2A:protein_coding:7606
samples:
,0:24933,1:13612,2:456757,3:459629,4:359119,5:812002,6:401591,7:541564,8:531899,9:370014,10:1123032,11:737646,12:804269,13:718556,14:750280,15:624192,16:812174,17:317518


chrom: chr4
strand: -
right_annotated: ENSG00000273133.1:RP11-799M12.2:antisense:556
samples:
,0:129,2:1356,3:990,4:530,5:1567,6:1945,7:3417,8:1367,9:1287,10:13011,11:18902,12:13007,13:7300,14:7322,15:12136,16:11935,17:2499


chrom: chr4
strand: -
right_annotated: ENSG00000118564.14:FBXL5:protein_coding:4573
samples:
,0:108129,1:36771,2:846970,3:1305099,4:805717,5:2118431,6:1168201,7:1380922,8:1217943,9:1151151,10:2620583,11:1882362,12:1928779,13:1925417,14:2209208,15:1101338,16:1967097,17:906548


chrom: chr4
strand: +
right_annotated: ENSG00000237765.6:FAM200B:protein_coding:4817
samples:
,0:23843,1:16237,2:425080,3:697245,4:487221,5:914564,6:487194,7:860414,8:593291,9:591205,10:1173913,11:809832,12:930107,13:816755,14:857075,15:538122,16:897757,17:354275


chrom: chr4
strand: +
right_annotated: ENSG00000109743.10:BST1:protein_coding:2980
samples:
,0:26146,1:9763,2:7560,3:5901,4:5732,5:11208,6:18356,7:11494,8:15668,9:16824,10:8261,11:6660,12:7817,13:7391,14:16388,15:8463,16:14843,17:11547


chrom: chr4
strand: -
right_annotated: ENSG00000214846.4:RP11-115L11.1:processed_pseudogene:666
samples:
,0:1237,1:153,2:400,3:670,4:662,5:702,6:590,7:857,8:416,9:530,10:1045,11:328,12:395,13:474,14:2700,15:347,16:627,17:257


chrom: chr4
strand: +
right_annotated: ENSG00000004468.12:CD38:protein_coding:6855
samples:
,1:9985,2:1400,3:7482,4:5999,5:7313,6:44587,7:22476,8:93299,9:17272,10:3929,11:4946,12:10804,13:4656,14:48039,15:13093,16:80452,17:10289


chrom: chr4
strand: -
right_annotated: ENSG00000137441.7:FGFBP2:protein_coding:1250
samples:
,2:10560,3:11225,4:13763,5:25959,6:33948,7:20420,8:34917,9:62541,10:13579,11:5643,12:14345,13:14260,14:27112,15:10706,16:24335,17:35291


chrom: chr4
strand: -
right_annotated: ENSG00000007062.11:PROM1:protein_coding:7434
samples:
,1:51,2:295200,3:297860,4:480739,5:748000,6:933970,7:610479,8:784876,9:2077903,10:573076,11:274414,12:732233,13:495766,14:1164271,15:419326,16:861219,17:1197601


chrom: chr4
strand: -
right_annotated: ENSG00000169762.16:TAPT1:protein_coding:7828
samples:
,0:19476,1:9098,2:282577,3:504241,4:631816,5:714814,6:701025,7:666839,8:580749,9:994334,10:623979,11:510973,12:990669,13:542619,14:1071472,15:415014,16:668390,17:668014


chrom: chr4
strand: +
right_annotated: ENSG00000249234.1:RP11-452J21.2:antisense:414
samples:
,0:1,1:51,2:357,3:496,4:953,5:1774,6:910,7:1072,8:814,9:2470,10:3566,11:6581,12:8780,13:3265,14:9519,15:6793,16:6453,17:4720


chrom: chr4
strand: +
right_annotated: ENSG00000263327.6:TAPT1-AS1:antisense:2763
samples:
,0:1226,1:890,2:19942,3:36532,4:34619,5:51184,6:27727,7:38747,8:36613,9:16676,10:56144,11:64628,12:52152,13:52815,14:51899,15:56044,16:61234,17:39077


chrom: chr4
strand: -
right_annotated: ENSG00000242358.1:RPS21P4:processed_pseudogene:248
samples:
,0:906,1:627,2:8162,3:21889,4:6812,5:37190,6:13444,7:27198,8:24231,9:7940,10:23010,11:19917,12:12456,13:28178,14:12143,15:11898,16:20016,17:8884


chrom: chr4
strand: -
right_annotated: ENSG00000249506.3:ZEB2P1:transcribed_processed_pseudogene:1938
samples:
,0:102,2:1047,3:730,4:581,5:600,6:1638,7:637,8:1841,9:3284,10:1692,11:2299,12:3082,13:1353,14:2924,15:2036,16:2405,17:3771


chrom: chr4
strand: +
right_annotated: ENSG00000248138.5:RP11-446J8.1:antisense:730
samples:
,0:958,2:71761,3:80864,4:170063,5:112657,6:262049,7:91335,8:180985,9:231385,10:68267,11:60596,12:238271,13:62161,14:255581,15:65407,16:138404,17:103714


chrom: chr4
strand: -
right_annotated: ENSG00000169744.12:LDB2:protein_coding:5586
samples:
,0:18873,2:733478,3:1132030,4:2004648,5:1429070,6:2681967,7:1416499,8:1939113,9:3013027,10:1154362,11:1167913,12:2925243,13:998315,14:3157944,15:941081,16:1960255,17:1670084


chrom: chr4
strand: -
right_annotated: ENSG00000151552.11:QDPR:protein_coding:3059
samples:
,0:11290,1:8269,2:765720,3:854288,4:606726,5:619399,6:796039,7:464109,8:621102,9:450466,10:638370,11:410904,12:480548,13:335121,14:433505,15:217087,16:336040,17:262583


chrom: chr4
strand: +
right_annotated: ENSG00000249581.2:CLRN2:protein_coding:823
samples:
,2:1690,3:5621,4:1504,5:186,6:178,7:1181,8:33,9:404,10:6202,11:5640,12:556,13:87,14:105,16:353,17:248


chrom: chr4
strand: +
right_annotated: ENSG00000002549.12:LAP3:protein_coding:3785
samples:
,0:114504,1:41999,2:229477,3:329695,4:178729,5:356356,6:269818,7:262024,8:299874,9:302238,10:445196,11:246685,12:295018,13:200581,14:299591,15:123540,16:301196,17:146936


chrom: chr4
strand: -
right_annotated: ENSG00000249502.1:AC006160.5:antisense:750
samples:
,0:368,1:342,2:2359,3:1830,4:1679,5:1267,6:1085,7:511,8:2185,9:873,10:10260,11:5028,12:4616,13:3872,14:2999,15:2296,16:4210,17:993


chrom: chr4
strand: +
right_annotated: ENSG00000118579.12:MED28:protein_coding:10982
samples:
,0:55060,1:18394,2:1820022,3:2708403,4:2298631,5:2980273,6:1742508,7:2175663,8:2008030,9:1983179,10:3492531,11:2375370,12:3123659,13:2242244,14:2356362,15:1764981,16:2452565,17:1231614


chrom: chr4
strand: -
right_annotated: ENSG00000047662.4:FAM184B:protein_coding:6622
samples:
,0:4481,1:1652,2:792935,3:1144208,4:1040203,5:1000299,6:687630,7:858118,8:913285,9:881288,10:1447219,11:850005,12:1244700,13:711472,14:820486,15:654789,16:990765,17:520081


chrom: chr4
strand: -
right_annotated: ENSG00000163257.10:DCAF16:protein_coding:4816
samples:
,0:37547,1:10917,2:1056060,3:1327733,4:1046757,5:1489006,6:736797,7:955638,8:819132,9:697376,10:2168130,11:1340007,12:1498615,13:993178,14:1046236,15:720697,16:1076327,17:437344


chrom: chr4
strand: +
right_annotated: ENSG00000109805.9:NCAPG:protein_coding:4921
samples:
,0:132150,1:64414,2:757712,3:1089466,4:558463,5:886977,6:224993,7:401204,8:263541,9:274186,10:2442741,11:1266904,12:1085536,13:740703,14:411208,15:329136,16:401613,17:172017


chrom: chr4
strand: -
right_annotated: ENSG00000178177.15:LCORL:protein_coding:14858
samples:
,0:30760,1:21218,2:968280,3:1358378,4:838312,5:1304444,6:514819,7:856851,8:654495,9:859281,10:5086304,11:4013536,12:2814527,13:2158569,14:1907671,15:1500145,16:2183699,17:1171766


chrom: chr4
strand: +
right_annotated: ENSG00000235413.3:KRT18P63:processed_pseudogene:979
samples:
,0:96,1:242,2:3368,3:5237,4:3265,5:7189,6:4798,7:4281,8:1739,9:2256,10:69591,11:70559,12:29214,13:17708,14:17016,15:15706,16:26560,17:18354


chrom: chr4
strand: +
right_annotated: ENSG00000241612.1:RP13-585F24.1:processed_pseudogene:483
samples:
,0:6114,1:3180,2:1338,3:3384,4:1238,5:2903,6:2033,7:3283,8:2451,9:1011,10:5851,11:2931,12:5417,13:6688,14:5502,15:2419,16:3856,17:1360


chrom: chr4
strand: +
right_annotated: ENSG00000145147.19:SLIT2:protein_coding:9712
samples:
,0:107485,2:86198,3:306423,4:232415,5:340110,6:673395,7:368650,8:452800,9:407849,10:715449,11:334021,12:364457,13:209152,14:769465,15:304922,16:454375,17:332204


chrom: chr4
strand: +
right_annotated: ENSG00000163138.18:PACRGL:protein_coding:4032
samples:
,0:11260,1:8444,2:149473,3:170502,4:129944,5:181118,6:133180,7:133433,8:155099,9:135104,10:465911,11:318333,12:257205,13:250163,14:243977,15:152796,16:248145,17:131523


chrom: chr4
strand: -
right_annotated: ENSG00000185774.14:KCNIP4:protein_coding:4140
samples:
,0:1320,1:661,2:19355,3:48004,4:95321,5:73398,6:92492,7:98372,8:143107,9:136660,10:131391,11:151496,12:215803,13:109742,14:209071,15:133363,16:234266,17:145433


chrom: chr4
strand: +
right_annotated: ENSG00000272995.1:RP11-362J17.1:antisense:565
samples:
,2:800,3:3227,4:1834,5:1255,6:1601,7:1206,8:1939,9:2321,10:4832,11:6125,12:8024,13:2327,14:4430,15:3636,16:6258,17:2105


chrom: chr4
strand: -
right_annotated: ENSG00000280650.1:KCNIP4-IT1:lincRNA:9848
samples:
,3:202,4:584,5:595,6:800,7:695,8:357,10:20681,11:154427,12:435904,13:78644,14:257613,15:204648,16:469214,17:213703


chrom: chr4
strand: +
right_annotated: ENSG00000250039.3:RP11-17E2.2:antisense:1874
samples:
,0:51,1:12,2:583,3:1043,4:1113,5:2405,6:1074,7:949,8:356,10:3759,11:3798,12:1494,13:2534,14:1122,15:2233,16:2533,17:1799


chrom: chr4
strand: -
right_annotated: ENSG00000152990.13:ADGRA3:protein_coding:9250
samples:
,0:34730,1:22464,2:1050152,3:1208079,4:816497,5:1555812,6:739354,7:945680,8:889587,9:433209,10:2048996,11:1408786,12:1532968,13:1339716,14:1108748,15:786247,16:1073423,17:359744


chrom: chr4
strand: +
right_annotated: ENSG00000244538.1:RP11-10G12.1:processed_pseudogene:255
samples:
,0:4047,1:1425,2:465,3:536,4:190,5:201,6:871,7:305,8:1157,9:202,10:1305,11:1008,12:667,13:823,14:443,15:95,16:757,17:98


chrom: chr4
strand: -
right_annotated: ENSG00000237350.1:CDC42P6:processed_pseudogene:576
samples:
,0:88969,1:25019,2:261296,3:392549,4:270989,5:692727,6:385707,7:503869,8:538854,9:520133,10:521210,11:323230,12:474920,13:407060,14:501834,15:232414,16:531595,17:235171


chrom: chr4
strand: -
right_annotated: ENSG00000109819.8:PPARGC1A:protein_coding:10870
samples:
,1:355,2:63708,3:99100,4:81882,5:189003,6:65626,7:115422,8:150763,9:179919,10:79311,11:127808,12:108979,13:135641,14:106326,15:109643,16:190353,17:155481


chrom: chr4
strand: -
right_annotated: ENSG00000109606.12:DHX15:protein_coding:8162
samples:
,0:244526,1:193201,2:1736629,3:2603694,4:1720139,5:3599974,6:1620881,7:2453101,8:2013484,9:1493310,10:4614242,11:3044495,12:3337349,13:3014619,14:2685327,15:1598795,16:2658706,17:1025233


chrom: chr4
strand: -
right_annotated: ENSG00000207697.1:MIR573:miRNA:99
samples:
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chrom: chr4
strand: +
right_annotated: ENSG00000109610.5:SOD3:protein_coding:2128
samples:
,0:917,2:1212,3:964,4:754,5:963,6:2002,7:787,8:1198,9:630,10:200,11:1029,12:1233,13:1776,14:993,15:1792,16:1613,17:1287


chrom: chr4
strand: -
right_annotated: ENSG00000181982.18:CCDC149:protein_coding:9582
samples:
,0:18547,1:1724,2:340273,3:427422,4:344069,5:688758,6:516659,7:652616,8:636697,9:630581,10:249894,11:318525,12:386330,13:402987,14:524773,15:494037,16:582008,17:378485


chrom: chr4
strand: -
right_annotated: ENSG00000153012.11:LGI2:protein_coding:6428
samples:
,0:56,2:42631,3:71264,4:56200,5:120073,6:67185,7:100008,8:124268,9:220767,10:12870,11:54778,12:70515,13:68826,14:74032,15:61846,16:122570,17:127725


chrom: chr4
strand: -
right_annotated: ENSG00000109618.11:SEPSECS:protein_coding:6232
samples:
,0:11878,1:5753,2:135152,3:269634,4:128993,5:269686,6:132104,7:194264,8:148918,9:115448,10:415094,11:293384,12:267559,13:247023,14:242162,15:128414,16:252847,17:76961


chrom: chr4
strand: +
right_annotated: ENSG00000281501.1:SEPSECS-AS1:antisense:4356
samples:
,0:357,2:16943,3:20634,4:17805,5:30193,6:12398,7:18120,8:4568,9:909,10:55954,11:37295,12:32068,13:26381,14:23551,15:31567,16:16146,17:533


chrom: chr4
strand: +
right_annotated: ENSG00000281028.1:RP11-717K11.2:protein_coding:1388
samples:
,0:46001,1:8381,2:34280,3:58022,4:28474,5:87776,6:24731,7:56801,8:38390,9:31337,10:93551,11:65926,12:50667,13:65934,14:49238,15:47864,16:68336,17:19197


chrom: chr4
strand: +
right_annotated: ENSG00000271172.1:RP11-660M5.1:lincRNA:511
samples:
,2:143,3:560,4:230,5:471,6:155,7:272,8:100,9:404,10:664,11:1825,12:700,13:768,14:634,15:2222,16:1520,17:133


chrom: chr4
strand: +
right_annotated: ENSG00000038210.12:PI4K2B:protein_coding:3540
samples:
,0:94369,1:17254,2:51057,3:104989,4:48605,5:133886,6:47888,7:120818,8:64998,9:49637,10:186391,11:138903,12:95012,13:138332,14:84791,15:96564,16:120749,17:43288


chrom: chr4
strand: +
right_annotated: ENSG00000168228.14:ZCCHC4:protein_coding:4400
samples:
,0:15311,1:7295,2:118696,3:198026,4:111895,5:216614,6:108879,7:142420,8:128973,9:109496,10:248627,11:224803,12:195945,13:183679,14:170551,15:131485,16:186286,17:80490


chrom: chr4
strand: +
right_annotated: ENSG00000053900.10:ANAPC4:protein_coding:7494
samples:
,0:38325,1:16948,2:368784,3:759195,4:323062,5:781649,6:390573,7:745107,8:537478,9:514081,10:850902,11:667528,12:569382,13:542616,14:533273,15:461384,16:624629,17:291577


chrom: chr4
strand: +
right_annotated: ENSG00000228154.3:RP11-302F12.2:processed_pseudogene:503
samples:
,0:28,2:631,3:1920,4:858,5:1584,6:668,7:1270,8:186,9:1076,10:2446,11:1166,12:1188,13:866,14:1092,15:1226,16:1188,17:623


chrom: chr4
strand: +
right_annotated: ENSG00000157765.11:SLC34A2:protein_coding:4699
samples:
,2:19193,3:28580,4:11841,5:27569,6:22773,7:25299,8:20989,9:11729,10:15431,11:19308,12:14522,13:17007,14:15720,15:24877,16:19837,17:8579


chrom: chr4
strand: +
right_annotated: ENSG00000242640.1:RP11-302F12.1:processed_pseudogene:171
samples:
,0:51,1:150,2:633,3:1484,4:230,5:489,6:591,7:1965,8:638,9:261,10:1516,11:1650,12:1504,13:363,14:1601,15:2050,16:1472,17:633


chrom: chr4
strand: -
right_annotated: ENSG00000249277.1:RP11-302F12.4:processed_pseudogene:257
samples:
,0:98,1:51,3:748,4:463,5:327,7:413,8:122,9:181,10:76,11:1034,12:592,13:741,14:996,15:1309,16:1242,17:348


chrom: chr4
strand: -
right_annotated: ENSG00000250050.1:MTND4P9:unprocessed_pseudogene:1346
samples:
,2:16481,3:17108,4:13209,5:18583,6:9015,7:14817,8:14956,9:10796,10:15341,11:14461,12:11418,13:11112,14:11301,15:22893,16:12136,17:10350


chrom: chr4
strand: -
right_annotated: ENSG00000248133.1:MTND4LP22:unprocessed_pseudogene:276
samples:
,2:257,3:564,4:325,5:1014,6:307,7:269,8:711,9:240,10:748,11:2414,12:574,13:1579,14:984,15:2358,16:788,17:1153


chrom: chr4
strand: -
right_annotated: ENSG00000251353.1:MTND3P5:unprocessed_pseudogene:333
samples:
,2:1586,3:1254,4:1414,5:2151,6:497,7:1747,8:1237,9:1564,10:1609,11:2636,12:1948,13:1107,14:1861,15:3668,16:1544,17:603


chrom: chr4
strand: -
right_annotated: ENSG00000248654.1:MTCO3P44:unprocessed_pseudogene:541
samples:
,2:369,3:1740,4:1504,5:2229,6:1161,7:1727,8:1746,9:515,10:3557,11:7615,12:2890,13:1386,14:2293,15:6788,16:4134,17:3091


chrom: chr4
strand: -
right_annotated: ENSG00000091490.10:SEL1L3:protein_coding:7489
samples:
,0:78402,1:38797,2:2387074,3:2810051,4:1588882,5:3117451,6:1391189,7:1556612,8:1450779,9:886995,10:3968817,11:2685658,12:2316256,13:2231860,14:1611966,15:1104550,16:1678128,17:663737


