DataSource:Type snaptron_id chromosome start end length strand annotated left_motif right_motif left_annotated right_annotated samples samples_count coverage_sum coverage_avg coverage_median source_dataset_id TCGA:I 14733977 chr17 42559087 43047242 488156 + 0 GC AG 0 0 ,71015:1 1 1 1.000 1.000 4 TCGA:I 14734722 chr17 42562691 43047343 484653 - 0 GT AG 0 0 ,63776:1 1 1 1.000 1.000 4 TCGA:I 14736752 chr17 42571363 43054985 483623 + 0 GT AG 0 0 ,64470:1 1 1 1.000 1.000 4 TCGA:I 14736754 chr17 42571376 43054998 483623 - 0 GC AG 0 0 ,64470:1 1 1 1.000 1.000 4 TCGA:I 14736781 chr17 42571640 43046810 475171 + 0 GC AG 0 0 ,68376:1 1 1 1.000 1.000 4 TCGA:I 14737469 chr17 42575925 43071911 495987 + 0 GC AG 0 0 ,60475:1,62101:1,64389:1,65091:1,65104:1,65145:1,67165:1,69005:1,70080:1,70751:1 10 10 1.000 1.000 4 TCGA:I 14737517 chr17 42577266 43074341 497076 - 0 GC AG 0 0 ,65701:1 1 1 1.000 1.000 4 TCGA:I 14737609 chr17 42579029 43050393 471365 + 0 GT AG 0 0 ,66927:1 1 1 1.000 1.000 4 TCGA:I 14737911 chr17 42579881 43061291 481411 - 0 GC AG 0 0 ,64177:1 1 1 1.000 1.000 4 TCGA:I 14738106 chr17 42580299 43045372 465074 + 0 GT AG 0 0 ,63980:1 1 1 1.000 1.000 4 TCGA:I 14738280 chr17 42580705 43048823 468119 - 0 GC AG 0 0 ,66053:1,66461:1 2 2 1.000 1.000 4 TCGA:I 14738431 chr17 42581012 43050585 469574 - 0 GC AG 0 0 ,62892:1 1 1 1.000 1.000 4 TCGA:I 14738530 chr17 42581266 43059361 478096 + 0 GC AG 0 0 ,59999:1 1 1 1.000 1.000 4 TCGA:I 14738543 chr17 42581272 43059367 478096 + 0 GC AG 0 0 ,59999:1 1 1 1.000 1.000 4 TCGA:I 14738590 chr17 42581447 43079329 497883 + 0 GC AG 0 0 ,66337:1 1 1 1.000 1.000 4 TCGA:I 14738622 chr17 42581510 43052751 471242 - 0 GT AG 0 0 ,60575:1 1 1 1.000 1.000 4 TCGA:I 14739160 chr17 42587767 43069405 481639 + 0 AT AC 0 0 ,70453:1 1 1 1.000 1.000 4 TCGA:I 14739161 chr17 42587769 43069407 481639 - 0 AT AC 0 0 ,70453:1 1 1 1.000 1.000 4 TCGA:I 14739172 chr17 42587865 43047642 459778 - 0 GT AG aC19,cG19,cG38,gC19,gC38,kG19,kG38,mG19,mG38,rG19,rG38,sG19,sG38 aC19,cG19,cG38,gC19,gC38,kG19,kG38,mG19,mG38,rG19,rG38,sG19,sG38,vG19 ,68877:2 1 2 2.000 2.000 4 TCGA:I 14739246 chr17 42588626 43072841 484216 + 0 GC AG 0 0 ,65856:1 1 1 1.000 1.000 4 TCGA:I 14739355 chr17 42590454 43065450 474997 - 0 GT AG 0 0 ,69701:1 1 1 1.000 1.000 4 TCGA:I 14739802 chr17 42596993 43047219 450227 - 0 GC AG 0 0 ,65407:1,66888:1,68505:1 3 3 1.000 1.000 4 TCGA:I 14739894 chr17 42599419 43090216 490798 - 0 GC AG 0 0 ,67101:1 1 1 1.000 1.000 4 TCGA:I 14739896 chr17 42599424 43090221 490798 + 0 GT AG 0 0 ,67101:1 1 1 1.000 1.000 4 TCGA:I 14740041 chr17 42602459 43096736 494278 + 0 AT AC 0 0 ,66717:1 1 1 1.000 1.000 4 TCGA:I 14740087 chr17 42604865 43066811 461947 - 0 GT AG 0 0 ,65158:1 1 1 1.000 1.000 4 TCGA:I 14740111 chr17 42605907 43087578 481672 - 0 GC AG 0 0 ,64150:1 1 1 1.000 1.000 4 TCGA:I 14740123 chr17 42606574 43057808 451235 - 0 GC AG 0 0 ,69376:1 1 1 1.000 1.000 4 TCGA:I 14740155 chr17 42607592 43060418 452827 - 0 GT AG 0 0 ,62594:1,64137:2,65430:1,67926:1 4 5 1.250 1.000 4 TCGA:I 14740162 chr17 42607736 43072318 464583 + 0 GC AG 0 0 ,60378:1 1 1 1.000 1.000 4 TCGA:I 14740165 chr17 42607742 43072324 464583 + 0 GT AG 0 0 ,60378:1 1 1 1.000 1.000 4 TCGA:I 14740285 chr17 42610057 43092346 482290 - 0 GT AG 0 0 ,70029:1 1 1 1.000 1.000 4 TCGA:I 14740707 chr17 42612136 43086937 474802 + 0 GT AG 0 0 ,60233:1,61744:1,62341:1,65021:1,65518:1,66380:1,69170:3 7 9 1.286 1.000 4 TCGA:I 14740750 chr17 42612144 43086945 474802 + 0 GT AG aC19,cG19,cG38,gC19,gC38,kG19,kG38,mG19,mG38,rG19,rG38,sG19,sG38 0 ,60233:1,62341:1,65021:1,65518:1,66380:1,69170:3 6 8 1.333 1.000 4 TCGA:I 14742703 chr17 42615015 43102738 487724 + 0 AT AC 0 0 ,62055:1,68693:1 2 2 1.000 1.000 4 TCGA:I 14742875 chr17 42615930 43078129 462200 + 0 GC AG 0 0 ,63994:1 1 1 1.000 1.000 4 TCGA:I 14742886 chr17 42616268 43056218 439951 + 0 GC AG 0 0 ,62304:1 1 1 1.000 1.000 4 TCGA:I 14742895 chr17 42617425 43101597 484173 + 0 GT AG 0 0 ,64368:1,69998:1 2 2 1.000 1.000 4 TCGA:I 14742926 chr17 42621033 43048657 427625 + 0 GC AG 0 0 ,61387:1,61429:1,64089:1,66037:1,67092:1,67213:1,68142:1 7 7 1.000 1.000 4 TCGA:I 14742929 chr17 42621065 43093510 472446 + 0 GT AG 0 0 ,60216:1,62023:1,63379:1,63464:1,64197:1,64746:1,64871:1,65984:1,68392:1,69210:1,70252:1,70522:1 12 12 1.000 1.000 4 TCGA:I 14742958 chr17 42624856 43117223 492368 - 0 GT AG 0 0 ,61237:1 1 1 1.000 1.000 4 TCGA:I 14742959 chr17 42624861 43117228 492368 + 0 GT AG 0 0 ,61237:1 1 1 1.000 1.000 4 TCGA:I 14743003 chr17 42628838 43090537 461700 + 0 GC AG 0 0 ,62264:1,69904:1 2 2 1.000 1.000 4 TCGA:I 14743004 chr17 42628839 43090538 461700 - 0 GC AG 0 0 ,69904:1 1 1 1.000 1.000 4 TCGA:I 14743010 chr17 42630388 43113038 482651 + 0 GT AG 0 0 ,68144:1 1 1 1.000 1.000 4 TCGA:I 14743011 chr17 42630397 43113047 482651 - 0 GT AG 0 0 ,68144:1 1 1 1.000 1.000 4 TCGA:I 14743013 chr17 42630401 43109245 478845 - 0 GC AG 0 0 ,69534:1 1 1 1.000 1.000 4 TCGA:I 14743014 chr17 42630401 43113051 482651 - 0 GC AG 0 0 ,68144:1 1 1 1.000 1.000 4 TCGA:I 14743015 chr17 42630407 43109251 478845 - 0 GC AG 0 0 ,69534:1 1 1 1.000 1.000 4 TCGA:I 14743017 chr17 42630530 43125296 494767 - 0 GC AG 0 0 ,65113:1 1 1 1.000 1.000 4 TCGA:I 14743021 chr17 42631013 43078939 447927 - 0 GC AG 0 0 ,63567:1 1 1 1.000 1.000 4 TCGA:I 14743034 chr17 42631447 43122931 491485 - 0 GC AG 0 0 ,66483:1 1 1 1.000 1.000 4 TCGA:I 14743069 chr17 42634418 43102603 468186 - 0 GC AG 0 0 ,67337:1 1 1 1.000 1.000 4 TCGA:I 14743071 chr17 42634424 43102609 468186 - 0 GC AG 0 0 ,67337:1 1 1 1.000 1.000 4 TCGA:I 14743075 chr17 42635243 43063925 428683 + 0 GC AG 0 0 ,63813:1,64954:1 2 2 1.000 1.000 4 TCGA:I 14743087 chr17 42635602 43053591 417990 + 0 GT AG 0 0 ,70361:2 1 2 2.000 2.000 4 TCGA:I 14743091 chr17 42635785 43130359 494575 + 0 GC AG 0 0 ,69012:1 1 1 1.000 1.000 4 TCGA:I 14743130 chr17 42638749 43108608 469860 + 0 GC AG 0 0 ,60861:1,61141:1,62251:1,63036:1,63527:1,68273:1,68406:1,69240:2,70204:1,70772:1 10 11 1.100 1.000 4 TCGA:I 14743139 chr17 42640265 43092098 451834 + 0 AT AC 0 0 ,61711:1,64731:1,68787:1 3 3 1.000 1.000 4 TCGA:I 14743162 chr17 42641426 43102587 461162 - 0 GT AG 0 0 ,70064:1 1 1 1.000 1.000 4 TCGA:I 14743164 chr17 42641438 43102599 461162 - 0 GT AG 0 0 ,70064:1 1 1 1.000 1.000 4 TCGA:I 14743166 chr17 42641461 43133049 491589 + 0 GC AG 0 0 ,68530:1 1 1 1.000 1.000 4 TCGA:I 14743170 chr17 42641730 43060418 418689 - 0 GT AG 0 0 ,64262:1,64895:1,64976:1,68437:1,68588:1 5 5 1.000 1.000 4 TCGA:I 14743173 chr17 42641754 43126429 484676 - 0 GC AG 0 0 ,70543:1 1 1 1.000 1.000 4 TCGA:I 14743191 chr17 42643200 43083275 440076 - 0 GC AG 0 0 ,69671:1 1 1 1.000 1.000 4 TCGA:I 14743192 chr17 42643200 43103025 459826 - 0 GC AG 0 0 ,61216:1 1 1 1.000 1.000 4 TCGA:I 14743202 chr17 42643797 43096591 452795 - 0 GT AG 0 0 ,65501:1 1 1 1.000 1.000 4 TCGA:I 14743213 chr17 42644457 43047853 403397 - 0 GT AG 0 0 ,64599:1 1 1 1.000 1.000 4 TCGA:I 14743214 chr17 42644463 43047859 403397 - 0 GC AG 0 0 ,64599:1 1 1 1.000 1.000 4 TCGA:I 14743224 chr17 42645063 43046275 401213 + 0 GT AG 0 0 ,69189:1 1 1 1.000 1.000 4 TCGA:I 14743244 chr17 42646678 43119164 472487 - 0 GT AG 0 0 ,60958:1 1 1 1.000 1.000 4 TCGA:I 14743245 chr17 42646795 43061098 414304 - 0 GC AG 0 0 ,65537:1 1 1 1.000 1.000 4 TCGA:I 14743266 chr17 42648321 43090971 442651 + 0 GT AG 0 0 ,65877:1 1 1 1.000 1.000 4 TCGA:I 14743280 chr17 42649099 43065636 416538 - 0 GC AG 0 0 ,64860:1,67747:1 2 2 1.000 1.000 4 TCGA:I 14743309 chr17 42652118 43132906 480789 + 0 GC AG 0 0 ,60187:1,60322:1,64375:1,68045:1 4 4 1.000 1.000 4 TCGA:I 14743310 chr17 42652122 43132910 480789 - 0 GC AG 0 0 ,60187:1,60322:1,64375:1,68045:1 4 4 1.000 1.000 4 TCGA:I 14743328 chr17 42654250 43053732 399483 + 0 GC AG 0 0 ,60843:1 1 1 1.000 1.000 4 TCGA:I 14743329 chr17 42654380 43101316 446937 - 0 GC AG 0 0 ,62248:1,62680:1,66570:1,67452:1,68914:1 5 5 1.000 1.000 4 TCGA:I 14743341 chr17 42655081 43058346 403266 - 0 GC AG 0 0 ,62436:1 1 1 1.000 1.000 4 TCGA:I 14743347 chr17 42656469 43065441 408973 + 0 GT AG 0 0 ,65040:1 1 1 1.000 1.000 4 TCGA:I 14743348 chr17 42656478 43065450 408973 - 0 GT AG 0 0 ,65040:1 1 1 1.000 1.000 4 TCGA:I 14743350 chr17 42656483 43065455 408973 + 0 GT AG 0 0 ,65040:1 1 1 1.000 1.000 4 TCGA:I 14743364 chr17 42656845 43151642 494798 + 0 AT AC 0 0 ,61349:1,66212:1,67578:1,68660:1,68800:1,69537:1,70041:1,70564:1 8 8 1.000 1.000 4 TCGA:I 14743366 chr17 42656964 43121569 464606 + 0 GT AG 0 0 ,68449:1 1 1 1.000 1.000 4 TCGA:I 14743381 chr17 42658211 43133964 475754 - 0 GT AG 0 0 ,61420:1,63997:1 2 2 1.000 1.000 4 TCGA:I 14743441 chr17 42659642 43093519 433878 - 0 GT AG 0 0 ,70708:1 1 1 1.000 1.000 4 TCGA:I 14743469 chr17 42660149 43052766 392618 + 0 GC AG 0 0 ,62983:1 1 1 1.000 1.000 4 TCGA:I 14743654 chr17 42661722 43144727 483006 + 0 GT AG 0 aC19,gC19,gC38,kG19,rG19,rG38,sG19,sG38,vG19 ,59904:1,64546:1,69966:1 3 3 1.000 1.000 4 TCGA:I 14743655 chr17 42661722 43153601 491880 + 0 GT AG 0 aC19,gC19,gC38,kG19,sG19,sG38,vG19 ,67805:1 1 1 1.000 1.000 4 TCGA:I 14743722 chr17 42662369 43119229 456861 + 0 GC AG 0 0 ,64147:1 1 1 1.000 1.000 4 TCGA:I 14743854 chr17 42663571 43136055 472485 + 0 GC AG 0 0 ,69400:1 1 1 1.000 1.000 4 TCGA:I 14743869 chr17 42663802 43108563 444762 + 0 GC AG 0 0 ,60113:1,60947:1,63432:1,64735:1,70849:1 5 5 1.000 1.000 4 TCGA:I 14743898 chr17 42664956 43072947 407992 - 0 GC AG 0 0 ,66093:1,69208:1 2 2 1.000 1.000 4 TCGA:I 14743899 chr17 42664961 43143176 478216 + 0 GT AG 0 0 ,65831:1 1 1 1.000 1.000 4 TCGA:I 14743905 chr17 42665130 43044885 379756 - 0 GT AG 0 0 ,62509:1 1 1 1.000 1.000 4 TCGA:I 14744039 chr17 42665789 43124976 459188 - 0 GT AG 0 0 ,63975:2 1 2 2.000 2.000 4 TCGA:I 14744051 chr17 42665824 43126105 460282 + 0 GT AG 0 0 ,69529:1 1 1 1.000 1.000 4 TCGA:I 14744240 chr17 42667828 43167573 499746 + 0 GC AG 0 0 ,66468:1 1 1 1.000 1.000 4 TCGA:I 14744278 chr17 42668089 43074381 406293 + 0 GC AG 0 0 ,61286:1 1 1 1.000 1.000 4 TCGA:I 14744644 chr17 42668345 43093328 424984 + 0 GT AG 0 0 ,60334:1 1 1 1.000 1.000 4 TCGA:I 14744651 chr17 42668376 43047323 378948 - 0 GT AG 0 0 ,71058:1 1 1 1.000 1.000 4 TCGA:I 14744699 chr17 42668897 43083945 415049 - 0 GT AG 0 0 ,64360:2 1 2 2.000 2.000 4 TCGA:I 14744706 chr17 42668903 43083951 415049 - 0 GC AG aC19 0 ,64360:2 1 2 2.000 2.000 4 TCGA:I 14744707 chr17 42668903 43118851 449949 - 0 GC AG aC19 0 ,63644:1 1 1 1.000 1.000 4 TCGA:I 14745055 chr17 42669966 43144590 474625 - 0 GC AG 0 0 ,68047:1 1 1 1.000 1.000 4 TCGA:I 14745537 chr17 42670975 43051024 380050 + 0 GC AG 0 0 ,65582:1 1 1 1.000 1.000 4 TCGA:I 14745868 chr17 42672302 43079424 407123 + 0 AT AC 0 0 ,68470:1 1 1 1.000 1.000 4 TCGA:I 14746041 chr17 42673513 43140108 466596 + 0 GC AG 0 0 ,60049:1,61894:1,62829:2,62989:1,67878:1,68665:1,70580:1 7 8 1.143 1.000 4 TCGA:I 14746134 chr17 42673959 43171269 497311 - 0 GC AG 0 0 ,70461:1 1 1 1.000 1.000 4 TCGA:I 14746148 chr17 42673986 43111986 438001 + 0 GC AG 0 0 ,68468:1 1 1 1.000 1.000 4 TCGA:I 14746219 chr17 42674469 43079554 405086 - 0 GC AG 0 0 ,59761:1 1 1 1.000 1.000 4 TCGA:I 14746308 chr17 42675037 43119235 444199 + 0 GC AG 0 0 ,62938:1 1 1 1.000 1.000 4 TCGA:I 14746354 chr17 42675545 43149876 474332 - 0 GC AG 0 0 ,68437:1 1 1 1.000 1.000 4 TCGA:I 14746420 chr17 42676431 43086898 410468 + 0 GC AG 0 0 ,70449:1 1 1 1.000 1.000 4 TCGA:I 14746429 chr17 42676442 43069377 392936 + 0 GT AG 0 0 ,60883:1,63155:1,65577:1,67095:1,68260:1,69090:1,69249:1 7 7 1.000 1.000 4 TCGA:I 14746555 chr17 42676945 43159301 482357 - 0 AT AC 0 0 ,60698:1 1 1 1.000 1.000 4 TCGA:I 14746600 chr17 42678131 43159603 481473 - 0 GC AG 0 0 ,64972:1 1 1 1.000 1.000 4 TCGA:I 14746610 chr17 42678383 43170323 491941 + 0 GC AG 0 0 ,65337:1 1 1 1.000 1.000 4 TCGA:I 14746666 chr17 42679710 43102356 422647 + 0 GC AG 0 0 ,62718:1 1 1 1.000 1.000 4 TCGA:I 14746845 chr17 42681542 43078315 396774 - 0 GT AG 0 0 ,64361:1 1 1 1.000 1.000 4 TCGA:I 14746846 chr17 42681547 43078320 396774 + 0 GT AG 0 0 ,64361:1 1 1 1.000 1.000 4 TCGA:I 14746891 chr17 42682575 43145126 462552 + 0 GT AG 0 0 ,67586:1 1 1 1.000 1.000 4 TCGA:I 14747015 chr17 42684650 43120799 436150 + 0 GC AG 0 0 ,63673:1 1 1 1.000 1.000 4 TCGA:I 14747022 chr17 42684855 43087591 402737 + 0 GC AG 0 0 ,66828:1 1 1 1.000 1.000 4 TCGA:I 14747294 chr17 42688974 43150926 461953 - 0 GT AG 0 0 ,62021:1 1 1 1.000 1.000 4 TCGA:I 14747312 chr17 42689459 43134934 445476 + 0 AT AC 0 0 ,61376:1,63208:1,65529:1,68294:1 4 4 1.000 1.000 4 TCGA:I 14747325 chr17 42689644 43118084 428441 + 0 AT AC 0 0 ,60531:1,70773:1 2 2 1.000 1.000 4 TCGA:I 14747328 chr17 42689732 43140247 450516 - 0 GT AG 0 0 ,69852:1 1 1 1.000 1.000 4 TCGA:I 14747360 chr17 42690208 43048171 357964 + 0 GT AG aC19,cG19,cG38,gC19,gC38,kG19,kG38,mG19,mG38,rG19,rG38,sG19,sG38 0 ,65154:1 1 1 1.000 1.000 4 TCGA:I 14747492 chr17 42692110 43145121 453012 + 0 GT AG 0 0 ,69375:1 1 1 1.000 1.000 4 TCGA:I 14747591 chr17 42694254 43044885 350632 - 0 GT AG 0 0 ,60502:1,61152:1,61521:1,61750:1,62161:1,62403:1,63326:1,63842:1,63894:1,63922:1,64024:1,64331:1,64448:1,64486:1,64727:1,64954:1,65331:1,65592:1,66061:1,66724:1,67237:1,67287:1,68880:1,69678:1,69837:1,69944:1,69993:1,70183:1,70427:1,71074:1 30 30 1.000 1.000 4 TCGA:I 14747592 chr17 42694260 43044891 350632 - 0 GT AG 0 0 ,60502:1,61152:1,61521:1,61750:1,62161:1,62403:1,63326:1,63842:1,63894:1,63922:1,64024:1,64331:1,64448:1,64486:1,64727:1,64954:1,65331:1,65592:1,66061:1,66724:1,67237:1,67287:1,68880:1,69678:1,69837:1,69944:1,69993:1,70183:1,70427:1,71074:1 30 30 1.000 1.000 4 TCGA:I 14747594 chr17 42694267 43044848 350582 + 0 GC AG 0 0 ,62471:2,63895:1,64115:1,67507:1,69030:1,69698:1 6 7 1.167 1.000 4 TCGA:I 14747597 chr17 42694286 43044917 350632 - 0 GC AG 0 0 ,59839:1,61444:1,65529:1,65914:1,67322:1,67697:1,67698:1,67791:2,68040:1,69405:1 10 11 1.100 1.000 4 TCGA:I 14747619 chr17 42695149 43054475 359327 - 0 AT AC 0 0 ,65529:1 1 1 1.000 1.000 4 TCGA:I 14747633 chr17 42695565 43096661 401097 - 0 GT AG 0 0 ,68106:1 1 1 1.000 1.000 4 TCGA:I 14747723 chr17 42696525 43099472 402948 - 0 AT AC 0 0 ,67943:1 1 1 1.000 1.000 4 TCGA:I 14747725 chr17 42696572 43103019 406448 - 0 GT AG 0 0 ,64123:1 1 1 1.000 1.000 4 TCGA:I 14747726 chr17 42696578 43103025 406448 - 0 GC AG 0 0 ,64123:1 1 1 1.000 1.000 4 TCGA:I 14747947 chr17 42698817 43102016 403200 - 0 GC AG 0 0 ,67276:1 1 1 1.000 1.000 4 TCGA:I 14747981 chr17 42699104 43082222 383119 - 0 GC AG 0 0 ,60078:1,60630:1,67199:2 3 4 1.333 1.000 4 TCGA:I 14748105 chr17 42700569 43051024 350456 + 0 GC AG 0 0 ,64104:1 1 1 1.000 1.000 4 TCGA:I 14748111 chr17 42700592 43184005 483414 - 0 GT AG 0 0 ,59987:1,60714:1,60759:1,61044:1,61253:1,61463:1,61741:1,61826:1,61894:1,62036:1,62375:1,63125:1,63199:1,63476:1,64218:1,64461:1,64546:1,65748:1,66099:1,66423:1,66620:1,66739:1,66919:1,67569:1,67666:1,69473:1,69827:1,69866:1,70013:1,70828:1,70925:1 31 31 1.000 1.000 4 TCGA:I 14748171 chr17 42700768 43134540 433773 - 0 GC AG 0 0 ,64084:1 1 1 1.000 1.000 4 TCGA:I 14748597 chr17 42701920 43193463 491544 - 0 GC AG 0 0 ,62867:1,65445:1 2 2 1.000 1.000 4 TCGA:I 14748615 chr17 42701981 43067888 365908 + 0 GT AG 0 0 ,63563:1 1 1 1.000 1.000 4 TCGA:I 14748725 chr17 42702311 43057051 354741 - 0 GT AG 0 aC19,cG19,cG38,gC19,gC38,kG19,kG38,mG19,mG38,rG19,rG38,sG19,sG38,vG19 ,69986:1 1 1 1.000 1.000 4 TCGA:I 14748781 chr17 42702621 43175811 473191 + 0 GT AG 0 0 ,63584:1 1 1 1.000 1.000 4 TCGA:I 14748845 chr17 42703509 43178249 474741 - 0 AT AC 0 0 ,60165:1,63139:1,64356:1,65306:1,66763:1,68487:1 6 6 1.000 1.000 4 TCGA:I 14748847 chr17 42703518 43178258 474741 + 0 GC AG 0 0 ,60165:1,63139:1,64356:1,65306:1,66763:1,68487:1 6 6 1.000 1.000 4 TCGA:I 14748855 chr17 42703601 43144378 440778 - 0 GC AG 0 0 ,66215:1 1 1 1.000 1.000 4 TCGA:I 14748864 chr17 42703740 43193175 489436 - 0 GT AG 0 0 ,60964:1,63211:1 2 2 1.000 1.000 4 TCGA:I 14748883 chr17 42703991 43094627 390637 - 0 GC AG 0 0 ,61669:1,62385:1,62460:1,63343:1,66500:1 5 5 1.000 1.000 4 TCGA:I 14748886 chr17 42704115 43159997 455883 + 0 GT AG 0 0 ,59923:1 1 1 1.000 1.000 4 TCGA:I 14748892 chr17 42704485 43111758 407274 - 0 GC AG 0 0 ,60020:1 1 1 1.000 1.000 4 TCGA:I 14748929 