chrom: chr4
strand: +
right_annotated: ENSG00000250541.1:RP11-302F12.10:antisense:483
samples:
,2:3192,3:6760,4:2984,5:4580,6:1539,7:3648,8:1340,9:2483,10:12442,11:18554,12:8241,13:8046,14:6706,15:15016,16:7591,17:8768


chrom: chr4
strand: +
right_annotated: ENSG00000250317.8:SMIM20:protein_coding:1612
samples:
,0:20800,1:10616,2:145263,3:135038,4:89073,5:157008,6:126596,7:103499,8:127699,9:50515,10:206973,11:107073,12:124401,13:116432,14:92282,15:53268,16:109232,17:41816


chrom: chr4
strand: -
right_annotated: ENSG00000251009.2:RP13-494C23.1:lincRNA:762
samples:
,0:77,2:2272,3:4371,4:3214,5:2462,6:1711,7:2353,8:1322,9:800,10:4288,11:7140,12:5630,13:3388,14:4596,15:4977,16:3332,17:2168


chrom: chr4
strand: +
right_annotated: ENSG00000168214.20:RBPJ:protein_coding:9253
samples:
,0:64445,1:15580,2:2806154,3:3508694,4:2175200,5:3227604,6:1209126,7:1929370,8:1279528,9:836800,10:5064518,11:3579074,12:2965000,13:2347846,14:1650478,15:1374627,16:1412038,17:572726


chrom: chr4
strand: -
right_annotated: ENSG00000163394.5:CCKAR:protein_coding:1720
samples:
,2:2778,3:8599,4:5978,5:6050,6:3236,7:1627,8:1985,9:1280,10:2300,11:10668,12:9206,13:2978,14:3518,15:1263,16:1000,17:1640


chrom: chr4
strand: +
right_annotated: ENSG00000109680.10:TBC1D19:protein_coding:3434
samples:
,0:17121,1:3474,2:108697,3:166561,4:144877,5:236036,6:127992,7:154635,8:142430,9:127442,10:340861,11:384165,12:319295,13:310973,14:287135,15:209558,16:303978,17:129891


chrom: chr4
strand: +
right_annotated: ENSG00000200999.1:SNORD74:snoRNA:80
samples:
,2:90,3:111,4:63,5:887,6:101,7:215,8:64,10:1372,11:1656,12:1211,13:1059,14:810,15:1785,16:2234,17:1743


chrom: chr4
strand: +
right_annotated: ENSG00000109689.14:STIM2:protein_coding:6909
samples:
,0:18222,1:7830,2:705574,3:919863,4:632764,5:834785,6:527817,7:639178,8:606241,9:447125,10:966290,11:1006895,12:963269,13:621993,14:761166,15:512078,16:685121,17:317374


chrom: chr4
strand: -
right_annotated: ENSG00000240005.5:RP11-293A21.1:antisense:589
samples:
,0:92,1:295,2:993,3:1712,4:300,5:3168,6:200,7:757,8:570,9:179,10:4264,11:5149,12:3537,13:3212,14:2484,15:1740,16:3464,17:1322


chrom: chr4
strand: -
right_annotated: ENSG00000250927.1:MESTP3:processed_pseudogene:968
samples:
,0:792,1:663,2:399,3:2751,4:2302,5:5156,6:1131,7:2017,8:3529,9:2183,10:2786,11:3404,12:4046,13:4547,14:4359,15:3465,16:6414,17:2660


chrom: chr4
strand: +
right_annotated: ENSG00000249542.2:EEF1A1P21:processed_pseudogene:1344
samples:
,0:94,2:7264,3:6881,4:4817,5:6234,6:5129,7:4500,8:2918,9:4146,10:7575,11:4041,12:6435,13:6454,14:4117,15:2120,16:6019,17:2704


chrom: chr4
strand: +
right_annotated: ENSG00000169851.15:PCDH7:protein_coding:12249
samples:
,0:19063,1:201,2:403134,3:465356,4:248227,5:1183875,6:383663,7:1071974,8:942715,9:1177448,10:921752,11:1021771,12:513772,13:1383234,14:694937,15:1374406,16:1793919,17:1372153


chrom: chr4
strand: -
right_annotated: ENSG00000250624.1:RP11-93M12.1:unprocessed_pseudogene:740
samples:
,4:117,5:222,6:285,7:109,8:198,9:303,10:4292,11:4078,12:3449,13:5334,14:3997,15:9907,16:11680,17:4933


chrom: chr4
strand: -
right_annotated: ENSG00000047365.11:ARAP2:protein_coding:12428
samples:
,1:2690,2:79744,3:111476,4:149177,5:415393,6:179780,7:305419,8:289358,9:285848,10:195552,11:277685,12:532248,13:614077,14:569561,15:422795,16:879979,17:394036


chrom: chr4
strand: +
right_annotated: ENSG00000247193.2:RP11-431M7.3:antisense:1785
samples:
,2:4911,3:6109,4:6095,5:15875,6:5570,7:13874,8:8341,9:2142,10:3622,11:8575,12:10243,13:17545,14:8716,15:9945,16:12984,17:2224


chrom: chr4
strand: +
right_annotated: ENSG00000197057.8:DTHD1:protein_coding:5618
samples:
,2:100,3:378,4:381,5:781,6:1581,7:1474,8:2168,9:404,10:600,11:202,12:1339,13:787,14:1639,15:2011,16:2563,17:536


chrom: chr4
strand: +
right_annotated: ENSG00000174145.7:NWD2:protein_coding:8325
samples:
,0:85,2:49452,3:70220,4:346807,5:1256615,6:560296,7:1221142,8:1284400,9:2521073,10:104704,11:101685,12:665489,13:1228999,14:1030258,15:1127907,16:1902910,17:2042861


chrom: chr4
strand: +
right_annotated: ENSG00000154274.14:C4orf19:protein_coding:2770
samples:
,0:180,1:204,2:4531,3:5269,4:2479,5:8029,6:5832,7:8389,8:9083,9:8346,10:12614,11:10382,12:5803,13:7196,14:7751,15:7400,16:15295,17:4633


chrom: chr4
strand: -
right_annotated: ENSG00000248936.1:RP11-36B15.1:antisense:534
samples:
,0:8,2:489,3:1335,4:1646,5:1994,6:531,7:914,8:1123,9:231,10:2740,11:1815,12:2273,13:1254,14:833,15:2730,16:1424,17:700


chrom: chr4
strand: -
right_annotated: ENSG00000181826.9:RELL1:protein_coding:1947
samples:
,0:23422,1:11635,2:45999,3:49534,4:39153,5:67029,6:28006,7:39182,8:33174,9:32374,10:276492,11:158155,12:176642,13:157995,14:119410,15:94436,16:159391,17:61488


chrom: chr4
strand: +
right_annotated: ENSG00000239532.1:RP11-9D8.1:processed_pseudogene:478
samples:
,0:240,1:201,2:164,3:2067,4:233,5:1053,6:1075,7:729,8:1141,9:336,10:2438,11:720,12:2387,13:1081,14:2085,15:919,16:1456,17:570


chrom: chr4
strand: +
right_annotated: ENSG00000169299.13:PGM2:protein_coding:3704
samples:
,0:62367,1:15240,2:237830,3:247435,4:177191,5:392557,6:134196,7:230492,8:211149,9:81784,10:564256,11:275911,12:295816,13:270581,14:177896,15:145763,16:260119,17:62454


chrom: chr4
strand: -
right_annotated: ENSG00000279386.1:AC021106.1:protein_coding:531
samples:
,0:152,1:57,2:3718,3:4948,4:2181,5:8240,6:2414,7:6162,8:4509,9:2970,10:8044,11:5500,12:6510,13:6836,14:5949,15:6058,16:9396,17:3494


chrom: chr4
strand: +
right_annotated: ENSG00000249863.2:RP11-177C12.1:processed_pseudogene:1058
samples:
,0:447,1:136,2:6535,3:8713,4:3370,5:16094,6:5623,7:11320,8:7321,9:9420,10:18391,11:14792,12:6926,13:9103,14:8693,15:9821,16:11045,17:4168


chrom: chr4
strand: +
right_annotated: ENSG00000065882.15:TBC1D1:protein_coding:9032
samples:
,0:85254,1:22360,2:1582979,3:1816349,4:1057706,5:1680433,6:742396,7:828070,8:687102,9:377303,10:2545116,11:1543828,12:1376982,13:1015090,14:860218,15:508710,16:658113,17:228041


chrom: chr4
strand: +
right_annotated: ENSG00000250254.1:PTTG2:protein_coding:691
samples:
,0:42,2:400,3:639,4:200,5:632,7:302,8:778,9:202,10:3028,11:2167,12:943,13:1952,14:249,15:777,16:1092


chrom: chr4
strand: -
right_annotated: ENSG00000251332.1:RP11-177C12.4:processed_pseudogene:710
samples:
,1:51,2:300,3:1497,4:352,5:1870,7:972,8:143,9:248,10:6332,11:9371,12:3583,13:4529,14:4743,15:2402,16:2873,17:601


chrom: chr4
strand: +
right_annotated: ENSG00000248227.1:RP11-83C7.1:lincRNA:500
samples:
,2:746,3:5619,4:2424,5:1865,6:2219,7:3886,8:1517,9:13,10:2937,11:3522,12:3662,13:583,14:1150,15:1447,16:1425,17:404


chrom: chr4
strand: -
right_annotated: ENSG00000231160.9:KLF3-AS1:processed_transcript:4830
samples:
,0:346,1:477,2:245066,3:223644,4:173193,5:365386,6:241391,7:596757,8:366148,9:224466,10:242076,11:169999,12:161194,13:266902,14:202795,15:352489,16:388768,17:141815


chrom: chr4
strand: -
right_annotated: ENSG00000271958.1:RP11-617D20.2:lincRNA:376
samples:
,2:485,3:1327,4:62,5:1525,6:1002,7:1186,8:1658,9:1427,10:2362,11:2637,12:3246,13:3999,14:3189,15:6391,16:6746,17:1765


chrom: chr4
strand: +
right_annotated: ENSG00000109787.12:KLF3:protein_coding:6297
samples:
,0:14397,1:13197,2:922594,3:940730,4:836225,5:1711117,6:762373,7:1231079,8:1118144,9:931644,10:1127687,11:1048908,12:1196750,13:1009205,14:1116228,15:932879,16:1132041,17:640225


chrom: chr4
strand: -
right_annotated: ENSG00000174123.10:TLR10:protein_coding:4217
samples:
,1:102,2:8135,3:6847,4:3795,5:18968,6:7146,7:28890,8:15846,9:5349,10:12219,11:5961,12:8131,13:11514,14:11322,15:14697,16:10399,17:1918


chrom: chr4
strand: -
right_annotated: ENSG00000174125.7:TLR1:protein_coding:4535
samples:
,0:51,1:2357,2:6951,3:13937,4:5427,5:35888,6:10743,7:43266,8:32633,9:7954,10:29835,11:30870,12:13159,13:30037,14:16748,15:44638,16:48454,17:5900


chrom: chr4
strand: -
right_annotated: ENSG00000174130.12:TLR6:protein_coding:6035
samples:
,0:1607,1:10359,2:4881,3:5149,4:4061,5:18338,6:9782,7:17404,8:19297,9:4987,10:29318,11:9875,12:11578,13:16131,14:12354,15:15075,16:23010,17:4722


chrom: chr4
strand: +
right_annotated: ENSG00000197712.11:FAM114A1:protein_coding:4871
samples:
,0:217387,1:22233,2:151868,3:146159,4:87030,5:160605,6:75075,7:97079,8:111743,9:32913,10:315027,11:144115,12:134176,13:121745,14:116520,15:66674,16:135632,17:22783


chrom: chr4
strand: -
right_annotated: ENSG00000121895.7:TMEM156:protein_coding:2562
samples:
,0:102,1:11908,2:1364,3:1553,4:1200,5:2090,6:2052,7:3827,8:1894,9:2952,10:450,11:452,12:1878,13:801,14:2038,15:2580,16:2267,17:403


chrom: chr4
strand: +
right_annotated: ENSG00000109790.16:KLHL5:protein_coding:5144
samples:
,0:77370,1:49657,2:518111,3:839321,4:452429,5:682656,6:366887,7:374628,8:360255,9:454380,10:1345058,11:1306120,12:1017885,13:656902,14:725969,15:372056,16:623824,17:410035


chrom: chr4
strand: -
right_annotated: ENSG00000249207.1:RP11-360F5.1:antisense:946
samples:
,0:9793,1:6235,2:46754,3:78084,4:36484,5:61842,6:41055,7:34460,8:40773,9:38165,10:117944,11:104171,12:80252,13:55593,14:57435,15:33267,16:53886,17:43392


chrom: chr4
strand: +
right_annotated: ENSG00000249685.1:RP11-360F5.3:lincRNA:455
samples:
,0:244,1:228,2:6375,3:13870,4:5521,5:7738,6:3192,7:1996,8:3993,9:7229,10:12279,11:13441,12:13012,13:8668,14:8429,15:4127,16:7725,17:4987


chrom: chr4
strand: +
right_annotated: ENSG00000157796.17:WDR19:protein_coding:8873
samples:
,0:25034,1:9846,2:1173432,3:1622406,4:1042413,5:1750723,6:1219339,7:1262953,8:1471382,9:1022805,10:1599118,11:1361084,12:1414042,13:1139174,14:1334464,15:725137,16:1223488,17:540248


chrom: chr4
strand: -
right_annotated: ENSG00000035928.14:RFC1:protein_coding:6713
samples:
,0:86752,1:35015,2:739496,3:966067,4:649554,5:1292169,6:616324,7:791675,8:711551,9:614733,10:1773608,11:1063826,12:1225284,13:969409,14:1140097,15:576669,16:1022898,17:398986


chrom: chr4
strand: -
right_annotated: ENSG00000206675.1:RNU6-32P:snRNA:107
samples:
,0:6299,1:3955,2:144,3:354,4:543,5:332,6:248,7:405,8:60,9:201,10:1770,11:1418,12:966,13:1230,14:1466,15:959,16:1218,17:372


chrom: chr4
strand: +
right_annotated: ENSG00000134962.6:KLB:protein_coding:6082
samples:
,0:391,1:2052,2:7184,3:25057,4:10401,5:18918,6:13144,7:15229,8:9875,9:10278,10:70113,11:92599,12:96240,13:53657,14:67893,15:34002,16:66785,17:29510


chrom: chr4
strand: -
right_annotated: ENSG00000163682.15:RPL9:protein_coding:3259
samples:
,0:94565,1:26574,2:472975,3:530010,4:333466,5:662098,6:384170,7:1774066,8:1192773,9:681455,10:765579,11:448183,12:612450,13:575138,14:496333,15:563480,16:1345678,17:320615


chrom: chr4
strand: +
right_annotated: ENSG00000121897.13:LIAS:protein_coding:2464
samples:
,0:6175,1:5035,2:85285,3:133553,4:91237,5:175308,6:109364,7:131102,8:119323,9:79449,10:132679,11:76451,12:110632,13:93652,14:104211,15:73912,16:119046,17:41432


chrom: chr4
strand: +
right_annotated: ENSG00000224097.5:RP11-472B18.1:transcribed_processed_pseudogene:1651
samples:
,0:899,1:1477,2:18884,3:23610,4:24766,5:39575,6:26172,7:30646,8:35585,9:17948,10:24631,11:12434,12:23638,13:22857,14:20458,15:15266,16:25370,17:10611


chrom: chr4
strand: -
right_annotated: ENSG00000109814.11:UGDH:protein_coding:4045
samples:
,0:162810,1:395103,2:248115,3:294665,4:255660,5:457893,6:224595,7:284423,8:262232,9:155833,10:613810,11:416514,12:530885,13:466428,14:396196,15:269844,16:407360,17:150977


chrom: chr4
strand: +
right_annotated: ENSG00000249348.1:UGDH-AS1:antisense:2787
samples:
,0:1835,1:1544,2:36097,3:48736,4:55626,5:72764,6:83840,7:53112,8:65169,9:61329,10:74602,11:67749,12:72875,13:61751,14:86212,15:56361,16:79091,17:46842


chrom: chr4
strand: -
right_annotated: ENSG00000163683.11:SMIM14:protein_coding:6721
samples:
,0:94113,1:33607,2:460493,3:929594,4:599025,5:1183867,6:704308,7:917421,8:658736,9:882971,10:1417206,11:1151804,12:1139830,13:1209054,14:1195175,15:668811,16:1143285,17:685939


chrom: chr4
strand: +
right_annotated: ENSG00000255458.5:RP11-539G18.3:lincRNA:2301
samples:
,0:543,1:92,2:15713,3:24906,4:19251,5:28553,6:20251,7:22390,8:25677,9:18512,10:19637,11:20670,12:22323,13:16217,14:23072,15:14573,16:27297,17:10041


chrom: chr4
strand: +
right_annotated: ENSG00000078140.13:UBE2K:protein_coding:5245
samples:
,0:34406,1:27227,2:1093819,3:1794428,4:1466847,5:2454563,6:1388901,7:1967864,8:1451142,9:2083252,10:1541475,11:1904972,12:2018928,13:1964157,14:2322479,15:1474109,16:1859720,17:1385834


chrom: chr4
strand: -
right_annotated: ENSG00000249019.2:RP11-539G18.1:processed_pseudogene:287
samples:
,1:256,3:516,4:166,5:249,7:325,8:214,10:4978,11:9242,12:4764,13:4401,14:7969,15:9616,16:7225,17:5671


chrom: chr4
strand: +
right_annotated: ENSG00000243260.3:RN7SL558P:misc_RNA:299
samples:
,0:102,2:88,3:296,4:101,5:46,7:83,8:200,9:382,10:4311,11:6122,12:4358,13:3014,14:5025,15:8022,16:7128,17:3539


chrom: chr4
strand: -
right_annotated: ENSG00000180610.10:ZBTB12BP:processed_pseudogene:1122
samples:
,1:261,2:1976,3:2672,4:1044,5:997,6:1716,7:1496,8:764,9:1288,10:9044,11:11217,12:6747,13:8807,14:5755,15:8957,16:8988,17:6867


chrom: chr4
strand: -
right_annotated: ENSG00000121892.14:PDS5A:protein_coding:12204
samples:
,0:114558,1:83249,2:1354695,3:2036192,4:1648376,5:2761333,6:1296007,7:1869799,8:1426211,9:1331122,10:3657842,11:2890885,12:3366315,13:2535108,14:2726605,15:1758534,16:2410079,17:1152363


chrom: chr4
strand: -
right_annotated: ENSG00000250568.1:RP11-333E13.2:processed_pseudogene:315
samples:
,0:2134,1:1718,2:128931,3:71066,4:78974,5:96990,6:123535,7:84899,8:154550,9:56311,10:42222,11:41233,12:54545,13:43281,14:63669,15:48886,16:70103,17:50091


chrom: chr4
strand: +
right_annotated: ENSG00000231707.4:PABPC1P1:processed_pseudogene:591
samples:
,0:198,1:311,2:777,3:534,4:118,5:303,6:586,7:255,8:1331,10:12045,11:14749,12:11582,13:10316,14:10752,15:9646,16:12965,17:7213


chrom: chr4
strand: -
right_annotated: ENSG00000205794.4:RP11-333E13.4:transcribed_processed_pseudogene:1613
samples:
,0:1433,1:551,2:6541,3:1861,4:7946,5:3046,6:8791,7:1540,8:4834,9:592,10:7219,11:6332,12:8221,13:13686,14:8126,15:8628,16:13709,17:7646


chrom: chr4
strand: +
right_annotated: ENSG00000078177.13:N4BP2:protein_coding:9835
samples:
,0:9721,1:11962,2:424844,3:658487,4:777687,5:1198144,6:641658,7:694364,8:528297,9:669641,10:2195107,11:2163518,12:2704168,13:1981064,14:2640835,15:1404120,16:1998958,17:991749


chrom: chr4
strand: -
right_annotated: ENSG00000248977.1:RP11-395I6.1:processed_pseudogene:168
samples:
,3:201,4:237,5:575,6:330,7:258,8:443,9:80,10:1538,11:1135,12:1425,13:978,14:1950,15:486,16:719,17:509


chrom: chr4
strand: +
right_annotated: ENSG00000260296.1:RP11-395I6.3:sense_overlapping:1157
samples:
,1:198,2:53741,3:119013,4:88555,5:106066,6:78088,7:137389,8:75735,9:103733,10:97927,11:104160,12:143179,13:90593,14:130610,15:85921,16:125520,17:60056


chrom: chr4
strand: +
right_annotated: ENSG00000168421.12:RHOH:protein_coding:6608
samples:
,0:190,1:241,2:726,3:830,4:99,5:1410,6:600,7:1813,8:600,9:404,10:751,11:790,12:585,13:1118,14:565,15:1018,16:537,17:661


chrom: chr4
strand: +
right_annotated: ENSG00000249241.1:AC195454.1:lincRNA:957
samples:
,1:102,2:599,3:616,4:1395,5:1444,6:538,7:1329,8:2294,9:2368,10:8368,11:2221,12:4166,13:10897,14:4152,15:6023,16:2757,17:1141


chrom: chr4
strand: +
right_annotated: ENSG00000174343.5:CHRNA9:protein_coding:3168
samples:
,0:102,1:186,2:49,3:803,4:200,5:586,6:793,7:197,8:556,9:1382,10:373,11:808,12:1560,13:294,14:703,15:202,16:1082,17:867


chrom: chr4
strand: -
right_annotated: ENSG00000163694.14:RBM47:protein_coding:8544
samples:
,0:1051,1:58631,2:3273,3:2656,4:3192,5:10578,6:4982,7:8273,8:12810,9:748,10:3487,11:3631,12:2031,13:7543,14:4599,15:6683,16:11575,17:2036


chrom: chr4
strand: +
right_annotated: ENSG00000179299.16:NSUN7:protein_coding:4728
samples:
,0:102,1:737,2:61097,3:85850,4:48192,5:56781,6:67065,7:20742,8:30440,9:127128,10:118717,11:75669,12:68453,13:35003,14:88755,15:16635,16:37173,17:86027


chrom: chr4
strand: +
right_annotated: ENSG00000248780.1:ARL4AP2:processed_pseudogene:601
samples:
,0:281,1:773,2:600,3:1170,4:900,5:2948,6:1694,7:2217,8:4473,9:6818,10:4962,11:3688,12:3470,13:3196,14:3549,15:2071,16:7765,17:3255


chrom: chr4
strand: -
right_annotated: ENSG00000163697.16:APBB2:protein_coding:12956
samples:
,0:40389,1:7243,2:632170,3:926480,4:706140,5:1159249,6:1333782,7:952937,8:1237122,9:1414702,10:1219575,11:1119251,12:1094903,13:853131,14:1794618,15:832432,16:1612321,17:1224560


chrom: chr4
strand: +
right_annotated: ENSG00000250906.1:RP11-632F7.3:antisense:477
samples:
,0:732,1:241,2:19478,3:27988,4:19776,5:35848,6:34826,7:30073,8:31248,9:35017,10:51296,11:35650,12:33542,13:29984,14:38101,15:23176,16:43259,17:32847


chrom: chr4
strand: -
right_annotated: ENSG00000207195.1:Y_RNA:misc_RNA:111
samples:
,0:53,2:954,3:1585,4:482,5:2062,6:1069,7:2013,8:1249,9:1100,10:2644,11:1203,12:1991,13:1996,14:1864,15:2475,16:1929,17:931


chrom: chr4
strand: -
right_annotated: ENSG00000251173.1:UCHL1-AS1:antisense:880
samples:
,0:117,1:135,2:454,3:1325,4:1188,5:2136,6:2041,7:1360,8:1631,9:4822,10:2303,11:1316,12:1119,13:1875,14:1695,15:1345,16:2308,17:1999


chrom: chr4
strand: +
right_annotated: ENSG00000154277.12:UCHL1:protein_coding:2282
samples:
,0:576401,1:374108,2:5757562,3:6556873,4:5883275,5:7319318,6:11733809,7:7376363,8:11265310,9:8291462,10:5717393,11:4256391,12:5840625,13:4290364,14:7177719,15:2829616,16:7117500,17:4636959


chrom: chr4
strand: +
right_annotated: ENSG00000064042.17:LIMCH1:protein_coding:10862
samples:
,0:217887,1:100314,2:5244985,3:8961204,4:7986272,5:8724124,6:6319196,7:3826776,8:3403705,9:5635993,10:6774510,11:10743776,12:13342074,13:7358641,14:9575004,15:3774032,16:4608817,17:4332390


chrom: chr4
strand: +
right_annotated: ENSG00000239627.3:RPL12P20:processed_pseudogene:479
samples:
,0:153,2:165,3:1038,4:436,5:689,6:22,7:1201,9:107,10:23381,11:75702,12:34703,13:19441,14:16543,15:32165,16:24120,17:21498


chrom: chr4
strand: -
right_annotated: ENSG00000249216.1:RP11-227F19.5:antisense:435
samples:
,0:54,1:153,2:8202,3:20879,4:13790,5:17484,6:9070,7:10076,8:7467,9:11392,10:15260,11:43828,12:25399,13:17303,14:18435,15:11267,16:11648,17:12964


chrom: chr4
strand: +
right_annotated: ENSG00000109133.12:TMEM33:protein_coding:8240
samples:
,0:73754,1:49360,2:352938,3:686810,4:374933,5:659157,6:292135,7:456132,8:297565,9:329732,10:1799815,11:1532186,12:1062932,13:1041258,14:970964,15:692074,16:883820,17:527023


chrom: chr4
strand: +
right_annotated: ENSG00000182308.6:DCAF4L1:protein_coding:4772
samples:
,0:204,1:204,2:5062,3:5945,4:3409,5:6449,6:4629,7:7776,8:5098,9:6817,10:12752,11:12579,12:8089,13:6179,14:8647,15:7405,16:9098,17:6469


chrom: chr4
strand: -
right_annotated: ENSG00000272862.1:RP11-814H16.2:lincRNA:497
samples:
,0:51,1:102,2:200,3:1230,4:1400,5:1009,6:697,7:1399,8:1500,9:594,10:1948,11:4104,12:5649,13:3635,14:3192,15:2477,16:2576,17:1075


chrom: chr4
strand: +
right_annotated: ENSG00000014824.13:SLC30A9:protein_coding:7225
samples:
,0:135966,1:47904,2:1031613,3:1657258,4:1134618,5:2163037,6:1522571,7:1718078,8:1410231,9:1543033,10:2791986,11:1949275,12:2300046,13:2090037,14:2432215,15:1196862,16:2170018,17:1132688


chrom: chr4
strand: +
right_annotated: ENSG00000249212.1:ATP1B1P1:unprocessed_pseudogene:915
samples:
,1:364,2:2190,3:2173,4:3110,5:6686,6:3405,7:4787,8:4020,9:2874,10:24654,11:33060,12:30093,13:26224,14:26193,15:23993,16:29917,17:16619


chrom: chr4
strand: -
right_annotated: ENSG00000188848.15:BEND4:protein_coding:8765
samples:
,2:329000,3:264273,4:281747,5:451371,6:247577,7:292360,8:396197,9:220338,10:608328,11:355763,12:444927,13:334269,14:370124,15:258101,16:518294,17:174349


chrom: chr4
strand: +
right_annotated: ENSG00000178343.4:SHISA3:protein_coding:1971
samples:
,2:5733,3:604,4:1718,5:385,6:3071,7:404,8:1380,9:1212,10:6441,11:1063,12:785,13:682,14:1386,15:606,16:400,17:946


chrom: chr4
strand: -
right_annotated: ENSG00000124406.16:ATP8A1:protein_coding:11199
samples:
,0:204,1:102,2:1301524,3:2178217,4:989213,5:2590036,6:1486433,7:2215591,8:1675151,9:3029224,10:3612412,11:3556481,12:2566600,13:2870571,14:3474370,15:2198514,16:3724071,17:2979360


chrom: chr4
strand: +
right_annotated: ENSG00000240167.1:RPS7P7:processed_pseudogene:571
samples:
,1:77,2:52,3:1695,4:195,5:690,6:193,7:594,8:66,9:641,10:2964,11:3705,12:1827,13:1760,14:3283,15:5361,16:3366,17:4201


chrom: chr4
strand: -
right_annotated: ENSG00000248283.2:CCNL2P1:processed_pseudogene:969
samples:
,2:783,3:2473,4:1400,5:3897,6:1190,7:2680,8:1638,9:1641,10:20897,11:29042,12:18966,13:11712,14:23989,15:27094,16:29414,17:21354


chrom: chr4
strand: -
right_annotated: ENSG00000213851.3:RP11-324J13.1:processed_pseudogene:897
samples:
,0:530,1:245,2:481,3:365,4:648,5:314,6:1144,7:300,8:1729,9:98,10:1092,12:390,13:1003,14:488,15:37,16:844,17:158


chrom: chr4
strand: +
right_annotated: ENSG00000124399.4:NDUFB4P12:processed_pseudogene:390
samples:
,0:3434,1:2799,2:10277,3:23800,4:9014,5:19584,6:14523,7:23484,8:10461,9:8064,10:32468,11:15794,12:13477,13:14854,14:12205,15:10644,16:13541,17:6664


chrom: chr4
strand: +
right_annotated: ENSG00000251350.1:LVCAT1:lincRNA:2823
samples:
,2:400,3:202,4:6892,5:2218,6:1958,7:1413,8:800,9:404,10:5395,11:4734,12:5465,13:2530,14:6101,15:2249,16:4675,17:2219


chrom: chr4
strand: -
right_annotated: ENSG00000183783.6:KCTD8:protein_coding:2704
samples:
,2:8963,3:6650,4:5728,5:7865,6:24545,7:23069,8:31330,9:17313,10:8259,11:6543,12:11509,13:10857,14:20429,15:21316,16:29265,17:19447


chrom: chr4
strand: -
right_annotated: ENSG00000177752.14:YIPF7:protein_coding:1813
samples:
,0:667,1:507,2:13839,3:15483,4:10619,5:21126,6:11879,7:11101,8:13302,9:9996,10:22605,11:20819,12:18626,13:27720,14:20552,15:11975,16:34023,17:7733


chrom: chr4
strand: +
right_annotated: ENSG00000151806.13:GUF1:protein_coding:4454
samples:
,0:18721,1:9992,2:526556,3:802882,4:631579,5:1038517,6:664296,7:763305,8:687850,9:672692,10:1039188,11:972852,12:1033176,13:794105,14:1025348,15:599253,16:944765,17:452649


chrom: chr4
strand: -
right_annotated: ENSG00000163281.11:GNPDA2:protein_coding:7150
samples:
,0:28249,1:11317,2:289560,3:540028,4:383003,5:671367,6:343106,7:522693,8:407256,9:370781,10:826135,11:914731,12:748315,13:609684,14:665129,15:522666,16:666812,17:342233


chrom: chr4
strand: -
right_annotated: ENSG00000273369.1:RP11-700J17.1:antisense:441
samples:
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chrom: chr4
strand: +
right_annotated: ENSG00000272936.1:RP11-700J17.2:antisense:561
samples:
,0:200,1:203,2:4798,3:19686,4:11085,5:12810,6:9657,7:22696,8:7792,9:12109,10:31299,11:63692,12:25345,13:27544,14:18637,15:23800,16:19724,17:14885


chrom: chr4
strand: -
right_annotated: ENSG00000163285.7:GABRG1:protein_coding:6785
samples:
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chrom: chr4
strand: -
right_annotated: ENSG00000260878.1:RP11-320H14.1:sense_overlapping:668
samples:
,2:1413,3:7837,4:3783,5:6258,6:12946,7:38435,8:13819,9:18366,10:26697,11:27122,12:16447,13:19740,14:38490,15:39547,16:70282,17:49292


chrom: chr4
strand: -
right_annotated: ENSG00000151834.15:GABRA2:protein_coding:11930
samples:
,1:51,2:156071,3:292859,4:247771,5:501376,6:458336,7:704646,8:695644,9:848028,10:489671,11:454744,12:439938,13:398652,14:767909,15:803765,16:1070762,17:805182


chrom: chr4
strand: +
right_annotated: ENSG00000249330.1:RP11-436F23.1:antisense:549
samples:
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chrom: chr4
strand: -
right_annotated: ENSG00000249936.3:RAC1P2:processed_pseudogene:579
samples:
,0:28126,1:16584,2:439227,3:511064,4:458177,5:930941,6:599349,7:645147,8:848093,9:536401,10:382863,11:309432,12:467381,13:506849,14:526854,15:286493,16:458546,17:279275


chrom: chr4
strand: -
right_annotated: ENSG00000109158.10:GABRA4:protein_coding:12131
samples:
,2:10659,3:16145,4:206155,5:71447,6:242271,7:198029,8:328679,9:878973,10:29286,11:28852,12:530283,13:86400,14:766214,15:312192,16:1004804,17:1242986


chrom: chr4
strand: +
right_annotated: ENSG00000163288.13:GABRB1:protein_coding:3140
samples:
,2:21064,3:16587,4:90701,5:88643,6:180774,7:99154,8:190148,9:184702,10:37716,11:52132,12:189547,13:127475,14:421895,15:245854,16:530391,17:407502


chrom: chr4
strand: +
right_annotated: ENSG00000260918.1:RP11-731J8.2:sense_overlapping:7000
samples:
,2:40260,3:74993,4:279662,5:270892,6:524281,7:608680,8:704627,9:1072053,10:43985,11:58239,12:214002,13:118943,14:523969,15:473088,16:639356,17:712368


chrom: chr4
strand: -
right_annotated: ENSG00000169019.10:COMMD8:protein_coding:1766
samples:
,0:45231,1:16315,2:42775,3:69908,4:35323,5:89820,6:44867,7:67894,8:52586,9:53579,10:157809,11:101045,12:80034,13:91976,14:71226,15:50156,16:79597,17:39369


chrom: chr4
strand: +
right_annotated: ENSG00000145246.13:ATP10D:protein_coding:7965
samples:
,0:129137,1:5796,2:109449,3:68950,4:99315,5:193163,6:110514,7:177210,8:201320,9:148442,10:321661,11:101140,12:205529,13:158600,14:201594,15:155008,16:321626,17:132515


chrom: chr4
strand: -
right_annotated: ENSG00000248254.1:AC092597.3:antisense:601
samples:
,0:5777,1:226,2:4544,3:3765,4:5635,5:9897,6:6481,7:8073,8:11354,9:6099,10:16638,11:6240,12:14051,13:6699,14:12552,15:7470,16:13771,17:5490


chrom: chr4
strand: -
right_annotated: ENSG00000145244.11:CORIN:protein_coding:10087
samples:
,0:44176,1:102,2:2107,3:2197,4:1869,5:3427,6:3146,7:3845,8:5312,9:8442,10:11018,11:9388,12:9507,13:6761,14:9525,15:7646,16:16160,17:9507


chrom: chr4
strand: +
right_annotated: ENSG00000242262.1:RP11-100N21.1:processed_pseudogene:616
samples:
,0:25187,1:14179,2:17528,3:26991,4:17090,5:36053,6:22932,7:29930,8:27431,9:19511,10:12037,11:9775,12:10902,13:14991,14:9725,15:10930,16:15470,17:8087


chrom: chr4
strand: +
right_annotated: ENSG00000282917.1:RP11-121C2.3:antisense:550
samples:
,0:850,1:1003,2:12292,3:19234,4:14839,5:32534,6:21369,7:27256,8:20911,9:24211,10:36774,11:41109,12:38540,13:44425,14:39677,15:33392,16:33356,17:26253


chrom: chr4
strand: -
right_annotated: ENSG00000259959.1:RP11-121C2.2:lincRNA:4218
samples:
,0:1739,1:612,2:72439,3:208640,4:130801,5:195960,6:137965,7:212978,8:166020,9:222699,10:170332,11:216524,12:255874,13:194354,14:275933,15:197428,16:220745,17:184065


chrom: chr4
strand: -
right_annotated: ENSG00000170448.11:NFXL1:protein_coding:4484
samples:
,0:9935,1:7723,2:166282,3:228969,4:197535,5:364147,6:248621,7:291967,8:263349,9:272969,10:383345,11:433468,12:488592,13:476865,14:515586,15:350157,16:427377,17:328201


chrom: chr4
strand: +
right_annotated: ENSG00000163293.11:NIPAL1:protein_coding:5983
samples:
,0:2782,1:1044,2:15150,3:6571,4:13599,5:12950,6:33149,7:12958,8:24316,9:36321,10:16615,11:12364,12:14185,13:18338,14:37231,15:14375,16:30753,17:31812


chrom: chr4
strand: -
right_annotated: ENSG00000198515.13:CNGA1:protein_coding:3581
samples:
,1:32,2:260,3:1004,4:873,5:202,6:1742,7:240,8:400,9:2632,10:2326,11:2771,12:1000,13:1178,14:2120,15:1413,16:2345,17:1523


chrom: chr4
strand: -
right_annotated: ENSG00000074966.10:TXK:protein_coding:3472
samples:
,0:102,1:234,2:1202,3:709,4:1902,5:5935,6:14387,7:16015,8:17134,9:26113,10:1651,11:1629,12:2725,13:5043,14:15634,15:15279,16:27317,17:15002


chrom: chr4
strand: -
right_annotated: ENSG00000135605.12:TEC:protein_coding:4030
samples:
,0:508,1:1865,2:5944,3:1626,4:5815,5:18194,6:24233,7:27548,8:31760,9:34376,10:14667,11:4238,12:15900,13:17003,14:55969,15:41001,16:74066,17:42557


chrom: chr4
strand: +
right_annotated: ENSG00000109171.14:SLAIN2:protein_coding:6524
samples:
,0:47732,1:11187,2:798356,3:972933,4:959919,5:1603301,6:905750,7:1207169,8:1063958,9:957411,10:1485310,11:1354392,12:1706057,13:1846752,14:1741000,15:1334746,16:1861673,17:864519


chrom: chr4
strand: +
right_annotated: ENSG00000145248.6:SLC10A4:protein_coding:1790
samples:
,1:1985,2:15416,3:20854,4:13072,5:21811,6:97741,7:33557,8:61943,9:29264,10:13930,11:11728,12:11261,13:13938,14:85126,15:18927,16:54112,17:19471


chrom: chr4
strand: +
right_annotated: ENSG00000182223.7:ZAR1:protein_coding:1460
samples:
,1:102,2:815,3:1115,4:467,5:754,6:3011,7:1470,8:1463,9:2778,10:2453,11:1981,12:1266,13:2229,14:6708,15:2662,16:5728,17:4390