chr17 42705203 43044765 339563 - 0 AT AC 0 0 ,65298:2 1 2 2.000 2.000 4 TCGA:I 14748984 chr17 42706491 43136098 429608 + 0 GC AG 0 0 ,64517:1 1 1 1.000 1.000 4 TCGA:I 14748993 chr17 42707264 43162924 455661 + 0 AT AC 0 0 ,59999:1 1 1 1.000 1.000 4 TCGA:I 14749040 chr17 42708388 43078028 369641 - 0 GC AG 0 0 ,68368:1 1 1 1.000 1.000 4 TCGA:I 14749042 chr17 42708645 43205343 496699 + 0 GC AG 0 0 ,65136:1,68371:1 2 2 1.000 1.000 4 TCGA:I 14749090 chr17 42709938 43063332 353395 - 0 GT AG aC19,cG19,cG38,gC19,gC38,kG19,kG38,mG19,mG38,rG19,rG38,sG19,sG38 aC19,cG19,cG38,gC19,gC38,kG19,kG38,mG19,mG38,rG19,rG38,sG19,sG38,vG19 ,65661:1 1 1 1.000 1.000 4 TCGA:I 14749126 chr17 42710778 43166023 455246 + 0 GT AG 0 0 ,64064:1 1 1 1.000 1.000 4 TCGA:I 14749147 chr17 42711403 43065593 354191 + 0 GC AG 0 0 ,60388:1 1 1 1.000 1.000 4 TCGA:I 14749160 chr17 42711747 43141406 429660 + 0 GT AG 0 0 ,61835:1 1 1 1.000 1.000 4 TCGA:I 14749173 chr17 42712158 43202663 490506 + 0 GC AG 0 0 ,60497:1,61486:1,61763:1,61764:1,62810:1,63169:1,63179:1,63213:1,63379:1,64446:1,64496:1,66973:1,67353:1,69200:1,69452:1,71024:1,71075:1 17 17 1.000 1.000 4 TCGA:I 14749183 chr17 42712347 43125723 413377 + 0 GT AG 0 0 ,70850:1 1 1 1.000 1.000 4 TCGA:I 14749229 chr17 42712801 43204578 491778 + 0 GC AG 0 0 ,68106:1 1 1 1.000 1.000 4 TCGA:I 14749231 chr17 42712807 43204584 491778 + 0 GC AG 0 0 ,68106:1 1 1 1.000 1.000 4 TCGA:I 14749232 chr17 42712811 43204588 491778 + 0 GC AG 0 0 ,68106:1 1 1 1.000 1.000 4 TCGA:I 14749234 chr17 42712820 43065450 352631 - 0 GT AG 0 0 ,63958:2 1 2 2.000 2.000 4 TCGA:I 14749236 chr17 42712825 43065455 352631 + 0 GT AG 0 0 ,63958:2 1 2 2.000 2.000 4 TCGA:I 14749272 chr17 42713872 43044741 330870 + 0 AT AC 0 0 ,68071:1,70503:1 2 2 1.000 1.000 4 TCGA:I 14749277 chr17 42714440 43107207 392768 + 0 GT AG 0 0 ,62233:1 1 1 1.000 1.000 4 TCGA:I 14749281 chr17 42715449 43056380 340932 - 0 AT AC 0 0 ,61598:1,61616:1,65553:2 3 4 1.333 1.000 4 TCGA:I 14749292 chr17 42716520 43210785 494266 + 0 AT AC 0 0 ,61933:1,68527:1 2 2 1.000 1.000 4 TCGA:I 14749299 chr17 42717283 43199001 481719 + 0 AT AC 0 0 ,67996:1 1 1 1.000 1.000 4 TCGA:I 14749302 chr17 42717285 43199003 481719 - 0 AT AC 0 0 ,67996:1 1 1 1.000 1.000 4 TCGA:I 14749304 chr17 42717475 43051062 333588 - 0 GT AG 0 aC19,cG19,cG38,gC19,gC38,kG19,kG38,mG19,mG38,rG19,rG38,sG19,sG38,vG19 ,65411:1 1 1 1.000 1.000 4 TCGA:I 14749310 chr17 42718002 43094710 376709 + 0 AT AC 0 0 ,66300:1,66317:1,69508:1 3 3 1.000 1.000 4 TCGA:I 14749324 chr17 42718428 43082946 364519 + 0 AT AC 0 0 ,68625:1 1 1 1.000 1.000 4 TCGA:I 14749375 chr17 42719635 43089214 369580 + 0 GC AG 0 0 ,64525:1 1 1 1.000 1.000 4 TCGA:I 14749424 chr17 42720705 43142788 422084 + 0 GC AG 0 0 ,60833:1 1 1 1.000 1.000 4 TCGA:I 14749451 chr17 42722215 43108465 386251 + 0 GC AG 0 0 ,64402:1 1 1 1.000 1.000 4 TCGA:I 14749456 chr17 42722345 43165863 443519 - 0 GT AG 0 0 ,67671:1 1 1 1.000 1.000 4 TCGA:I 14749494 chr17 42723980 43189075 465096 - 0 GC AG 0 0 ,68463:1 1 1 1.000 1.000 4 TCGA:I 14749540 chr17 42724893 43202038 477146 + 0 GC AG 0 0 ,60129:1 1 1 1.000 1.000 4 TCGA:I 14749560 chr17 42725389 43182109 456721 - 0 GC AG 0 0 ,60789:1,63457:2,68744:1,70548:1 4 5 1.250 1.000 4 TCGA:I 14749566 chr17 42725559 43150377 424819 + 0 GT AG 0 0 ,59919:1 1 1 1.000 1.000 4 TCGA:I 14749570 chr17 42725945 43218633 492689 - 0 GC AG 0 0 ,61234:1,70470:1 2 2 1.000 1.000 4 TCGA:I 14749571 chr17 42725950 43218633 492684 - 0 GC AG 0 0 ,64819:1,70737:1 2 2 1.000 1.000 4 TCGA:I 14749572 chr17 42725953 43220165 494213 + 0 AT AC 0 0 ,60821:2 1 2 2.000 2.000 4 TCGA:I 14749574 chr17 42725961 43220173 494213 - 0 GT AG 0 0 ,60821:2 1 2 2.000 2.000 4 TCGA:I 14749576 chr17 42725967 43218633 492667 - 0 GC AG 0 0 ,60571:1 1 1 1.000 1.000 4 TCGA:I 14749603 chr17 42726594 43222247 495654 - 0 GT AG 0 0 ,61817:1 1 1 1.000 1.000 4 TCGA:I 14749607 chr17 42726600 43222253 495654 - 0 GT AG 0 0 ,61817:1 1 1 1.000 1.000 4 TCGA:I 14749625 chr17 42726895 43222210 495316 + 0 GC AG 0 0 ,67161:1 1 1 1.000 1.000 4 TCGA:I 14749639 chr17 42727367 43130262 402896 - 0 GT AG 0 0 ,64293:1 1 1 1.000 1.000 4 TCGA:I 14749640 chr17 42727367 43225147 497781 - 0 GT AG 0 0 ,66517:1 1 1 1.000 1.000 4 TCGA:I 14749642 chr17 42727373 43130268 402896 - 0 GC AG 0 0 ,64293:1 1 1 1.000 1.000 4 TCGA:I 14749643 chr17 42727373 43225153 497781 - 0 GC AG 0 0 ,66517:1 1 1 1.000 1.000 4 TCGA:I 14749662 chr17 42727764 43145895 418132 - 0 GC AG aC19,cG19,cG38,gC19,gC38,kG19,kG38,mG19,mG38,rG19,rG38,sG19,sG38 0 ,63826:1 1 1 1.000 1.000 4 TCGA:I 14749671 chr17 42727960 43183041 455082 + 0 GC AG 0 0 ,62044:1 1 1 1.000 1.000 4 TCGA:I 14749697 chr17 42728873 43140707 411835 - 0 AT AC 0 0 ,60526:1 1 1 1.000 1.000 4 TCGA:I 14749724 chr17 42729176 43219502 490327 + 0 GT AG 0 0 ,66509:1 1 1 1.000 1.000 4 TCGA:I 14749757 chr17 42729780 43159125 429346 - 0 GT AG 0 kG19 ,67377:1 1 1 1.000 1.000 4 TCGA:I 14749764 chr17 42729968 43117371 387404 + 0 GT AG 0 0 ,64023:1 1 1 1.000 1.000 4 TCGA:I 14749772 chr17 42730824 43131249 400426 - 0 GT AG 0 0 ,62000:1 1 1 1.000 1.000 4 TCGA:I 14749810 chr17 42731339 43152564 421226 - 0 GT AG 0 0 ,62512:1 1 1 1.000 1.000 4 TCGA:I 14749813 chr17 42731397 43150377 418981 + 0 GT AG 0 0 ,70586:1 1 1 1.000 1.000 4 TCGA:I 14749821 chr17 42731648 43095321 363674 - 0 GC AG 0 0 ,61865:1 1 1 1.000 1.000 4 TCGA:I 14749838 chr17 42731873 43065639 333767 - 0 GC AG 0 0 ,67195:1 1 1 1.000 1.000 4 TCGA:I 14749842 chr17 42732023 43219502 487480 + 0 GT AG 0 0 ,60148:1,60500:1,61133:1,61624:1,61836:1,62276:1,63118:1,63139:1,63570:1,66738:1,67305:2,67988:1,68621:1 13 14 1.077 1.000 4 TCGA:I 14749843 chr17 42732084 43058338 326255 + 0 AT AC 0 0 ,64352:1 1 1 1.000 1.000 4 TCGA:I 14749844 chr17 42732115 43065666 333552 - 0 GT AG 0 0 ,63677:2,66181:1,67041:1 3 4 1.333 1.000 4 TCGA:I 14749851 chr17 42732415 43090977 358563 - 0 GC AG 0 0 ,68106:1 1 1 1.000 1.000 4 TCGA:I 14749863 chr17 42732538 43055553 323016 + 0 GC AG 0 0 ,60414:1,64914:1 2 2 1.000 1.000 4 TCGA:I 14749869 chr17 42732808 43141327 408520 + 0 GC AG 0 0 ,61789:1 1 1 1.000 1.000 4 TCGA:I 14749870 chr17 42732820 43055803 322984 + 0 AT AC 0 0 ,65841:1 1 1 1.000 1.000 4 TCGA:I 14749872 chr17 42732824 43055807 322984 - 0 GC AG 0 0 ,65841:1 1 1 1.000 1.000 4 TCGA:I 14749873 chr17 42732824 43141343 408520 - 0 GC AG 0 0 ,61789:1 1 1 1.000 1.000 4 TCGA:I 14749886 chr17 42733120 43218442 485323 - 0 GT AG 0 0 ,61009:1,66377:2 2 3 1.500 1.500 4 TCGA:I 14749889 chr17 42733145 43191058 457914 - 0 GC AG 0 0 ,60210:1,61475:1,62750:1,62786:1,64221:1,65600:1,65963:1,65971:1,66565:1,66942:1,67344:1,68664:1,68851:2,69083:1,69618:2 15 17 1.133 1.000 4 TCGA:I 14749896 chr17 42733362 43154209 420848 + 0 GC AG 0 0 ,66866:1 1 1 1.000 1.000 4 TCGA:I 14749902 chr17 42733497 43197374 463878 - 0 GC AG 0 0 ,66317:1 1 1 1.000 1.000 4 TCGA:I 14749904 chr17 42733516 43117316 383801 - 0 GC AG 0 0 ,67881:1 1 1 1.000 1.000 4 TCGA:I 14749910 chr17 42733539 43071905 338367 + 0 GC AG 0 0 ,61216:1,64137:1,64626:1,68427:1 4 4 1.000 1.000 4 TCGA:I 14749911 chr17 42733539 43196019 462481 + 0 GC AG 0 0 ,59786:1,60710:1,61349:1,61625:1,62671:1,62737:1,66213:1,67679:1,68048:2,69745:2 10 12 1.200 1.000 4 TCGA:I 14749923 chr17 42733756 43206878 473123 + 0 AT AC 0 0 ,59908:1,60053:1,60164:1,60188:1,60375:1,60452:1,60460:1,60492:1,60572:1,60615:1,60718:1,60781:1,60975:1,60980:1,61111:1,61117:1,61144:1,61200:1,61241:1,61313:1,61374:1,61405:1,61487:1,61643:1,61713:1,61748:1,62031:2,62336:1,62375:1,62522:1,62552:1,62783:1,62833:1,63000:1,63070:1,63310:1,63325:1,63381:1,63422:1,63612:1,63806:1,63837:1,63968:1,63994:2,64292:1,64540:1,64821:1,64852:1,65055:1,65193:1,65261:1,65461:1,65651:3,65923:1,65959:2,66092:1,66094:1,66212:1,66451:1,66512:1,66553:1,66655:1,66671:2,66682:1,66862:2,66894:1,67091:1,67229:1,67282:1,67324:1,67338:1,67341:1,67614:1,67662:1,67686:1,67718:1,67895:1,68045:2,68100:1,68104:1,68117:1,68149:2,68302:1,68518:1,68557:1,68636:1,68653:1,68773:1,68841:2,68979:1,69023:1,69032:1,69214:2,69382:1,69383:1,69678:2,69875:1,69980:1,69989:1,70026:1,70048:1,70050:1,70092:1,70119:1,70181:1,70193:1,70251:1,70330:1,70378:1,70434:1,70435:1,70555:1,70760:1,70781:1,70876:1 115 127 1.104 1.000 4 TCGA:I 14749924 chr17 42733766 43206888 473123 - 0 GT AG 0 0 ,59908:1,60053:1,60125:1,60164:1,60188:1,60375:1,60452:1,60460:1,60492:1,60572:1,60615:1,60718:1,60781:1,60975:1,60980:1,61111:1,61117:1,61144:1,61200:1,61241:1,61313:1,61374:1,61405:1,61487:1,61643:1,61713:1,61748:1,62031:2,62336:1,62375:1,62522:1,62552:1,62783:1,62833:1,63000:1,63070:1,63205:1,63310:1,63325:1,63381:1,63422:1,63612:1,63806:1,63837:1,63968:1,63994:2,64292:1,64540:1,64821:1,64852:1,65055:1,65193:1,65261:1,65461:1,65651:3,65877:1,65923:1,65959:2,66092:1,66094:1,66212:1,66451:1,66512:1,66553:1,66655:1,66671:2,66682:1,66862:2,66894:1,67091:1,67229:1,67282:1,67324:1,67338:1,67341:1,67614:1,67662:1,67686:1,67718:1,67895:1,68045:2,68100:1,68104:1,68117:1,68149:2,68302:1,68518:1,68557:1,68636:1,68653:1,68773:1,68841:2,68979:1,69023:1,69032:1,69214:2,69382:1,69383:1,69678:2,69875:1,69980:1,69989:1,70026:1,70048:1,70050:1,70092:1,70119:1,70181:1,70193:1,70251:1,70330:1,70378:1,70434:1,70435:1,70555:1,70760:1,70781:1,70876:1 118 130 1.102 1.000 4 TCGA:I 14749939 chr17 42733914 43185061 451148 - 0 GC AG 0 0 ,62060:1,62110:1,62938:2,63249:1,63997:1,65643:1,65670:1,66067:1,67338:1,67392:1,67916:1,67923:1,68102:1,70743:1 14 15 1.071 1.000 4 TCGA:I 14749984 chr17 42735417 43211098 475682 + 0 GC AG 0 0 ,70170:1 1 1 1.000 1.000 4 TCGA:I 14749998 chr17 42736411 43226741 490331 + 0 AT AC 0 0 ,69026:1 1 1 1.000 1.000 4 TCGA:I 14750015 chr17 42736731 43141368 404638 + 0 GC AG 0 0 ,60914:1 1 1 1.000 1.000 4 TCGA:I 14750020 chr17 42736737 43141374 404638 + 0 GC AG 0 0 ,60914:1 1 1 1.000 1.000 4 TCGA:I 14750021 chr17 42736737 43154089 417353 + 0 GC AG 0 0 ,61877:1,63490:2 2 3 1.500 1.500 4 TCGA:I 14750024 chr17 42736781 43211022 474242 + 0 GT AG 0 0 ,61186:1 1 1 1.000 1.000 4 TCGA:I 14750034 chr17 42737374 43141378 404005 + 0 GT AG 0 0 ,60914:1 1 1 1.000 1.000 4 TCGA:I 14750035 chr17 42737374 43154093 416720 + 0 GT AG 0 0 ,61877:1,63490:2 2 3 1.500 1.500 4 TCGA:I 14750039 chr17 42737408 43191058 453651 - 0 GC AG 0 0 ,63960:1,70055:1 2 2 1.000 1.000 4 TCGA:I 14750054 chr17 42737917 43168377 430461 - 0 GC AG 0 0 ,59932:1,60644:1,61163:1,61213:1,61222:2,61385:1,62268:1,62294:1,62796:1,62862:1,63096:1,63151:1,63405:1,64423:1,64690:1,66097:1,67065:1,68060:1,68138:1,68482:1,68850:1,68935:1,69573:1,70116:1,70145:1,70483:1,70604:1,70832:1,71083:1 29 30 1.034 1.000 4 TCGA:I 14750063 chr17 42738149 43112582 374434 - 0 GC AG 0 0 ,59832:1 1 1 1.000 1.000 4 TCGA:I 14750064 chr17 42738149 43215215 477067 - 0 GC AG 0 0 ,60202:1,61132:3,61419:1,61711:1,63245:1,63276:1,64733:1,65375:1,65716:1,66359:1,70817:1 11 13 1.182 1.000 4 TCGA:I 14750086 chr17 42738945 43169355 430411 + 0 GC AG 0 0 ,70548:1 1 1 1.000 1.000 4 TCGA:I 14750096 chr17 42739539 43230488 490950 - 0 GC AG 0 0 ,68805:1 1 1 1.000 1.000 4 TCGA:I 14750104 chr17 42739829 43141956 402128 + 0 GC AG 0 0 ,63841:1 1 1 1.000 1.000 4 TCGA:I 14750105 chr17 42739829 43144783 404955 + 0 GC AG 0 0 ,69818:1 1 1 1.000 1.000 4 TCGA:I 14750132 chr17 42740599 43103019 362421 - 0 GT AG 0 0 ,66129:1,66871:1,70911:1 3 3 1.000 1.000 4 TCGA:I 14750133 chr17 42740605 43103025 362421 - 0 GC AG 0 0 ,66129:1,66871:1,70911:1 3 3 1.000 1.000 4 TCGA:I 14750138 chr17 42741340 43060025 318686 - 0 GC AG 0 0 ,60661:1 1 1 1.000 1.000 4 TCGA:I 14750141 chr17 42741420 43072927 331508 + 0 GC AG 0 0 ,67242:2 1 2 2.000 2.000 4 TCGA:I 14750186 chr17 42743426 43077588 334163 - 0 GC AG 0 0 ,65911:1 1 1 1.000 1.000 4 TCGA:I 14750191 chr17 42743590 43132697 389108 - 0 GC AG 0 0 ,68358:1 1 1 1.000 1.000 4 TCGA:I 14750209 chr17 42744866 43167055 422190 - 0 GC AG 0 0 ,62016:1 1 1 1.000 1.000 4 TCGA:I 14750221 chr17 42745690 43044848 299159 + 0 GC AG 0 0 ,60319:1,60532:1,60964:1,61056:1,62613:1,62732:1,63387:1,63739:2,64115:1,66140:1,66181:1,67087:1,67611:1,68578:1,69448:1,70517:1 16 17 1.062 1.000 4 TCGA:I 14750232 chr17 42745759 43048316 302558 - 0 GC AG 0 0 ,61038:1 1 1 1.000 1.000 4 TCGA:I 14750233 chr17 42745759 43062711 316953 - 0 GC AG 0 0 ,66517:3 1 3 3.000 3.000 4 TCGA:I 14750234 chr17 42745759 43065078 319320 - 0 GC AG 0 0 ,66430:1 1 1 1.000 1.000 4 TCGA:I 14750235 chr17 42745759 43066931 321173 - 0 GC AG 0 0 ,67043:1 1 1 1.000 1.000 4 TCGA:I 14750236 chr17 42745759 43149902 404144 - 0 GC AG 0 0 ,61452:1 1 1 1.000 1.000 4 TCGA:I 14750242 chr17 42745765 43062717 316953 - 0 GC AG 0 0 ,66517:3 1 3 3.000 3.000 4 TCGA:I 14750243 chr17 42745765 43066937 321173 - 0 GC AG 0 0 ,67043:1 1 1 1.000 1.000 4 TCGA:I 14750248 chr17 42745972 43130105 384134 - 0 GC AG 0 0 ,69697:1 1 1 1.000 1.000 4 TCGA:I 14750252 chr17 42746419 43231747 485329 + 0 GT AG 0 0 ,63463:1 1 1 1.000 1.000 4 TCGA:I 14750254 chr17 42746432 43102603 356172 - 0 GC AG 0 0 ,67831:1,68414:1 2 2 1.000 1.000 4 TCGA:I 14750260 chr17 42747382 43048316 300935 - 0 GC AG 0 0 ,67742:1 1 1 1.000 1.000 4 TCGA:I 14750265 chr17 42748320 43198011 449692 + 0 GC AG 0 0 ,64299:1 1 1 1.000 1.000 4 TCGA:I 14750266 chr17 42748787 43186328 437542 + 0 GC AG 0 0 ,61441:1,63719:1,63919:1,65359:1,70461:1 5 5 1.000 1.000 4 TCGA:I 14750267 chr17 42749022 43071040 322019 - 0 AT AC 0 0 ,65386:1 1 1 1.000 1.000 4 TCGA:I 14750271 chr17 42750395 43191550 441156 - 0 GT AG 0 0 ,59958:1,60266:1 2 2 1.000 1.000 4 TCGA:I 14750274 chr17 42750514 43100813 350300 - 0 GT AG 0 0 ,64170:1 1 1 1.000 1.000 4 TCGA:I 14750275 chr17 42750552 43207477 456926 - 0 GC AG 0 0 ,70697:1 1 1 1.000 1.000 4 TCGA:I 14750276 chr17 42751433 43215209 463777 + 0 AT AC 0 0 ,68368:1 1 1 1.000 1.000 4 TCGA:I 14750284 chr17 42751926 43051681 299756 + 0 GC AG 0 0 ,61329:1 1 1 1.000 1.000 4 TCGA:I 14750285 chr17 42751932 43215433 463502 - 0 AT AC 0 0 ,60472:1,67800:1,69285:1 3 3 1.000 1.000 4 TCGA:I 14750291 chr17 42751992 43183334 431343 - 0 GC AG 0 0 ,66658:1 1 1 1.000 1.000 4 TCGA:I 14750292 chr17 42751998 43183340 431343 - 0 GC AG 0 0 ,66658:1 1 1 1.000 1.000 4 TCGA:I 14750296 chr17 42752037 43237311 485275 - 0 GC AG 0 0 ,67562:1 1 1 1.000 1.000 4 TCGA:I 14750298 chr17 42752124 43133879 381756 - 0 GC AG 0 0 ,67279:1 1 1 1.000 1.000 4 TCGA:I 14750304 chr17 42752449 43231824 479376 - 0 AT AC 0 0 ,70193:1 1 1 1.000 1.000 4 TCGA:I 14750315 chr17 42752925 43076287 323363 + 0 AT AC 0 0 ,62795:1 1 1 1.000 1.000 4 TCGA:I 14750328 chr17 42753246 43193428 440183 - 0 AT AC 0 0 ,60977:1 1 1 1.000 1.000 4 TCGA:I 14750329 chr17 42753268 43211977 458710 - 0 GT AG 0 0 ,65241:1 1 1 1.000 1.000 4 TCGA:I 14750337 chr17 42753563 43218764 465202 - 0 GC AG 0 0 ,64542:1 1 1 1.000 1.000 4 TCGA:I 14750339 chr17 42753605 43138688 385084 - 0 GC AG 0 0 ,69403:1 1 1 1.000 1.000 4 TCGA:I 14750341 chr17 42753622 43126549 372928 - 0 GT AG 0 0 ,66501:1 1 1 1.000 1.000 4 TCGA:I 14750354 chr17 42753752 43139921 386170 - 0 GT AG 0 0 ,60528:1,70211:1 2 2 1.000 1.000 4 TCGA:I 14750360 chr17 42753832 43198866 445035 + 0 GC AG 0 0 ,68534:1 1 1 1.000 1.000 4 TCGA:I 14750362 chr17 42753856 43130377 376522 - 0 AT AC 0 0 ,68109:1 1 1 1.000 1.000 4 TCGA:I 14750381 chr17 42753944 43044848 290905 + 0 GC AG 0 0 ,63259:1 1 1 1.000 1.000 4 TCGA:I 14750382 chr17 42753944 43102115 348172 + 0 GC AG 0 0 ,61700:1 1 1 1.000 1.000 4 TCGA:I 14750383 chr17 42753944 43227287 473344 + 0 GC AG 0 0 ,68775:1,69093:1 2 2 1.000 1.000 4 TCGA:I 14750402 chr17 42754152 43248875 494724 + 0 GC AG 0 0 ,64610:1 1 1 1.000 1.000 4 TCGA:I 14750403 chr17 42754156 43248879 494724 - 0 AT AC 0 0 ,64610:1 1 1 1.000 1.000 4 TCGA:I 14750407 chr17 42754210 43054475 300266 - 0 AT AC 0 0 ,70736:1 1 1 1.000 1.000 4 TCGA:I 14750408 chr17 42754210 43073958 319749 - 0 AT AC 0 0 ,60316:1,63096:1,64690:1,65203:1 4 4 1.000 1.000 4 TCGA:I 14750409 chr17 42754210 43101703 347494 - 0 AT AC 0 0 ,61493:1,64265:1 2 2 1.000 1.000 4 TCGA:I 14750410 chr17 42754210 43102558 348349 - 0 AT AC 0 0 ,61493:1,64265:1 2 2 1.000 1.000 4 TCGA:I 14750413 chr17 42754219 43045014 290796 + 0 GC AG 0 0 ,65116:1 1 1 1.000 1.000 4 TCGA:I 14750414 chr17 42754219 43054484 300266 + 0 GC AG 0 0 ,70736:1 1 1 1.000 1.000 4 TCGA:I 14750415 chr17 