chrom: chr4
strand: -
right_annotated: ENSG00000075539.13:FRYL:protein_coding:18152
samples:
,0:76129,1:24823,2:1195659,3:1560311,4:1352001,5:2346435,6:1198835,7:1452395,8:1310727,9:810299,10:3826065,11:3246297,12:3383403,13:2591516,14:2936925,15:1876653,16:2760665,17:974592


chrom: chr4
strand: +
right_annotated: ENSG00000109180.14:OCIAD1:protein_coding:4714
samples:
,0:98456,1:54069,2:903534,3:1575436,4:1108595,5:2260893,6:1489398,7:1899738,8:1613056,9:1887732,10:1676592,11:1180741,12:1636725,13:1329454,14:1676986,15:858174,16:1544339,17:767508


chrom: chr4
strand: -
right_annotated: ENSG00000248256.1:OCIAD1-AS1:antisense:265
samples:
,0:931,1:413,2:7637,3:25024,4:11802,5:33321,6:16396,7:27401,8:15048,9:18622,10:46915,11:45617,12:39070,13:37236,14:31657,15:27895,16:34542,17:21092


chrom: chr4
strand: -
right_annotated: ENSG00000145247.11:OCIAD2:protein_coding:2483
samples:
,0:9480,1:21638,2:728503,3:644823,4:555946,5:936129,6:687432,7:617640,8:804486,9:316038,10:463352,11:360105,12:484282,13:455898,14:446386,15:292616,16:443543,17:177612


chrom: chr4
strand: -
right_annotated: ENSG00000225455.3:TPI1P4:processed_pseudogene:473
samples:
,0:151,1:196,2:251,3:126,4:36,5:391,6:152,7:144,8:201,9:54,10:384,12:316,13:182,14:177,15:18,16:36,17:151


chrom: chr4
strand: -
right_annotated: ENSG00000251056.1:ANKRD20A17P:unprocessed_pseudogene:1330
samples:
,0:51,1:51,2:795,3:202,4:6636,5:690,6:3108,7:404,8:2442,9:844,10:3326,11:1453,12:27665,13:1590,14:22441,15:2537,16:20641,17:4023


chrom: chr4
strand: +
right_annotated: ENSG00000109184.14:DCUN1D4:protein_coding:7625
samples:
,0:62366,1:24090,2:517464,3:843964,4:646492,5:1138574,6:589933,7:914124,8:665726,9:597417,10:1568518,11:1425443,12:1426533,13:1370413,14:1302588,15:945900,16:1249986,17:568476


chrom: chr4
strand: -
right_annotated: ENSG00000250473.1:DUTP7:processed_pseudogene:486
samples:
,0:102,1:402,2:520,3:720,4:925,5:918,6:465,7:1004,8:302,9:404,10:22655,11:24053,12:21485,13:18366,14:16361,15:26093,16:22887,17:10419


chrom: chr4
strand: +
right_annotated: ENSG00000272576.1:RP11-365H22.2:lincRNA:610
samples:
,0:255,1:102,2:2246,3:11395,4:2143,5:6546,6:3717,7:7125,8:2515,9:2445,10:11750,11:16739,12:10382,13:10519,14:9467,15:6593,16:7777,17:3742


chrom: chr4
strand: -
right_annotated: ENSG00000188993.3:LRRC66:protein_coding:3327
samples:
,0:296,2:10910,3:34402,4:12538,5:33964,6:17764,7:23404,8:22431,9:17163,10:25005,11:34445,12:22734,13:28270,14:27082,15:21792,16:25371,17:15160


chrom: chr4
strand: -
right_annotated: ENSG00000163069.12:SGCB:protein_coding:4541
samples:
,0:79892,1:12431,2:1127899,3:2170165,4:1424017,5:2262663,6:1213298,7:1560216,8:1324298,9:1289160,10:1511434,11:1895963,12:1849021,13:1504913,14:1649073,15:998319,16:1383656,17:853875


chrom: chr4
strand: +
right_annotated: ENSG00000163071.10:SPATA18:protein_coding:4941
samples:
,0:23871,1:1827,2:4988,3:8799,4:22766,5:10629,6:21550,7:11531,8:14937,9:25969,10:5688,11:7817,12:26123,13:7651,14:21227,15:5862,16:20150,17:14351


chrom: chr4
strand: -
right_annotated: ENSG00000109189.12:USP46:protein_coding:8917
samples:
,0:29834,1:11990,2:446956,3:820223,4:739449,5:2010035,6:968206,7:2058298,8:1378244,9:1318450,10:1221014,11:1151628,12:1489680,13:1798317,14:1707261,15:1530093,16:2296751,17:1004591


chrom: chr4
strand: +
right_annotated: ENSG00000248866.1:USP46-AS1:lincRNA:1048
samples:
,0:2160,1:805,2:16235,3:31301,4:23725,5:68156,6:30291,7:51261,8:35577,9:27834,10:38603,11:44972,12:58248,13:65635,14:54534,15:44508,16:66148,17:26286


chrom: chr4
strand: +
right_annotated: ENSG00000226950.6:DANCR:processed_transcript:2285
samples:
,0:16954,1:14860,2:602480,3:593474,4:443362,5:876634,6:603854,7:593566,8:702404,9:282485,10:692133,11:403282,12:490743,13:535176,14:362977,15:228399,16:489960,17:164257


chrom: chr4
strand: +
right_annotated: ENSG00000212588.1:SNORA26:snoRNA:122
samples:
,0:15190,1:12271,2:6471,3:11943,4:10553,5:10948,6:5322,7:7302,8:10035,9:5698,10:17321,11:17395,12:19894,13:19725,14:13155,15:12674,16:14798,17:8517


chrom: chr4
strand: -
right_annotated: ENSG00000248375.1:RP11-177B4.1:processed_pseudogene:751
samples:
,0:510,1:405,2:3094,3:5541,4:4111,5:11175,6:5454,7:7648,8:2806,9:2320,10:18336,11:23882,12:21267,13:11213,14:11077,15:9970,16:12897,17:5698


chrom: chr4
strand: -
right_annotated: ENSG00000226887.7:ERVMER34-1:protein_coding:4077
samples:
,0:45,1:306,2:5561,3:6851,4:5815,5:26235,6:13995,7:111117,8:102151,9:20266,10:7618,11:5925,12:5616,13:13566,14:17238,15:73008,16:117652,17:10920


chrom: chr4
strand: +
right_annotated: ENSG00000250302.1:LINC01618:lincRNA:727
samples:
,2:251,3:281,4:169,5:756,6:626,7:1104,8:442,9:563,10:732,11:1338,12:717,13:1390,14:1297,15:1983,16:881,17:1246


chrom: chr4
strand: +
right_annotated: ENSG00000128045.6:RASL11B:protein_coding:2472
samples:
,0:305,1:102,2:213256,3:378435,4:304820,5:1008736,6:449675,7:1331958,8:1190407,9:456429,10:281835,11:263643,12:293582,13:628471,14:357316,15:584433,16:789285,17:234263


chrom: chr4
strand: -
right_annotated: ENSG00000184178.15:SCFD2:protein_coding:3185
samples:
,0:58474,1:11699,2:196692,3:218338,4:171195,5:330161,6:259361,7:253366,8:263170,9:218435,10:412033,11:300342,12:324638,13:280397,14:321967,15:180967,16:315868,17:160796


chrom: chr4
strand: +
right_annotated: ENSG00000248115.1:RP11-752D24.2:antisense:4840
samples:
,2:600,3:1010,4:900,5:1405,6:425,7:3474,8:2805,9:1185,10:21770,11:31446,12:12141,13:9247,14:11602,15:16957,16:21883,17:10996


chrom: chr4
strand: +
right_annotated: ENSG00000145216.15:FIP1L1:protein_coding:5636
samples:
,0:95593,1:38829,2:890434,3:818140,4:907373,5:1481376,6:873260,7:956719,8:1014624,9:858378,10:1348047,11:1073731,12:1538941,13:1284572,14:1485021,15:871924,16:1513483,17:656271


chrom: chr4
strand: +
right_annotated: ENSG00000282278.1:RP11-231C18.3:protein_coding:2550
samples:
,0:131030,1:16061,2:428108,3:369917,4:375487,5:800955,6:459176,7:506396,8:671510,9:572467,10:688693,11:472028,12:705807,13:650004,14:831744,15:454861,16:1036541,17:459511


chrom: chr4
strand: -
right_annotated: ENSG00000072201.13:LNX1:protein_coding:5725
samples:
,0:12011,1:4000,2:287662,3:635132,4:756376,5:674827,6:897751,7:523646,8:746553,9:864612,10:405763,11:742129,12:1041663,13:583550,14:1031502,15:368208,16:958904,17:559006


chrom: chr4
strand: +
right_annotated: ENSG00000250930.5:LNX1-AS1:antisense:1381
samples:
,3:815,4:100,5:397,6:238,7:727,8:195,9:245,10:3876,11:21553,12:13937,13:8387,14:23661,15:13377,16:16299,17:16985


chrom: chr4
strand: -
right_annotated: ENSG00000229585.4:RPL21P44:processed_pseudogene:472
samples:
,0:276,2:715,3:2377,4:562,5:1989,6:2072,7:910,8:1889,9:2905,10:3768,11:6179,12:6091,13:6972,14:6664,15:4456,16:4646,17:5179


chrom: chr4
strand: -
right_annotated: ENSG00000272650.1:RP11-571I18.4:lincRNA:298
samples:
,0:204,1:251,3:1008,4:810,5:1358,6:773,7:1752,8:1003,9:759,10:4312,11:7557,12:4047,13:8557,14:5797,15:3936,16:6853,17:3599


chrom: chr4
strand: -
right_annotated: ENSG00000109220.10:CHIC2:protein_coding:1318
samples:
,0:39508,1:3395,2:106694,3:79029,4:102137,5:110610,6:100723,7:79430,8:101449,9:61355,10:147726,11:95831,12:138775,13:113583,14:123439,15:75933,16:140647,17:59181


chrom: chr4
strand: +
right_annotated: ENSG00000269506.2:RP11-571I18.5:antisense:1614
samples:
,0:915,2:400,4:200,5:524,7:606,9:202,10:15818,11:35425,12:21841,13:17040,14:17649,15:17366,16:17336,17:10423


chrom: chr4
strand: +
right_annotated: ENSG00000180613.10:GSX2:protein_coding:1926
samples:
,2:1373,3:403,4:398,5:3936,6:7016,7:1273,8:12365,9:2948,10:200,12:1599,13:2264,14:4770,15:1616,16:7603,17:1954


chrom: chr4
strand: +
right_annotated: ENSG00000134853.11:PDGFRA:protein_coding:9732
samples:
,0:296997,1:256,2:251568,3:265873,4:170833,5:774323,6:478833,7:626369,8:1118594,9:1039550,10:527045,11:329360,12:365948,13:576373,14:880252,15:475364,16:1554490,17:761407


chrom: chr4
strand: +
right_annotated: ENSG00000157404.15:KIT:protein_coding:5563
samples:
,0:3298,2:968534,3:1225291,4:1114582,5:1217789,6:1300135,7:755923,8:779231,9:2060846,10:1530877,11:1289021,12:1749490,13:902236,14:2010520,15:519470,16:968904,17:1419425


chrom: chr4
strand: -
right_annotated: ENSG00000128052.8:KDR:protein_coding:6259
samples:
,2:188462,3:240810,4:169311,5:435019,6:234567,7:287584,8:324282,9:346381,10:358037,11:242379,12:292280,13:286080,14:306883,15:201752,16:345416,17:187714


chrom: chr4
strand: +
right_annotated: ENSG00000128039.10:SRD5A3:protein_coding:4420
samples:
,0:10288,1:5983,2:117382,3:131501,4:81054,5:145763,6:130724,7:179267,8:151448,9:175260,10:188704,11:110823,12:118626,13:100171,14:154143,15:123931,16:168446,17:127154


chrom: chr4
strand: -
right_annotated: ENSG00000251111.2:FCF1P8:processed_pseudogene:597
samples:
,0:192,1:101,2:83,3:193,4:100,5:761,6:282,7:973,8:457,9:85,10:4618,11:3596,12:6204,13:4104,14:4808,15:6221,16:7931,17:6091


chrom: chr4
strand: -
right_annotated: ENSG00000249700.8:SRD5A3-AS1:processed_transcript:5148
samples:
,0:2026,1:699,2:30670,3:36251,4:23740,5:50253,6:41527,7:63272,8:55299,9:61714,10:45936,11:37872,12:34734,13:34072,14:49990,15:52587,16:67590,17:53564


chrom: chr4
strand: +
right_annotated: ENSG00000273257.1:RP11-177J6.1:lincRNA:323
samples:
,2:2011,3:4617,4:1387,5:3098,6:3237,7:5564,8:4802,9:5563,10:4752,11:3252,12:2991,13:2056,14:5031,15:4396,16:2922,17:3684


chrom: chr4
strand: +
right_annotated: ENSG00000134851.12:TMEM165:protein_coding:7045
samples:
,0:165960,1:36426,2:316950,3:371583,4:305963,5:373295,6:270275,7:272820,8:250224,9:201969,10:660799,11:531141,12:464057,13:426901,14:399106,15:303333,16:416414,17:200944


chrom: chr4
strand: +
right_annotated: ENSG00000239040.1:Y_RNA:misc_RNA:103
samples:
,0:170,2:1201,3:1818,4:1689,5:2439,6:793,7:800,8:819,9:2147,10:2350,11:1880,12:2881,13:1707,14:1043,15:2543,16:3672,17:982


chrom: chr4
strand: -
right_annotated: ENSG00000134852.14:CLOCK:protein_coding:11762
samples:
,0:69050,1:16962,2:458721,3:863822,4:530307,5:912207,6:500551,7:741579,8:636109,9:726143,10:1287034,11:1509622,12:1149794,13:1042536,14:1262983,15:938114,16:1300385,17:843699


chrom: chr4
strand: -
right_annotated: ENSG00000223305.1:RN7SKP30:misc_RNA:334
samples:
,0:36,1:303,2:668,3:1347,4:844,5:540,6:326,7:713,8:514,9:580,10:30399,11:18707,12:17519,13:11585,14:13757,15:11975,16:21473,17:7118


chrom: chr4
strand: +
right_annotated: ENSG00000272969.1:RP11-528I4.2:antisense:778
samples:
,0:755,1:204,2:2684,3:2684,4:3489,5:4038,6:6095,7:3028,8:3364,9:3656,10:7093,11:5243,12:4219,13:3105,14:4588,15:4218,16:6438,17:5003


chrom: chr4
strand: -
right_annotated: ENSG00000109255.11:NMU:protein_coding:975
samples:
,1:399,2:30348,3:26655,4:18626,5:14851,6:8548,7:6508,8:9116,9:8703,10:58990,11:18284,12:15307,13:8948,14:10522,15:2266,16:7265,17:5734


chrom: chr4
strand: +
right_annotated: ENSG00000090989.17:EXOC1:protein_coding:5347
samples:
,0:72688,1:23219,2:730693,3:1154954,4:846759,5:1541558,6:1093576,7:1211171,8:1142251,9:1129152,10:1610190,11:1237217,12:1576486,13:1249600,14:1731915,15:788963,16:1535606,17:699567


chrom: chr4
strand: +
right_annotated: ENSG00000202358.1:RNU6-652P:snRNA:107
samples:
,2:1080,3:3323,4:4048,5:2992,6:2137,7:2826,8:2275,9:3102,10:6717,11:7032,12:10663,13:5612,14:8295,15:6232,16:6245,17:3259


chrom: chr4
strand: +
right_annotated: ENSG00000174799.10:CEP135:protein_coding:8640
samples:
,0:15680,1:12081,2:270593,3:430457,4:326102,5:421420,6:199567,7:371839,8:272636,9:386896,10:944242,11:587349,12:587842,13:440229,14:541648,15:450162,16:619703,17:322706


chrom: chr4
strand: +
right_annotated: ENSG00000109265.13:KIAA1211:protein_coding:6489
samples:
,1:1579,2:2917501,3:2565123,4:3081934,5:4684570,6:4954232,7:3226747,8:5100615,9:3366257,10:2702717,11:2661046,12:4200869,13:2392751,14:5642994,15:3087608,16:4953003,17:2727276


chrom: chr4
strand: -
right_annotated: ENSG00000252489.1:RNU6-197P:snRNA:100
samples:
,2:138,3:167,5:479,6:86,7:29,8:105,9:78,10:2362,11:3256,12:2304,13:2581,14:2475,15:3442,16:2382,17:2357


chrom: chr4
strand: -
right_annotated: ENSG00000250324.2:MRPL22P1:processed_pseudogene:616
samples:
,2:173,3:202,4:493,5:511,6:669,7:412,10:5100,11:12417,12:4607,13:8641,14:9579,15:9818,16:6399,17:2838


chrom: chr4
strand: -
right_annotated: ENSG00000157426.13:AASDH:protein_coding:4654
samples:
,0:15324,1:7160,2:188001,3:303853,4:192136,5:467214,6:186778,7:313850,8:245518,9:217366,10:638639,11:447906,12:474494,13:419734,14:418126,15:300476,16:438616,17:193634


chrom: chr4
strand: +
right_annotated: ENSG00000242083.2:RPL7AP31:processed_pseudogene:798
samples:
,0:4132,1:4745,2:119619,3:139859,4:107173,5:146384,6:159782,7:148438,8:134191,9:50236,10:262212,11:108760,12:163327,13:159929,14:128762,15:87400,16:117722,17:40829


chrom: chr4
strand: +
right_annotated: ENSG00000269921.1:RP11-646I6.5:lincRNA:529
samples:
,0:182,2:7433,3:8809,4:6085,5:9725,6:6651,7:4388,8:7043,9:5982,10:12818,11:12784,12:8028,13:9651,14:11718,15:8614,16:11166,17:5324


chrom: chr4
strand: -
right_annotated: ENSG00000128059.8:PPAT:protein_coding:5439
samples:
,0:31387,1:37060,2:287876,3:345593,4:256440,5:391563,6:168333,7:302183,8:247747,9:227646,10:995790,11:469617,12:444802,13:357332,14:285392,15:203900,16:389617,17:153600


chrom: chr4
strand: +
right_annotated: ENSG00000270147.1:RP11-646I6.6:lincRNA:560
samples:
,0:502,1:499,2:16752,3:24498,4:12123,5:22005,6:10093,7:18159,8:15853,9:12522,10:52810,11:27985,12:38725,13:18536,14:27838,15:16097,16:27157,17:9416


chrom: chr4
strand: +
right_annotated: ENSG00000283156.1:RP11-646I6.3:transcribed_unprocessed_pseudogene:4585
samples:
,0:432,1:659,2:8245,3:4671,4:5095,5:11325,6:9312,7:7233,8:13294,9:7760,10:71438,11:50979,12:44033,13:32977,14:40472,15:42502,16:50409,17:26463


chrom: chr4
strand: +
right_annotated: ENSG00000128050.8:PAICS:protein_coding:7517
samples:
,0:96237,1:119943,2:1401896,3:1646384,4:983062,5:2170571,6:536066,7:1246796,8:981134,9:504950,10:1933604,11:1161436,12:1080024,13:1033628,14:603826,15:750610,16:844273,17:312865