42754219 43073967 319749 + 0 GC AG 0 0 ,60316:1,63096:1,64690:1,65203:1 4 4 1.000 1.000 4 TCGA:I 14750416 chr17 42754219 43102567 348349 + 0 GC AG 0 0 ,61493:1,64265:1 2 2 1.000 1.000 4 TCGA:I 14750424 chr17 42754418 43048316 293899 - 0 GC AG 0 0 ,60656:1 1 1 1.000 1.000 4 TCGA:I 14750428 chr17 42754503 43190277 435775 - 0 GC AG 0 0 ,60034:1,60057:2,60116:1,60124:1,60231:1,60303:1,60437:1,60607:1,60626:1,60653:1,60682:1,60804:1,60838:1,60919:1,60928:1,61010:1,61085:1,61149:1,61167:1,61210:1,61235:1,61249:1,61281:1,61424:1,61458:1,61508:1,61536:1,61543:1,61580:1,61644:1,61691:1,61905:1,61909:3,61961:1,61978:2,62049:1,62133:1,62258:2,62263:1,62405:1,62545:1,62557:1,62599:1,62796:1,62831:1,62923:1,62951:1,63039:1,63065:1,63069:1,63106:1,63142:1,63168:1,63300:1,63329:1,63371:2,63637:1,63645:1,63663:1,63671:1,63684:1,63685:1,63692:1,63819:1,64299:1,64331:1,64334:2,64540:1,64550:1,64591:2,64615:1,64621:1,64741:1,64743:1,64780:1,64799:1,64857:2,64950:1,64963:1,65008:1,65017:1,65104:1,65185:2,65272:1,65433:1,65442:1,65682:1,65760:1,65959:1,66026:1,66126:1,66171:1,66172:2,66213:1,66243:1,66309:1,66316:1,66463:3,66601:1,66659:1,66670:1,66763:1,66813:1,66911:1,66912:1,66913:1,66922:1,66938:1,66990:1,67019:1,67098:1,67112:1,67114:1,67163:1,67181:1,67210:1,67242:1,67353:1,67381:1,67425:1,67465:1,67519:1,67549:1,67557:1,67664:1,67679:1,67799:1,67860:1,67913:2,68018:1,68047:1,68144:6,68168:1,68178:1,68239:2,68264:1,68266:1,68273:2,68277:1,68300:1,68347:2,68377:1,68510:1,68517:1,68518:1,68538:1,68594:2,68694:1,68783:1,68834:1,68998:1,69039:1,69089:1,69184:1,69254:1,69290:1,69383:1,69409:1,69495:1,69535:1,69543:1,69586:1,69722:1,69724:1,69740:1,69793:1,69794:1,69829:1,69891:1,69927:1,69961:1,70027:1,70041:1,70080:1,70091:1,70175:1,70253:1,70267:1,70305:1,70413:2,70428:1,70643:1,70661:1,70706:1,70834:1,70838:1,70901:1,70971:1 188 212 1.128 1.000 4 TCGA:I 14750430 chr17 42754507 43173498 418992 + 0 GC AG 0 0 ,67061:1,69379:1 2 2 1.000 1.000 4 TCGA:I 14750479 chr17 42755921 43200474 444554 + 0 GC AG 0 0 ,59808:1 1 1 1.000 1.000 4 TCGA:I 14750498 chr17 42756470 43189734 433265 + 0 AT AC 0 0 ,66827:1 1 1 1.000 1.000 4 TCGA:I 14750512 chr17 42756973 43144807 387835 + 0 GT AG 0 0 ,60849:2,66912:1 2 3 1.500 1.500 4 TCGA:I 14750513 chr17 42756975 43108491 351517 - 0 GC AG 0 0 ,60947:1 1 1 1.000 1.000 4 TCGA:I 14750516 chr17 42757089 43144807 387719 + 0 GC AG 0 0 ,62805:1 1 1 1.000 1.000 4 TCGA:I 14750534 chr17 42757959 43110401 352443 - 0 GT AG 0 0 ,68134:1 1 1 1.000 1.000 4 TCGA:I 14750535 chr17 42758003 43131581 373579 - 0 AT AC 0 0 ,60889:1,60900:1,69229:2,69387:1,70461:1 5 6 1.200 1.000 4 TCGA:I 14750546 chr17 42758774 43119191 360418 + 0 GT AG 0 0 ,69149:1 1 1 1.000 1.000 4 TCGA:I 14750548 chr17 42758857 43060436 301580 - 0 GC AG 0 0 ,62680:1 1 1 1.000 1.000 4 TCGA:I 14750558 chr17 42759301 43222672 463372 - 0 GC AG 0 0 ,68226:1 1 1 1.000 1.000 4 TCGA:I 14750559 chr17 42759307 43222678 463372 - 0 GT AG 0 0 ,68226:1 1 1 1.000 1.000 4 TCGA:I 14750562 chr17 42759407 43050878 291472 - 0 AT AC 0 0 ,59839:1 1 1 1.000 1.000 4 TCGA:I 14750598 chr17 42760654 43082487 321834 + 0 GC AG 0 0 ,68417:1 1 1 1.000 1.000 4 TCGA:I 14750640 chr17 42761063 43200368 439306 + 0 GC AG 0 0 ,62589:1 1 1 1.000 1.000 4 TCGA:I 14750717 chr17 42761501 43220693 459193 - 0 GC AG 0 0 ,60880:1 1 1 1.000 1.000 4 TCGA:I 14750794 chr17 42762174 43142329 380156 + 0 AT AC 0 0 ,63818:1 1 1 1.000 1.000 4 TCGA:I 14750884 chr17 42762735 43090234 327500 - 0 GT AG 0 0 ,61799:1,69703:1 2 2 1.000 1.000 4 TCGA:I 14750892 chr17 42762757 43193910 431154 + 0 GT AG 0 0 ,61519:1 1 1 1.000 1.000 4 TCGA:I 14750939 chr17 42762879 43138469 375591 - 0 AT AC 0 0 ,65676:1 1 1 1.000 1.000 4 TCGA:I 14750960 chr17 42762935 43146772 383838 - 0 GC AG 0 0 ,62495:1 1 1 1.000 1.000 4 TCGA:I 14750971 chr17 42762986 43228580 465595 + 0 GT AG 0 0 ,61096:1,63011:2,69528:1 3 4 1.333 1.000 4 TCGA:I 14750972 chr17 42763043 43212316 449274 + 0 GT AG 0 0 ,71054:1 1 1 1.000 1.000 4 TCGA:I 14750973 chr17 42763158 43143879 380722 - 0 GT AG 0 0 ,61489:1,61834:1,66675:1,67778:1,67801:1,69483:1,70364:1 7 7 1.000 1.000 4 TCGA:I 14750983 chr17 42763878 43045081 281204 + 0 GC AG 0 0 ,59914:1,60030:1,60233:1,60252:1,60328:3,60780:1,60848:1,61068:1,61070:1,61127:1,61205:1,61374:3,61442:1,61617:1,61630:1,61974:1,62514:1,62619:1,63153:1,63383:1,63391:1,63521:2,63562:1,63708:2,64036:1,64037:1,64357:2,64467:1,64590:1,64666:1,64744:1,64837:1,64956:1,64990:1,65026:1,65040:1,65087:1,65156:1,65211:1,65300:1,65310:1,65552:1,65816:1,66272:2,66302:1,66547:1,66982:1,66985:1,67420:1,67459:1,67555:1,68027:1,68106:3,68128:1,68427:2,68977:1,69116:3,69255:1,69281:1,69306:1,69544:1,69723:1,69737:1,69805:2,70250:1,70506:1,70528:1,70593:1,70857:1 69 83 1.203 1.000 4 TCGA:I 14750984 chr17 42763878 43116796 352919 + 0 GC AG 0 0 ,60175:1,60534:1,60753:1,60917:1,60988:1,61096:1,62082:2,62332:1,62376:1,62441:1,62458:1,62460:1,62512:1,62636:1,62929:2,63101:1,64071:1,64148:2,64361:1,64525:2,65206:2,65420:2,65859:1,65948:1,65994:1,66187:1,66632:1,67344:1,67422:1,67602:1,67995:1,68168:1,68254:1,68305:1,68542:2,68700:1,68702:1,68908:1,68910:2,69167:2,69422:2,70064:1,70601:1,70760:1,70789:1,71015:1,71073:1 47 57 1.213 1.000 4 TCGA:I 14750985 chr17 42763878 43149377 385500 + 0 GC AG 0 0 ,60469:1,61228:1,61716:1,64952:1,66137:5,66194:1,66489:1,68477:1,69206:1,69753:1 10 14 1.400 1.000 4 TCGA:I 14750986 chr17 42763878 43155357 391480 + 0 GC AG 0 0 ,66095:1,66187:1 2 2 1.000 1.000 4 TCGA:I 14750987 chr17 42763878 43204215 440338 + 0 GC AG 0 0 ,62338:1 1 1 1.000 1.000 4 TCGA:I 14750990 chr17 42764050 43044946 280897 + 0 GT AG 0 0 ,62809:1 1 1 1.000 1.000 4 TCGA:I 14750992 chr17 42764139 43123580 359442 - 0 GT AG 0 0 ,66903:1 1 1 1.000 1.000 4 TCGA:I 14750996 chr17 42764250 43183094 418845 - 0 AT AC 0 0 ,69994:1 1 1 1.000 1.000 4 TCGA:I 14750997 chr17 42764259 43183103 418845 + 0 GC AG 0 0 ,69994:1 1 1 1.000 1.000 4 TCGA:I 14751005 chr17 42765728 43181697 415970 - 0 AT AC 0 0 ,59962:1 1 1 1.000 1.000 4 TCGA:I 14751019 chr17 42766084 43204876 438793 + 0 GT AG 0 0 ,68294:1 1 1 1.000 1.000 4 TCGA:I 14751027 chr17 42766394 43061696 295303 - 0 GC AG 0 0 ,59879:1 1 1 1.000 1.000 4 TCGA:I 14751028 chr17 42766400 43061702 295303 - 0 GC AG 0 0 ,59879:1 1 1 1.000 1.000 4 TCGA:I 14751029 chr17 42766423 43112232 345810 + 0 GC AG 0 0 ,65021:1 1 1 1.000 1.000 4 TCGA:I 14751031 chr17 42766427 43112236 345810 - 0 AT AC 0 0 ,65021:1 1 1 1.000 1.000 4 TCGA:I 14751034 chr17 42766665 43233290 466626 + 0 GC AG 0 0 ,62078:1 1 1 1.000 1.000 4 TCGA:I 14751035 chr17 42766684 43204889 438206 - 0 GT AG 0 0 ,68364:1 1 1 1.000 1.000 4 TCGA:I 14751051 chr17 42766947 43204555 437609 - 0 GT AG 0 0 ,61817:1 1 1 1.000 1.000 4 TCGA:I 14751057 chr17 42767214 43131734 364521 + 0 GC AG 0 0 ,61839:1,64238:1 2 2 1.000 1.000 4 TCGA:I 14751058 chr17 42767214 43206668 439455 + 0 GC AG 0 0 ,62466:1,63007:1,63772:1,64417:1,66327:1,68132:1 6 6 1.000 1.000 4 TCGA:I 14751064 chr17 42767883 43130524 362642 + 0 GC AG 0 0 ,70143:1 1 1 1.000 1.000 4 TCGA:I 14751066 chr17 42768156 43196967 428812 + 0 GC AG 0 0 ,60103:1,60108:1,60198:1,60341:1,60543:1,60578:1,60860:1,61125:1,61132:1,61632:1,61825:1,62144:1,62253:1,62397:1,62562:1,62563:1,62595:1,62859:1,63040:1,63174:1,63254:1,63346:1,63448:1,63815:1,63831:1,63985:1,64083:1,64289:1,64352:1,64360:1,64361:1,64390:1,64436:1,64706:1,65138:1,65292:1,65767:1,66157:1,66172:1,66221:1,66313:1,66685:1,66714:1,66844:1,66859:1,67018:1,67031:1,67041:1,67105:1,67125:1,67359:1,67418:1,67469:1,67490:1,67736:1,67801:1,68286:1,68436:1,68531:1,68575:1,68596:1,68725:1,69081:1,69183:1,69511:1,69645:1,69781:1,69903:1,70055:1,70062:1,70108:1,70303:1,70390:1,70756:1,70808:1 75 75 1.000 1.000 4 TCGA:I 14751071 chr17 42768276 43099675 331400 - 0 GC AG 0 0 ,66778:1,69019:1 2 2 1.000 1.000 4 TCGA:I 14751075 chr17 42768503 43233771 465269 + 0 AT AC 0 0 ,70029:1 1 1 1.000 1.000 4 TCGA:I 14751084 chr17 42768730 43159173 390444 - 0 GC AG 0 0 ,69968:1 1 1 1.000 1.000 4 TCGA:I 14751091 chr17 42769008 43096274 327267 + 0 GC AG 0 0 ,66961:1 1 1 1.000 1.000 4 TCGA:I 14751092 chr17 42769008 43196019 427012 + 0 GC AG 0 0 ,70185:1 1 1 1.000 1.000 4 TCGA:I 14751093 chr17 42769008 43220865 451858 + 0 GC AG 0 0 ,63040:1 1 1 1.000 1.000 4 TCGA:I 14751095 chr17 42769014 43096280 327267 + 0 GC AG 0 0 ,66961:1 1 1 1.000 1.000 4 TCGA:I 14751096 chr17 42769014 43196025 427012 + 0 GC AG 0 0 ,70185:1 1 1 1.000 1.000 4 TCGA:I 14751097 chr17 42769014 43220871 451858 + 0 GC AG 0 0 ,63040:1 1 1 1.000 1.000 4 TCGA:I 14751099 chr17 42769189 43193419 424231 + 0 GC AG 0 0 ,69682:1 1 1 1.000 1.000 4 TCGA:I 14751104 chr17 42769367 43205775 436409 + 0 GC AG 0 0 ,60429:1 1 1 1.000 1.000 4 TCGA:I 14751108 chr17 42769467 43185084 415618 - 0 GT AG 0 0 ,60655:1,61789:1,62517:1,63018:1,63263:1,64335:1,64528:1,64612:1,65957:1,66615:1,66767:1,66798:1,67043:1,69478:1,70510:1 15 15 1.000 1.000 4 TCGA:I 14751109 chr17 42769519 43231018 461500 - 0 GT AG 0 0 ,62747:1,63031:1,63706:1,63801:1,65283:1,65297:1,65909:1,66316:1,66838:1,69761:2,70199:1,71003:1 12 13 1.083 1.000 4 TCGA:I 14751112 chr17 42769542 43201942 432401 + 0 GC AG 0 0 ,61071:1,69410:1 2 2 1.000 1.000 4 TCGA:I 14751113 chr17 42769548 43201948 432401 + 0 GC AG 0 0 ,61071:1,69410:1 2 2 1.000 1.000 4 TCGA:I 14751114 chr17 42769552 43201952 432401 + 0 GC AG 0 0 ,61071:1,69410:1 2 2 1.000 1.000 4 TCGA:I 14751120 chr17 42770047 43132697 362651 - 0 GC AG 0 0 ,60505:1 1 1 1.000 1.000 4 TCGA:I 14751121 chr17 42770070 43132906 362837 + 0 GC AG 0 0 ,63530:1 1 1 1.000 1.000 4 TCGA:I 14751122 chr17 42770261 43193347 423087 + 0 GT AG 0 aC19,cG19,cG38,gC19,gC38,kG19,kG38,mG19,mG38,rG19,rG38,sG19,sG38 ,65339:1 1 1 1.000 1.000 4 TCGA:I 14751128 chr17 42770480 43150229 379750 - 0 GC AG 0 0 ,67550:1 1 1 1.000 1.000 4 TCGA:I 14751137 chr17 42770640 43229443 458804 + 0 GT AG 0 0 ,60993:3,61379:1,64046:1,64922:1,69453:1,70908:1 6 8 1.333 1.000 4 TCGA:I 14751138 chr17 42770661 43229464 458804 - 0 GC AG 0 0 ,60993:3,61379:1,64046:1,64922:1,69453:1,70908:1 6 8 1.333 1.000 4 TCGA:I 14751139 chr17 42770711 43207402 436692 + 0 GC AG 0 0 ,69635:1 1 1 1.000 1.000 4 TCGA:I 14751141 chr17 42770786 43062349 291564 - 0 GC AG 0 0 ,68075:1,69188:1 2 2 1.000 1.000 4 TCGA:I 14751154 chr17 42771458 43102609 331152 - 0 GC AG 0 0 ,60428:1 1 1 1.000 1.000 4 TCGA:I 14751155 chr17 42771724 43046632 274909 - 0 AT AC 0 0 ,63874:1 1 1 1.000 1.000 4 TCGA:I 14751174 chr17 42772892 43071882 298991 - 0 GC AG 0 0 ,65653:2 1 2 2.000 2.000 4 TCGA:I 14751184 chr17 42773242 43200170 426929 + 0 AT AC 0 0 ,65877:1 1 1 1.000 1.000 4 TCGA:I 14751220 chr17 42773562 43263704 490143 - 0 GT AG 0 0 ,62401:1,64656:1,68197:1 3 3 1.000 1.000 4 TCGA:I 14751223 chr17 42773698 43189075 415378 - 0 GC AG 0 0 ,62763:1 1 1 1.000 1.000 4 TCGA:I 14751297 chr17 42774303 43193235 418933 + 0 GC AG 0 0 ,61435:1 1 1 1.000 1.000 4 TCGA:I 14751339 chr17 42774900 43216066 441167 - 0 GC AG 0 0 ,64828:1,69144:1 2 2 1.000 1.000 4 TCGA:I 14751345 chr17 42775071 43199111 424041 + 0 GT AG 0 0 ,63040:1,65727:1,66499:3 3 5 1.667 1.000 4 TCGA:I 14751417 chr17 42776007 43191453 415447 + 0 GT AG 0 0 ,66584:1 1 1 1.000 1.000 4 TCGA:I 14751418 chr17 42776013 43191459 415447 + 0 GT AG 0 0 ,66584:1 1 1 1.000 1.000 4 TCGA:I 14751419 chr17 42776029 43209925 433897 + 0 GT AG 0 0 ,65401:1 1 1 1.000 1.000 4 TCGA:I 14751420 chr17 42776029 43210115 434087 - 0 AT AC 0 0 ,61160:1,61368:2,61464:1,63982:3,65636:1,67859:2 6 10 1.667 1.500 4 TCGA:I 14751468 chr17 42776445 43054824 278380 - 0 GT AG 0 0 ,65917:1 1 1 1.000 1.000 4 TCGA:I 14751491 chr17 42776706 43044848 268143 + 0 GC AG 0 0 ,65476:1 1 1 1.000 1.000 4 TCGA:I 14751518 chr17 42778019 43210998 432980 + 0 GT AG 0 0 ,60039:1 1 1 1.000 1.000 4 TCGA:I 14751534 chr17 42778266 43100813 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5859 11639 1.987 2.000 4 TCGA:I 14751936 chr17 42779503 43045677 266175 + 0 GC AG 0 0 ,61817:1 1 1 1.000 1.000 4 TCGA:I 14751939 chr17 42779508 43259903 480396 - 0 GC AG 0 0 ,60238:1,66662:1 2 2 1.000 1.000 4 TCGA:I 14751952 chr17 42780070 43232379 452310 + 0 GC AG 0 0 ,67442:1 1 1 1.000 1.000 4 TCGA:I 14751953 chr17 42780070 43274723 494654 + 0 GC AG 0 0 ,70131:1 1 1 1.000 1.000 4 TCGA:I 14751974 chr17 42780463 43212251 431789 + 0 GC AG 0 0 ,60074:1 1 1 1.000 1.000 4 TCGA:I 14752001 chr17 42780775 43231817 451043 - 0 GC AG 0 0 ,62999:1,69121:1 2 2 1.000 1.000 4 TCGA:I 14752002 chr17 42780775 43233985 453211 - 0 GC AG 0 0 ,66778:1 1 1 1.000 1.000 4 TCGA:I 14752011 chr17 42780846 43196967 416122 + 0 GC AG 0 0 ,64741:1 1 1 1.000 1.000 4 TCGA:I 14752024 chr17 42780955 43107054 326100 - 0 GT AG 0 0 ,67981:1 1 1 1.000 1.000 4 TCGA:I 14752029 chr17 42780997 43212274 431278 - 0 GC AG 0 0 ,66844:1 1 1 1.000 1.000 4 TCGA:I 14752036 chr17 42781151 43233296 452146 + 0 GC AG 0 0 ,65974:1,68178:1 2 2 1.000 1.000 4 TCGA:I 14752037 chr17 42781151 43251336 470186 + 0 GC AG 0 0 ,68273:1 1 1 1.000 1.000 4 TCGA:I 14752043 chr17 42781188 43134938 353751 + 0 GC AG 0 0 ,60524:1,60658:1,61000:1,62005:1,62030:1,62316:1,65788:1,68334:1,68510:1,69628:1,70325:1 11 11 1.000 1.000 4 TCGA:I 14752144 chr17 42783002 43103993 320992 + 0 GC AG 0 0 ,64696:1 1 1 1.000 1.000 4 TCGA:I 14752170 chr17 42783369 43230507 447139 - 0 GT AG 0 0 ,62413:1 1 1 1.000 1.000 4 TCGA:I 14752172 chr17 42783399 43197838 414440 + 0 GC AG 0 0 ,65751:1 1 1 1.000 1.000 4 TCGA:I 14752176 chr17 42783498 43124700 341203 - 0 GT AG 0 0 ,62295:1,65387:3,66113:1 3 5 1.667 1.000 4 TCGA:I 14752248 chr17 42784960 43210562 425603 + 0 AT AC 0 0 ,66768:1 1 1 1.000 1.000 4 TCGA:I 14752249 chr17 42784979 43216375 431397 + 0 GC AG 0 0 ,70048:1 1 1 1.000 1.000 4 TCGA:I 14752271 chr17 42785266 43139706 354441 + 0 GT AG 0 0 ,62562:1 1 1 1.000 1.000 4 TCGA:I 14752303 chr17 42786061 43068735 282675 + 0 AT AC 0 0 ,70445:2 1 2 2.000 2.000 4 TCGA:I 14752306 chr17 42786222 43210395 424174 + 0 GT AG 0 0 ,66449:1 1 1 1.000 1.000 4 TCGA:I 14752315 chr17 42786536 43047242 260707 + 0 GC AG 0 0 ,67049:1 1 1 1.000 1.000 4 TCGA:I 14752317 chr17 42787053 43092388 305336 - 0 GT AG 0 0 ,70744:1 1 1 1.000 1.000 4 TCGA:I 14752323 chr17 42787121 43134159 347039 + 0 AT AC 0 0 ,60620:1,62752:1,62755:1,67616:1 4 4 1.000 1.000 4 TCGA:I 14752324 chr17 42787129 43134167 347039 - 0 AT AC 0 0 ,60620:1,62752:1,62755:1,67616:1 4 4 1.000 1.000 4 TCGA:I 14752326 chr17 42787201 43102608 315408 + 0 GT AG 0 0 ,68643:1 1 1 1.000 1.000 4 TCGA:I 14752373 chr17 42787850 43234261 446412 - 0 GC AG 0 0 ,64889:1 1 1 1.000 1.000 4 TCGA:I 14752418 chr17 42788472 43231588 443117 + 0 GC AG 0 0 ,60431:1 1 1 1.000 1.000 4 TCGA:I 14752478 chr17 42789376 43089728 300353 + 0 GC AG 0 0 ,63011:1 1 1 1.000 1.000 4 TCGA:I 14752479 chr17 42789376 43208684 419309 + 0 GC AG 0 0 ,61618:1,63035:1,65464:1 3 3 1.000 1.000 4 TCGA:I 14752481 chr17 42789381 43089733 300353 + 0 GC AG 0 0 ,63011:1 1 1 1.000 1.000 4 TCGA:I 14752482 chr17 42789381 43208689 419309 + 0 GC AG 0 0 ,61618:1,63035:1,65464:1 3 3 1.000 1.000 4 TCGA:I 14752487 chr17 42789426 43204578 415153 + 0 GC AG 0 0 ,61880:1 1 1 1.000 1.000 4 TCGA:I 14752490 chr17 42789432 43204584 415153 + 0 GC AG 0 0 ,61880:1 1 1 1.000 1.000 4 TCGA:I 14752492 chr17 42789436 43204588 415153 + 0 GC AG 0 0 ,61880:1 1 1 1.000 1.000 4 TCGA:I 14752515 chr17 42789904 43159148 369245 + 0 GC AG 0 0 ,69422:1 1 1 1.000 1.000 4 TCGA:I 14752518 chr17 42789910 43159154 369245 + 0 GT AG 0 0 ,69422:1 1 1 1.000 1.000 4 TCGA:I 14752522 chr17 42789979 43106091 316113 - 0 GC AG 0 0 ,66192:1 1 1 1.000 1.000 4 TCGA:I 14752540 chr17 42790572 43117377 326806 + 0 GT AG 0 0 ,67872:1 1 1 1.000 1.000 4 TCGA:I 14752551 chr17 42791123 43209905 418783 - 0 AT AC 0 0 ,67553:1 1 1 1.000 1.000 4 TCGA:I 14752563 chr17 42791421 43168419 376999 - 0 GT AG 0 0 ,60155:1,61273:1,64156:2,65082:1,65571:1,67155:2 6 8 1.333 1.000 4 TCGA:I 14752565 chr17 42791426 43168424 376999 + 0 GT AG 0 0 ,60155:1,61273:1,64156:2,65082:1,65571:1,67155:2 6 8 1.333 1.000 4 TCGA:I 14752568 chr17 42791446 43053776 262331 - 0 GC AG 0 0 ,60857:1,61294:1,61402:1,66358:3,67376:1,68314:1,69036:1,70791:1 8 10 1.250 1.000 4 TCGA:I 14752569 chr17 42791446 43168444 376999 - 0 GC AG 0 0 ,59989:1,60525:1,63405:1,65571:1,67098:1,67537:1 