chrom: chr4
strand: +
right_annotated: ENSG00000174780.15:SRP72:protein_coding:4697
samples:
,0:66285,1:34549,2:1465160,3:1826818,4:1367087,5:2836950,6:1591916,7:1836068,8:1579939,9:1387891,10:1762309,11:1511652,12:1789683,13:1813650,14:1948090,15:1170896,16:1544414,17:766780


chrom: chr4
strand: +
right_annotated: ENSG00000196503.2:ARL9:protein_coding:1258
samples:
,0:305,2:42796,3:114586,4:66336,5:139403,6:71096,7:104817,8:97835,9:43810,10:61381,11:59289,12:70926,13:76072,14:59896,15:39732,16:80544,17:22435


chrom: chr4
strand: +
right_annotated: ENSG00000249693.2:THEGL:protein_coding:1793
samples:
,0:102,2:926,3:700,4:1438,5:1152,6:1172,7:202,8:1887,9:1810,10:1061,11:1462,12:2022,13:497,14:800,15:254,16:1361,17:1420


chrom: chr4
strand: +
right_annotated: ENSG00000248590.2:GLDCP1:transcribed_processed_pseudogene:2678
samples:
,0:51,1:7232,2:17436,3:18104,4:8818,5:28654,6:12987,7:14705,8:15262,9:19707,10:28423,11:17741,12:14553,13:15581,14:13163,15:6375,16:15646,17:11531


chrom: chr4
strand: -
right_annotated: ENSG00000171476.21:HOPX:protein_coding:7753
samples:
,2:429646,3:339551,4:246082,5:618742,6:300195,7:430331,8:378806,9:178841,10:547488,11:235112,12:315635,13:348395,14:246220,15:157439,16:316640,17:85403


chrom: chr4
strand: -
right_annotated: ENSG00000280285.1:RP11-630A13.4:TEC:3226
samples:
,2:5589,3:7739,4:2444,5:9236,6:1698,7:3900,8:3898,9:3069,10:12683,11:12513,12:19729,13:14011,14:12880,15:15744,16:18522,17:6679


chrom: chr4
strand: +
right_annotated: ENSG00000084093.15:REST:protein_coding:7955
samples:
,0:70463,1:23049,2:233227,3:248652,4:190910,5:321938,6:100544,7:193174,8:119552,9:61778,10:700477,11:497781,12:393512,13:365863,14:222824,15:221863,16:231335,17:57192


chrom: chr4
strand: -
right_annotated: ENSG00000269949.1:RP11-738E22.3:lincRNA:447
samples:
,0:78,2:1711,3:3642,4:2063,5:4488,6:3748,7:6574,8:1266,9:3645,10:6976,11:6826,12:5549,13:8476,14:9553,15:5625,16:9621,17:4850


chrom: chr4
strand: -
right_annotated: ENSG00000084092.6:NOA1:protein_coding:3415
samples:
,0:25263,1:16189,2:572524,3:361466,4:417180,5:565629,6:536223,7:414803,8:550593,9:278525,10:457732,11:336740,12:423780,13:436727,14:429416,15:234915,16:482788,17:208533


chrom: chr4
strand: +
right_annotated: ENSG00000047315.14:POLR2B:protein_coding:5901
samples:
,0:255307,1:156224,2:2276204,3:3573992,4:2231954,5:5036606,6:2609608,7:3419144,8:2895526,9:2559458,10:5188280,11:3207245,12:4250019,13:3492386,14:3859412,15:1858869,16:3508791,17:1348091


chrom: chr4
strand: +
right_annotated: ENSG00000251703.1:RNU6-998P:snRNA:101
samples:
,0:43,1:69,2:183,3:211,4:172,5:583,6:133,7:201,8:31,9:129,10:5688,11:4173,12:5192,13:3025,14:4329,15:1786,16:3598,17:848


chrom: chr4
strand: -
right_annotated: ENSG00000163453.11:IGFBP7:protein_coding:1930
samples:
,0:1366707,1:89672,2:357933,3:301299,4:297741,5:417396,6:466998,7:391927,8:428241,9:273747,10:464259,11:297112,12:265729,13:400958,14:309052,15:209171,16:351565,17:218205


chrom: chr4
strand: +
right_annotated: ENSG00000245067.6:IGFBP7-AS1:antisense:1740
samples:
,0:170176,1:9584,2:56236,3:9635,4:39131,5:15650,6:68321,7:10741,8:45996,9:8033,10:20262,11:6761,12:12146,13:24869,14:17580,15:10022,16:24326,17:24983


chrom: chr4
strand: +
right_annotated: ENSG00000150471.16:ADGRL3:protein_coding:13991
samples:
,1:811,2:743390,3:1764878,4:2586668,5:3108942,6:3576650,7:3043008,8:2753914,9:3535721,10:2691075,11:4216684,12:8319132,13:4227139,14:9888224,15:4500286,16:7251743,17:4277860


chrom: chr4
strand: +
right_annotated: ENSG00000241261.1:RPL17P19:processed_pseudogene:552
samples:
,3:360,4:254,5:555,6:80,7:778,8:327,9:202,10:46552,11:100873,12:189152,13:67366,14:152792,15:83672,16:131565,17:66577


chrom: chr4
strand: -
right_annotated: ENSG00000205682.2:RP11-798L4.1:lincRNA:2079
samples:
,2:481,3:437,4:644,5:713,6:1029,7:471,8:99,9:161,10:41434,11:84726,12:121291,13:58384,14:117780,15:80681,16:112182,17:67978


chrom: chr4
strand: -
right_annotated: ENSG00000226439.3:RP11-621K7.1:processed_pseudogene:402
samples:
,0:4379,1:1261,2:283,3:816,4:296,5:768,6:660,7:386,8:215,9:261,10:5047,11:16417,12:19421,13:11448,14:17463,15:16821,16:14335,17:9248


chrom: chr4
strand: -
right_annotated: ENSG00000248692.5:ADGRL3-AS1:antisense:947
samples:
,2:658,3:3880,4:6840,5:5059,6:5262,7:4897,8:3153,9:9694,10:6377,11:18438,12:12165,13:10593,14:12718,15:10990,16:11969,17:11880


chrom: chr4
strand: -
right_annotated: ENSG00000225405.3:RPS15AP17:processed_pseudogene:390
samples:
,0:471,1:608,2:770,3:848,4:659,5:519,6:521,7:378,8:848,9:559,10:3035,11:2677,12:3049,13:1608,14:2561,15:599,16:1572,17:1504


chrom: chr4
strand: +
right_annotated: ENSG00000180673.9:EXOC5P1:processed_pseudogene:1969
samples:
,0:16565,1:6689,2:40108,3:76788,4:61322,5:118601,6:49607,7:66962,8:47128,9:48467,10:145461,11:117330,12:177183,13:115250,14:148564,15:62576,16:100304,17:44739


chrom: chr4
strand: +
right_annotated: ENSG00000231442.3:LARP1BP1:processed_pseudogene:1359
samples:
,2:225,3:283,4:390,5:68,6:67,7:442,8:317,9:256,10:679,11:950,12:467,13:1580,14:1225,15:1184,16:1436,17:1083


chrom: chr4
strand: -
right_annotated: ENSG00000205678.7:TECRL:protein_coding:6023
samples:
,2:236,3:4812,4:8360,5:2016,6:997,7:794,8:1813,9:1111,10:15496,11:14284,12:10704,13:145,14:1847,15:873,16:2968,17:1225


chrom: chr4
strand: -
right_annotated: ENSG00000250125.1:RP11-707A18.1:lincRNA:4079
samples:
,2:2801,3:14933,4:12784,5:3469,6:5672,7:5096,8:5274,9:72181,10:43100,11:26050,12:24236,13:3509,14:15377,15:5162,16:14334,17:73492


chrom: chr4
strand: -
right_annotated: ENSG00000145242.13:EPHA5:protein_coding:9833
samples:
,1:285,2:2590547,3:3063036,4:2974978,5:3917847,6:2385452,7:3383523,8:2788010,9:2143003,10:7224887,11:7046908,12:7676135,13:5359680,14:5842985,15:4642360,16:6008366,17:2422697


chrom: chr4
strand: +
right_annotated: ENSG00000243199.1:RP11-408P14.1:processed_pseudogene:870
samples:
,0:126444,1:83035,2:971641,3:1192844,4:922812,5:1496045,6:1189978,7:1135894,8:1109136,9:505523,10:1775121,11:888363,12:1300823,13:980947,14:1090983,15:505643,16:898353,17:234304


chrom: chr4
strand: +
right_annotated: ENSG00000250846.6:EPHA5-AS1:lincRNA:1258
samples:
,1:102,2:405266,3:157512,4:343259,5:296990,6:251375,7:196656,8:275052,9:145593,10:482199,11:467180,12:609327,13:505769,14:476421,15:500675,16:563664,17:245663


chrom: chr4
strand: +
right_annotated: ENSG00000248479.1:RP11-807H7.2:lincRNA:385
samples:
,2:15037,3:26855,4:10915,5:37640,6:14745,7:23646,8:16599,9:11155,10:36553,11:27315,12:20560,13:21835,14:20501,15:17494,16:28033,17:4601


chrom: chr4
strand: +
right_annotated: ENSG00000251527.1:RP11-51P8.1:lincRNA:768
samples:
,2:69,3:202,4:436,5:269,6:202,7:202,8:336,9:101,10:100,11:404,12:369,13:850,14:910,15:371,16:241,17:199


chrom: chr4
strand: +
right_annotated: ENSG00000244099.1:RPS23P3:processed_pseudogene:430
samples:
,0:80,2:228,3:274,5:155,6:266,7:286,8:239,9:201,10:1208,11:414,12:462,13:633,14:548,15:319,16:768,17:326


chrom: chr4
strand: -
right_annotated: ENSG00000250075.5:RP11-584P21.2:lincRNA:2286
samples:
,0:45,2:2657,3:2441,4:514,5:2181,6:2165,7:3016,8:2329,9:2476,10:4828,11:4640,12:2406,13:2343,14:5612,15:5170,16:4990,17:3904


chrom: chr4
strand: +
right_annotated: ENSG00000274759.1:5S_rRNA:rRNA:127
samples:
,2:243,3:878,4:31,5:581,6:526,7:1082,8:736,9:995,10:1544,11:1689,12:1608,13:819,14:1923,15:1007,16:3138,17:2236


chrom: chr4
strand: +
right_annotated: ENSG00000250030.2:RP11-584P21.4:processed_pseudogene:308
samples:
,0:1191,1:1210,2:385,3:443,4:615,5:719,6:449,7:2207,8:479,9:1186,10:4340,11:5880,12:4877,13:4224,14:6854,15:4716,16:7014,17:5095


chrom: chr4
strand: -
right_annotated: ENSG00000145241.10:CENPC:protein_coding:8613
samples:
,0:24840,1:9456,2:231956,3:322076,4:236110,5:449835,6:206486,7:318491,8:245584,9:197423,10:1051239,11:735835,12:694592,13:637060,14:716140,15:524941,16:710610,17:290059


chrom: chr4
strand: +
right_annotated: ENSG00000035720.7:STAP1:protein_coding:1655
samples:
,2:366,3:1594,4:389,5:929,6:378,7:3435,8:257,9:1387,10:1505,11:1660,12:1899,13:1666,14:1217,15:1523,16:463,17:823


chrom: chr4
strand: -
right_annotated: ENSG00000279464.1:RP11-17P16.1:TEC:2458
samples:
,0:204,1:102,2:6609,3:12352,4:8442,5:10162,6:5750,7:9452,8:7925,9:9044,10:12432,11:21005,12:10641,13:10808,14:9962,15:8692,16:10287,17:7927


chrom: chr4
strand: -
right_annotated: ENSG00000033178.12:UBA6:protein_coding:11432
samples:
,0:225814,1:59494,2:830374,3:1837264,4:1078624,5:2035256,6:963745,7:1551851,8:1118697,9:1416284,10:3237618,11:2803859,12:2629910,13:2163606,14:2419654,15:1429504,16:2221881,17:1153813


chrom: chr4
strand: +
right_annotated: ENSG00000270257.1:RP11-17P16.2:processed_pseudogene:183
samples:
,0:260,2:591,3:1515,4:2303,5:1930,6:1771,7:1398,8:1769,9:1126,10:6438,11:8613,12:6120,13:4606,14:1797,15:4300,16:5677,17:4035


chrom: chr4
strand: +
right_annotated: ENSG00000248049.6:UBA6-AS1:antisense:5575
samples:
,0:11909,1:4251,2:172536,3:301796,4:265222,5:425486,6:341859,7:391302,8:372280,9:365353,10:544774,11:534840,12:635343,13:576853,14:664079,15:433384,16:631556,17:381342


chrom: chr4
strand: -
right_annotated: ENSG00000250656.2:ST3GAL1P1:processed_pseudogene:1014
samples:
,0:335,1:102,2:2057,3:2164,4:1040,5:2030,6:2261,7:1597,8:1938,9:1492,10:23120,11:26589,12:19694,13:13838,14:14323,15:11671,16:18324,17:14450


chrom: chr4
strand: -
right_annotated: ENSG00000270228.1:RP11-453E17.3:processed_pseudogene:2046
samples:
,0:5143,1:1548,2:48994,3:91448,4:87112,5:98165,6:117030,7:118012,8:126560,9:102096,10:122323,11:154646,12:173442,13:95490,14:155120,15:100664,16:166058,17:87736


chrom: chr4
strand: -
right_annotated: ENSG00000270292.1:RP11-453E17.4:processed_pseudogene:1213
samples:
,2:2865,3:7753,4:5319,5:5953,6:4703,7:9496,8:4437,9:9187,10:32424,11:44727,12:37194,13:18955,14:33264,15:32220,16:30770,17:23226


chrom: chr4
strand: -
right_annotated: ENSG00000109163.6:GNRHR:protein_coding:2164
samples:
,0:28,2:14981,3:29199,4:19643,5:47230,6:22932,7:34572,8:23205,9:59185,10:128849,11:174604,12:96928,13:93858,14:89329,15:68717,16:86092,17:74897


chrom: chr4
strand: +
right_annotated: ENSG00000202374.1:SNORA62:snoRNA:151
samples:
,2:227,3:209,4:182,5:172,6:452,7:578,8:509,10:10764,11:8506,12:5731,13:5258,14:4402,15:4288,16:3503,17:3924


chrom: chr4
strand: -
right_annotated: ENSG00000232398.1:TMPRSS11CP:unprocessed_pseudogene:683
samples:
,2:916,3:4769,4:2444,5:3981,6:2849,7:3265,8:1884,9:3351,10:28844,11:35321,12:19786,13:13458,14:11985,15:12376,16:13972,17:9462


chrom: chr4
strand: -
right_annotated: ENSG00000153802.11:TMPRSS11D:protein_coding:3294
samples:
,2:629,3:651,4:1407,5:981,6:1854,7:1681,8:737,9:431,10:128549,11:124229,12:80755,13:56265,14:43112,15:44230,16:54738,17:38999


chrom: chr4
strand: -
right_annotated: ENSG00000187054.15:TMPRSS11A:protein_coding:3970
samples:
,2:639,3:1580,4:1174,5:1291,6:737,7:572,8:419,9:346,10:71041,11:75329,12:40028,13:39757,14:19353,15:25207,16:29815,17:25197


chrom: chr4
strand: -
right_annotated: ENSG00000229009.7:TMPRSS11GP:transcribed_unprocessed_pseudogene:1269
samples:
,2:160,3:347,4:454,5:380,6:240,7:262,9:393,10:23623,11:17933,12:20570,13:15277,14:7964,15:6717,16:11788,17:8894


chrom: chr4
strand: +
right_annotated: ENSG00000227725.3:GCOM2:processed_pseudogene:1104
samples:
,0:10204,1:8762,2:27344,3:37710,4:31251,5:52771,6:30988,7:32081,8:30694,9:30238,10:50739,11:26704,12:40682,13:35645,14:34856,15:19082,16:40747,17:19624


chrom: chr4
strand: -
right_annotated: ENSG00000283131.1:RP11-35D5.4:unprocessed_pseudogene:773
samples:
,2:800,3:1710,4:1070,5:505,6:592,7:606,8:200,9:805,10:5047,11:6237,12:3427,13:4545,14:2162,15:2744,16:4094,17:2987


chrom: chr4
strand: -
right_annotated: ENSG00000198092.5:TMPRSS11F:protein_coding:2088
samples:
,2:2536,3:3161,4:2674,5:3403,6:1193,7:3734,8:1954,9:2691,10:11160,11:12746,12:6103,13:6253,14:3707,15:5305,16:7510,17:5556


chrom: chr4
strand: -
right_annotated: ENSG00000215127.6:SYT14P1:transcribed_processed_pseudogene:1448
samples:
,0:42,2:3253,3:4364,4:2491,5:6589,6:1665,7:3100,8:1918,9:5217,10:9658,11:9916,12:7433,13:7082,14:3450,15:3805,16:7012,17:3987


chrom: chr4
strand: -
right_annotated: ENSG00000083896.12:YTHDC1:protein_coding:7032
samples:
,0:75969,1:35102,2:1764942,3:1855687,4:1765480,5:3016550,6:1772191,7:2201047,8:2073008,9:1440899,10:2598431,11:1766272,12:2588357,13:2245380,14:2405355,15:1489114,16:2297394,17:857224


chrom: chr4
strand: +
right_annotated: ENSG00000162840.4:MT2P1:processed_pseudogene:183
samples:
,0:4839,1:376,2:1482,3:998,4:1504,5:2296,6:3342,7:1599,8:4066,9:698,10:1935,11:1093,12:297,13:804,14:398,15:403,16:2273,17:1100


chrom: chr4
strand: -
right_annotated: ENSG00000173597.8:SULT1B1:protein_coding:7356
samples:
,0:51,1:102,2:1873,3:3734,4:7071,5:13921,6:6019,7:11653,8:11888,9:16248,10:7305,11:8104,12:10083,13:9539,14:8471,15:12811,16:14406,17:9176


chrom: chr4
strand: -
right_annotated: ENSG00000109193.10:SULT1E1:protein_coding:2304
samples:
,2:14782,3:17826,4:12825,5:31200,6:9377,7:21542,8:16810,9:8174,10:29835,11:14101,12:12185,13:21574,14:8345,15:10189,16:18008,17:4308


chrom: chr4
strand: +
right_annotated: ENSG00000132467.3:UTP3:protein_coding:2073
samples:
,0:31879,1:12537,2:243145,3:370962,4:225040,5:443775,6:277158,7:315487,8:313575,9:278046,10:323772,11:211371,12:308039,13:227404,14:319311,15:166224,16:290609,17:132547


chrom: chr4
strand: -
right_annotated: ENSG00000272986.1:RP11-46J23.1:antisense:745
samples:
,1:204,2:16175,3:24305,4:10991,5:24640,6:13960,7:21710,8:18706,9:19821,10:21987,11:21706,12:18632,13:17870,14:16996,15:15272,16:29479,17:9529


chrom: chr4
strand: +
right_annotated: ENSG00000018189.12:RUFY3:protein_coding:8070
samples:
,0:45009,1:7955,2:1910146,3:3869980,4:2754836,5:5098973,6:3390455,7:4534416,8:3331751,9:4846925,10:7027679,11:5475361,12:6905224,13:5606458,14:8320670,15:4137442,16:7052919,17:3808686