6 6 1.000 1.000 4 TCGA:I 14752570 chr17 42791446 43169472 378027 - 0 GC AG 0 0 ,61204:3,69479:1 2 4 2.000 2.000 4 TCGA:I 14752578 chr17 42791855 43117642 325788 + 0 GC AG 0 0 ,63202:1 1 1 1.000 1.000 4 TCGA:I 14752584 chr17 42792577 43210528 417952 + 0 AT AC 0 0 ,62348:1,62820:1,64034:1,66361:1,68168:1,69289:1 6 6 1.000 1.000 4 TCGA:I 14752587 chr17 42792954 43200170 407217 - 0 GT AG 0 0 ,66819:1 1 1 1.000 1.000 4 TCGA:I 14752588 chr17 42793053 43164916 371864 - 0 AT AC 0 0 ,63738:1 1 1 1.000 1.000 4 TCGA:I 14752591 chr17 42793212 43210413 417202 - 0 AT AC 0 0 ,68877:1 1 1 1.000 1.000 4 TCGA:I 14752596 chr17 42793325 43044917 251593 - 0 GC AG 0 0 ,67273:1 1 1 1.000 1.000 4 TCGA:I 14752598 chr17 42793331 43044923 251593 - 0 GC AG 0 0 ,67273:1 1 1 1.000 1.000 4 TCGA:I 14752642 chr17 42793973 43182109 388137 - 0 GC AG 0 0 ,64251:2,65149:1 2 3 1.500 1.500 4 TCGA:I 14752643 chr17 42793973 43237570 443598 - 0 GC AG 0 0 ,68703:1 1 1 1.000 1.000 4 TCGA:I 14752758 chr17 42795024 43140556 345533 + 0 GC AG 0 0 ,67446:1 1 1 1.000 1.000 4 TCGA:I 14752805 chr17 42795242 43194966 399725 - 0 GT AG 0 0 ,61394:1,68859:1 2 2 1.000 1.000 4 TCGA:I 14752854 chr17 42795502 43219959 424458 + 0 GC AG 0 0 ,60974:1,61281:1,61543:2,62427:1,62526:1,62658:1,62897:1,62982:1,63287:1,63340:1,63358:1,63485:1,63609:1,64163:1,64434:1,64857:1,65889:1,66086:1,67050:1,68039:1,68169:1,68347:1,68378:1,68504:1,68592:1,68682:1,68843:2,69218:1,69383:1,69730:1,69984:1,70344:1,70350:1 33 35 1.061 1.000 4 TCGA:I 14752966 chr17 42796279 43224114 427836 - 0 GT AG 0 0 ,70078:1 1 1 1.000 1.000 4 TCGA:I 14752976 chr17 42796317 43229073 432757 + 0 GC AG 0 0 ,64332:1 1 1 1.000 1.000 4 TCGA:I 14753291 chr17 42797945 43099847 301903 + 0 GT AG 0 0 ,62120:1,63265:1 2 2 1.000 1.000 4 TCGA:I 14753301 chr17 42797957 43077312 279356 + 0 GC AG 0 0 ,63756:1 1 1 1.000 1.000 4 TCGA:I 14753302 chr17 42797957 43194436 396480 + 0 GC AG 0 0 ,69918:1 1 1 1.000 1.000 4 TCGA:I 14753385 chr17 42798126 43217753 419628 - 0 GC AG 0 0 ,65331:1 1 1 1.000 1.000 4 TCGA:I 14753410 chr17 42798158 43211526 413369 + 0 GT AG 0 0 ,63466:1 1 1 1.000 1.000 4 TCGA:I 14753464 chr17 42798582 43145832 347251 + 0 GC AG 0 0 ,59763:1,59768:1,60074:1,60414:1,60463:1,60534:1,60599:1,61404:1,61503:1,62171:1,62343:1,62499:1,62606:1,62819:1,62888:1,62969:1,63167:1,63685:1,64309:1,64664:1,64865:1,65832:1,66184:1,66417:1,67305:1,67367:1,67446:1,67509:1,68091:1,68151:1,68159:1,68336:1,68412:1,68427:1,68470:1,68615:1,68679:1,68768:1,68786:1,68843:1,68894:1,69116:1,69571:1,69632:1,69657:2,69800:1,70231:1,70478:1,70527:1,70553:1,70639:1,70815:1,70881:1 53 54 1.019 1.000 4 TCGA:I 14753479 chr17 42798665 43145832 347168 + 0 GC AG 0 0 ,60940:1,63413:1,64892:1,69173:1,69357:1,71085:1 6 6 1.000 1.000 4 TCGA:I 14753481 chr17 42798680 43085607 286928 + 0 AT AC 0 0 ,64798:1,70596:1 2 2 1.000 1.000 4 TCGA:I 14753484 chr17 42798682 43069096 270415 - 0 AT AC 0 0 ,71071:1 1 1 1.000 1.000 4 TCGA:I 14753485 chr17 42798682 43171210 372529 - 0 AT AC 0 0 ,64517:1 1 1 1.000 1.000 4 TCGA:I 14753493 chr17 42798708 43210270 411563 + 0 GC AG 0 0 ,70703:1 1 1 1.000 1.000 4 TCGA:I 14753504 chr17 42798915 43211538 412624 + 0 GT AG 0 0 ,63223:1 1 1 1.000 1.000 4 TCGA:I 14753553 chr17 42799939 43198835 398897 - 0 GC AG 0 0 ,69455:1,69614:1 2 2 1.000 1.000 4 TCGA:I 14753558 chr17 42800586 43179585 379000 - 0 AT AC 0 0 ,69813:1 1 1 1.000 1.000 4 TCGA:I 14753560 chr17 42800761 43136288 335528 + 0 GT AG 0 0 ,62638:1 1 1 1.000 1.000 4 TCGA:I 14753561 chr17 42800774 43136301 335528 + 0 AT AC 0 0 ,62638:1 1 1 1.000 1.000 4 TCGA:I 14753563 chr17 42800911 43154209 353299 + 0 GC AG 0 0 ,68114:1 1 1 1.000 1.000 4 TCGA:I 14753566 chr17 42801089 43071911 270823 + 0 GC AG 0 0 ,60120:1,63700:1,64773:1,65003:1,65053:1 5 5 1.000 1.000 4 TCGA:I 14753570 chr17 42801303 43144827 343525 - 0 GC AG 0 0 ,67340:1 1 1 1.000 1.000 4 TCGA:I 14753572 chr17 42801312 43144836 343525 + 0 AT AC 0 0 ,67340:1 1 1 1.000 1.000 4 TCGA:I 14753575 chr17 42801469 43057483 256015 - 0 GC AG 0 0 ,62261:1 1 1 1.000 1.000 4 TCGA:I 14753576 chr17 42801469 43089979 288511 - 0 GC AG 0 0 ,61234:1,61562:1,68586:1,70970:1 4 4 1.000 1.000 4 TCGA:I 14753583 chr17 42801780 43191453 389674 + 0 GT AG 0 0 ,61169:1,63750:1,68931:1 3 3 1.000 1.000 4 TCGA:I 14753586 chr17 42802365 43152331 349967 - 0 GT AG 0 0 ,69456:1 1 1 1.000 1.000 4 TCGA:I 14753587 chr17 42802668 43211237 408570 + 0 AT AC 0 0 ,61547:1,68207:1,68873:1 3 3 1.000 1.000 4 TCGA:I 14753595 chr17 42803426 43102190 298765 - 0 GC AG 0 0 ,62741:1 1 1 1.000 1.000 4 TCGA:I 14753596 chr17 42803456 43068917 265462 + 0 GC AG 0 0 ,60554:1,61738:1,63848:1 3 3 1.000 1.000 4 TCGA:I 14753608 chr17 42804250 43196976 392727 + 0 AT AC 0 0 ,60400:1 1 1 1.000 1.000 4 TCGA:I 14753621 chr17 42805043 43210643 405601 - 0 GT AG 0 0 ,65889:1 1 1 1.000 1.000 4 TCGA:I 14753622 chr17 42805097 43189041 383945 + 0 GC AG 0 aC19,cG19,cG38,gC19,gC38,kG19,kG38,mG19,mG38,rG19,rG38,sG19,sG38 ,63292:1 1 1 1.000 1.000 4 TCGA:I 14753661 chr17 42806329 43136174 329846 + 0 GT AG 0 0 ,65458:1 1 1 1.000 1.000 4 TCGA:I 14753708 chr17 42808376 43241771 433396 - 0 GT AG 0 0 ,61442:1 1 1 1.000 1.000 4 TCGA:I 14753710 chr17 42808449 43151652 343204 + 0 GC AG 0 0 ,64271:1 1 1 1.000 1.000 4 TCGA:I 14753711 chr17 42808449 43237301 428853 + 0 GC AG 0 0 ,60958:1,63715:1,66671:1,66989:2,67130:1 5 6 1.200 1.000 4 TCGA:I 14753713 chr17 42808455 43151658 343204 + 0 GT AG 0 0 ,64271:1 1 1 1.000 1.000 4 TCGA:I 14753714 chr17 42808467 43151560 343094 - 0 GT AG 0 0 ,66224:1 1 1 1.000 1.000 4 TCGA:I 14753718 chr17 42808767 43193507 384741 + 0 GC AG 0 0 ,61803:1 1 1 1.000 1.000 4 TCGA:I 14753719 chr17 42808772 43193512 384741 + 0 GC AG 0 0 ,61803:1 1 1 1.000 1.000 4 TCGA:I 14753722 chr17 42808801 43151642 342842 + 0 AT AC 0 0 ,61027:1,64297:1 2 2 1.000 1.000 4 TCGA:I 14753723 chr17 42808811 43151652 342842 + 0 GC AG 0 0 ,61027:1,64297:1 2 2 1.000 1.000 4 TCGA:I 14753725 chr17 42808817 43151658 342842 + 0 GC AG 0 0 ,61027:1,64297:1 2 2 1.000 1.000 4 TCGA:I 14753734 chr17 42809400 43074341 264942 - 0 GC AG 0 0 ,61233:1,65612:1,66203:1,67667:1 4 4 1.000 1.000 4 TCGA:I 14753741 chr17 42809587 43233750 424164 - 0 GT AG 0 0 ,68445:1 1 1 1.000 1.000 4 TCGA:I 14753890 chr17 42810365 43145711 335347 - 0 GT AG 0 0 ,66574:2 1 2 2.000 2.000 4 TCGA:I 14753939 chr17 42810578 43189915 379338 - 0 AT AC 0 0 ,69217:1 1 1 1.000 1.000 4 TCGA:I 14753948 chr17 42810605 43134159 323555 + 0 AT AC 0 0 ,63736:1 1 1 1.000 1.000 4 TCGA:I 14753949 chr17 42810605 43196510 385906 + 0 AT AC 0 0 ,63556:1 1 1 1.000 1.000 4 TCGA:I 14753956 chr17 42810632 43081820 271189 - 0 AT AC 0 0 ,64051:1 1 1 1.000 1.000 4 TCGA:I 14753957 chr17 42810632 43210413 399782 - 0 AT AC 0 0 ,61253:1,61618:1 2 2 1.000 1.000 4 TCGA:I 14753985 chr17 42810728 43083697 272970 - 0 GC AG 0 0 ,63223:1 1 1 1.000 1.000 4 TCGA:I 14754046 chr17 42810922 43093273 282352 + 0 AT AC 0 0 ,67254:1,68846:1 2 2 1.000 1.000 4 TCGA:I 14754080 chr17 42810929 43057051 246123 - 0 GT AG aC19,cG19,cG38,gC19,gC38,kG19,kG38,mG19,mG38,rG19,rG38,sG19,sG38 aC19,cG19,cG38,gC19,gC38,kG19,kG38,mG19,mG38,rG19,rG38,sG19,sG38,vG19 ,64607:1 1 1 1.000 1.000 4 TCGA:I 14754081 chr17 42810929 43170125 359197 - 0 GT AG aC19,cG19,cG38,gC19,gC38,kG19,kG38,mG19,mG38,rG19,rG38,sG19,sG38 aC19,gC19,gC38,kG19,kG38,rG19,rG38,sG19,sG38 ,61676:1 1 1 1.000 1.000 4 TCGA:I 14754088 chr17 42811096 43209415 398320 - 0 GC AG 0 0 ,60692:1 1 1 1.000 1.000 4 TCGA:I 14754120 chr17 42811453 43219095 407643 + 0 AT AC 0 0 ,67034:1 1 1 1.000 1.000 4 TCGA:I 14754151 chr17 42811693 43308871 497179 - 0 GT AG 0 0 ,64272:1 1 1 1.000 1.000 4 TCGA:I 14754207 chr17 42811798 43148164 336367 - 0 GC AG aC19,cG19,cG38,gC19,gC38,kG19,kG38,mG19,mG38,rG19,rG38,sG19,sG38 0 ,69221:1 1 1 1.000 1.000 4 TCGA:I 14754233 chr17 42812231 43140043 327813 - 0 GT AG 0 0 ,61007:1,63188:1 2 2 1.000 1.000 4 TCGA:I 14754238 chr17 42812259 43148164 335906 - 0 GC AG 0 0 ,61750:1,62215:1,66517:1,69528:1 4 4 1.000 1.000 4 TCGA:I 14754262 chr17 42812454 43137926 325473 - 0 GT AG 0 0 ,60864:1 1 1 1.000 1.000 4 TCGA:I 14754282 chr17 42812619 43200276 387658 + 0 GC AG 0 0 ,65003:1,70130:1 2 2 1.000 1.000 4 TCGA:I 14754295 chr17 42812644 43198885 386242 - 0 GT AG 0 0 ,64012:1 1 1 1.000 1.000 4 TCGA:I 14754296 chr17 42812644 43238315 425672 - 0 GC AG 0 0 ,62376:1 1 1 1.000 1.000 4 TCGA:I 14754303 chr17 42812651 43198892 386242 + 0 GC AG 0 0 ,64012:1 1 1 1.000 1.000 4 TCGA:I 14754324 chr17 42812978 43102045 289068 + 0 GC AG 0 0 ,62197:1,66109:1,67442:1,68825:1,69554:1 5 5 1.000 1.000 4 TCGA:I 14754391 chr17 42814557 43178170 363614 + 0 GC AG 0 0 ,62548:1,65402:1,70378:1 3 3 1.000 1.000 4 TCGA:I 14754469 chr17 42814855 43210113 395259 + 0 GC AG 0 0 ,63074:1 1 1 1.000 1.000 4 TCGA:I 14754470 chr17 42814869 43233750 418882 - 0 GT AG 0 0 ,69598:1,70171:1 2 2 1.000 1.000 4 TCGA:I 14754473 chr17 42815132 43196496 381365 - 0 AT AC 0 0 ,68434:1 1 1 1.000 1.000 4 TCGA:I 14754475 chr17 42815143 43196507 381365 - 0 GC AG 0 0 ,68434:1 1 1 1.000 1.000 4 TCGA:I 14754562 chr17 42816055 43057051 240997 - 0 GT AG aC19,cG19,cG38,gC19,gC38,kG19,kG38,mG19,mG38,rG19,rG38,sG19,sG38 aC19,cG19,cG38,gC19,gC38,kG19,kG38,mG19,mG38,rG19,rG38,sG19,sG38,vG19 ,60880:8 1 8 8.000 8.000 4 TCGA:I 14754614 chr17 42817625 43310133 492509 - 0 GT AG 0 0 ,66977:1 1 1 1.000 1.000 4 TCGA:I 14754682 chr17 42818326 43237982 419657 - 0 GC AG 0 0 ,62679:1 1 1 1.000 1.000 4 TCGA:I 14754707 chr17 42818359 43056065 237707 + 0 AT AC 0 0 ,60727:1 1 1 1.000 1.000 4 TCGA:I 14754739 chr17 42818382 43210352 391971 - 0 GT AG 0 0 ,70175:1 1 1 1.000 1.000 4 TCGA:I 14754776 chr17 42818583 43045714 227132 + 0 GT AG 0 0 ,60527:1,61215:1,61303:1,61615:1,61662:1,62090:1,62368:1,62675:1,62995:3,63106:1,64822:1,65099:1,65993:1,66667:1,66710:1,67122:1,67546:1,67605:2,67741:1,67877:1,67891:1,69363:1,69664:1,69843:1,70267:1,70300:1,70397:1,70476:1,70809:1,70923:1,71109:1 31 34 1.097 1.000 4 TCGA:I 14754809 chr17 42818669 43079452 260784 + 0 GT AG 0 0 ,61827:1 1 1 1.000 1.000 4 TCGA:I 14754838 chr17 42818752 43200415 381664 + 0 GC AG 0 0 ,60606:1,63115:1,63338:1,65279:1,66853:1,66994:1,69298:1,69701:1,69744:1,69880:1,71087:1 11 11 1.000 1.000 4 TCGA:I 14754839 chr17 42818752 43217780 399029 + 0 GC AG 0 0 ,71063:1 1 1 1.000 1.000 4 TCGA:I 14754841 chr17 42818754 43200417 381664 - 0 GC AG 0 0 ,60606:1,63115:1,63338:1,65279:1,66853:1,66994:1,69298:1,69701:1,69744:1,69880:1,71087:1 11 11 1.000 1.000 4 TCGA:I 14754909 chr17 42818965 43200462 381498 + 0 GC AG 0 0 ,61456:1,63754:1 2 2 1.000 1.000 4 TCGA:I 14754925 chr17 42819209 43193114 373906 - 0 GT AG 0 0 ,60225:1 1 1 1.000 1.000 4 TCGA:I 14754965 chr17 42820192 43209968 389777 + 0 GC AG 0 0 ,66889:2,69617:5 2 7 3.500 3.500 4 TCGA:I 14754968 chr17 42820588 43193114 372527 - 0 GT AG 0 0 ,60828:1 1 1 1.000 1.000 4 TCGA:I 14755016 chr17 42821333 43237128 415796 + 0 GC AG 0 0 ,67822:1 1 1 1.000 1.000 4 TCGA:I 14755020 chr17 42821477 43169756 348280 - 0 GT AG 0 sG38 ,62054:1 1 1 1.000 1.000 4 TCGA:I 14755040 chr17 42822583 43146299 323717 + 0 AT AC 0 0 ,64164:1,66961:1 2 2 1.000 1.000 4 TCGA:I 14755062 chr17 42823081 43153478 330398 - 0 AT AC 0 0 ,68010:1 1 1 1.000 1.000 4 TCGA:I 14755071 chr17 42823369 43061696 238328 - 0 GC AG 0 0 ,61556:1 1 1 1.000 1.000 4 TCGA:I 14755073 chr17 42823456 43237347 413892 - 0 AT AC 0 0 ,70691:1 1 1 1.000 1.000 4 TCGA:I 14755090 chr17 42823813 43218024 394212 - 0 GC AG 0 0 ,61543:1 1 1 1.000 1.000 4 TCGA:I 14755095 chr17 42823839 43228619 404781 - 0 GT AG 0 0 ,66875:1 1 1 1.000 1.000 4 TCGA:I 14755129 chr17 42823929 43226483 402555 - 0 GT AG 0 0 ,67024:1 1 1 1.000 1.000 4 TCGA:I 14755136 chr17 42823988 43200508 376521 - 0 GC AG 0 0 ,60821:1 1 1 1.000 1.000 4 TCGA:I 14755179 chr17 42824770 43127064 302295 + 0 GC AG 0 0 ,60991:1,62928:1,66720:1,68175:1,68416:1,69599:1 6 6 1.000 1.000 4 TCGA:I 14755209 chr17 42825759 43269745 443987 - 0 GC AG 0 0 ,70917:1 1 1 1.000 1.000 4 TCGA:I 14755213 chr17 42825859 43183641 357783 + 0 GT AG aC19,gC19,gC38,kG19,kG38,sG19,sG38 0 ,67811:1 1 1 1.000 1.000 4 TCGA:I 14755216 chr17 42825929 43141784 315856 - 0 GT AG 0 0 ,65584:1 1 1 1.000 1.000 4 TCGA:I 14755219 chr17 42826650 43264023 437374 - 0 AT AC 0 0 ,65039:1 1 1 1.000 1.000 4 TCGA:I 14755220 chr17 42826695 43065078 238384 - 0 GC AG 0 0 ,64075:1 1 1 1.000 1.000 4 TCGA:I 14755221 chr17 42826701 43065084 238384 - 0 GC AG 0 0 ,64075:1 1 1 1.000 1.000 4 TCGA:I 14755238 chr17 42827719 43127190 299472 + 0 GT AG 0 0 ,60799:1 1 1 1.000 1.000 4 TCGA:I 14755245 chr17 42829044 43204718 375675 + 0 GC AG 0 0 ,70773:1 1 1 1.000 1.000 4 TCGA:I 14755248 chr17 42829338 43218331 388994 - 0 AT AC 0 0 ,62836:1 1 1 1.000 1.000 4 TCGA:I 14755263 chr17 42830876 43210958 380083 + 0 GC AG 0 0 ,68590:1 1 1 1.000 1.000 4 TCGA:I 14755267 chr17 42831518 43210949 379432 + 0 AT AC 0 0 ,64337:1,64918:1,69456:1 3 3 1.000 1.000 4 TCGA:I 14755268 chr17 42831520 43210951 379432 - 0 AT AC 0 0 ,63532:1,63917:1,64334:1,64337:1,64918:1,66471:1,69456:1,70633:1 8 8 1.000 1.000 4 TCGA:I 14755270 chr17 42832137 43193161 361025 - 0 GC AG 0 0 ,66605:1 1 1 1.000 1.000 4 TCGA:I 14755284 chr17 42832933 43055571 222639 + 0 GT AG 0 0 ,64703:1 1 1 1.000 1.000 4 TCGA:I 14755327 chr17 42833465 43233296 399832 + 0 GC AG 0 0 ,60391:1,61626:1,62734:1,63757:1,65236:1,67303:1,70332:1 7 7 1.000 1.000 4 TCGA:I 14755328 chr17 42833465 43245178 411714 + 0 GC AG 0 0 ,65113:1,66851:1 2 2 1.000 1.000 4 TCGA:I 14755332 chr17 42833469 43075860 242392 + 0 GC AG 0 0 ,64342:1 1 1 1.000 1.000 4 TCGA:I 14755333 chr17 42833469 43245178 411710 + 0 GC AG 0 0 ,60375:1,64051:1,68394:1 3 3 1.000 1.000 4 TCGA:I 14755336 chr17 42833480 43194528 361049 + 0 GC AG 0 0 ,65040:1,67185:1,68550:1 3 3 1.000 1.000 4 TCGA:I 14755398 chr17 42833589 43171278 337690 + 0 GC AG 0 0 ,61283:1 1 1 1.000 1.000 4 TCGA:I 14755402 chr17 42833593 43171282 337690 - 0 GC AG 0 0 ,61283:1 1 1 1.000 1.000 4 TCGA:I 14755403 chr17 42833593 43241480 407888 - 0 GC AG 0 0 ,61275:1 1 1 1.000 1.000 4 TCGA:I 14755578 chr17 42834817 43134229 299413 + 0 AT AC 0 0 ,61230:1 1 1 1.000 1.000 4 TCGA:I 14755579 chr17 42834817 43214574 379758 + 0 AT AC 0 0 ,62980:1 1 1 1.000 1.000 4 TCGA:I 14755626 chr17 42835120 43087968 252849 - 0 GC AG 0 0 ,61193:1,63333:1,64092:2,64412:1,65909:1,66378:1,66810:1,67758:2,69161:1 9 11 1.222 1.000 4 TCGA:I 14755629 chr17 42835126 43087974 252849 - 0 GT AG 0 0 ,61193:1,63333:1,64092:2,64412:1,65909:1,66378:1,66810:1,67758:2,69161:1 9 11 1.222 1.000 4 TCGA:I 14755634 chr17 42835152 43319315 484164 - 0 GT AG 0 0 ,60168:1,60598:1,60608:1,60724:1,61233:1,64879:1,64895:1,65633:1,65636:2,67276:1,67331:1,68377:1,69192:1,70319:1 14 15 1.071 1.000 4 TCGA:I 14755640 chr17 42835158 43225153 389996 - 0 GC AG 0 0 ,65027:1 1 1 1.000 1.000 4 TCGA:I 14755662 chr17 42836148 43066553 230406 + 0 GT AG 0 0 ,60777:1,61404:1,63476:1,64137:1,65054:1,68512:2,69767:1 7 8 1.143 1.000 4 TCGA:I 14755664 chr17 42836207 43183422 347216 - 0 AT AC 0 0 ,69803:1 1 1 1.000 1.000 4 TCGA:I 14755686 chr17 42836764 43098709 261946 - 0 AT AC 0 0 ,70521:1 1 1 1.000 1.000 4 TCGA:I 14755720 chr17 42837509 43211628 374120 - 0 AT AC 0 0 ,61615:1 1 1 1.000 1.000 4 TCGA:I 14755721 chr17 42837513 43211632 374120 - 0 AT AC 0 0 ,61615:1 1 1 1.000 1.000 4 TCGA:I 14755743 chr17 42837690 43209415 371726 - 0 GC AG 0 0 ,61761:2,62892:1,63788:1,64038:1,64252:1,66616:1,67396:1,68534:1,68868:1,69680:1,70857:1 11 12 1.091 1.000 4 TCGA:I 14755760 chr17 42837698 43078872 241175 + 0 GT AG aC19,cG19,cG38,gC19,gC38,kG19,kG38,mG19,mG38,rG19,rG38,sG19,sG38 0 ,60629:1,62033:1,62962:1,63775:1,63974:2,67539:1,67917:1,70717:2 8 10 1.250 1.000 4 TCGA:I 14755767 chr17 42837995 43230058 392064 + 0 GT AG 0 0 ,61544:1 1 1 1.000 1.000 4 TCGA:I 14755771 chr17 42838101 43193193 355093 + 0 GT AG 0 0 ,60872:1,61998:1,62690:1,63866:1,64287:1,64340:1,64427:1,65396:1,65602:1,66202:1,66212:1,66478:1,66714:1,66720:1,67114:1,67444:1,67450:1,67572:1,68331:1,68573:2,69250:1,70130:1,70169:1 23 24 1.043 1.000 4 TCGA:I 14755815 chr17 42838198 43336478 498281 - 0 AT AC 0 0 ,60007:1,60349:1,60540:1,61222:1,61270:1,61274:1,61301:3,61575:1,61608:1,61650:1,61764:1,61844:1,62088:1,62286:1,62314:1,62446:1,62487:1,62518:1,62656:1,62780:1,63042:1,63063:1,63131:1,63304:1,63441:1,63530:1,63598:1,63599:1,63854:1,64105:1,64126:1,64245:1,64271:1,64839:1,65186:1,65308:2,65542:1,65590:1,65718:1,65805:1,66603:2,66806:1,66834:1,66912:1,67202:1,67802:1,67875:1,68087:1,68204:1,68397:1,68609:1,68898:1,68940:1,69148:1,69254:1,69321:1,69324:1,69486:1,69545:1,69837:1,69921:1,70294:1,70436:1,70883:1 64 68 1.062 1.000 4 TCGA:I 14755837 chr17 42838336 43240181 401846 - 0 GC AG 0 0 ,64087:1 1 1 1.000 1.000 4 TCGA:I 14755850 chr17 42838648 43047668 209021 + 0 GC AG 0 0 ,68595:1 1 1 1.000 1.000 4 TCGA:I 14755973 chr17 42839381 43189041 349661 + 0 GT AG aC19,cG19,cG38,gC19,gC38,kG19,kG38,mG19,mG38,rG19,rG38,sG19,sG38 aC19,cG19,cG38,gC19,gC38,kG19,kG38,mG19,mG38,rG19,rG38,sG19,sG38 ,59898:1 1 1 1.000 1.000 4 TCGA:I 14755988 chr17 42839932 43072324 232393 + 0 GT AG 0 0 ,67931:1 1 1 1.000 1.000 4 TCGA:I 14755996 chr17 42840154 43121553 281400 + 0 AT AC 0 0 ,65462:1 1 1 1.000 1.000 4 TCGA:I 14755997 chr17 42840154 43226086 385933 + 0 AT AC 0 0 ,60027:1,60775:1,69880:1 3 3 1.000 1.000 4 TCGA:I 14756000 chr17 42840158 43121557 281400 - 0 GC AG 0 0 ,65462:1 1 1 1.000 1.000 4 TCGA:I 14756001 chr17 42840158 43226090 385933 - 0 GC AG 0 0 ,60027:1,60775:1,69880:1 3 3 1.000 1.000 4 TCGA:I 14756003 chr17 42840181 43079097 238917 + 0 GC AG 0 0 ,62271:1 1 1 1.000 1.000 4 TCGA:I 14756009 chr17 42840187 43079103 238917 + 0 GC AG 0 0 ,62271:1 1 1 1.000 1.000 4 TCGA:I 14756022 chr17 42840512 43058072 217561 + 0 GC AG 0 0 ,61811:1 1 1 1.000 1.000 4 TCGA:I 14756031 chr17 42840897 43053732 212836 + 0 GC AG 0 0 ,71073:1 1 1 1.000 1.000 4 TCGA:I 14756032 chr17 42840897 43075854 234958 + 0 GC AG 0 0 ,65558:1 1 1 1.000 1.000 4 TCGA:I 14756033 chr17 42840897 43168400 327504 + 0 GC AG 0 0 ,68412:1 1 1 1.000 1.000 4 TCGA:I 14756034 chr17 42840897 43218423 377527 + 0 GC AG 0 0 ,64032:1 1 1 1.000 1.000 4 TCGA:I 14756036 chr17 42840903 43053738 212836 + 0 GC AG 0 0 ,71073:1 1 1 1.000 1.000 4 TCGA:I 14756037 chr17 42840903 43168406 327504 + 0 GC AG 0 0 ,68412:1 1 1 1.000 1.000 4 TCGA:I 14756038 chr17 42840903 43237356 396454 + 0 GC AG 0 0 ,67094:1 1 1 1.000 1.000 4 TCGA:I 14756158 chr17 42841689 43105534 263846 - 0 GT AG 0 0 ,64704:1 1 1 1.000 1.000 4 TCGA:I 14756209 chr17 42841747 43201621 359875 - 0 GT AG 0 0 ,65429:1 1 1 1.000 1.000 4 TCGA:I 14756219 chr17 42841759 43213384 371626 + 0 GC AG 0 0 ,64541:1 1 1 1.000 1.000 4 TCGA:I 14756226 chr17 42841761 43213386 371626 - 0 GC AG 0 0 ,64541:1 1 1 1.000 1.000 4 TCGA:I 14756239 chr17 42841805 43177567 335763 - 0 GT AG 0 0 ,62504:1,62528:1,62554:1,62634:1,62789:1,62931:1,64622:1,69234:1,69307:1,69397:1,69415:1,69447:1,69483:1,69511:1 14 14 1.000 1.000 4 TCGA:I 14756266 chr17 42841831 43152439 310609 + 0 GT AG 0 0 ,62328:1,63472:2,68225:2 3 5 1.667 2.000 4 TCGA:I 14756267 chr17 42841831 43222731 380901 + 0 GT AG 0 0 ,64398:1 1 1 1.000 1.000 4 TCGA:I 14756268 chr17 42841831 43226312 384482 + 0 GT AG 0 0 ,70037:1 1 1 1.000 1.000 4 TCGA:I 14756287 chr17 42841841 43291087 449247 + 0 GC AG 0 0 ,68768:1 1 1 1.000 1.000 4 TCGA:I 14756301 chr17 42841852 43311947 470096 + 0 GC AG 0 0 ,63738:1,69682:1 2 2 1.000 1.000 4 TCGA:I 14756406 chr17 42841995 43233296 391302 + 0 GC AG 0 0 ,60942:1,61296:1,64703:1,64712:1,65119:1,66139:1,66822:1,67595:1,68814:1,70917:1 10 10 1.000 1.000 4 TCGA:I 14756407 chr17 42841995 43251336 409342 + 0 GC AG 0 0 ,60809:1,64172:1,64382:1,65221:1,66240:1,68849:1 6 6 1.000 1.000 4 TCGA:I 14756456 chr17 42842051 43235971 393921 + 0 GC AG 0 0 ,71015:1 1 1 1.000 1.000 4 TCGA:I 14756501 chr17 42842108 43194469 352362 + 0 AT AC 0 0 ,66058:1,66435:1,67054:1,68479:1,69043:1 5 5 1.000 1.000 4 TCGA:I 14756573 chr17 42842208 43101841 259634 + 0 AT AC 0 0 ,61424:1 1 1 1.000 1.000 4 TCGA:I 14756592 chr17 42842212 43101845 259634 - 0 AT AC 0 0 ,61424:1 1 1 1.000 1.000 4 TCGA:I 14756607 chr17 42842240 43222916 380677 + 0 AT AC 0 0 ,59999:1 1 1 1.000 1.000 4 TCGA:I 14756622 chr17 42842263 43308921 466659 + 0 AT AC 0 0 ,69600:1 1 1 1.000 1.000 4 TCGA:I 14756659 chr17 42842306 43297928 455623 - 0 GT AG 0 0 ,59832:1,60069:1,61100:1,61417:1,61462:1,61513:1,61956:1,62575:1,63021:1,63566:1,63675:1,63799:1,64072:1,64168:1,64182:1,64609:1,65075:1,65263:1,65323:1,65331:1,66287:1,67133:1,67747:1,67803:1,67884:1,68111:1,68765:1,69505:1,69656:1,69847:1,70047:1,70344:1,70706:1,70781:1,71013:2 35 36 1.029 1.000 4 TCGA:I 14757002 chr17 42843006 43082194 239189 + 0 GT AG 0 0 ,67039:1 1 1 1.000 1.000 4 TCGA:I 14757013 chr17 42843090 43201202 358113 - 0 GT AG 0 0 ,62832:1 1 1 1.000 1.000 4 TCGA:I 14757023 chr17 42843147 43211987 368841 - 0 GC AG 0 0 ,69160:1 1 1 1.000 1.000 4 TCGA:I 14757025 chr17 42843150 43079463 236314 - 0 GT AG 0 0 ,64359:1 1 1 1.000 1.000 4 TCGA:I 14757089 chr17 42843410 43133575 290166 - 0 GC AG 0 0 ,65714:2 1 2 2.000 2.000 4 TCGA:I 14757092 chr17 42843429 43054337 210909 + 0 GC AG 0 0 ,61178:1 1 1 1.000 1.000 4 TCGA:I 14757093 chr17 42843430 43143534 300105 - 0 GC AG 0 0 ,59981:1,61188:1,68776:1,69577:1,70326:1,70987:1 6 6 1.000 1.000 4 TCGA:I 14757101 chr17 42843488 43143534 300047 - 0 GC AG 0 0 ,60725:1 1 1 1.000 1.000 4 TCGA:I 14757107 chr17 42843562 43143534 299973 - 0 GC AG 0 0 ,61761:2 1 2 2.000 2.000 4 TCGA:I 14757112 chr17 42843626 43059675 216050 - 0 GT AG 0 0 ,63305:1 1 1 1.000 1.000 4 TCGA:I 14757167 chr17 42844951 43211125 366175 - 0 GT AG 0 0 ,62620:1 1 1 1.000 1.000 4 TCGA:I 14757206 chr17 42845340 43200474 355135 + 0 GC AG 0 0 ,70812:1 1 1 1.000 1.000 4 TCGA:I 14757250 chr17 42847664 43044848 197185 + 0 GC AG 0 0 ,59932:1,59958:1,60253:1,60326:1,60594:1,60683:1,60759:2,61001:1,61177:1,61349:1,61542:1,61641:2,62184:1,62382:1,62518:1,62574:1,62701:1,63124:1,63290:1,63393:1,63447:1,63656:1,63834:1,63905:1,64177:1,64620:1,65041:1,65059:1,65109:1,65143:1,65581:1,65686:1,65814:1,65816:1,65879:1,65880:1,66135:1,67265:1,67344:1,67924:4,68581:1,69071:1,69382:1,69598:1,69723:1,69949:1,70093:1,70267:1,70359:1,70574:1,70636:1,70667:1,70869:1,71034:1 54 59 1.093 1.000 4 TCGA:I 14757254 chr17 42847733 43184165 336433 - 0 GT AG 0 0 ,60483:1 1 1 1.000 1.000 4 TCGA:I 14757258 chr17 42847863 43099352 251490 - 0 GT AG 0 0 ,59787:1,60009:1,60398:1,60661:1,60812:1,60915:1,60918:2,60930:1,61089:1,61253:1,61255:1,61301:1,61394:1,61556:2,61605:1,61678:1,61807:1,61930:1,62168:1,62409:1,62424:1,62480:1,62516:1,62798:1,62838:1,62922:1,62976:1,63153:2,63159:1,63278:1,63338:1,63347:1,63667:1,63944:1,64123:1,64223:1,64335:1,64369:1,64637:1,64767:2,64825:3,64830:1,64870:1,65024:1,65228:1,65272:1,65305:1,65571:1,65574:1,66007:1,66261:1,66517:1,66545:1,66553:1,66586:1,66714:1,66752:1,66802:1,66822:1,66953:2,66954:1,67130:1,67820:1,67886:1,67943:1,67965:1,67990:2,68416:1,68645:1,68680:1,68706:1,68729:1,68856:1,68885:1,69062:1,69162:1,69169:1,69228:1,69484:1,69573:1,69735:1,69736:1,69856:1,70084:1,70340:1,70485:2,70493:1 87 96 1.103 1.000 4 TCGA:I 14757261 chr17 42847869 43099358 251490 - 0 GT AG 0 0 ,59787:1,60009:1,60398:1,60661:1,60812:1,60915:1,60918:2,60930:1,61089:1,61253:1,61255:1,61301:1,61394:1,61556:2,61605:1,61678:1,61807:1,61930:1,62168:1,62409:1,62424:1,62480:1,62516:1,62798:1,62838:1,62922:1,62976:1,63153:2,63159:1,63278:1,63338:1,63347:1,63667:1,63944:1,64123:1,64223:1,64335:1,64369:1,64637:1,64767:2,64825:3,64830:1,64870:1,65024:1,65228:1,65272:1,65305:1,65571:1,65574:1,66007:1,66261:1,66517:1,66545:1,66553:1,66586:1,66714:1,66752:1,66802:1,66822:1,66953:2,66954:1,67130:1,67820:1,67886:1,67943:1,67965:1,67990:2,68416:1,68645:1,68680:1,68706:1,68729:1,68856:1,68885:1,69062:1,69162:1,69169:1,69228:1,69484:1,69573:1,69735:1,69736:1,69856:1,70084:1,70340:1,70485:2,70493:1 87 96 1.103 1.000 4 TCGA:I 14757265 chr17 42847901 43066498 218598 - 0 GC AG 0 0 ,70193:1 1 1 1.000 1.000 4 TCGA:I 14757274 chr17 42848639 43199170 350532 - 0 GT AG 0 0 ,63006:1,63600:1,70320:1 3 3 1.000 1.000 4 TCGA:I 14757279 chr17 42848800 43053124 204325 - 0 GC AG 0 0 ,59862:1,64323:1 2 2 1.000 1.000 4 TCGA:I 14757282 chr17 42848944 43100778 251835 - 0 GC AG 0 0 ,64236:1 1 1 1.000 1.000 4 TCGA:I 14757327 chr17 42849474 43193114 343641 - 0 GT AG 0 0 ,60058:1,60134:1,60630:1,61217:1,61294:1,61350:1,61761:1,62812:1,64914:1,64999:1,65270:1,66648:1,68641:1,68931:1,68996:1,69031:1,69277:1,69984:1,70173:1 19 19 1.000 1.000 4 TCGA:I 14757328 chr17 42849490 43213114 363625 + 0 GT AG 0 aC19,gC19,gC38,kG38,sG19,sG38 ,60827:1 1 1 1.000 1.000 4 TCGA:I 14757343 chr17 42850118 43249775 399658 + 0 AT AC 0 0 ,60003:1 1 1 1.000 1.000 4 TCGA:I 14757346 chr17 42850154 43208939 358786 - 0 GC AG 0 0 ,65605:1 1 1 1.000 1.000 4 TCGA:I 14757365 chr17 42850672 43334508 483837 - 0 AT AC 0 0 ,64692:1 1 1 1.000 1.000 4 TCGA:I 14757376 chr17 42851087 43053425 202339 + 0 GC AG 0 0 ,61678:1 1 1 1.000 1.000 4 TCGA:I 14757431 chr17 42851419 43115783 264365 + 0 GT AG 0 0 ,64360:1 1 1 1.000 1.000 4 TCGA:I 14757435 chr17 42851455 43200511 349057 - 0 GT AG 0 0 ,63186:1,67095:1,70391:1 3 3 1.000 1.000 4 TCGA:I 14758444 chr17 42854678 43151150 296473 + 0 GC AG 0 0 ,60374:1 1 1 1.000 1.000 4 TCGA:I 14758499 chr17 42854734 43214019 359286 + 0 GT AG aC19,cG19,cG38,gC19,gC38,kG19,kG38,mG19,mG38,rG19,rG38,sG19,sG38 0 ,68939:1 1 1 1.000 1.000 4 TCGA:I 14759050 chr17 42856665 43140587 283923 - 0 GT AG 0 0 ,66827:1 1 1 1.000 1.000 4 TCGA:I 14759199 chr17 42856805 43244290 387486 - 0 GC AG 0 0 ,67560:1 1 1 1.000 1.000 4 TCGA:I 14759325 chr17 42857028 43224787 367760 - 0 GT AG 0 0 ,61582:1 1 1 1.000 1.000 4 TCGA:I 14759333 chr17 42857035 43133563 276529 - 0 GC AG 0 0 ,64359:1 1 1 1.000 1.000 4 TCGA:I 14759637 chr17 42857684 43194966 337283 - 0 GT AG 0 0 ,70201:1 1 1 1.000 1.000 4 TCGA:I 14759651 chr17 42857797 43238504 380708 - 0 GC AG 0 0 ,64352:2,65474:1,70384:1 3 4 1.333 1.000 4 TCGA:I 14759664 chr17 42857854 43122499 264646 + 0 GT AG 0 0 ,64392:1 1 1 1.000 1.000 4 TCGA:I 14759669 chr17 42857868 43333191 475324 + 0 GT AG 0 0 ,60097:1 1 1 1.000 1.000 4 TCGA:I 14759671 chr17 42857877 43333200 475324 + 0 GC AG 0 0 ,60097:1 1 1 1.000 1.000 4 TCGA:I 14759691 chr17 42858014 43095256 237243 + 0 GT AG 0 0 ,70887:1 1 1 1.000 1.000 4 TCGA:I 14759694 chr17 42858194 43323333 465140 + 0 GT AG 0 0 ,61381:1 1 1 1.000 1.000 4 TCGA:I 14759702 chr17 42858569 43197070 338502 + 0 GC AG 0 0 ,66824:1 1 1 1.000 1.000 4 TCGA:I 14759708 chr17 42859864 43146299 286436 + 0 AT AC 0 0 ,66317:1 1 1 1.000 1.000 4 TCGA:I 14759723 chr17 42860710 43144783 284074 + 0 GC AG 0 0 ,68481:1 1 1 1.000 1.000 4 TCGA:I 14759725 chr17 42860716 43144789 284074 + 0 GC AG 0 0 ,68481:1 1 1 1.000 1.000 4 TCGA:I 14759726 chr17 42860720 43144793 284074 + 0 GT AG 0 0 ,68481:1 1 1 1.000 1.000 4 TCGA:I 14759741 chr17 42862745 43217802 355058 - 0 GT AG 0 0 ,66445:1,67951:1 2 2 1.000 1.000 4 TCGA:I 14759752 chr17 42863640 43114390 250751 - 0 GT AG 0 0 ,62356:1,62776:1 2 2 1.000 1.000 4 TCGA:I 14759757 chr17 42864280 43231560 367281 + 0 GC AG 0 0 ,67190:1 1 1 1.000 1.000 4 TCGA:I 14759767 chr17 42865146 43053738 188593 + 0 GC AG 0 0 ,59792:1,59868:2,59896:1,59926:2,59941:1,60014:1,60027:1,60054:1,60109:1,60128:1,60129:2,60137:1,60147:1,60187:1,60190:1,60401:1,60433:2,60455:1,60459:1,60466:1,60489:1,60515:1,60519:1,60564:1,60576:1,60585:1,60590:1,60613:1,60624:1,60678:1,60763:1,60769:1,60846:4,60848:3,60856:1,60881:1,60883:1,61011:1,61012:1,61112:1,61164:1,61186:1,61328:1,61420:1,61425:2,61429:1,61455:1,61564:2,61576:1,61615:1,61646:1,61651:1,61697:1,61749:2,61792:1,61797:2,61806:1,61831:1,61837:1,61874:1,61878:1,61960:1,62001:1,62006:1,62026:1,62263:1,62288:1,62293:1,62296:2,62337:1,62346:1,62370:1,62467:1,62512:1,62544:1,62573:1,62659:1,62661:4,62688:1,62795:1,62823:1,62854:1,62859:1,62883:1,62929:1,62933:2,63311:1,63367:1,63376:1,63442:1,63450:1,63469:1,63470:2,63475:1,63516:1,63532:1,63620:2,63623:1,63635:1,63664:2,63773:1,63800:1,63818:1,63859:1,63869:1,63870:1,63878:1,63902:1,64014:1,64037:1,64044:1,64113:2,64235:1,64243:1,64287:1,64297:1,64306:1,64399:1,64432:2,64463:2,64501:1,64574:1,64590:1,64668:1,64697:1,64738:1,64758:1,64764:1,64853:1,64857:1,64947:1,64980:1,65016:1,65027:1,65149:1,65226:1,65245:1,65268:1,65344:1,65491:1,65539:2,65553:1,65571:1,65594:1,65632:1,65633:1,65672:1,65709:1,65754:1,65779:1,65816:2,65964:1,66027:1,66105:1,66129:1,66156:1,66157:1,66168:1,66213:1,66242:1,66272:1,66306:1,66344:1,66346:1,66359:1,66365:1,66370:1,66410:1,66432:1,66448:1,66497:1,66522:2,66531:1,66575:1,66592:1,66641:1,66729:1,66736:1,66741:1,66840:1,66846:1,66866:1,66883:1,67113:1,67153:1,67192:2,67239:1,67261:1,67303:1,67304:1,67324:1,67333:1,67448:1,67555:1,67585:1,67612:1,67627:1,67733:1,67796:1,67805:1,67822:1,67914:1,67943:3,67960:1,68005:1,68037:1,68089:1,68193:1,68206:1,68237:1,68253:1,68286:1,68308:1,68405:1,68507:1,68579:1,68673:1,68714:1,68719:2,68798:5,68835:1,68853:1,68910:1,68923:1,69002:1,69058:1,69074:1,69210:1,69229:1,69233:1,69295:1,69306:1,69364:1,69367:1,69382:1,69389:1,69436:1,69456:1,69483:1,69489:1,69493:1,69544:1,69551:1,69553:1,69555:1,69589:1,69605:1,69665:1,69670:1,69671:1,69750:1,69766:1,69786:1,69804:1,69843:1,69889:1,69929:3,69968:1,69994:1,70041:1,70148:1,70201:1,70203:1,70225:1,70251:1,70261:1,70276:1,70313:2,70628:2,70629:1,70655:1,70799:1,70839:1,70846:1,70860:1,70868:1,70886:1,70892:1,70910:1,71004:1,71035:1,71073:1 282 321 1.138 1.000 4 TCGA:I 14759771 chr17 42865426 43120639 255214 - 0 GC AG 0 0 ,68877:1 1 1 1.000 1.000 4 TCGA:I 14759772 chr17 42865426 43177147 311722 - 0 GT AG 0 0 ,61455:4 1 4 4.000 4.000 4 TCGA:I 14759773 chr17 42865455 43074824 209370 + 0 GC AG 0 0 ,63112:1 1 1 1.000 1.000 4 TCGA:I 14759774 chr17 42865474 43074843 209370 - 0 GT AG 0 0 ,62784:1 1 1 1.000 1.000 4 TCGA:I 14759781 chr17 42866107 43082437 216331 + 0 GT AG 0 0 ,63212:2 1 2 2.000 2.000 4 TCGA:I 14759811 chr17 42867102 43093091 225990 + 0 GC AG 0 0 ,66310:2,70074:2 2 4 2.000 2.000 4 TCGA:I 14759814 chr17 42867325 43190835 323511 + 0 GC AG 0 0 ,68909:1 1 1 1.000 1.000 4 TCGA:I 14759815 chr17 42867325 43194850 327526 + 0 GC AG 0 0 ,66866:1 1 1 1.000 1.000 4 TCGA:I 14759819 chr17 42867699 43349886 482188 + 0 GT AG 0 0 ,61091:1,61582:1,63707:1,69840:1 4 4 1.000 1.000 4 TCGA:I 14759821 chr17 42868065 43324563 456499 + 0 GT AG 0 0 ,62167:1,62845:2,67472:1 3 4 1.333 1.000 4 TCGA:I 14759824 chr17 42868128 43226155 358028 - 0 GC AG 0 gC38,kG38 ,65287:1 1 1 1.000 1.000 4 TCGA:I 14759863 chr17 42869023 43218447 349425 + 0 GT AG 0 0 ,64714:1 1 1 1.000 1.000 4 TCGA:I 14759865 chr17 42869135 43170059 300925 + 0 GC AG 0 0 ,61288:1 1 1 1.000 1.000 4 TCGA:I 14759869 chr17 42869644 43207471 337828 - 0 GT AG 0 0 ,60525:1 1 1 1.000 1.000 4 TCGA:I 14759878 chr17 42870999 43200517 329519 - 0 GC AG 0 0 ,65867:1 1 1 1.000 1.000 4 TCGA:I 14759881 chr17 42871292 43168611 297320 - 0 GC AG 0 0 ,61242:1,67492:1 2 2 1.000 1.000 4 TCGA:I 14759906 chr17 42872732 43073434 200703 - 0 AT AC 0 0 ,68853:1,69611:2 2 3 1.500 1.500 4 TCGA:I 14759918 chr17 42873248 43233390 360143 + 0 GC AG 0 0 ,59783:1,59847:1,59858:1,59920:1,59980:1,59995:1,60125:1,60148:1,60429:1,60431:1,60552:1,60705:1,60758:1,60770:1,60781:2,60811:1,60916:1,60950:1,60970:1,61019:1,61041:1,61180:3,61240:1,61293:1,61315:1,61378:1,61393:1,61548:2,61597:2,61755:1,61839:1,61973:1,62134:1,62136:1,62178:2,62193:1,62213:1,62449:1,62525:1,62548:1,62549:1,62629:1,62888:1,62906:1,62972:1,63273:1,63361:1,63424:1,63429:1,63504:1,63580:1,64061:1,64278:1,64297:1,64357:1,64458:2,64460:3,64618:1,64742:1,64758:1,64765:1,64816:2,64843:1,64988:1,65015:1,65021:1,65274:1,65336:2,65339:1,65349:1,65384:1,65560:1,65592:1,65729:1,65793:2,65796:1,65811:1,66086:1,66104:1,66212:1,66360:2,66391:1,66418:1,66511:1,66520:1,66614:2,66646:2,66661:1,66771:1,66838:1,66946:7,67018:2,67019:1,67031:1,67060:2,67091:1,67150:1,67251:1,67346:1,67517:1,67526:1,67591:1,67596:1,67666:1,68114:1,68294:1,68330:1,68345:1,68425:1,68453:1,68499:1,68578:2,68647:1,68661:1,68853:1,68885:1,69002:1,69021:1,69127:1,69295:1,69332:1,69348:2,69659:1,69669:1,69747:1,69827:1,69919:1,69990:1,70048:1,70054:1,70127:1,70184:1,70198:1,70226:1,70250:1,70262:4,70282:2,70301:1,70403:1,70536:1,70740:1,70766:1 142 171 1.204 1.000 4 TCGA:I 14759919 chr17 42873248 43239558 366311 + 0 GC AG 0 0 ,61360:1 1 1 1.000 1.000 4 TCGA:I 14759932 chr17 