chrom: chr4
strand: -
right_annotated: ENSG00000132463.13:GRSF1:protein_coding:7785
samples:
,0:187108,1:79659,2:778010,3:1232140,4:930433,5:1685719,6:828579,7:1365514,8:1052513,9:987883,10:1737827,11:1090785,12:1409741,13:1146205,14:1212064,15:785541,16:1301523,17:575170


chrom: chr4
strand: -
right_annotated: ENSG00000283313.1:U6:snRNA:83
samples:
,2:216,3:9,4:93,5:146,6:59,7:312,8:223,9:315,10:234,11:240,12:206,13:400,14:469,15:470,16:871,17:295


chrom: chr4
strand: +
right_annotated: ENSG00000173542.8:MOB1B:protein_coding:8801
samples:
,0:35816,1:9458,2:451764,3:848842,4:662039,5:1106143,6:542197,7:878855,8:555158,9:593181,10:1296089,11:1577363,12:1373959,13:1339205,14:1286650,15:1005324,16:1057891,17:646552


chrom: chr4
strand: +
right_annotated: ENSG00000156136.9:DCK:protein_coding:3227
samples:
,0:33730,1:20561,2:456923,3:567214,4:487235,5:766239,6:461695,7:644564,8:471027,9:544380,10:900753,11:649073,12:650387,13:609616,14:566571,15:400935,16:601159,17:350815


chrom: chr4
strand: +
right_annotated: ENSG00000080493.14:SLC4A4:protein_coding:8890
samples:
,0:7722,1:3725,2:70134,3:75573,4:92564,5:212317,6:123867,7:194491,8:261865,9:193089,10:189875,11:152079,12:236008,13:220577,14:289225,15:202206,16:498358,17:196508


chrom: chr4
strand: -
right_annotated: ENSG00000156140.9:ADAMTS3:protein_coding:7172
samples:
,0:2884,2:135447,3:84471,4:14364,5:84110,6:143241,7:162862,8:223596,9:235062,10:1879066,11:160660,12:48962,13:103807,14:335313,15:146810,16:513947,17:270618


chrom: chr4
strand: +
right_annotated: ENSG00000250877.1:RP11-373J21.1:antisense:425
samples:
,0:182,2:1556,3:484,5:1245,6:737,7:1421,8:2046,9:2384,10:33137,11:3160,12:1458,13:1057,14:4771,15:3044,16:8811,17:5129


chrom: chr4
strand: +
right_annotated: ENSG00000270665.1:HNRNPA1P67:processed_pseudogene:926
samples:
,0:249,1:203,2:1483,3:2037,4:1044,5:2218,6:1173,7:1547,8:1633,9:1429,10:2356,11:1631,12:2191,13:922,14:1585,15:617,16:1549,17:236


chrom: chr4
strand: -
right_annotated: ENSG00000163626.16:COX18:protein_coding:6976
samples:
,0:22955,1:14878,2:230218,3:268736,4:196180,5:331473,6:239483,7:294893,8:228387,9:220775,10:357935,11:240661,12:275859,13:262194,14:287397,15:171799,16:303842,17:161482


chrom: chr4
strand: -
right_annotated: ENSG00000132466.17:ANKRD17:protein_coding:12041
samples:
,0:109235,1:49598,2:2563396,3:2731321,4:2487596,5:4429159,6:2611349,7:2948447,8:3184372,9:2524261,10:4088047,11:3689191,12:4188355,13:3789313,14:4263376,15:3630354,16:4642842,17:2476293


chrom: chr4
strand: +
right_annotated: ENSG00000248641.1:HMGA1P2:processed_pseudogene:324
samples:
,0:5078,1:2165,2:99909,3:40531,4:56396,5:33878,6:54390,7:29191,8:44229,9:21443,10:77716,11:35869,12:56449,13:30085,14:44539,15:25609,16:27617,17:13679


chrom: chr4
strand: +
right_annotated: ENSG00000250220.1:RP11-692D12.1:antisense:685
samples:
,0:372,1:115,2:4485,3:1721,4:3804,5:2062,6:5804,7:1299,8:4425,9:1157,10:8836,11:10185,12:6254,13:4743,14:5353,15:5281,16:9863,17:3430


chrom: chr4
strand: +
right_annotated: ENSG00000221639.1:SNORA3:snoRNA:125
samples:
,1:25,2:718,3:994,4:294,5:393,6:309,7:226,8:291,9:58,10:3675,11:4975,12:3280,13:1688,14:1912,15:1500,16:2344,17:1109


chrom: chr4
strand: +
right_annotated: ENSG00000163631.16:ALB:protein_coding:3377
samples:
,2:928,3:5562,4:1597,5:1487,6:1615,7:3608,8:2398,9:2913,10:3826,11:1971,12:3876,13:1218,14:1836,15:1445,16:1599,17:419


chrom: chr4
strand: +
right_annotated: ENSG00000169429.10:CXCL8:protein_coding:2274
samples:
,0:2600,1:2461,4:800,5:3727,7:10628,8:798,9:404,10:200,11:202,12:600,13:4333,14:799,15:8366,16:2498,17:200


chrom: chr4
strand: -
right_annotated: ENSG00000249920.2:HNRNPA1P55:processed_pseudogene:955
samples:
,0:38,2:1723,3:1737,4:719,5:1897,6:1402,7:2052,8:1054,9:633,10:3237,11:1420,12:3308,13:1353,14:1527,15:964,16:1798,17:889


chrom: chr4
strand: -
right_annotated: ENSG00000163736.3:PPBP:protein_coding:715
samples:
,1:40,2:1394,3:4396,4:4382,5:5413,6:2781,7:2019,8:2958,9:1818,10:5275,11:3188,12:6045,13:2177,14:1197,15:1203,16:3268,17:101


chrom: chr4
strand: -
right_annotated: ENSG00000163735.6:CXCL5:protein_coding:2538
samples:
,0:356,1:85277,2:2428,3:1395,4:1639,5:746,6:2050,7:1005,8:1490,9:808,10:697,11:1305,12:790,13:1197,14:1685,15:566,16:1579,17:606


chrom: chr4
strand: -
right_annotated: ENSG00000163734.4:CXCL3:protein_coding:2219
samples:
,0:102,1:3224,2:600,3:301,4:1199,5:1101,7:202,8:1794,9:404,11:404,12:1198,13:404,14:1198,15:786,16:1066,17:534


chrom: chr4
strand: -
right_annotated: ENSG00000251017.1:RP11-629B11.4:processed_pseudogene:678
samples:
,0:490,1:204,2:44955,3:63864,4:53024,5:93344,6:78033,7:72318,8:52942,9:70390,10:69803,11:41509,12:89570,13:57762,14:103355,15:43470,16:70768,17:32453


chrom: chr4
strand: -
right_annotated: ENSG00000081041.8:CXCL2:protein_coding:1500
samples:
,1:3874,2:400,3:101,4:718,5:2122,6:725,7:1538,8:4627,9:909,10:400,11:606,12:1381,13:1010,14:1694,15:1701,16:5786,17:2498


chrom: chr4
strand: +
right_annotated: ENSG00000163738.18:MTHFD2L:protein_coding:9819
samples:
,0:5678,1:12300,2:107321,3:127239,4:135638,5:179912,6:125236,7:133834,8:114864,9:91295,10:351134,11:291502,12:277882,13:281387,14:227229,15:174178,16:233772,17:118434


chrom: chr4
strand: -
right_annotated: ENSG00000269559.2:RP11-629B11.5:antisense:1863
samples:
,0:886,1:1984,2:32101,3:4579,4:27497,5:9982,6:24574,7:7363,8:16548,9:5046,10:12508,11:5822,12:12113,13:18207,14:10238,15:8319,16:18636,17:7601


chrom: chr4
strand: +
right_annotated: ENSG00000182585.9:EPGN:protein_coding:1814
samples:
,0:379,1:19,2:268,3:767,4:43,5:691,7:419,8:392,9:202,10:1668,11:945,12:1337,13:1689,14:1261,15:582,16:1593,17:553


chrom: chr4
strand: +
right_annotated: ENSG00000124882.3:EREG:protein_coding:5717
samples:
,0:24158,1:46081,2:625,3:281,4:940,5:1082,6:706,7:1346,8:1527,9:575,10:1196,11:1323,12:2073,13:429,14:1321,15:2314,16:2953,17:946


chrom: chr4
strand: +
right_annotated: ENSG00000109321.10:AREG:protein_coding:1648
samples:
,0:255,1:26551,2:200,3:1613,4:286,5:3029,6:598,7:606,8:1401,9:202,10:657,11:404,13:2827,14:400,15:808,16:947,17:202


chrom: chr4
strand: -
right_annotated: ENSG00000174808.11:BTC:protein_coding:2816
samples:
,1:1695,2:3088,3:3834,4:399,5:1004,6:500,7:1773,8:1106,9:1039,10:10215,11:3120,12:2309,13:1612,14:368,15:564,16:1402,17:202


chrom: chr4
strand: +
right_annotated: ENSG00000169116.11:PARM1:protein_coding:5034
samples:
,1:1427,2:32594,3:57851,4:28490,5:352926,6:138554,7:141440,8:213741,9:208085,10:17299,11:45792,12:35352,13:199791,14:163956,15:92686,16:247540,17:141861


chrom: chr4
strand: -
right_annotated: ENSG00000163743.13:RCHY1:protein_coding:6565
samples:
,0:15864,1:8595,2:218478,3:442004,4:282191,5:630837,6:348788,7:476753,8:401427,9:374802,10:591470,11:588615,12:484260,13:600298,14:477825,15:347021,16:501799,17:328221


chrom: chr4
strand: +
right_annotated: ENSG00000174796.12:THAP6:protein_coding:7127
samples:
,0:13609,1:6544,2:139361,3:196249,4:161014,5:288804,6:171227,7:196548,8:209534,9:167179,10:241047,11:225453,12:201528,13:183477,14:210018,15:179309,16:215218,17:108904


chrom: chr4
strand: +
right_annotated: ENSG00000174792.10:C4orf26:protein_coding:2054
samples:
,2:589,3:3562,4:1700,5:3451,6:496,7:4413,8:1138,9:1869,10:437,11:1824,12:2410,13:1196,15:2581,16:1038,17:531


chrom: chr4
strand: -
right_annotated: ENSG00000138769.10:CDKL2:protein_coding:3781
samples:
,0:1457,1:1308,2:137291,3:270952,4:122916,5:467653,6:323149,7:375169,8:417473,9:652735,10:298048,11:346539,12:284917,13:439842,14:627548,15:334707,16:794100,17:503950


chrom: chr4
strand: -
right_annotated: ENSG00000138757.14:G3BP2:protein_coding:7183
samples:
,0:273012,1:152331,2:2432635,3:3876298,4:2814988,5:5163164,6:3016204,7:3724148,8:3210531,9:4008184,10:4954192,11:3838421,12:5296281,13:3905643,14:5366990,15:2482635,16:4503214,17:2346798


chrom: chr4
strand: -
right_annotated: ENSG00000201644.2:Y_RNA:misc_RNA:94
samples:
,0:79,1:101,2:88,3:144,4:16,5:359,6:150,7:213,8:144,9:315,10:1496,11:2143,12:2139,13:1514,14:988,15:2678,16:2189,17:1541


chrom: chr4
strand: +
right_annotated: ENSG00000138768.14:USO1:protein_coding:4588
samples:
,0:207346,1:69819,2:596162,3:863274,4:605536,5:1214680,6:575268,7:877407,8:637781,9:645964,10:1202569,11:866718,12:1033006,13:860689,14:930618,15:618701,16:931884,17:371726


chrom: chr4
strand: -
right_annotated: ENSG00000156194.17:PPEF2:protein_coding:4979
samples:
,0:146,2:2914,3:2437,4:2113,5:3852,6:1986,7:2774,8:2219,9:1383,10:2375,11:1955,12:2017,13:1906,14:3014,15:3514,16:3325,17:2344


chrom: chr4
strand: -
right_annotated: ENSG00000138744.14:NAAA:protein_coding:4459
samples:
,0:22671,1:8705,2:73100,3:88283,4:62568,5:146300,6:100237,7:130841,8:118630,9:162532,10:104314,11:62759,12:63385,13:102553,14:94142,15:70697,16:105107,17:95779


chrom: chr4
strand: -
right_annotated: ENSG00000198301.11:SDAD1:protein_coding:3491
samples:
,0:35816,1:12391,2:397572,3:659652,4:427611,5:850447,6:433333,7:624228,8:505095,9:474226,10:828705,11:607383,12:776291,13:664682,14:770149,15:421321,16:672030,17:290376


chrom: chr4
strand: +
right_annotated: ENSG00000279909.1:AC110615.1:protein_coding:1129
samples:
,0:10751,1:3848,2:131098,3:245932,4:135648,5:275287,6:145495,7:245223,8:159467,9:169398,10:264349,11:192840,12:246231,13:205480,14:239738,15:125936,16:215199,17:93335


chrom: chr4
strand: +
right_annotated: ENSG00000245928.2:RP11-630D6.5:antisense:1685
samples:
,0:64,1:18,2:690,3:574,4:753,5:298,6:724,7:533,8:289,9:461,10:6112,11:4552,12:3040,13:4442,14:2858,15:4172,16:3247,17:4131


chrom: chr4
strand: +
right_annotated: ENSG00000156219.16:ART3:protein_coding:3278
samples:
,2:4876,3:7950,4:9382,5:16620,6:16162,7:5007,8:2593,9:9130,10:2735,11:6078,12:14709,13:7283,14:19696,15:2988,16:3851,17:4198


chrom: chr4
strand: -
right_annotated: ENSG00000138750.14:NUP54:protein_coding:4062
samples:
,0:49702,1:27680,2:384344,3:656837,4:291781,5:759874,6:443088,7:496029,8:474938,9:370438,10:990314,11:650795,12:667687,13:683353,14:695520,15:344336,16:581161,17:220611


chrom: chr4
strand: -
right_annotated: ENSG00000138760.8:SCARB2:protein_coding:5685
samples:
,0:311086,1:57513,2:3968777,3:4973295,4:3523019,5:6759093,6:4099144,7:3938404,8:3453964,9:3522384,10:6340832,11:4338775,12:4864070,13:3976919,14:4623412,15:2236636,16:3780709,17:2042449


chrom: chr4
strand: +
right_annotated: ENSG00000189157.13:FAM47E:protein_coding:9508
samples:
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chrom: chr4
strand: +
right_annotated: ENSG00000272414.5:FAM47E-STBD1:protein_coding:3242
samples:
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chrom: chr4
strand: +
right_annotated: ENSG00000118804.8:STBD1:protein_coding:3420
samples:
,0:28817,1:7352,2:19738,3:18001,4:14871,5:37401,6:23484,7:29770,8:28112,9:41087,10:15574,11:12345,12:22487,13:21595,14:31207,15:15130,16:31001,17:26032


chrom: chr4
strand: -
right_annotated: ENSG00000163749.17:CCDC158:protein_coding:5860
samples:
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chrom: chr4
strand: +
right_annotated: ENSG00000249858.2:SNX5P1:processed_pseudogene:1041
samples:
,0:4888,1:5453,2:5352,3:6609,4:3646,5:11647,6:4796,7:7130,8:6091,9:4532,10:9469,11:9657,12:6692,13:8193,14:7371,15:5663,16:8849,17:8564


chrom: chr4
strand: +
right_annotated: ENSG00000138771.14:SHROOM3:protein_coding:13159
samples:
,0:121373,1:16169,2:1053474,3:841024,4:589025,5:844033,6:451969,7:479896,8:559320,9:283433,10:1797815,11:1091230,12:913387,13:594420,14:569721,15:456962,16:663589,17:314712


chrom: chr4
strand: +
right_annotated: ENSG00000231335.1:AC107072.2:sense_intronic:239
samples:
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chrom: chr4
strand: -
right_annotated: ENSG00000233860.1:RP11-359D14.2:antisense:555
samples:
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chrom: chr4
strand: -
right_annotated: ENSG00000224218.1:RP11-359D14.3:antisense:110
samples:
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chrom: chr4
strand: -
right_annotated: ENSG00000270244.1:RP11-123J14.4:processed_pseudogene:342
samples:
,2:197,3:716,5:394,6:978,7:160,8:720,9:1119,10:437,11:1151,12:124,13:404,14:1276,15:476,16:1512,17:176


chrom: chr4
strand: -
right_annotated: ENSG00000186212.3:SOWAHB:protein_coding:3220
samples:
,0:102,1:204,2:44547,3:48513,4:16245,5:26771,6:54065,7:33835,8:61938,9:92207,10:58053,11:49144,12:18119,13:23725,14:44337,15:16428,16:64211,17:53749


chrom: chr4
strand: +
right_annotated: ENSG00000138758.11:SEPT11:protein_coding:9787
samples:
,0:1093225,1:41286,2:5517998,3:7116440,4:4634541,5:9277930,6:4876774,7:5881797,8:5479049,9:5677314,10:9687519,11:7268912,12:6889117,13:6622613,14:7018330,15:4536328,16:6618817,17:3834033


chrom: chr4
strand: -
right_annotated: ENSG00000234036.4:TXNP6:processed_pseudogene:310
samples:
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chrom: chr4
strand: -
right_annotated: ENSG00000118816.9:CCNI:protein_coding:3741
samples:
,0:56447,1:21138,2:7310360,3:11562037,4:7778903,5:13313951,6:7880392,7:11457291,8:8160597,9:8527048,10:6792512,11:7200327,12:6206839,13:7503688,14:7208813,15:6234032,16:6503949,17:5358918


chrom: chr4
strand: -
right_annotated: ENSG00000214062.5:RPL7P17:processed_pseudogene:724
samples:
,0:253,1:239,2:503,3:902,4:468,5:739,6:595,7:970,8:1334,9:1419,10:11911,11:13429,12:10265,13:6846,14:8743,15:8247,16:8207,17:1765


chrom: chr4
strand: -
right_annotated: ENSG00000271676.1:RP11-1E1.2:processed_pseudogene:964
samples:
,0:2221,1:1081,2:6412,3:2744,4:5083,5:4541,6:8253,7:3925,8:6931,9:3709,10:3992,11:2876,12:5935,13:1895,14:5524,15:3001,16:7558,17:1357


chrom: chr4
strand: +
right_annotated: ENSG00000138764.13:CCNG2:protein_coding:7481
samples:
,0:23109,1:2821,2:1769457,3:2867041,4:2020082,5:3741572,6:1913022,7:2896203,8:2190212,9:1771926,10:2640785,11:2399456,12:2504202,13:2576409,14:2424971,15:1910574,16:2260249,17:999255


chrom: chr4
strand: +
right_annotated: ENSG00000156234.7:CXCL13:protein_coding:1431
samples:
,2:661,3:2472,4:1300,5:2921,6:200,7:2202,8:2213,9:1435,10:589,11:465,12:986,13:762,14:800,15:1578,16:1074,17:365


chrom: chr4
strand: -
right_annotated: ENSG00000138767.12:CNOT6L:protein_coding:9367
samples:
,0:13728,1:6461,2:371107,3:770027,4:486705,5:816114,6:363587,7:658817,8:396038,9:395708,10:1235019,11:1487148,12:1391052,13:1179265,14:1251675,15:891967,16:1118149,17:617475