42873795 43089733 215939 + 0 GT AG 0 0 ,60924:1 1 1 1.000 1.000 4 TCGA:I 14759940 chr17 42874023 43153417 279395 + 0 GT AG 0 0 ,66804:1 1 1 1.000 1.000 4 TCGA:I 14759943 chr17 42874045 43210914 336870 + 0 GT AG 0 0 ,70370:1 1 1 1.000 1.000 4 TCGA:I 14759944 chr17 42874148 43200170 326023 + 0 AT AC 0 0 ,70853:1 1 1 1.000 1.000 4 TCGA:I 14759945 chr17 42874164 43232688 358525 - 0 GT AG 0 0 ,65893:1 1 1 1.000 1.000 4 TCGA:I 14759960 chr17 42874301 43212242 337942 - 0 GC AG 0 0 ,68283:1 1 1 1.000 1.000 4 TCGA:I 14759963 chr17 42874310 43211762 337453 + 0 GC AG 0 0 ,69426:1 1 1 1.000 1.000 4 TCGA:I 14759964 chr17 42874318 43211770 337453 - 0 GC AG 0 0 ,69426:1 1 1 1.000 1.000 4 TCGA:I 14760001 chr17 42875169 43102451 227283 + 0 GT AG 0 0 ,60476:1 1 1 1.000 1.000 4 TCGA:I 14760022 chr17 42876022 43108084 232063 - 0 GT AG 0 0 ,60887:1,61590:1 2 2 1.000 1.000 4 TCGA:I 14760029 chr17 42876089 43153007 276919 - 0 GC AG 0 0 ,69798:1 1 1 1.000 1.000 4 TCGA:I 14760030 chr17 42876089 43375704 499616 - 0 GT AG 0 0 ,67926:1 1 1 1.000 1.000 4 TCGA:I 14760031 chr17 42876156 43185575 309420 - 0 GC AG 0 0 ,60979:1,61432:1,62483:1,67338:1 4 4 1.000 1.000 4 TCGA:I 14760034 chr17 42876179 43117636 241458 + 0 GC AG 0 0 ,59926:1 1 1 1.000 1.000 4 TCGA:I 14760035 chr17 42876185 43117642 241458 + 0 GC AG 0 0 ,59926:1 1 1 1.000 1.000 4 TCGA:I 14760036 chr17 42876499 43227073 350575 + 0 GT AG 0 0 ,68091:1,68651:1 2 2 1.000 1.000 4 TCGA:I 14760037 chr17 42876505 43227079 350575 + 0 GC AG 0 0 ,68091:1,68651:1 2 2 1.000 1.000 4 TCGA:I 14760043 chr17 42876563 43237311 360749 - 0 GC AG 0 0 ,59761:1,59817:1,59960:2,60148:1,60303:1,60447:1,60934:1,61039:1,61227:2,61562:1,61834:1,61839:1,62496:1,62548:2,62619:1,62945:1,63007:1,63241:1,63258:1,63464:1,63715:1,63958:1,64032:1,64056:1,64132:2,64959:3,65982:1,66214:1,66534:1,66671:2,66692:1,66753:1,66976:1,67243:1,67320:1,67784:1,67787:1,67832:2,68040:2,68368:1,68731:1,69483:2,69490:1,69653:1,70025:1,70517:1,70519:1,70846:1 48 58 1.208 1.000 4 TCGA:I 14760052 chr17 42876998 43044891 167894 - 0 GT AG 0 0 ,60219:1 1 1 1.000 1.000 4 TCGA:I 14760053 chr17 42876998 43139444 262447 - 0 GC AG 0 0 ,60334:1,60960:3,61419:1,61809:1,61832:1,62781:1,62910:1,65599:1,69442:1,70485:1,70725:1,70964:1,71109:1 13 15 1.154 1.000 4 TCGA:I 14760070 chr17 42877424 43314778 437355 - 0 GC AG 0 0 ,65883:1 1 1 1.000 1.000 4 TCGA:I 14760093 chr17 42878074 43125276 247203 - 0 GT AG aC19,gC19,gC38,kG19,kG38,rG19,rG38,sG19,sG38,vG19 aC19,gC19,gC38,kG19,kG38,rG19,rG38,sG38,vG19 ,62044:1 1 1 1.000 1.000 4 TCGA:I 14760094 chr17 42878118 43121557 243440 - 0 GC AG 0 0 ,59810:1,64256:1 2 2 1.000 1.000 4 TCGA:I 14760095 chr17 42878118 43308638 430521 - 0 GC AG 0 0 ,63454:1,66279:1,69084:1,70102:1 4 4 1.000 1.000 4 TCGA:I 14760098 chr17 42878166 43202102 323937 - 0 GT AG 0 0 ,65462:1 1 1 1.000 1.000 4 TCGA:I 14760101 chr17 42878173 43202109 323937 + 0 GC AG 0 0 ,65462:1 1 1 1.000 1.000 4 TCGA:I 14760104 chr17 42878179 43202115 323937 + 0 GT AG 0 0 ,65462:1 1 1 1.000 1.000 4 TCGA:I 14760155 chr17 42878960 43233750 354791 - 0 GT AG 0 0 ,67415:1 1 1 1.000 1.000 4 TCGA:I 14760158 chr17 42879077 43350335 471259 + 0 GC AG 0 0 ,63863:1 1 1 1.000 1.000 4 TCGA:I 14760159 chr17 42879077 43352871 473795 + 0 GC AG 0 0 ,67040:1 1 1 1.000 1.000 4 TCGA:I 14760160 chr17 42879115 43185634 306520 + 0 GC AG 0 0 ,61722:1 1 1 1.000 1.000 4 TCGA:I 14760173 chr17 42879632 43197075 317444 + 0 AT AC 0 0 ,61505:1 1 1 1.000 1.000 4 TCGA:I 14760225 chr17 42880510 43060865 180356 - 0 GT AG 0 0 ,62117:1 1 1 1.000 1.000 4 TCGA:I 14760231 chr17 42880868 43315958 435091 - 0 AT AC 0 0 ,69121:1 1 1 1.000 1.000 4 TCGA:I 14760237 chr17 42881350 43193463 312114 - 0 GC AG 0 0 ,70084:1 1 1 1.000 1.000 4 TCGA:I 14760238 chr17 42881357 43193470 312114 + 0 GC AG 0 0 ,70084:1 1 1 1.000 1.000 4 TCGA:I 14760250 chr17 42882163 43157912 275750 - 0 GT AG 0 0 ,65348:1 1 1 1.000 1.000 4 TCGA:I 14760252 chr17 42882357 43367394 485038 + 0 GC AG 0 0 ,67710:1 1 1 1.000 1.000 4 TCGA:I 14760253 chr17 42882363 43053738 171376 + 0 GC AG 0 0 ,71001:1 1 1 1.000 1.000 4 TCGA:I 14760265 chr17 42882535 43141406 258872 + 0 GC AG 0 0 ,67268:1 1 1 1.000 1.000 4 TCGA:I 14760267 chr17 42882572 43200181 317610 - 0 GC AG 0 0 ,63456:1 1 1 1.000 1.000 4 TCGA:I 14760270 chr17 42882710 43210904 328195 - 0 AT AC 0 0 ,62833:1 1 1 1.000 1.000 4 TCGA:I 14760272 chr17 42882983 43367371 484389 - 0 GC AG 0 0 ,60259:1,61359:1 2 2 1.000 1.000 4 TCGA:I 14760278 chr17 42883763 43166299 282537 - 0 GC AG 0 0 ,62411:1 1 1 1.000 1.000 4 TCGA:I 14760288 chr17 42884352 43131207 246856 + 0 GT AG 0 aC19,gC19,gC38,kG19,rG19,rG38,sG19,sG38,vG19 ,60914:1 1 1 1.000 1.000 4 TCGA:I 14760300 chr17 42884740 43195695 310956 - 0 GT AG 0 0 ,61722:1 1 1 1.000 1.000 4 TCGA:I 14760304 chr17 42885272 43175869 290598 + 0 GC AG 0 0 ,60091:1,63284:1,64710:1 3 3 1.000 1.000 4 TCGA:I 14760305 chr17 42885272 43342389 457118 + 0 GC AG 0 0 ,65525:1 1 1 1.000 1.000 4 TCGA:I 14760313 chr17 42885689 43183422 297734 - 0 AT AC 0 0 ,67791:1 1 1 1.000 1.000 4 TCGA:I 14760314 chr17 42885698 43182432 296735 + 0 GC AG 0 0 ,60645:1 1 1 1.000 1.000 4 TCGA:I 14760315 chr17 42885723 43376515 490793 + 0 GT AG 0 0 ,60848:1,60894:2,61773:1,62044:1,64007:1,67367:1,67887:1,68974:1,69096:1,70697:1,71015:2 11 13 1.182 1.000 4 TCGA:I 14760318 chr17 42885736 43376528 490793 - 0 GC AG 0 0 ,60010:1,62509:1,62977:1,66231:1,68224:1,70111:1 6 6 1.000 1.000 4 TCGA:I 14760326 chr17 42886055 43364816 478762 - 0 GC AG 0 0 ,60498:1,61801:1 2 2 1.000 1.000 4 TCGA:I 14760327 chr17 42886055 43382332 496278 - 0 GC AG 0 0 ,60645:1,60861:1,62619:3,63309:1,65272:1 5 7 1.400 1.000 4 TCGA:I 14760329 chr17 42886152 43047144 160993 + 0 GC AG 0 0 ,68355:1 1 1 1.000 1.000 4 TCGA:I 14760336 chr17 42887802 43178768 290967 - 0 GC AG 0 0 ,69241:1 1 1 1.000 1.000 4 TCGA:I 14760338 chr17 42887914 43132877 244964 - 0 GC AG 0 0 ,60091:1 1 1 1.000 1.000 4 TCGA:I 14760339 chr17 42887920 43132883 244964 - 0 GC AG 0 0 ,60091:1 1 1 1.000 1.000 4 TCGA:I 14760351 chr17 42888957 43313976 425020 - 0 GT AG 0 0 ,68822:1 1 1 1.000 1.000 4 TCGA:I 14760353 chr17 42889012 43139499 250488 + 0 GT AG 0 0 ,60406:1,66275:1 2 2 1.000 1.000 4 TCGA:I 14760354 chr17 42889207 43318572 429366 + 0 GC AG 0 0 ,68315:1 1 1 1.000 1.000 4 TCGA:I 14760355 chr17 42889211 43148552 259342 - 0 AT AC 0 0 ,62678:1,65638:1 2 2 1.000 1.000 4 TCGA:I 14760358 chr17 42889692 43370121 480430 - 0 AT AC 0 0 ,65538:1 1 1 1.000 1.000 4 TCGA:I 14760377 chr17 42891003 43113080 222078 + 0 GC AG 0 0 ,60081:1,61124:1,61576:1,62121:1,62385:1,62755:1,63084:1,63196:1,63477:1,64194:1,68176:1,70593:1 12 12 1.000 1.000 4 TCGA:I 14760378 chr17 42891019 43226686 335668 - 0 GT AG 0 0 ,67272:1 1 1 1.000 1.000 4 TCGA:I 14760381 chr17 42891140 43083269 192130 - 0 GT AG 0 0 ,62062:1,62854:1,67423:1 3 3 1.000 1.000 4 TCGA:I 14760382 chr17 42891146 43083275 192130 - 0 GC AG 0 0 ,62062:1,62854:1,67423:1 3 3 1.000 1.000 4 TCGA:I 14760383 chr17 42891206 43145751 254546 + 0 GT AG 0 0 ,69403:1 1 1 1.000 1.000 4 TCGA:I 14760385 chr17 42891754 43067755 176002 - 0 GT AG 0 0 ,65810:1,67981:1 2 2 1.000 1.000 4 TCGA:I 14760390 chr17 42892439 43388097 495659 + 0 GC AG 0 0 ,59909:1,60676:1,60894:1,62426:1,62512:1,62923:1,63594:1,63892:2,64273:1,64519:1,64971:1,65352:1,66073:1,66201:4,66451:1,66673:1,67016:1,68805:1,69361:1,70285:1,70310:1,70560:1 22 26 1.182 1.000 4 TCGA:I 14760394 chr17 42892749 43370800 478052 + 0 GT AG 0 0 ,65515:2 1 2 2.000 2.000 4 TCGA:I 14760395 chr17 42892783 43072286 179504 + 0 GC AG 0 0 ,70112:1 1 1 1.000 1.000 4 TCGA:I 14760396 chr17 42892783 43108235 215453 + 0 GC AG 0 0 ,65402:1 1 1 1.000 1.000 4 TCGA:I 14760397 chr17 42892821 43108928 216108 + 0 GT AG 0 0 ,66995:1,67021:1 2 2 1.000 1.000 4 TCGA:I 14760399 chr17 42893066 43210914 317849 + 0 GT AG 0 0 ,66354:1 1 1 1.000 1.000 4 TCGA:I 14760407 chr17 42893550 43166697 273148 - 0 GC AG 0 0 ,66367:1 1 1 1.000 1.000 4 TCGA:I 14760415 chr17 42893941 43369502 475562 - 0 GC AG 0 0 ,66056:1,69071:1 2 2 1.000 1.000 4 TCGA:I 14760422 chr17 42894477 43196539 302063 - 0 GC AG 0 0 ,70807:1 1 1 1.000 1.000 4 TCGA:I 14760444 chr17 42895307 43044323 149017 - 0 GC AG 0 0 ,65530:1 1 1 1.000 1.000 4 TCGA:I 14760462 chr17 42895810 43083298 187489 + 0 GT AG 0 0 ,63398:1 1 1 1.000 1.000 4 TCGA:I 14760463 chr17 42895860 43183853 287994 - 0 GC AG 0 0 ,70846:1 1 1 1.000 1.000 4 TCGA:I 14760465 chr17 42895920 43357588 461669 - 0 GT AG 0 0 ,63282:1 1 1 1.000 1.000 4 TCGA:I 14760466 chr17 42895920 43385940 490021 - 0 GT AG 0 0 ,60665:1 1 1 1.000 1.000 4 TCGA:I 14760467 chr17 42895946 43057075 161130 - 0 GC AG 0 0 ,67361:1 1 1 1.000 1.000 4 TCGA:I 14760469 chr17 42895952 43310171 414220 - 0 GC AG 0 0 ,69567:1 1 1 1.000 1.000 4 TCGA:I 14760471 chr17 42896068 43150024 253957 + 0 GT AG 0 0 ,59831:1 1 1 1.000 1.000 4 TCGA:I 14760472 chr17 42896081 43150037 253957 - 0 GT AG 0 0 ,59831:1 1 1 1.000 1.000 4 TCGA:I 14760477 chr17 42896522 43120639 224118 - 0 GC AG 0 0 ,61432:1,64649:1,67338:1,70197:1 4 4 1.000 1.000 4 TCGA:I 14760482 chr17 42896858 43233750 336893 - 0 GT AG 0 0 ,66558:1 1 1 1.000 1.000 4 TCGA:I 14760484 chr17 42897412 43047310 149899 + 0 GC AG 0 0 ,64710:1 1 1 1.000 1.000 4 TCGA:I 14760486 chr17 42897687 43198701 301015 - 0 GT AG 0 0 ,61559:1 1 1 1.000 1.000 4 TCGA:I 14760491 chr17 42898071 43170146 272076 - 0 GT AG 0 0 ,67857:1,69293:1 2 2 1.000 1.000 4 TCGA:I 14760493 chr17 42898467 43200579 302113 + 0 GT AG 0 0 ,63784:1 1 1 1.000 1.000 4 TCGA:I 14760497 chr17 42898582 43221073 322492 - 0 GC AG 0 0 ,61775:1 1 1 1.000 1.000 4 TCGA:I 14760498 chr17 42898703 43148393 249691 - 0 GT AG 0 0 ,59990:1 1 1 1.000 1.000 4 TCGA:I 14760502 chr17 42898917 43201186 302270 + 0 AT AC 0 0 ,70799:1 1 1 1.000 1.000 4 TCGA:I 14760508 chr17 42899661 43198527 298867 - 0 GC AG 0 0 ,70461:1 1 1 1.000 1.000 4 TCGA:I 14760512 chr17 42900312 43182469 282158 - 0 GC AG 0 0 ,63175:1,66796:1 2 2 1.000 1.000 4 TCGA:I 14760513 chr17 42900547 43200504 299958 - 0 GT AG 0 0 ,63161:1,68858:1 2 2 1.000 1.000 4 TCGA:I 14760514 chr17 42900821 43214634 313814 - 0 GC AG 0 0 ,65390:1 1 1 1.000 1.000 4 TCGA:I 14760548 chr17 42901145 43400184 499040 + 0 GC AG 0 0 ,63224:1,63803:1,64524:1,68400:1,70107:1 5 5 1.000 1.000 4 TCGA:I 14760556 chr17 42901413 43211254 309842 + 0 GT AG 0 0 ,61316:1 1 1 1.000 1.000 4 TCGA:I 14760557 chr17 42901418 43211259 309842 + 0 AT AC 0 0 ,61316:1 1 1 1.000 1.000 4 TCGA:I 14760560 chr17 42901587 43089867 188281 + 0 GT AG 0 0 ,67903:1 1 1 1.000 1.000 4 TCGA:I 14760563 chr17 42901632 43375828 474197 + 0 GC AG 0 0 ,69490:1 1 1 1.000 1.000 4 TCGA:I 14760568 chr17 42902092 43138671 236580 + 0 GT AG 0 0 ,64862:1 1 1 1.000 1.000 4 TCGA:I 14760569 chr17 42902362 43067368 165007 - 0 GC AG 0 0 ,65027:1 1 1 1.000 1.000 4 TCGA:I 14760572 chr17 42902368 43067374 165007 - 0 GC AG 0 0 ,65027:1 1 1 1.000 1.000 4 TCGA:I 14760578 chr17 42903196 43044917 141722 - 0 GC AG 0 0 ,60472:1 1 1 1.000 1.000 4 TCGA:I 14760579 chr17 42903202 43044923 141722 - 0 GC AG 0 0 ,60472:1 1 1 1.000 1.000 4 TCGA:I 14760580 chr17 42903378 43399700 496323 - 0 GC AG 0 0 ,62798:1 1 1 1.000 1.000 4 TCGA:I 14760581 chr17 42903382 43173124 269743 - 0 GC AG 0 0 ,60753:1 1 1 1.000 1.000 4 TCGA:I 14760583 chr17 42903530 43322612 419083 + 0 AT AC 0 0 ,60848:1 1 1 1.000 1.000 4 TCGA:I 14760586 chr17 42903683 43322731 419049 + 0 GT AG 0 0 ,61647:1,63680:1,63885:1,63905:2,65524:1,67405:2,68724:1,70012:1,70420:1 9 11 1.222 1.000 4 TCGA:I 14760621 chr17 42904697 43177353 272657 - 0 GT AG 0 0 ,70584:1 1 1 1.000 1.000 4 TCGA:I 14760623 chr17 42904973 43089867 184895 + 0 GT AG 0 0 ,61266:2 1 2 2.000 2.000 4 TCGA:I 14760624 chr17 42904987 43050487 145501 - 0 GC AG 0 0 ,68345:1 1 1 1.000 1.000 4 TCGA:I 14760625 chr17 42904987 43071882 166896 - 0 GC AG 0 0 ,62430:1,62732:1,68259:2 3 4 1.333 1.000 4 TCGA:I 14760631 chr17 42905329 43374740 469412 + 0 GC AG 0 0 ,65976:1 1 1 1.000 1.000 4 TCGA:I 14760636 chr17 42905432 43214975 309544 + 0 AT AC 0 0 ,65754:1 1 1 1.000 1.000 4 TCGA:I 14760639 chr17 42905762 43053694 147933 + 0 GC AG 0 0 ,61660:1 1 1 1.000 1.000 4 TCGA:I 14760657 chr17 42907254 43152185 244932 - 0 GC AG 0 0 ,70889:1 1 1 1.000 1.000 4 TCGA:I 14760662 chr17 42907556 43214263 306708 + 0 GT AG 0 0 ,62994:1,63940:2,63972:1,64891:1,65368:2,66929:1,67534:1,67541:1,67625:2,67746:1,69212:3,69304:2,70831:1,71016:2 14 21 1.500 1.000 4 TCGA:I 14760677 chr17 42908248 43070143 161896 + 0 GC AG 0 0 ,62806:1 1 1 1.000 1.000 4 TCGA:I 14760678 chr17 42908273 43200176 291904 - 0 GC AG 0 0 ,65351:1 1 1 1.000 1.000 4 TCGA:I 14760679 chr17 42908278 43200181 291904 - 0 GC AG 0 0 ,65351:1 1 1 1.000 1.000 4 TCGA:I 14760683 chr17 42908307 43191997 283691 + 0 GC AG 0 0 ,60286:1 1 1 1.000 1.000 4 TCGA:I 14760686 chr17 42908641 43394844 486204 + 0 GT AG 0 0 ,65632:1,67010:1 2 2 1.000 1.000 4 TCGA:I 14760687 chr17 42908654 43394857 486204 - 0 GC AG 0 0 ,65632:1,67010:1 2 2 1.000 1.000 4 TCGA:I 14760688 chr17 42908660 43394863 486204 - 0 GC AG 0 0 ,65632:1,67010:1 2 2 1.000 1.000 4 TCGA:I 14760690 chr17 42908847 43226670 317824 + 0 GC AG 0 0 ,63943:1 1 1 1.000 1.000 4 TCGA:I 14760693 chr17 42909124 43207639 298516 - 0 GT AG 0 0 ,61627:1 1 1 1.000 1.000 4 TCGA:I 14760714 chr17 42909419 43125192 215774 + 0 GT AG aC19,cG19,cG38,gC19,gC38,kG19,kG38,mG19,mG38,rG19,rG38,sG19,sG38 0 ,66447:1 1 1 1.000 1.000 4 TCGA:I 14760764 chr17 42910968 43189075 278108 - 0 GC AG 0 0 ,64112:1,65367:1,67208:1 3 3 1.000 1.000 4 TCGA:I 14760766 chr17 42910991 43337291 426301 - 0 GT AG 0 0 ,68191:1 1 1 1.000 1.000 4 TCGA:I 14760773 chr17 42911081 43202663 291583 + 0 GT AG 0 0 ,64457:1 1 1 1.000 1.000 4 TCGA:I 14760774 chr17 42911081 43231402 320322 + 0 GT AG 0 0 ,61446:1 1 1 1.000 1.000 4 TCGA:I 14760779 chr17 42911163 43389279 478117 - 0 GC AG 0 0 ,63940:1 1 1 1.000 1.000 4 TCGA:I 14760793 chr17 42911394 43399446 488053 + 0 GT AG 0 0 ,61255:1,68942:2 2 3 1.500 1.500 4 TCGA:I 14760794 chr17 42911401 43399399 487999 + 0 GC AG 0 0 ,67145:1 1 1 1.000 1.000 4 TCGA:I 14760797 chr17 42911437 43399438 488002 + 0 GT AG 0 0 ,69286:1 1 1 1.000 1.000 4 TCGA:I 14760808 chr17 42911684 43211604 299921 + 0 GT AG 0 0 ,59860:1 1 1 1.000 1.000 4 TCGA:I 14760809 chr17 42911690 43233750 322061 - 0 GT AG 0 0 ,66115:1 1 1 1.000 1.000 4 TCGA:I 14760837 chr17 42912016 43340512 428497 - 0 GC AG 0 0 ,67541:1 1 1 1.000 1.000 4 TCGA:I 14760884 chr17 42912638 43178768 266131 - 0 GC AG 0 0 ,59870:1,63330:1,63940:1,63972:1,65140:1,67083:1,67359:1,67534:1,68191:1 9 9 1.000 1.000 4 TCGA:I 14760895 chr17 42912753 43184194 271442 + 0 GT AG 0 0 ,63940:1 1 1 1.000 1.000 4 TCGA:I 14760900 chr17 42912792 43388902 476111 - 0 GC AG 0 0 ,62453:1 1 1 1.000 1.000 4 TCGA:I 14760904 chr17 42912841 43107425 194585 + 0 GC AG 0 0 ,60319:1 1 1 1.000 1.000 4 TCGA:I 14760905 chr17 42912841 43130359 217519 + 0 GC AG 0 0 ,59786:1,59857:1,60085:1,60193:1,60306:1,60617:1,60950:1,60989:1,61044:1,61067:1,61288:1,61446:1,61660:1,61665:2,61855:2,61861:1,61936:1,62109:1,62198:1,62273:1,62278:3,62311:2,62503:1,62568:2,62724:2,62994:2,63250:1,63497:1,63507:1,63554:2,63852:1,63940:5,63999:1,64040:1,64146:1,64275:1,64553:1,64566:1,64603:1,65010:3,65140:1,65162:1,65183:1,65189:1,65256:1,65313:1,65365:1,65411:2,65632:1,65820:2,65881:1,66055:1,66119:2,66209:1,66228:1,66323:1,66512:1,66674:1,66675:1,66688:1,66887:1,66929:1,66945:1,67028:1,67045:2,67097:1,67122:1,67505:1,67541:2,67570:1,67586:1,67600:3,67625:5,67660:1,67752:1,67910:1,67931:1,67985:1,68043:4,68094:1,68113:2,68146:3,68191:2,68352:2,68606:5,68779:2,68802:1,68840:1,68915:1,68942:1,69078:1,69230:1,69236:1,69439:2,69509:1,69609:1,69741:1,69823:1,70245:3,70257:2,70283:1,70287:1,70321:2,70343:1,70356:1,70871:1,70966:2,71020:1,71054:1 109 154 1.413 1.000 4 TCGA:I 14760906 chr17 42912841 43173333 260493 + 0 GC AG 0 0 ,60547:1,61686:1,67625:1,69304:1 4 4 1.000 1.000 4 TCGA:I 14760909 chr17 42912915 43062213 149299 - 0 GC AG 0 0 ,62278:1,64891:1 2 2 1.000 1.000 4 TCGA:I 14760910 chr17 42912915 43333219 420305 - 0 GC AG 0 0 ,61998:1,62068:1,65313:1,65820:1,66209:1,70085:1,70347:1 7 7 1.000 1.000 4 TCGA:I 14760912 chr17 42912957 43046392 133436 + 0 GC AG 0 0 ,69801:1 1 1 1.000 1.000 4 TCGA:I 14760913 chr17 42913005 43045005 132001 - 0 AT AC 0 0 ,67909:1 1 1 1.000 1.000 4 TCGA:I 14760914 chr17 42913014 43045014 132001 + 0 GC AG 0 0 ,67909:1 1 1 1.000 1.000 4 TCGA:I 14760932 chr17 42913912 43376619 462708 + 0 GC AG 0 0 ,61572:1 1 1 1.000 1.000 4 TCGA:I 14760933 chr17 42913914 43376621 462708 - 0 GC AG 0 0 ,61572:1 1 1 1.000 1.000 4 TCGA:I 14760947 chr17 42914146 43130524 216379 + 0 GC AG 0 0 ,69431:1,70221:1 2 2 1.000 1.000 4 TCGA:I 14760965 chr17 42914733 43377129 462397 + 0 AT AC 0 0 ,61289:1,68947:1 2 2 1.000 1.000 4 TCGA:I 14760979 chr17 42915494 43217903 302410 + 0 GC AG 0 0 ,62682:1 1 1 1.000 1.000 4 TCGA:I 14760985 chr17 42915566 43056433 140868 - 0 GC AG 0 0 ,62567:1 1 1 1.000 1.000 4 TCGA:I 14760991 chr17 42915664 43307858 392195 + 0 GC AG 0 0 ,62503:1,63604:1,65126:1,68113:1 4 4 1.000 1.000 4 TCGA:I 14760992 chr17 42915664 43401846 486183 + 0 GC AG 0 0 ,68132:1 1 1 1.000 1.000 4 TCGA:I 14761001 chr17 42915876 43168574 252699 + 0 GT AG 0 0 ,60509:1,62227:1,65813:1,68342:1 4 4 1.000 1.000 4 TCGA:I 14761010 chr17 42916298 43312196 395899 + 0 GC AG 0 0 ,59979:1,60004:1,60066:1,60141:1,60183:1,60319:1,60358:1,60506:1,60509:3,60530:1,60535:2,60547:1,60691:2,60779:1,60906:2,60950:1,61072:1,61079:1,61190:1,61264:2,61289:4,61432:1,61446:2,61492:1,61503:3,61660:1,61685:1,61686:2,61811:1,61860:1,61861:1,61883:1,62117:1,62150:1,62227:1,62278:1,62350:1,62370:1,62402:1,62453:2,62504:2,62602:1,62836:1,63036:3,63054:1,63250:1,63265:2,63330:1,63497:1,63507:2,63604:4,63617:1,63618:1,63716:1,63723:1,63852:2,63875:1,63897:2,63940:3,63951:1,63988:1,63999:4,64040:2,64065:1,64066:1,64144:1,64146:1,64419:1,64437:4,64486:1,64537:1,64553:4,64577:1,64655:1,64670:3,64891:2,65010:1,65036:1,65084:2,65243:1,65365:1,65382:1,65411:2,65413:1,65641:2,65734:3,65818:1,65820:1,65823:1,65846:1,65881:2,65954:1,65974:1,66055:2,66086:1,66092:1,66119:2,66228:1,66409:1,66447:1,66452:1,66506:1,66726:1,66742:2,66929:2,67028:1,67037:3,67045:4,67083:1,67097:1,67290:1,67348:2,67359:2,67388:1,67505:1,67541:1,67598:1,67600:2,67636:1,67660:1,67752:4,67772:1,67910:1,67917:2,67952:1,67957:1,67964:2,67985:1,68041:3,68043:3,68094:1,68102:1,68113:4,68146:4,68179:4,68191:1,68214:1,68230:2,68252:1,68295:1,68352:1,68403:2,68721:1,69006:2,69033:1,69142:2,69212:1,69230:1,69236:2,69282:1,69286:1,69304:5,69325:1,69332:1,69509:6,69670:4,69712:3,69801:1,70085:1,70212:1,70245:1,70283:1,70284:2,70343:2,70563:1,70584:5,70637:3,70871:1,70928:1,70966:2,71008:1,71054:1 172 275 1.599 1.000 4 TCGA:I 14761011 chr17 42916303 43312201 395899 + 0 GC AG 0 0 ,59979:1,60004:1,60066:1,60141:1,60183:1,60319:1,60358:1,60506:1,60509:3,60530:1,60535:2,60547:1,60691:2,60779:1,60906:2,60950:1,61072:1,61079:1,61190:1,61264:2,61289:4,61432:1,61446:2,61492:1,61503:3,61660:1,61685:1,61686:2,61811:1,61860:1,61861:1,61883:1,62117:1,62150:1,62227:1,62278:1,62350:1,62370:1,62402:1,62453:2,62504:2,62602:1,62836:1,63036:3,63054:1,63250:1,63265:2,63330:1,63497:1,63507:2,63604:4,63617:1,63618:1,63716:1,63723:1,63852:2,63875:1,63897:2,63940:3,63951:1,63988:1,63999:4,64040:2,64065:1,64066:1,64144:1,64146:1,64419:1,64437:4,64486:1,64537:1,64553:4,64577:1,64655:1,64670:3,64891:2,65010:1,65036:1,65084:2,65243:1,65365:1,65382:1,65411:2,65413:1,65641:2,65734:3,65818:1,65820:1,65823:1,65846:1,65881:2,65954:1,65974:1,66055:2,66086:1,66092:1,66119:2,66228:1,66409:1,66447:1,66452:1,66506:1,66726:1,66742:2,66929:2,67028:1,67037:3,67045:4,67083:1,67097:1,67290:1,67348:2,67359:2,67388:1,67505:1,67541:1,67598:1,67600:2,67636:1,67660:1,67752:4,67772:1,67910:1,67917:2,67952:1,67957:1,67964:2,67985:1,68041:3,68043:3,68094:1,68102:1,68113:4,68146:4,68179:4,68191:1,68214:1,68230:2,68252:1,68295:1,68352:1,68403:2,68721:1,69006:2,69033:1,69142:2,69212:1,69230:1,69236:2,69282:1,69286:1,69304:5,69325:1,69332:1,69509:6,69670:4,69712:3,69801:1,70085:1,70212:1,70245:1,70283:1,70284:2,70343:2,70563:1,70584:5,70637:3,70871:1,70928:1,70966:2,71008:1,71054:1 172 275 1.599 1.000 4 TCGA:I 14761028 chr17 42917117 43403463 486347 - 0 GC AG 0 0 ,64056:1 1 1 1.000 1.000 4 TCGA:I 14761030 chr17 42917228 43077588 160361 - 0 GC AG 0 0 ,61040:1,61299:1,62100:1,62296:1,62976:1,63622:1,64040:1,65726:1,66360:1,68622:1 10 10 1.000 1.000 4 TCGA:I 14761032 chr17 42917251 43077611 160361 + 0 GT AG 0 0 ,61299:1,62100:1,62296:1,62976:1,64040:1,65726:1,66360:1,68622:1 8 8 1.000 1.000 4 TCGA:I 14761042 chr17 42918006 43108608 190603 + 0 GC AG 0 0 ,60182:1,60214:1,60906:1,61567:1,61884:1,62088:1,62457:1,62836:1,63250:1,63607:1,63776:1,63861:1,63969:1,64069:1,64305:1,64534:1,64742:1,65001:1,66263:1,66428:1,66813:1,66945:1,67078:1,67726:1,67814:1,68303:1,68439:1,68775:1,69194:1,69348:1,69494:1,69606:1,69648:1,69651:1,69775:1,70142:1,70518:1,70616:1,70657:1,70980:1 40 40 1.000 1.000 4 TCGA:I 14761043 chr17 42918025 43375821 457797 - 0 GT AG 0 0 ,64906:1,68427:1,68755:1 3 3 1.000 1.000 4 TCGA:I 14761045 chr17 42918032 43375828 457797 + 0 GT AG 0 0 ,64906:1,68427:1,68755:1 3 3 1.000 1.000 4 TCGA:I 14761065 chr17 42919699 43057408 137710 + 0 GC AG 0 0 ,69544:1 1 1 1.000 1.000 4 TCGA:I 14761066 chr17 42919705 43057414 137710 + 0 GC AG 0 0 ,69544:1 1 1 1.000 1.000 4 TCGA:I 14761067 chr17 42919737 43218596 298860 + 0 GT AG 0 0 ,68632:1 1 1 1.000 1.000 4 TCGA:I 14761068 chr17 42920170 43219254 299085 + 0 GC AG 0 0 ,66228:1 1 1 1.000 1.000 4 TCGA:I 14761070 chr17 42920641 43087974 167334 - 0 GT AG 0 0 ,66648:1,67532:1 2 2 1.000 1.000 4 TCGA:I 14761099 chr17 42924249 43202115 277867 + 0 GT AG 0 0 ,60770:1 1 1 1.000 1.000 4 TCGA:I 14761102 chr17 42924520 43136061 211542 + 0 GC AG 0 0 ,64367:1 1 1 1.000 1.000 4 TCGA:I 14761106 chr17 42925136 43346914 421779 - 0 AT AC 0 0 ,65444:1 1 1 1.000 1.000 4 TCGA:I 14761108 chr17 42925462 43309506 384045 - 0 GT AG 0 0 ,69246:1 1 1 1.000 1.000 4 TCGA:I 14761115 chr17 42926327 43376515 450189 + 0 GT AG 0 0 ,66366:1 1 1 1.000 1.000 4 TCGA:I 14761116 chr17 42926336 43376524 450189 - 0 GT AG 0 0 ,66366:1 1 1 1.000 1.000 4 TCGA:I 14761117 chr17 42926340 43376528 450189 - 0 GC AG 0 0 ,66366:1 1 1 1.000 1.000 4 TCGA:I 14761119 chr17 42926571 43211133 284563 + 0 GC AG 0 0 ,64932:1 1 1 1.000 1.000 4 TCGA:I 14761121 chr17 42926717 43404933 478217 - 0 GC AG 0 0 ,70978:1 1 1 1.000 1.000 4 TCGA:I 14761124 chr17 42926891 43422270 495380 - 0 AT AC 0 0 ,65474:1 1 1 1.000 1.000 4 TCGA:I 14761131 chr17 42927933 43225778 297846 + 0 GC AG 0 0 ,64142:1 1 1 1.000 1.000 4 TCGA:I 14761133 chr17 42927976 43139444 211469 - 0 GC AG 0 0 ,61198:1,61779:1,63148:1,63778:1,63862:1,64656:1,67486:1,67974:1,68797:1,69424:1 10 10 1.000 1.000 4 TCGA:I 14761134 chr17 42927983 43139451 211469 + 0 GT AG 0 0 ,61198:1,61779:1,63148:1,63778:1,63862:1,64656:1,67486:1,67974:1,68797:1,69424:1 10 10 1.000 1.000 4 TCGA:I 14761137 chr17 42928090 43046124 118035 - 0 AT AC 0 0 ,67104:1,67727:1,68685:1 3 3 1.000 1.000 4 TCGA:I 14761139 chr17 42928099 43046133 118035 + 0 GC AG 0 0 ,67104:1,67727:1,68685:1 3 3 1.000 1.000 4 TCGA:I 14761140 chr17 42928421 43046133 117713 + 0 GC AG 0 0 ,67104:1,67727:1,68685:1 3 3 1.000 1.000 4 TCGA:I 14761141 chr17 42928685 43209905 281221 - 0 AT AC 0 0 ,63935:1 1 1 1.000 1.000 4 TCGA:I 14761142 chr17 42928690 43139921 211232 - 0 GT AG 0 0 ,70497:1 1 1 1.000 1.000 4 TCGA:I 14761143 chr17 42928823 43231787 302965 - 0 GC AG 0 0 ,62291:1,62551:2,66632:1,66961:1 4 5 1.250 1.000 4 TCGA:I 14761157 chr17 42930695 43176647 245953 + 0 AT AC 0 0 ,69587:1 1 1 1.000 1.000 4 TCGA:I 14761158 chr17 42930823 43200170 269348 + 0 AT AC 0 0 ,62549:1 1 1 1.000 1.000 4 TCGA:I 14761159 chr17 42930829 43200176 269348 - 0 GC AG 0 0 ,62549:1 1 1 1.000 1.000 4 TCGA:I 14761160 chr17 42930870 43210432 279563 - 0 AT AC 0 0 ,70628:1 1 1 1.000 1.000 4 TCGA:I 14761161 chr17 42931124 43139217 208094 + 0 GT AG 0 0 ,70725:1 1 1 1.000 1.000 4 TCGA:I 14761166 chr17 42931478 43233290 301813 + 0 GC AG 0 0 ,66079:1 1 1 1.000 1.000 4 TCGA:I 14761169 chr17 42931826 43085283 153458 - 0 GT AG 0 0 ,63684:1 1 1 1.000 1.000 4 TCGA:I 14761171 chr17 42932504 43346628 414125 + 0 GC AG 0 0 ,63300:1 1 1 1.000 1.000 4 TCGA:I 14761173 chr17 42932942 43323245 390304 - 0 GC AG 0 0 ,70657:1 1 1 1.000 1.000 4 TCGA:I 14761174 chr17 42933308 43045278 111971 + 0 GT AG 0 0 ,62559:1,64238:1 2 2 1.000 1.000 4 TCGA:I 14761177 chr17 42934129 43231607 297479 + 0 GC AG 0 0 ,59791:1,61679:1,65674:1,66250:1,67415:1,67725:1,68065:1,68712:1 8 8 1.000 1.000 4 TCGA:I 14761181 chr17 42935180 43054824 119645 - 0 GT AG 0 0 ,60373:1,69996:1 2 2 1.000 1.000 4 TCGA:I 14761183 chr17 42935452 43155577 220126 + 0 GC AG 0 0 ,62551:4 1 4 4.000 4.000 4 TCGA:I 14761184 chr17 42935452 43187935 252484 + 0 GC AG 0 0 ,62585:2 1 2 2.000 2.000 4 TCGA:I 14761185 chr17 42935460 43225086 289627 + 0 GC AG 0 0 ,67893:1 1 1 1.000 1.000 4 TCGA:I 14761186 chr17 42935541 43161786 226246 + 0 GT AG 0 0 ,70413:1 1 1 1.000 1.000 4 TCGA:I 14761188 chr17 42935649 43178621 242973 - 0 GC AG 0 0 ,60396:1,62531:1,65497:1,70384:1 4 4 1.000 1.000 4 TCGA:I 14761194 chr17 42936031 43159125 223095 - 0 GT AG 0 kG19 ,61813:1 1 1 1.000 1.000 4 TCGA:I 14761195 chr17 42936147 43322788 386642 - 0 GT AG 0 0 ,60440:1 1 1 1.000 1.000 4 TCGA:I 14761196 chr17 42936211 43194420 258210 - 0 GC AG 0 0 ,69378:1 1 1 1.000 1.000 4 TCGA:I 14761199 chr17 42936875 43092388 155514 - 0 GT AG 0 0 ,68128:1 1 1 1.000 1.000 4 TCGA:I 14761202 chr17 42937379 43053738 116360 + 0 GT AG 0 0 ,70140:1 1 1 1.000 1.000 4 TCGA:I 14761210 chr17 42937580 43217738 280159 - 0 AT AC 0 0 ,62969:1 1 1 1.000 1.000 4 TCGA:I 14761216 chr17 42937912 43044832 106921 + 0 GC AG 0 0 ,67155:1 1 1 1.000 1.000 4 TCGA:I 14761217 chr17 42937924 43236930 299007 - 0 GT AG 0 0 ,65857:1 1 1 1.000 1.000 4 TCGA:I 14761219 chr17 42937990 43196539 258550 - 0 GC AG 0 0 ,67324:1 1 1 1.000 1.000 4 TCGA:I 14761221 chr17 42938070 43352022 413953 + 0 GT AG 0 0 ,61464:1 1 1 1.000 1.000 4 TCGA:I 14761222 chr17 42938115 43424525 486411 + 0 GT AG 0 0 ,68768:1 1 1 1.000 1.000 4 TCGA:I 14761224 chr17 42938162 43226052 287891 + 0 AT AC 0 0 ,66839:1 1 1 1.000 1.000 4 TCGA:I 14761227 chr17 42938788 43164916 226129 - 0 AT AC 0 0 ,65027:1 1 1 1.000 1.000 4 TCGA:I 14761231 chr17 42939508 43078226 138719 + 0 GT AG 0 0 ,60034:1 1 1 1.000 1.000 4 TCGA:I 14761233 chr17 42939539 43145665 206127 + 0 GT AG 0 0 ,60624:1 1 1 1.000 1.000 4 TCGA:I 14761238 chr17 42940337 43425846 485510 - 0 GC AG 0 0 ,60073:1,60261:1,60557:1,61990:1,62153:1,62282:1,62980:1,64143:1,64743:1,64992:1,65771:1,66174:1,66461:1,67672:1,68037:1,68235:1,69054:1,69141:1,70567:1 19 19 1.000 1.000 4 TCGA:I 14761239 chr17 42940343 43425852 485510 - 0 GC AG 0 0 ,60073:1,60261:1,60557:1,61990:1,62153:1,62282:1,62980:1,64143:1,64743:1,64992:1,65771:1,66174:1,66461:1,67672:1,68037:1,68235:1,69054:1,69141:1,70567:1 19 19 1.000 1.000 4 TCGA:I 14761240 chr17 42940887 43322981 382095 + 0 AT AC 0 0 ,60006:1,69036:1 2 2 1.000 1.000 4 TCGA:I 14761242 chr17 42941541 43420963 479423 - 0 GC AG 0 0 ,68069:1 1 1 1.000 1.000 4 TCGA:I 14761248 chr17 42942242 43214834 272593 - 0 GT AG 0 0 ,62550:1 1 1 1.000 1.000 4 TCGA:I 14761251 chr17 42942696 43102609 159914 - 0 GC AG 0 0 ,69513:1 1 1 1.000 1.000 4 TCGA:I 14761253 chr17 42942933 43226276 283344 + 0 GC AG 0 0 ,60752:1,66498:1,68416:1,70428:1 4 4 1.000 1.000 4 TCGA:I 14761255 chr17 42943024 43195275 252252 + 0 GC AG 0 0 ,64156:1,66840:1,67657:1,68260:1,68632:1,69933:1 6 6 1.000 1.000 4 TCGA:I 14761256 chr17 42943352 43211022 267671 + 0 GT AG 0 0 ,62755:1 1 1 1.000 1.000 4 TCGA:I 14761263 chr17 42944047 43046690 102644 + 0 GT AG 0 0 ,70743:1 1 1 1.000 1.000 4 TCGA:I 14761264 chr17 42944084 43229686 285603 - 0 GC AG 0 0 ,64010:2 1 2 2.000 2.000 4 TCGA:I 14761265 chr17 42944084 43377252 433169 - 0 GC AG 0 0 ,64072:1 1 1 1.000 1.000 4 TCGA:I 14761266 chr17 42944084 43424594 480511 - 0 GC AG 0 0 ,61223:1,70849:1 2 2 1.000 1.000 4 TCGA:I 14761268 chr17 42944212 43133933 189722 - 0 GC AG 0 0 ,68921:1 1 1 1.000 1.000 4 TCGA:I 14761269 chr17 42944417 43352461 408045 + 0 GT AG 0 0 ,62413:1,66090:1 2 2 1.000 1.000 4 TCGA:I 14761276 chr17 42944741 43108153 163413 + 0 AT AC 0 0 ,60328:1 1 1 1.000 1.000 4 TCGA:I 14761281 chr17 42944823 43367394 422572 + 0 GC AG 0 0 ,59948:1,60585:1,61517:1,63471:1,63797:1,65499:1,66497:1,67298:1,68530:1,68664:1 10 10 1.000 1.000 4 TCGA:I 14761283 chr17 42944829 43390746 445918 + 0 GC AG 0 0 ,66317:1,69477:1 2 2 1.000 1.000 4 TCGA:I 14761288 chr17 42945238 43192617 247380 - 0 GC AG 0 0 ,68621:1,69026:1 2 2 1.000 1.000 4 TCGA:I 14761289 chr17 42945255 43237116 291862 - 0 GC AG 0 0 ,66441:1 1 1 1.000 1.000 4 TCGA:I 14761291 chr17 42945413 43195271 249859 + 0 GC AG 0 0 ,67067:1 1 1 1.000 1.000 4 TCGA:I 14761294 chr17 42946440 43217830 271391 - 0 GT AG 0 0 ,66778:1 1 1 1.000 1.000 4 TCGA:I 14761295 chr17 42946447 43217837 271391 - 0 GT AG 0 0 ,66778:1 1 1 1.000 1.000 4 TCGA:I 14761297 chr17 42946453 43225288 278836 - 0 GC AG 0 0 ,63636:1 1 1 1.000 1.000 4 TCGA:I 14761298 chr17 42946453 43227066 280614 - 0 GT AG 0 0 ,69521:1 1 1 1.000 1.000 4 TCGA:I 14761312 chr17 42947729 43154354 206626 + 0 GC AG 0 0 ,63292:1,63489:1 2 2 1.000 1.000 4 TCGA:I 14761313 chr17 42947729 43226009 278281 + 0 GC AG 0 0 ,70529:1 1 1 1.000 1.000 4 TCGA:I 14761316 chr17 42947733 43154358 206626 - 0 GC AG 0 0 ,63292:1,63489:1 2 2 1.000 1.000 4 TCGA:I 14761319 chr17 42948155 43200349 252195 - 0 GC AG 0 0 ,68742:1 1 1 1.000 1.000 4 TCGA:I 14761322 chr17 42948584 43390746 442163 + 0 GT AG 0 0 ,70156:1 1 1 1.000 1.000 4 TCGA:I 14761323 chr17 42948597 43125235 176639 - 0 GT AG 0 0 ,67717:1 1 1 1.000 1.000 4 TCGA:I 14761325 chr17 42948700 43108733 160034 + 0 GC AG 0 0 ,69032:1,70607:1 2 2 1.000 1.000 4 TCGA:I 14761327 chr17 42948705 43108738 160034 + 0 GC AG 0 0 ,69032:1,70607:1 2 2 1.000 1.000 4 TCGA:I 14761328 chr17 42948763 43370423 421661 - 0 GT AG 0 0 ,68180:1 1 1 1.000 1.000 4 TCGA:I 14761329 chr17 42948768 43370428 421661 + 0 GT AG 0 0 ,68180:1 1 1 1.000 1.000 4 TCGA:I 14761332 chr17 42948953 43168611 219659 - 0 GC AG 0 0 ,66632:1 1 1 1.000 1.000 4 TCGA:I 14761338 chr17 42949869 43195008 245140 + 0 GT AG 0 0 ,66268:1 1 1 1.000 1.000 4 TCGA:I 14761339 chr17 42949948 43305557 355610 - 0 GC AG 0 0 ,64976:1 1 1 1.000 1.000 4 TCGA:I 14761346 chr17 42950149 43401890 451742 + 0 GC AG 0 0 ,67171:1 1 1 1.000 1.000 4 TCGA:I 14761349 chr17 42950155 43157599 207445 + 0 GC AG 0 0 ,69417:1 1 1 1.000 1.000 4 TCGA:I 14761350 chr17 42950155 43401896 451742 + 0 GC AG 0 0 ,67171:1 1 1 1.000 1.000 4 TCGA:I 14761374 chr17 42950669 43383680 433012 + 0 GC AG 0 0 ,71032:1 1 1 1.000 1.000 4 TCGA:I 14761384 chr17 42950688 43218252 267565 - 0 GC AG 0 0 ,64108:1 1 1 1.000 1.000 4 TCGA:I 14761410 chr17 42950719 43183773 233055 - 0 GT AG 0 0 ,63152:1 1 1 1.000 1.000 4 TCGA:I 14761433 chr17 42950874 43186379 235506 + 0 AT AC 0 0 ,61993:1 1 1 1.000 1.000 4 TCGA:I 14761448 chr17 42950966 43120871 169906 - 0 GC AG 0 0 ,60574:1,65782:1,69288:1,70384:1 4 4 1.000 1.000 4 TCGA:I 14761454 chr17 42951231 43203149 251919 + 0 AT AC 0 0 ,67306:1 1 1 1.000 1.000 4 TCGA:I 14761456 chr17 42951292 43137751 186460 - 0 GT AG 0 0 ,60295:1 1 1 1.000 1.000 4 TCGA:I 14761493 chr17 42951858 43133952 182095 - 0 GT AG 0 0 ,65545:1 1 1 1.000 1.000 4 TCGA:I 14761494 chr17 42951858 43145037 193180 - 0 GT AG 0 0 ,68930:1 1 1 1.000 1.000 4 TCGA:I 14761505 chr17 42951890 43195141 243252 - 0 AT AC 0 0 ,60316:2,61663:1,62635:1,63239:1,68592:1,70412:1 6 7 1.167 1.000 4 TCGA:I 14761532 chr17 42951895 43125276 173382 - 0 GT AG aC19,cG19,cG38,gC19,gC38,kG19,kG38,mG19,mG38,rG19,rG38,sG19,sG38,vG19 aC19,gC19,gC38,kG19,kG38,rG19,rG38,sG38,vG19 ,65731:2,66493:6 2 8 4.000 4.000 4 TCGA:I 14761533 chr17 42951895 43251676 299782 - 0 GT AG aC19,cG19,cG38,gC19,gC38,kG19,kG38,mG19,mG38,rG19,rG38,sG19,sG38,vG19 0 ,69422:1 1 1 1.000 1.000 4 TCGA:I 14761541 chr17 42952191 43432060 479870 + 0 AT AC 0 0 ,67383:1,69202:1 2 2 1.000 1.000 4 TCGA:I 14761556 chr17 42952242 43221455 269214 - 0 GC AG 0 0 ,69288:1 1 1 1.000 1.000 4 TCGA:I 14761557 chr17 42952242 43234255 282014 - 0 GC AG 0 0 ,67983:1 1 1 1.000 1.000 4 TCGA:I 14761558 chr17 42952242 43451902 499661 - 0 GC AG 0 0 ,59997:1 1 1 1.000 1.000 4 TCGA:I 14761583 chr17 42952574 43068479 115906 + 0 GT AG 0 0 ,60140:1,61797:1,63195:1,67124:1,68535:1 5 5 1.000 1.000 4 TCGA:I 14761592 