chrom: chr4
strand: +
right_annotated: ENSG00000169288.17:MRPL1:protein_coding:1943
samples:
,0:22067,1:15936,2:186256,3:306854,4:220082,5:384171,6:222714,7:285236,8:233868,9:215357,10:386078,11:220963,12:309230,13:251529,14:286719,15:134708,16:252847,17:109695


chrom: chr4
strand: -
right_annotated: ENSG00000248926.1:RP11-777B9.1:processed_pseudogene:781
samples:
,2:500,4:774,5:888,6:204,7:202,8:1190,9:303,10:2784,11:2884,12:1745,13:2885,14:599,15:1524,16:1836,17:89


chrom: chr4
strand: -
right_annotated: ENSG00000248640.1:HNRNPA1P56:processed_pseudogene:954
samples:
,1:33,2:329,3:925,4:471,5:934,6:300,7:968,8:446,9:276,10:456,11:378,12:889,13:759,14:555,15:307,16:433,17:84


chrom: chr4
strand: +
right_annotated: ENSG00000138759.17:FRAS1:protein_coding:20379
samples:
,0:23678,1:9840,2:488320,3:408599,4:209668,5:1022264,6:469950,7:337506,8:254699,9:339707,10:202246,11:530958,12:348105,13:670045,14:610217,15:319090,16:376846,17:387583


chrom: chr4
strand: -
right_annotated: ENSG00000249565.2:SERBP1P5:processed_pseudogene:1181
samples:
,0:82095,1:39794,2:252445,3:223362,4:204137,5:415046,6:253119,7:251719,8:292954,9:189141,10:264895,11:177099,12:276142,13:248628,14:253307,15:163008,16:261019,17:111723


chrom: chr4
strand: +
right_annotated: ENSG00000138772.12:ANXA3:protein_coding:5123
samples:
,0:7032,1:82598,2:5731,3:6390,4:5905,5:20084,6:5059,7:9528,8:19129,9:9232,10:8290,11:3093,12:9989,13:12384,14:5833,15:3903,16:15013,17:4514


chrom: chr4
strand: +
right_annotated: ENSG00000251442.5:LINC01094:lincRNA:2951
samples:
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chrom: chr4
strand: +
right_annotated: ENSG00000138756.17:BMP2K:protein_coding:9938
samples:
,0:49332,1:10432,2:387277,3:529444,4:368388,5:718083,6:284944,7:475096,8:409215,9:287441,10:1050135,11:980835,12:940692,13:803410,14:687853,15:616294,16:832709,17:277504


chrom: chr4
strand: -
right_annotated: ENSG00000163291.14:PAQR3:protein_coding:12403
samples:
,0:45940,1:14649,2:660738,3:1051554,4:745639,5:1240210,6:621178,7:909016,8:624714,9:539244,10:1628472,11:1393643,12:1202903,13:1117168,14:944891,15:714332,16:874885,17:416564


chrom: chr4
strand: +
right_annotated: ENSG00000242175.3:RN7SL127P:misc_RNA:300
samples:
,0:1966,1:901,2:133,3:147,4:82,5:63,6:186,8:145,9:54,10:25638,11:8715,12:8104,13:4714,14:5947,15:2073,16:13122,17:882


chrom: chr4
strand: +
right_annotated: ENSG00000249307.5:LINC01088:antisense:3995
samples:
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chrom: chr4
strand: -
right_annotated: ENSG00000163297.16:ANTXR2:protein_coding:9864
samples:
,0:154492,1:896,2:523791,3:466166,4:248129,5:624599,6:190354,7:373770,8:362489,9:61076,10:1031709,11:678645,12:511559,13:553424,14:351871,15:345166,16:580410,17:46525


chrom: chr4
strand: +
right_annotated: ENSG00000236530.2:AC097711.1:processed_pseudogene:1591
samples:
,0:5920,1:5664,2:6403,3:2391,4:4452,5:4000,6:2084,7:3210,8:2670,9:1809,10:4103,11:2601,12:2121,13:446,14:1583,15:683,16:1869,17:100


chrom: chr4
strand: +
right_annotated: ENSG00000244002.1:RPSAP39:processed_pseudogene:883
samples:
,0:370,1:402,2:188,3:675,4:195,5:1087,6:579,7:202,8:364,10:587,11:359,12:396,13:448,14:399,15:202,16:239,17:194


chrom: chr4
strand: -
right_annotated: ENSG00000248719.1:RP11-377G16.2:antisense:566
samples:
,2:68494,3:23717,4:19755,5:34239,6:24479,7:31440,8:28603,9:23539,10:101876,11:65441,12:45294,13:36525,14:34407,15:28279,16:38979,17:15870


chrom: chr4
strand: +
right_annotated: ENSG00000152784.15:PRDM8:protein_coding:4588
samples:
,0:6948,2:8001826,3:2817021,4:2747165,5:2990592,6:1828336,7:1962001,8:2672464,9:844935,10:3305366,11:1807325,12:1271766,13:1610167,14:852593,15:1068554,16:1218017,17:496522


chrom: chr4
strand: +
right_annotated: ENSG00000138675.16:FGF5:protein_coding:5998
samples:
,0:38268,2:1000,3:5904,4:9848,5:8091,6:33544,7:5626,8:19409,9:54719,10:1625,11:9427,12:10927,13:7009,14:32225,15:6925,16:21281,17:47622


chrom: chr4
strand: +
right_annotated: ENSG00000197826.11:C4orf22:protein_coding:4478
samples:
,0:2413,2:282,3:637,4:1091,5:1190,6:1509,7:507,8:819,9:2771,10:4664,11:3143,12:3726,13:1387,14:6931,15:1564,16:5279,17:6091


chrom: chr4
strand: +
right_annotated: ENSG00000152785.6:BMP3:protein_coding:5734
samples:
,2:21084,3:29472,4:28671,5:57596,6:46533,7:42135,8:54180,9:42866,10:52359,11:74280,12:83775,13:91620,14:117054,15:59177,16:132692,17:54282


chrom: chr4
strand: -
right_annotated: ENSG00000138669.9:PRKG2:protein_coding:5116
samples:
,0:1202,1:1423,2:114105,3:373842,4:337179,5:222015,6:184005,7:236147,8:149224,9:222895,10:227865,11:562412,12:827185,13:248179,14:422334,15:261088,16:309751,17:196889


chrom: chr4
strand: -
right_annotated: ENSG00000138670.17:RASGEF1B:protein_coding:10183
samples:
,0:6,1:202,2:695380,3:834020,4:380494,5:822684,6:270347,7:402714,8:268231,9:136932,10:2561327,11:1247307,12:964647,13:796377,14:535854,15:403846,16:505174,17:114154


chrom: chr4
strand: +
right_annotated: ENSG00000250826.2:HNRNPA3P13:processed_pseudogene:1122
samples:
,0:130,1:27,2:1304,3:1008,4:200,5:994,6:620,7:571,8:610,9:377,10:1648,11:202,12:592,13:652,14:712,15:623,16:202,17:799


chrom: chr4
strand: -
right_annotated: ENSG00000273156.1:RP11-127B20.2:lincRNA:665
samples:
,0:102,1:43,2:3016,3:26049,4:5287,5:6694,6:4423,7:24147,8:5437,9:8511,10:37883,11:63620,12:29065,13:39750,14:36266,15:42991,16:37932,17:40738


chrom: chr4
strand: -
right_annotated: ENSG00000138668.18:HNRNPD:protein_coding:6981
samples:
,0:27760,1:21782,2:5249921,3:4989055,4:3899591,5:5755065,6:3387571,7:4284207,8:3463757,9:2179452,10:2181018,11:1813460,12:1778265,13:1778529,14:1857630,15:2229549,16:1307615,17:1018386


chrom: chr4
strand: +
right_annotated: ENSG00000272677.1:RP11-127B20.3:antisense:906
samples:
,0:512,2:18558,3:11779,4:17331,5:12672,6:21967,7:9157,8:18667,9:8719,10:33199,11:27797,12:29949,13:24299,14:25035,15:19530,16:34094,17:15130


chrom: chr4
strand: -
right_annotated: ENSG00000250325.1:IGBP1P4:processed_pseudogene:879
samples:
,0:251,1:131,2:2504,3:4334,4:2238,5:2879,6:2705,7:4915,8:3176,9:1490,10:5576,11:6740,12:4808,13:5718,14:7572,15:5979,16:9149,17:3731


chrom: chr4
strand: -
right_annotated: ENSG00000152795.17:HNRNPDL:protein_coding:5476
samples:
,0:226914,1:147286,2:9147418,3:9307786,4:6997951,5:12476064,6:7595304,7:8995168,8:9184308,9:6499369,10:11143958,11:6726337,12:8268592,13:7338600,14:7418585,15:4402474,16:7426789,17:3095294


chrom: chr4
strand: +
right_annotated: ENSG00000145293.15:ENOPH1:protein_coding:2025
samples:
,0:43925,1:29425,2:752805,3:747403,4:713260,5:1091736,6:907083,7:923612,8:1042420,9:876267,10:1089353,11:693815,12:871648,13:844057,14:824440,15:453637,16:990882,17:589389


chrom: chr4
strand: -
right_annotated: ENSG00000249242.7:TMEM150C:protein_coding:3671
samples:
,0:2656,1:1205,2:262507,3:701017,4:449711,5:1348258,6:1129028,7:1554504,8:1548344,9:2026977,10:285165,11:393212,12:498547,13:751870,14:1153202,15:726858,16:1419073,17:871624


chrom: chr4
strand: -
right_annotated: ENSG00000214988.4:RPL7AP26:processed_pseudogene:813
samples:
,0:105,1:129,2:6173,3:14642,4:10196,5:26067,6:28197,7:29805,8:32136,9:30121,10:7194,11:13241,12:10371,13:18124,14:23567,15:25535,16:29619,17:23023


chrom: chr4
strand: -
right_annotated: ENSG00000227304.3:RP11-791G16.2:transcribed_processed_pseudogene:1493
samples:
,0:3178,1:1727,2:13382,3:41695,4:25005,5:77751,6:62254,7:80634,8:79864,9:88819,10:22266,11:43059,12:33122,13:57829,14:81150,15:69776,16:92242,17:63080


chrom: chr4
strand: -
right_annotated: ENSG00000248113.2:RP11-791G16.4:processed_pseudogene:1268
samples:
,0:11234,1:5193,2:9543,3:17007,4:12415,5:29662,6:12924,7:16557,8:16630,9:18809,10:31611,11:23801,12:25251,13:23452,14:26910,15:13074,16:25909,17:12657


chrom: chr4
strand: -
right_annotated: ENSG00000231782.6:LINC00575:lincRNA:910
samples:
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chrom: chr4
strand: -
right_annotated: ENSG00000145284.11:SCD5:protein_coding:4292
samples:
,0:61166,1:6386,2:3727146,3:6576574,4:4743461,5:6885008,6:5862588,7:4946338,8:5382008,9:6479629,10:3595883,11:4858660,12:5038019,13:3978105,14:5128028,15:2713647,16:4622871,17:3658533


chrom: chr4
strand: +
right_annotated: ENSG00000270480.1:RP11-57B24.1:processed_pseudogene:732
samples:
,2:848,3:1812,4:1461,5:1606,6:3238,7:1855,8:2966,9:699,10:10340,11:26610,12:13151,13:14206,14:14732,15:18601,16:21093,17:18785


chrom: chr4
strand: -
right_annotated: ENSG00000138674.16:SEC31A:protein_coding:9145
samples:
,0:362452,1:45483,2:2101558,3:2199960,4:1997935,5:3677902,6:2521723,7:2611461,8:2876618,9:2260932,10:2572277,11:1847128,12:2289911,13:2119845,14:2321226,15:1736816,16:2440105,17:1176022


chrom: chr4
strand: -
right_annotated: ENSG00000251022.6:THAP9-AS1:antisense:4397
samples:
,0:31338,1:10157,2:601155,3:934252,4:749885,5:1408283,6:788415,7:1077598,8:752542,9:743696,10:1067470,11:633910,12:1012260,13:788112,14:950986,15:526716,16:708404,17:298327


chrom: chr4
strand: +
right_annotated: ENSG00000168152.12:THAP9:protein_coding:4332
samples:
,0:3228,1:3731,2:133493,3:200160,4:114451,5:292892,6:104420,7:185322,8:108446,9:82935,10:460850,11:271458,12:258908,13:253908,14:202616,15:139589,16:206910,17:55989


chrom: chr4
strand: -
right_annotated: ENSG00000189308.10:LIN54:protein_coding:6768
samples:
,0:41432,1:11884,2:265366,3:275033,4:251091,5:453213,6:226029,7:251403,8:240322,9:230745,10:831192,11:594414,12:630700,13:547026,14:561038,15:334316,16:550803,17:266234


chrom: chr4
strand: -
right_annotated: ENSG00000199530.1:Y_RNA:misc_RNA:108
samples:
,0:50,2:95,3:307,4:268,5:557,6:353,7:337,8:13,9:460,10:573,11:838,12:526,13:924,14:698,15:1226,16:422,17:1


chrom: chr4
strand: +
right_annotated: ENSG00000138663.8:COPS4:protein_coding:3566
samples:
,0:93221,1:26810,2:332742,3:615434,4:405198,5:795236,6:488330,7:658066,8:530851,9:557113,10:719122,11:431947,12:594761,13:497418,14:564618,15:280496,16:590049,17:269622


chrom: chr4
strand: -
right_annotated: ENSG00000145287.10:PLAC8:protein_coding:3853
samples:
,0:1290,1:472,2:1418,3:5604,4:1349,5:758,6:1057,7:2794,8:2461,9:1463,10:3244,11:3220,12:631,13:1140,14:596,15:406,16:2079,17:1235


chrom: chr4
strand: -
right_annotated: ENSG00000250057.1:RP11-576N17.5:lincRNA:394
samples:
,2:964,3:543,4:372,5:508,6:570,7:829,8:628,9:460,10:1379,11:1966,12:889,13:515,14:1334,15:758,16:1322,17:1209


chrom: chr4
strand: +
right_annotated: ENSG00000250677.1:RP11-576N17.2:processed_pseudogene:142
samples:
,2:385,3:640,4:505,5:991,6:559,7:350,8:205,9:94,10:2515,11:1898,12:659,13:444,14:806,15:1280,16:883,17:433


chrom: chr4
strand: +
right_annotated: ENSG00000248401.2:RP11-576N17.3:processed_pseudogene:1028
samples:
,0:102,2:923,3:606,4:434,5:881,6:1163,7:1007,8:1835,9:404,10:5891,11:12068,12:1698,13:3314,14:2466,15:3525,16:4427,17:3992


chrom: chr4
strand: -
right_annotated: ENSG00000173085.13:COQ2:protein_coding:2774
samples:
,0:17673,1:15224,2:163446,3:176752,4:105439,5:199176,6:96829,7:125767,8:114498,9:117293,10:236016,11:156194,12:159538,13:126930,14:129855,15:85263,16:137401,17:62389


chrom: chr4
strand: -
right_annotated: ENSG00000173083.14:HPSE:protein_coding:4721
samples:
,0:1122,1:1415,2:3530,3:7906,4:4028,5:27964,6:15275,7:25216,8:26413,9:7892,10:8159,11:5305,12:1815,13:15824,14:12240,15:14414,16:26610,17:5126


chrom: chr4
strand: -
right_annotated: ENSG00000163312.10:HELQ:protein_coding:3713
samples:
,0:17884,1:4428,2:103808,3:160128,4:98817,5:223755,6:113722,7:174118,8:153778,9:141213,10:263898,11:209858,12:185151,13:195161,14:218896,15:141223,16:225217,17:90081


chrom: chr4
strand: +
right_annotated: ENSG00000163319.10:MRPS18C:protein_coding:4866
samples:
,0:31544,1:21133,2:160146,3:262944,4:165311,5:358884,6:185320,7:219461,8:241883,9:208286,10:429267,11:349915,12:359876,13:326278,14:332395,15:206515,16:370354,17:153992


chrom: chr4
strand: -
right_annotated: ENSG00000163322.13:FAM175A:protein_coding:7777
samples:
,0:20212,1:14746,2:162598,3:267864,4:151846,5:353391,6:169679,7:233313,8:212452,9:185094,10:444474,11:383638,12:357918,13:353786,14:341618,15:225424,16:353509,17:149943


chrom: chr4
strand: +
right_annotated: ENSG00000213608.5:SLC25A14P1:processed_pseudogene:901
samples:
,0:78,2:1831,3:2802,4:943,5:1676,6:1167,7:1010,8:600,9:1312,10:9222,11:11085,12:4897,13:5683,14:7532,15:7567,16:7019,17:2241


chrom: chr4
strand: -
right_annotated: ENSG00000163623.9:NKX6-1:protein_coding:3086
samples:
,0:130,1:16,2:1192,3:532,4:400,5:2220,6:800,7:2148,8:2700,9:1212,10:755,13:606,14:500,15:404,16:1100,17:806


chrom: chr4
strand: -
right_annotated: ENSG00000258013.2:RPL3P13:processed_pseudogene:216
samples:
,2:1033,3:763,4:762,5:401,6:952,7:780,8:717,9:600,10:2110,11:1967,12:1509,13:2036,14:1446,15:478,16:1261,17:1081


chrom: chr4
strand: +
right_annotated: ENSG00000163624.5:CDS1:protein_coding:4461
samples:
,0:102,1:1398,2:87345,3:154844,4:73923,5:179452,6:102651,7:207055,8:164581,9:164660,10:113775,11:131837,12:93109,13:146090,14:133833,15:128613,16:185529,17:110773


chrom: chr4
strand: -
right_annotated: ENSG00000163625.15:WDFY3:protein_coding:16856
samples:
,0:68848,1:27631,2:2580306,3:2895714,4:2685048,5:5414504,6:2994637,7:3882383,8:3373225,9:2510217,10:5235160,11:5543485,12:5425827,13:4634979,14:5632840,15:4743701,16:5561577,17:2966703


chrom: chr4
strand: -
right_annotated: ENSG00000239466.3:RN7SL552P:misc_RNA:276
samples:
,0:432,1:28,2:38,3:413,5:396,6:238,7:904,8:263,9:170,10:7263,11:7351,12:6568,13:5661,14:4205,15:4969,16:6318,17:2677


chrom: chr4
strand: +
right_annotated: ENSG00000251260.1:WDFY3-AS1:antisense:493
samples:
,0:1951,1:1049,2:50226,3:41553,4:52601,5:118978,6:57355,7:72399,8:61369,9:48290,10:169752,11:170689,12:149360,13:146652,14:162522,15:138754,16:164840,17:85718


chrom: chr4
strand: +
right_annotated: ENSG00000180769.8:WDFY3-AS2:processed_transcript:6203
samples:
,0:2559,1:611,2:50314,3:77895,4:48142,5:99207,6:33297,7:54396,8:45219,9:36077,10:91972,11:70393,12:61867,13:67191,14:42214,15:35826,16:49318,17:22397


chrom: chr4
strand: +
right_annotated: ENSG00000138639.17:ARHGAP24:protein_coding:7908
samples:
,0:37930,1:3852,2:23949,3:16172,4:14458,5:43849,6:34455,7:39746,8:45954,9:34205,10:31745,11:20583,12:16479,13:29566,14:31450,15:29819,16:42053,17:17625


chrom: chr4
strand: -
right_annotated: ENSG00000273389.1:RP13-514E23.2:antisense:440
samples:
,0:5228,1:593,2:1812,3:1978,4:1337,5:6429,6:4353,7:4122,8:4944,9:4787,10:2922,11:1012,12:1964,13:4041,14:3175,15:3383,16:2929,17:1670


chrom: chr4
strand: -
right_annotated: ENSG00000261496.1:RP13-514E23.1:sense_overlapping:1579
samples:
,0:188,2:35112,3:52125,4:40603,5:100616,6:112558,7:131103,8:148837,9:152141,10:76641,11:57123,12:87366,13:98007,14:207117,15:104725,16:202775,17:118659


chrom: chr4
strand: -
right_annotated: ENSG00000109339.18:MAPK10:protein_coding:9816
samples:
,0:842,1:204,2:536644,3:592397,4:636542,5:1305392,6:1630791,7:1394188,8:1887505,9:1478117,10:1100579,11:820379,12:1176176,13:1205092,14:2526516,15:1194926,16:2620453,17:1145972


chrom: chr4
strand: +
right_annotated: ENSG00000250062.5:RP11-778J15.1:antisense:1100
samples:
,0:51,2:400,4:337,5:991,6:55,7:502,9:372,10:11776,11:16558,12:15199,13:9431,14:23814,15:20556,16:34391,17:16017


chrom: chr4
strand: +
right_annotated: ENSG00000163629.12:PTPN13:protein_coding:9496
samples:
,0:175458,1:32687,2:502375,3:531399,4:310689,5:1194519,6:921585,7:1557467,8:1884358,9:1547761,10:1843594,11:788150,12:692068,13:1323271,14:2111962,15:1829063,16:3662452,17:1487251


chrom: chr4
strand: -
right_annotated: ENSG00000145283.7:SLC10A6:protein_coding:1502
samples:
,0:723,2:72,3:202,4:200,5:699,6:400,7:2576,8:952,9:1592,10:937,11:30,12:407,13:584,14:543,15:808,16:1900,17:718


chrom: chr4
strand: +
right_annotated: ENSG00000243312.3:RP11-397E7.1:processed_pseudogene:861
samples:
,0:183,1:193,2:1606,3:2285,4:2364,5:1271,6:1948,7:1779,8:2381,9:532,10:5080,11:2887,12:3239,13:2671,14:2740,15:1467,16:4345,17:577


chrom: chr4
strand: -
right_annotated: ENSG00000163633.10:C4orf36:protein_coding:5270
samples:
,0:6496,1:4256,2:29864,3:16117,4:25393,5:27420,6:40529,7:27092,8:40603,9:28617,10:21581,11:11072,12:13288,13:15901,14:22664,15:12045,16:29641,17:14627


chrom: chr4
strand: +
right_annotated: ENSG00000250202.2:RP11-397E7.2:processed_pseudogene:315
samples:
,0:4159,1:2918,2:14638,3:3084,4:9390,5:3777,6:10709,7:2388,8:6099,9:1416,10:5109,11:2850,12:2805,13:4164,14:2536,15:2425,16:6740,17:2004


chrom: chr4
strand: -
right_annotated: ENSG00000251411.1:RP11-397E7.4:processed_pseudogene:1110
samples:
,0:583,1:344,3:6,4:96,5:12,6:290,7:211,8:366,9:14,10:622,11:587,12:189,13:101,14:308,15:88,16:400,17:225


chrom: chr4
strand: +
right_annotated: ENSG00000172493.20:AFF1:protein_coding:10733
samples:
,0:19723,1:12804,2:229406,3:237360,4:198767,5:426383,6:234294,7:327673,8:332141,9:159051,10:252181,11:225288,12:191581,13:181378,14:243500,15:301600,16:291389,17:110485


chrom: chr4
strand: -
right_annotated: ENSG00000235043.3:TECRP1:processed_pseudogene:445
samples:
,0:6568,1:6331,2:291417,3:206999,4:139094,5:243369,6:244193,7:192359,8:261871,9:131642,10:133373,11:89981,12:75518,13:86351,14:76342,15:53981,16:89937,17:55744


chrom: chr4
strand: -
right_annotated: ENSG00000145332.13:KLHL8:protein_coding:7354
samples:
,0:21206,1:19271,2:348454,3:534350,4:573702,5:1405247,6:926146,7:1256284,8:1086911,9:1011818,10:975396,11:901522,12:1238711,13:1787354,14:2134802,15:1396461,16:2390803,17:957653


chrom: chr4
strand: +
right_annotated: ENSG00000248196.1:RP11-476C8.2:processed_pseudogene:891
samples:
,2:1180,3:585,4:1404,5:5104,6:3999,7:3584,8:2269,9:2035,10:9460,11:10649,12:10852,13:17521,14:19451,15:14200,16:23897,17:9823


chrom: chr4
strand: +
right_annotated: ENSG00000248180.1:GAPDHP60:processed_pseudogene:995
samples:
,0:4372,1:2698,2:474,3:607,4:928,5:1196,6:1865,7:957,8:2613,9:701,10:22625,11:24864,12:25228,13:25743,14:34707,15:31175,16:50746,17:17541


chrom: chr4
strand: -
right_annotated: ENSG00000170509.11:HSD17B13:protein_coding:2397
samples:
,0:102,1:51,2:966,3:1848,4:1953,5:8144,6:7488,7:9415,8:5919,9:3270,10:599,11:3378,12:1826,13:6752,14:6216,15:4587,16:6984,17:3469


chrom: chr4
strand: -
right_annotated: ENSG00000255723.1:RP11-529H2.2:processed_transcript:349
samples:
,0:2040,1:3423,2:2931,3:9722,4:5888,5:23657,6:18066,7:20099,8:14991,9:12118,10:7978,11:7395,12:8273,13:16166,14:14036,15:8489,16:19786,17:5363


chrom: chr4
strand: -
right_annotated: ENSG00000198189.10:HSD17B11:protein_coding:2435
samples:
,0:25634,1:38308,2:47576,3:106416,4:87272,5:287083,6:225704,7:248566,8:234428,9:165245,10:118611,11:98319,12:138764,13:227820,14:301247,15:139465,16:307189,17:100977


chrom: chr4
strand: +
right_annotated: ENSG00000170502.12:NUDT9:protein_coding:3184
samples:
,0:19972,1:10966,2:245717,3:334570,4:250590,5:447771,6:293007,7:351219,8:341596,9:304602,10:313642,11:217018,12:356228,13:243485,14:317025,15:174261,16:305097,17:153661


chrom: chr4
strand: -
right_annotated: ENSG00000152583.12:SPARCL1:protein_coding:3477
samples:
,0:172,2:50465,3:100603,4:78299,5:126839,6:214754,7:238276,8:608035,9:920508,10:84282,11:87082,12:136718,13:72982,14:268468,15:127486,16:620334,17:417164


chrom: chr4
strand: +
right_annotated: ENSG00000152591.12:DSPP:protein_coding:4373
samples:
,2:2241,3:1530,4:1564,5:2675,6:891,7:2293,8:999,9:1615,10:2633,11:4036,12:6968,13:6823,14:6232,15:6851,16:9292,17:2412


chrom: chr4
strand: +
right_annotated: ENSG00000152592.13:DMP1:protein_coding:2682
samples:
,2:2200,3:2239,4:1600,5:3396,6:500,7:2782,8:1399,9:1211,10:2214,11:1591,12:1328,13:759,14:1418,15:402,16:200,17:202


chrom: chr4
strand: +
right_annotated: ENSG00000183199.6:HSP90AB3P:processed_pseudogene:2173
samples:
,0:76491,1:93154,2:117932,3:176905,4:110617,5:244329,6:152978,7:232930,8:179178,9:207482,10:164610,11:117312,12:134818,13:121338,14:141762,15:86015,16:141718,17:72477


chrom: chr4
strand: +
right_annotated: ENSG00000118785.13:SPP1:protein_coding:2321
samples:
,0:21592,1:138357,2:306948,3:144072,4:93988,5:2992368,6:1276691,7:2526036,8:3404238,9:108527,10:269001,11:121682,12:109697,13:1461318,14:984601,15:1053290,16:2013340,17:40370


chrom: chr4
strand: +
right_annotated: ENSG00000202000.1:RNU1-36P:snRNA:165
samples:
,0:14,2:935,3:2804,4:764,5:1501,6:975,7:2220,8:766,9:1184,10:1327,11:877,12:1261,13:1275,14:1260,15:1632,16:216,17:478


chrom: chr4
strand: +
right_annotated: ENSG00000118762.7:PKD2:protein_coding:5498
samples:
,0:347620,1:31475,2:491670,3:902518,4:594628,5:1092919,6:602110,7:791297,8:571306,9:492075,10:985533,11:741431,12:804083,13:771288,14:799622,15:546487,16:722550,17:311532


chrom: chr4
strand: -
right_annotated: ENSG00000118777.10:ABCG2:protein_coding:4848
samples:
,0:764,1:71271,2:46690,3:104357,4:42967,5:213838,6:129846,7:152385,8:197598,9:207027,10:137306,11:121112,12:117982,13:171104,14:217169,15:103045,16:277241,17:122401


chrom: chr4
strand: -
right_annotated: ENSG00000163644.14:PPM1K:protein_coding:11371
samples:
,0:24129,1:2270,2:622053,3:1372636,4:927537,5:1499428,6:885733,7:1615105,8:910183,9:1398558,10:1854218,11:1703048,12:1628577,13:1436504,14:1741767,15:1072936,16:1621136,17:1006571


chrom: chr4
strand: -
right_annotated: ENSG00000200469.1:RNU6-112P:snRNA:104
samples:
,2:1098,3:1223,4:2949,5:2467,6:1148,7:2117,8:961,9:2301,10:6535,11:11961,12:4283,13:5917,14:4974,15:6138,16:3264,17:3774


chrom: chr4
strand: +
right_annotated: ENSG00000246375.2:RP11-10L7.1:lincRNA:1654
samples:
,0:102,2:16854,3:3834,4:1124,5:16136,6:3896,7:1756,8:3329,9:6708,10:30139,11:3064,12:3049,13:9499,14:4120,15:3304,16:3668,17:3854


chrom: chr4
strand: +
right_annotated: ENSG00000138642.14:HERC6:protein_coding:5793
samples:
,0:7314,1:5709,2:49486,3:72774,4:29481,5:96550,6:37574,7:55977,8:53514,9:17703,10:83737,11:58301,12:39617,13:56548,14:47873,15:29707,16:61228,17:11117


chrom: chr4
strand: +
right_annotated: ENSG00000138646.8:HERC5:protein_coding:4766
samples:
,0:1325,1:6075,2:9645,3:22287,4:9453,5:26646,6:18617,7:26363,8:21872,9:3232,10:32906,11:21626,12:23211,13:20845,14:35410,15:15948,16:33524,17:3166


chrom: chr4
strand: -
right_annotated: ENSG00000249934.2:RP11-466G12.3:processed_pseudogene:1813
samples:
,0:161,1:34,2:298,3:909,4:800,5:1206,6:600,7:1247,8:1542,9:1161,10:2504,11:2500,12:1799,13:3790,14:3544,15:1901,16:3507,17:1650


chrom: chr4
strand: -
right_annotated: ENSG00000145337.4:PYURF:protein_coding:1361
samples:
,0:60678,1:31141,2:465579,3:640465,4:531577,5:741115,6:507081,7:651168,8:502758,9:431427,10:645314,11:406988,12:453305,13:478797,14:400919,15:235564,16:419429,17:236973


chrom: chr4
strand: +
right_annotated: ENSG00000138641.15:HERC3:protein_coding:8634
samples:
,0:85621,1:34052,2:1303592,3:1806909,4:1476295,5:2486904,6:1372563,7:2302678,8:1674991,9:2029405,10:2117404,11:2056963,12:1951033,13:1834680,14:1628643,15:1672487,16:1850420,17:1326565


chrom: chr4
strand: -
right_annotated: ENSG00000255072.1:PIGY:protein_coding:217
samples:
,0:9921,1:6331,2:64507,3:168765,4:73643,5:198430,6:100794,7:157483,8:100577,9:109174,10:119243,11:81232,12:73697,13:109681,14:59899,15:38969,16:73278,17:36651


chrom: chr4
strand: +
right_annotated: ENSG00000249755.2:RP11-466G12.2:processed_pseudogene:657
samples:
,0:204,2:839,3:1116,4:770,5:1592,6:1377,7:1388,8:2775,9:1236,10:802,11:1513,12:1035,13:821,14:1043,15:1037,16:1301,17:984


chrom: chr4
strand: -
right_annotated: ENSG00000252322.1:RN7SKP244:misc_RNA:307
samples:
,2:379,3:42,4:31,5:153,6:200,7:777,8:183,9:363,10:887,11:668,12:444,13:566,14:991,15:686,16:1392,17:1777


chrom: chr4
strand: -
right_annotated: ENSG00000207524.1:RNU6-33P:snRNA:107
samples:
,0:20208,1:23328,2:5161,3:6811,4:6430,5:10637,6:6936,7:4174,8:7555,9:8943,10:29459,11:19594,12:34107,13:19890,14:44799,15:16601,16:45943,17:14676


chrom: chr4
strand: -
right_annotated: ENSG00000177432.6:NAP1L5:protein_coding:2321
samples:
,0:11896,1:710,2:302850,3:394315,4:459397,5:472104,6:690382,7:430964,8:632402,9:710081,10:377106,11:293901,12:502759,13:337581,14:606311,15:225923,16:557181,17:412160


chrom: chr4
strand: +
right_annotated: ENSG00000248019.2:FAM13A-AS1:antisense:4510
samples:
,0:3631,1:2409,2:368312,3:550962,4:353619,5:702247,6:400337,7:685607,8:528020,9:325534,10:543719,11:550037,12:481612,13:476032,14:389574,15:468067,16:515384,17:219600


chrom: chr4
strand: +
right_annotated: ENSG00000278151.1:FAM13A-AS1_1:misc_RNA:119
samples:
,0:54,2:4286,3:8559,4:3934,5:12976,6:2300,7:13510,8:5857,9:8569,10:11143,11:15717,12:6854,13:6449,14:5845,15:13591,16:10144,17:6714


chrom: chr4
strand: +
right_annotated: ENSG00000276003.1:FAM13A-AS1_2:misc_RNA:108
samples:
,0:30,2:5502,3:10038,4:3870,5:10702,6:4526,7:13329,8:7059,9:6341,10:6493,11:9182,12:3346,13:4710,14:3545,15:4494,16:5841,17:2384


chrom: chr4
strand: -
right_annotated: ENSG00000138640.14:FAM13A:protein_coding:13215
samples:
,0:25676,1:13768,2:1147001,3:1585323,4:1347798,5:2799157,6:1277247,7:2170759,8:1773664,9:856513,10:1979862,11:1728736,12:2221769,13:2113604,14:1629248,15:1613373,16:1949315,17:587007


chrom: chr4
strand: +
right_annotated: ENSG00000180346.3:TIGD2:protein_coding:3217
samples:
,0:12463,1:8789,2:95230,3:136666,4:106758,5:186488,6:107662,7:145857,8:106358,9:100352,10:226566,11:184548,12:233732,13:165107,14:214477,15:120561,16:190257,17:93730


chrom: chr4
strand: +
right_annotated: ENSG00000270720.1:RP11-84C13.2:lincRNA:588
samples:
,0:159,1:102,2:969,3:5423,4:1758,5:3512,6:1400,7:3463,8:2312,9:3769,10:7375,11:8774,12:8215,13:6020,14:8695,15:5702,16:7249,17:5164


chrom: chr4
strand: -
right_annotated: ENSG00000185477.4:GPRIN3:protein_coding:15205
samples:
,0:101,1:35456,2:384144,3:665096,4:708601,5:946610,6:1231090,7:890109,8:732546,9:1151524,10:1194606,11:1404691,12:1974492,13:1380347,14:3201506,15:1290158,16:2218809,17:1522044


chrom: chr4
strand: +
right_annotated: ENSG00000251095.6:RP11-115D19.1:antisense:6069
samples:
,1:125,2:49499,3:71403,4:40175,5:111832,6:119707,7:244536,8:222708,9:336038,10:171251,11:53033,12:53081,13:80904,14:108487,15:107523,16:184559,17:195151


chrom: chr4
strand: -
right_annotated: ENSG00000145335.15:SNCA:protein_coding:4014
samples:
,0:102,1:408,2:305306,3:291069,4:242574,5:513761,6:673340,7:941949,8:1095911,9:1669740,10:881590,11:273857,12:325722,13:379222,14:751327,15:552496,16:1059539,17:960424


chrom: chr4
strand: +
right_annotated: ENSG00000277695.1:RP11-115D19.4:antisense:522
samples:
,2:100,3:104,4:451,5:236,6:290,7:47,8:150,9:707,10:7349,11:5255,12:1865,13:1176,14:2970,15:5302,16:4826,17:5717


chrom: chr4
strand: +
right_annotated: ENSG00000276542.1:RP11-115D19.2:antisense:872
samples:
,3:202,5:760,6:400,7:872,8:1000,9:390,10:12090,11:7911,12:4256,13:2626,14:5105,15:7608,16:8361,17:6924


chrom: chr4
strand: +
right_annotated: ENSG00000247775.2:SNCA-AS1:antisense:2990
samples:
,2:791,3:1054,4:439,5:3721,6:5440,7:2453,8:2995,9:6675,10:6045,11:2215,12:2567,13:3901,14:8186,15:3716,16:6419,17:4447


chrom: chr4
strand: +
right_annotated: ENSG00000138722.9:MMRN1:protein_coding:5510
samples:
,2:19279,3:18057,4:10193,5:51862,6:18425,7:95114,8:25383,9:12589,10:46144,11:25134,12:20243,13:38352,14:34890,15:56960,16:33267,17:6381


chrom: chr4
strand: +
right_annotated: ENSG00000184305.14:CCSER1:protein_coding:10428
samples:
,1:51,2:118442,3:200272,4:154162,5:300500,6:183386,7:199544,8:171502,9:181987,10:1801804,11:1725239,12:1618901,13:1139958,14:1752464,15:929286,16:1610325,17:821280


chrom: chr4
strand: -
right_annotated: ENSG00000187653.11:TMSB4XP8:processed_pseudogene:135
samples:
,0:426677,1:259950,2:1242959,3:1727993,4:1102834,5:2641054,6:1307662,7:1659696,8:1605771,9:1127461,10:1580464,11:1104191,12:1049999,13:1516222,14:790866,15:418065,16:936898,17:458812


chrom: chr4
strand: -
right_annotated: ENSG00000248984.1:AC004054.1:antisense:270
samples:
,3:114,4:69,6:78,7:72,8:92,9:73,10:24785,11:32360,12:21292,13:13942,14:14524,15:18987,16:18222,17:14718


chrom: chr4
strand: +
right_annotated: ENSG00000279013.1:RP11-254A24.2:TEC:2018
samples:
,2:19187,3:31548,4:27573,5:38406,6:27827,7:35028,8:23241,9:30830,10:80417,11:73555,12:67719,13:57305,14:83426,15:47654,16:63214,17:43052