chr17 42952643 43202152 249510 - 0 GC AG 0 0 ,65928:1 1 1 1.000 1.000 4 TCGA:I 14761631 chr17 42953094 43423359 470266 - 0 GC AG 0 0 ,63965:1 1 1 1.000 1.000 4 TCGA:I 14761637 chr17 42953139 43100890 147752 - 0 GC AG 0 0 ,61299:2 1 2 2.000 2.000 4 TCGA:I 14761669 chr17 42953388 43055027 101640 + 0 GC AG 0 0 ,70365:1 1 1 1.000 1.000 4 TCGA:I 14761737 chr17 42954210 43185420 231211 - 0 GC AG 0 0 ,67443:1 1 1 1.000 1.000 4 TCGA:I 14761746 chr17 42954254 43204712 250459 + 0 GC AG 0 0 ,69288:1 1 1 1.000 1.000 4 TCGA:I 14761747 chr17 42954254 43304978 350725 + 0 GC AG 0 0 ,67082:1 1 1 1.000 1.000 4 TCGA:I 14761758 chr17 42954412 43193210 238799 + 0 GC AG 0 0 ,69474:1 1 1 1.000 1.000 4 TCGA:I 14761760 chr17 42954480 43218094 263615 + 0 GC AG 0 0 ,64278:1,65797:2,66808:1 3 4 1.333 1.000 4 TCGA:I 14761773 chr17 42954594 43287895 333302 - 0 GC AG 0 0 ,60132:1 1 1 1.000 1.000 4 TCGA:I 14761786 chr17 42954911 43220941 266031 - 0 AT AC 0 0 ,59838:1,59866:1,59928:1,59941:1,59992:1,60038:1,60041:1,60347:1,60443:1,60516:1,60527:1,60535:1,60613:1,60710:1,60768:1,60799:1,60804:1,60834:1,60931:1,61140:1,61344:2,61372:1,61471:1,61530:1,61540:1,61585:1,61630:1,61878:1,61894:1,61903:1,61921:1,61927:1,62002:1,62026:1,62261:1,62365:1,62624:1,62655:1,62742:1,62941:1,63099:1,63315:1,63340:1,63443:1,63583:1,63805:1,63878:1,63893:1,64026:1,64030:1,64141:1,64145:1,64262:1,64321:1,64434:1,64546:1,64630:2,64865:1,65013:1,65114:1,65330:1,65390:1,65411:1,65428:1,65445:1,65543:1,65666:1,65806:1,65885:1,66332:1,66381:1,66498:1,66504:1,66724:1,66769:1,66787:1,66913:1,66925:2,66935:2,67018:1,67033:1,67076:1,67137:1,67280:1,67294:1,67303:1,67379:1,67400:1,67446:1,67522:1,67617:1,67974:1,68174:1,68242:3,68284:1,68658:1,68680:1,69326:1,69344:1,69443:1,69524:1,69529:1,69562:1,69645:1,69768:1,69861:1,69997:1,70142:1,70185:1,70275:1,70287:1,70770:1,70828:1,70856:1,71037:1,71098:1 116 122 1.052 1.000 4 TCGA:I 14761788 chr17 42954920 43220950 266031 + 0 GC AG 0 0 ,59838:1,59866:1,59928:1,59941:1,59992:1,60038:1,60041:1,60347:1,60443:1,60516:1,60527:1,60535:1,60613:1,60710:1,60768:1,60799:1,60804:1,60834:1,60931:1,61140:1,61344:2,61372:1,61471:1,61530:1,61540:1,61585:1,61630:1,61878:1,61894:1,61903:1,61921:1,61927:1,62002:1,62026:1,62261:1,62365:1,62624:1,62655:1,62742:1,62941:1,63099:1,63315:1,63340:1,63443:1,63583:1,63805:1,63878:1,63893:1,64026:1,64030:1,64141:1,64145:1,64262:1,64321:1,64434:1,64546:1,64630:2,64865:1,65114:1,65330:1,65390:1,65411:1,65428:1,65445:1,65543:1,65666:1,65806:1,65885:1,66332:1,66381:1,66498:1,66504:1,66724:1,66769:1,66787:1,66913:1,66925:2,66935:2,67018:1,67033:1,67076:1,67137:1,67280:1,67294:1,67303:1,67379:1,67400:1,67446:1,67522:1,67617:1,67974:1,68174:1,68242:3,68284:1,68658:1,68680:1,69326:1,69344:1,69443:1,69524:1,69529:1,69562:1,69645:1,69768:1,69997:1,70142:1,70185:1,70275:1,70287:1,70770:1,70828:1,70856:1,71037:1,71098:1 114 120 1.053 1.000 4 TCGA:I 14761791 chr17 42954932 43348292 393361 - 0 AT AC 0 0 ,59831:1 1 1 1.000 1.000 4 TCGA:I 14761803 chr17 42954944 43353969 399026 + 0 GT AG 0 0 ,62635:1,65173:1,66802:1 3 3 1.000 1.000 4 TCGA:I 14761837 chr17 42955206 43084265 129060 + 0 AT AC 0 0 ,61644:1,61700:1,62575:2,64563:1,64898:2,65214:1,65245:1,67067:1,68385:1,69785:1,70044:1 11 13 1.182 1.000 4 TCGA:I 14761861 chr17 42955225 43102303 147079 - 0 GT AG aC19,cG19,cG38,gC19,gC38,kG19,kG38,mG19,mG38,rG19,rG38,sG19,sG38,vG19 0 ,64932:1 1 1 1.000 1.000 4 TCGA:I 14761908 chr17 42955696 43065084 109389 - 0 GC AG 0 0 ,62579:1 1 1 1.000 1.000 4 TCGA:I 14761924 chr17 42955925 43072774 116850 + 0 GT AG 0 0 ,62276:1 1 1 1.000 1.000 4 TCGA:I 14761926 chr17 42955934 43220941 265008 - 0 AT AC 0 0 ,61846:2,63811:1,64827:3,65084:1 4 7 1.750 1.500 4 TCGA:I 14761972 chr17 42956228 43220496 264269 + 0 AT AC 0 0 ,60452:1,60503:1,61116:1,61456:1,61903:1,61965:1,62003:1,62612:1,62817:1,63238:1,63397:1,63795:1,63927:1,64658:1,65177:1,65935:1,66958:1,67322:1,68185:1,68308:1,68512:1,68715:1,68880:1,68885:1,68888:1,69956:1,70444:1 27 27 1.000 1.000 4 TCGA:I 14762013 chr17 42956428 43135715 179288 + 0 GC AG 0 0 ,61499:1 1 1 1.000 1.000 4 TCGA:I 14762016 chr17 42956460 43146801 190342 - 0 GT AG 0 0 ,70514:1 1 1 1.000 1.000 4 TCGA:I 14762037 chr17 42956522 43045714 89193 + 0 GT AG 0 0 ,60524:1 1 1 1.000 1.000 4 TCGA:I 14762056 chr17 42956660 43403312 446653 - 0 GC AG 0 0 ,60529:1 1 1 1.000 1.000 4 TCGA:I 14762070 chr17 42957081 43173237 216157 - 0 GC AG 0 0 ,70970:1 1 1 1.000 1.000 4 TCGA:I 14762110 chr17 42957196 43170125 212930 - 0 GT AG aC19,cG19,cG38,gC19,gC38,kG19,kG38,mG19,mG38,rG19,rG38,sG38,vG19 aC19,gC19,gC38,kG19,kG38,rG19,rG38,sG19,sG38 ,64284:2 1 2 2.000 2.000 4 TCGA:I 14762111 chr17 42957196 43233750 276555 - 0 GT AG aC19,cG19,cG38,gC19,gC38,kG19,kG38,mG19,mG38,rG19,rG38,sG38,vG19 0 ,68335:1 1 1 1.000 1.000 4 TCGA:I 14762123 chr17 42957553 43185061 227509 - 0 GC AG 0 0 ,64061:1 1 1 1.000 1.000 4 TCGA:I 14762127 chr17 42957585 43101616 144032 - 0 GC AG 0 0 ,63661:1 1 1 1.000 1.000 4 TCGA:I 14762128 chr17 42957585 43204689 247105 - 0 GT AG 0 0 ,63160:1 1 1 1.000 1.000 4 TCGA:I 14762149 chr17 42958056 43194349 236294 + 0 GT AG 0 aC19,cG19,cG38,gC19,gC38,kG19,kG38,mG19,mG38,rG19,rG38,sG19,sG38 ,70758:1 1 1 1.000 1.000 4 TCGA:I 14762170 chr17 42958327 43174919 216593 - 0 GT AG 0 0 ,71060:1 1 1 1.000 1.000 4 TCGA:I 14762175 chr17 42958465 43206869 248405 - 0 GC AG 0 0 ,60675:1,62849:1,62913:1,63184:1,68759:1,68919:1,69858:1 7 7 1.000 1.000 4 TCGA:I 14762176 chr17 42958465 43207037 248573 - 0 GC AG 0 0 ,60675:1,62849:1,62913:1,63184:1,68759:1,68919:1,69858:1 7 7 1.000 1.000 4 TCGA:I 14762177 chr17 42958465 43414172 455708 - 0 GC AG 0 0 ,61469:1 1 1 1.000 1.000 4 TCGA:I 14762191 chr17 42958769 43362691 403923 - 0 AT AC 0 0 ,61835:1 1 1 1.000 1.000 4 TCGA:I 14762192 chr17 42958769 43398008 439240 - 0 AT AC 0 0 ,68488:1 1 1 1.000 1.000 4 TCGA:I 14762194 chr17 42958778 43129686 170909 + 0 GT AG 0 0 ,60445:1 1 1 1.000 1.000 4 TCGA:I 14762216 chr17 42959127 43111751 152625 + 0 GC AG 0 0 ,67904:1,69520:1 2 2 1.000 1.000 4 TCGA:I 14762217 chr17 42959127 43439378 480252 + 0 GC AG 0 0 ,60387:1,62731:1,67866:1,68088:1,71102:1 5 5 1.000 1.000 4 TCGA:I 14762219 chr17 42959133 43111757 152625 + 0 GT AG 0 0 ,62963:1,63014:2,69477:1 3 4 1.333 1.000 4 TCGA:I 14762222 chr17 42959301 43047853 88553 - 0 GT AG 0 0 ,65615:1,68449:1,70990:1 3 3 1.000 1.000 4 TCGA:I 14762223 chr17 42959301 43200950 241650 - 0 GT AG 0 0 ,67155:1 1 1 1.000 1.000 4 TCGA:I 14762224 chr17 42959307 43147092 187786 - 0 GC AG 0 0 ,67298:1 1 1 1.000 1.000 4 TCGA:I 14762226 chr17 42959330 43147115 187786 - 0 GC AG 0 0 ,67298:1 1 1 1.000 1.000 4 TCGA:I 14762228 chr17 42959359 43116661 157303 + 0 GC AG 0 0 ,59995:2 1 2 2.000 2.000 4 TCGA:I 14762234 chr17 42959483 43102609 143127 - 0 GC AG 0 0 ,60763:1,68251:1,68587:1 3 3 1.000 1.000 4 TCGA:I 14762236 chr17 42959589 43225264 265676 - 0 GC AG 0 0 ,60288:1,60578:1,60908:1,61554:1,61756:1,61965:1,62604:1,65053:1,65071:1,65512:1,65526:1,65538:1,65932:1,66253:1,68995:1 15 15 1.000 1.000 4 TCGA:I 14762257 chr17 42960011 43137926 177916 - 0 GT AG 0 0 ,63992:1 1 1 1.000 1.000 4 TCGA:I 14762259 chr17 42960076 43144827 184752 - 0 GC AG 0 0 ,68685:1,69293:1,70503:1 3 3 1.000 1.000 4 TCGA:I 14762263 chr17 42960167 43154248 194082 + 0 GC AG 0 0 ,63207:1 1 1 1.000 1.000 4 TCGA:I 14762265 chr17 42960173 43154254 194082 + 0 GC AG 0 0 ,63207:1 1 1 1.000 1.000 4 TCGA:I 14762267 chr17 42960204 43309129 348926 + 0 GT AG 0 0 ,64176:1 1 1 1.000 1.000 4 TCGA:I 14762282 chr17 42960492 43201948 241457 + 0 GC AG 0 0 ,60144:1,60334:1,61559:1,62257:1,62811:1 5 5 1.000 1.000 4 TCGA:I 14762283 chr17 42960496 43201952 241457 + 0 GC AG 0 0 ,60144:1,60334:1,61559:1,62257:1,62811:1 5 5 1.000 1.000 4 TCGA:I 14762286 chr17 42960597 43181858 221262 - 0 GC AG 0 0 ,67782:1 1 1 1.000 1.000 4 TCGA:I 14762290 chr17 42960620 43367394 406775 + 0 GC AG 0 0 ,60777:1,61165:1,65946:1 3 3 1.000 1.000 4 TCGA:I 14762291 chr17 42960620 43441046 480427 + 0 GC AG 0 0 ,66464:2 1 2 2.000 2.000 4 TCGA:I 14762306 chr17 42961247 43088045 126799 - 0 GC AG 0 0 ,68632:1 1 1 1.000 1.000 4 TCGA:I 14762308 chr17 42961267 43417752 456486 + 0 GT AG 0 0 ,61804:1 1 1 1.000 1.000 4 TCGA:I 14762319 chr17 42961325 43069749 108425 - 0 AT AC 0 0 ,69417:1 1 1 1.000 1.000 4 TCGA:I 14762335 chr17 42961352 43206529 245178 - 0 GC AG aC19,cG19,cG38,gC19,gC38,kG19,kG38,mG19,mG38,rG19,rG38,sG19,sG38,vG19 0 ,69341:1,69682:1,70248:1 3 3 1.000 1.000 4 TCGA:I 14762337 chr17 42961901 43151793 189893 + 0 GC AG 0 0 ,71015:1 1 1 1.000 1.000 4 TCGA:I 14762339 chr17 42961907 43151799 189893 + 0 GT AG 0 0 ,71015:1 1 1 1.000 1.000 4 TCGA:I 14762349 chr17 42962273 43125338 163066 - 0 GC AG aC19,gC19,gC38,kG38,sG19,sG38 0 ,65920:1 1 1 1.000 1.000 4 TCGA:I 14762350 chr17 42962273 43219704 257432 - 0 GC AG aC19,gC19,gC38,kG38,sG19,sG38 0 ,64130:1 1 1 1.000 1.000 4 TCGA:I 14762351 chr17 42962273 43229686 267414 - 0 GC AG aC19,gC19,gC38,kG38,sG19,sG38 0 ,70158:1 1 1 1.000 1.000 4 TCGA:I 14762352 chr17 42962273 43380586 418314 - 0 GC AG aC19,gC19,gC38,kG38,sG19,sG38 0 ,69742:1 1 1 1.000 1.000 4 TCGA:I 14762358 chr17 42962785 43183340 220556 - 0 GC AG 0 0 ,70146:1 1 1 1.000 1.000 4 TCGA:I 14762360 chr17 42962800 43204876 242077 + 0 GT AG 0 0 ,67108:1 1 1 1.000 1.000 4 TCGA:I 14762421 chr17 42964737 43209900 245164 + 0 GT AG 0 aC19,cG19,cG38,gC19,gC38,kG19,kG38,rG19,rG38,sG19,sG38 ,60799:1 1 1 1.000 1.000 4 TCGA:I 14762425 chr17 42964773 43233296 268524 + 0 GC AG 0 0 ,70435:1 1 1 1.000 1.000 4 TCGA:I 14762426 chr17 42964773 43245178 280406 + 0 GC AG 0 0 ,64963:1 1 1 1.000 1.000 4 TCGA:I 14762446 chr17 42965045 43202109 237065 + 0 GC AG 0 0 ,65138:1 1 1 1.000 1.000 4 TCGA:I 14762449 chr17 42965167 43433139 467973 - 0 GC AG 0 0 ,62704:1,64722:1,66860:1,70921:1 4 4 1.000 1.000 4 TCGA:I 14762451 chr17 42965256 43122875 157620 - 0 GC AG 0 0 ,70969:1 1 1 1.000 1.000 4 TCGA:I 14762459 chr17 42965478 43159051 193574 + 0 AT AC 0 0 ,59989:1,60072:1,60326:1,60715:1,60825:1,61851:2,62432:1,62974:1,63007:1,63474:1,65286:1,65341:1,65774:1,66160:1,66698:1,67473:1,68122:1,68761:1,68820:1,69769:1,70435:1,70742:1 22 23 1.045 1.000 4 TCGA:I 14762461 chr17 42965539 43177010 211472 - 0 GC AG 0 0 ,67488:1 1 1 1.000 1.000 4 TCGA:I 14762468 chr17 42965756 43139647 173892 - 0 GC AG 0 0 ,65803:1,66075:1 2 2 1.000 1.000 4 TCGA:I 14762472 chr17 42965864 43228168 262305 + 0 GC AG 0 0 ,68609:1 1 1 1.000 1.000 4 TCGA:I 14762474 chr17 42965893 43072286 106394 + 0 GC AG 0 0 ,65018:1 1 1 1.000 1.000 4 TCGA:I 14762475 chr17 42965893 43425606 459714 + 0 GC AG 0 0 ,65577:1,66694:1 2 2 1.000 1.000 4 TCGA:I 14762483 chr17 42966315 43170118 203804 - 0 GC AG 0 0 ,62155:1,65452:1 2 2 1.000 1.000 4 TCGA:I 14762491 chr17 42966486 43420694 454209 + 0 GC AG 0 0 ,66669:1 1 1 1.000 1.000 4 TCGA:I 14762500 chr17 42966943 43210811 243869 + 0 GT AG 0 0 ,59838:1,62207:1,67018:1,67798:1,68064:1 5 5 1.000 1.000 4 TCGA:I 14762505 chr17 42967056 43065639 98584 - 0 GC AG 0 0 ,62862:1,70029:3,70224:1 3 5 1.667 1.000 4 TCGA:I 14762511 chr17 42967694 43408863 441170 - 0 GC AG 0 0 ,70310:1 1 1 1.000 1.000 4 TCGA:I 14762520 chr17 42967928 43108465 140538 + 0 GC AG 0 0 ,62668:1,67843:1 2 2 1.000 1.000 4 TCGA:I 14762535 chr17 42968429 43441046 472618 + 0 GC AG 0 0 ,65724:1 1 1 1.000 1.000 4 TCGA:I 14762542 chr17 42968682 43400184 431503 + 0 GC AG 0 0 ,62352:1,65319:1 2 2 1.000 1.000 4 TCGA:I 14762559 chr17 42969647 43048762 79116 - 0 GT AG 0 0 ,63797:1,64673:1,64710:1,65747:1,68502:1,69556:1 6 6 1.000 1.000 4 TCGA:I 14762560 chr17 42969647 43061829 92183 - 0 GT AG 0 0 ,59928:1,66749:1,68940:1 3 3 1.000 1.000 4 TCGA:I 14762561 chr17 42969651 43048766 79116 - 0 GC AG 0 0 ,63797:1,64673:1,64710:1,65747:1,68502:1,69556:1 6 6 1.000 1.000 4 TCGA:I 14762562 chr17 42969651 43061833 92183 - 0 GC AG 0 0 ,59928:1,66749:1,68940:1 3 3 1.000 1.000 4 TCGA:I 14762563 chr17 42969657 43061839 92183 - 0 GC AG 0 0 ,59928:1,66749:1,68940:1 3 3 1.000 1.000 4 TCGA:I 14762565 chr17 42969789 43347923 378135 + 0 GC AG 0 0 ,61205:1 1 1 1.000 1.000 4 TCGA:I 14762567 chr17 42969934 43097559 127626 - 0 GC AG 0 0 ,68197:1 1 1 1.000 1.000 4 TCGA:I 14762568 chr17 42969934 43192662 222729 - 0 GC AG 0 0 ,66215:1 1 1 1.000 1.000 4 TCGA:I 14762570 chr17 42970031 43391367 421337 + 0 GC AG 0 0 ,66430:1 1 1 1.000 1.000 4 TCGA:I 14762571 chr17 42970031 43395564 425534 + 0 GC AG 0 0 ,59926:1,60740:1,61167:1,62207:1,64234:1,64372:1,66464:3,68243:1,68344:1,68680:1 10 12 1.200 1.000 4 TCGA:I 14762572 chr17 42970100 43141784 171685 - 0 GT AG 0 0 ,63117:1,63169:1,63684:1,65492:2,65571:1,67996:1 6 7 1.167 1.000 4 TCGA:I 14762573 chr17 42970100 43393619 423520 - 0 GC AG 0 0 ,64461:1 1 1 1.000 1.000 4 TCGA:I 14762593 chr17 42970911 43085264 114354 + 0 GC AG 0 0 ,59817:1 1 1 1.000 1.000 4 TCGA:I 14762594 chr17 42970943 43222030 251088 + 0 GT AG 0 0 ,62267:1,63998:1,64034:1,64262:1,65263:1,67596:1,69794:1,70670:2 8 9 1.125 1.000 4 TCGA:I 14762599 chr17 42971658 43227603 255946 + 0 GT AG 0 0 ,68313:1 1 1 1.000 1.000 4 TCGA:I 14762648 chr17 42971930 43313264 341335 - 0 GC AG 0 0 ,63073:1 1 1 1.000 1.000 4 TCGA:I 14762650 chr17 42971975 43119185 147211 + 0 GT AG 0 0 ,62659:1 1 1 1.000 1.000 4 TCGA:I 14762656 chr17 42972124 43218596 246473 + 0 GT AG 0 0 ,60898:1 1 1 1.000 1.000 4 TCGA:I 14762682 chr17 42972988 43450975 477988 - 0 AT AC 0 0 ,59763:1,64025:1,65255:1,69675:1 4 4 1.000 1.000 4 TCGA:I 14762685 chr17 42972999 43450986 477988 - 0 GC AG 0 0 ,61314:1 1 1 1.000 1.000 4 TCGA:I 14762693 chr17 42973189 43233296 260108 + 0 GT AG 0 0 ,67279:1 1 1 1.000 1.000 4 TCGA:I 14762697 chr17 42973322 43452160 478839 + 0 GT AG 0 0 ,60235:1 1 1 1.000 1.000 4 TCGA:I 14762698 chr17 42973367 43452078 478712 + 0 GT AG 0 0 ,62058:1,62968:1,66031:1,68106:1 4 4 1.000 1.000 4 TCGA:I 14762699 chr17 42973367 43452115 478749 + 0 GT AG 0 0 ,60414:1,65597:1,67337:1 3 3 1.000 1.000 4 TCGA:I 14762700 chr17 42973367 43452467 479101 + 0 GT AG 0 0 ,68571:1 1 1 1.000 1.000 4 TCGA:I 14762704 chr17 42973562 43452759 479198 + 0 GT AG 0 0 ,63895:1,66380:1,69924:1,70589:1 4 4 1.000 1.000 4 TCGA:I 14762705 chr17 42973766 43452963 479198 - 0 AT AC 0 0 ,66961:1 1 1 1.000 1.000 4 TCGA:I 14762716 chr17 42974511 43206800 232290 + 0 AT AC 0 0 ,66525:1 1 1 1.000 1.000 4 TCGA:I 14762726 chr17 42974746 43117711 142966 - 0 GT AG 0 0 ,60895:1 1 1 1.000 1.000 4 TCGA:I 14762730 chr17 42974898 43391227 416330 + 0 GC AG 0 0 ,70847:1 1 1 1.000 1.000 4 TCGA:I 14762737 chr17 42975473 43196537 221065 + 0 GC AG 0 0 ,65859:1 1 1 1.000 1.000 4 TCGA:I 14762739 chr17 42975591 43145126 169536 + 0 GT AG 0 0 ,62973:1 1 1 1.000 1.000 4 TCGA:I 14762752 chr17 42975820 43060633 84814 + 0 GC AG 0 0 ,68300:1 1 1 1.000 1.000 4 TCGA:I 14762754 chr17 42975879 43237347 261469 - 0 AT AC 0 0 ,62025:1 1 1 1.000 1.000 4 TCGA:I 14762755 chr17 42975879 43299041 323163 - 0 AT AC 0 0 ,62519:1,62718:1 2 2 1.000 1.000 4 TCGA:I 14762758 chr17 42975888 43237356 261469 + 0 GC AG 0 0 ,62025:1 1 1 1.000 1.000 4 TCGA:I 14762759 chr17 42975888 43299050 323163 + 0 GC AG 0 0 ,62519:1,62718:1 2 2 1.000 1.000 4 TCGA:I 14762760 chr17 42975888 43421053 445166 + 0 GC AG 0 0 ,62905:1,64844:1,66653:2 3 4 1.333 1.000 4 TCGA:I 14762764 chr17 42975908 43405218 429311 - 0 GT AG 0 0 ,65253:1 1 1 1.000 1.000 4 TCGA:I 14762786 chr17 42976424 43276835 300412 + 0 GC AG 0 0 ,62850:1,70807:1 2 2 1.000 1.000 4 TCGA:I 14762789 chr17 42976625 43060432 83808 - 0 GC AG 0 0 ,66231:1,66300:3,69127:1,70176:1,70557:1 5 7 1.400 1.000 4 TCGA:I 14762790 chr17 42976629 43060436 83808 - 0 GC AG 0 0 ,66231:1,66300:3,69127:1,70176:1,70557:1 5 7 1.400 1.000 4 TCGA:I 14762791 chr17 42976635 43060442 83808 - 0 GC AG 0 0 ,66231:1,66300:3,69127:1,70176:1,70557:1 5 7 1.400 1.000 4 TCGA:I 14762792 chr17 42976658 43045081 68424 + 0 GC AG 0 0 ,63010:1 1 1 1.000 1.000 4 TCGA:I 14762807 chr17 42977060 43141861 164802 + 0 GC AG 0 0 ,66989:1 1 1 1.000 1.000 4 TCGA:I 14762816 chr17 42977098 43144827 167730 - 0 GC AG 0 0 ,62881:1,66597:1 2 2 1.000 1.000 4 TCGA:I 14762830 chr17 42977842 43120528 142687 + 0 GC AG 0 0 ,64071:1,68013:1,69436:1 3 3 1.000 1.000 4 TCGA:I 14762831 chr17 42977842 43322238 344397 + 0 GC AG 0 0 ,63698:1,64696:1,68443:1,70390:1,70736:1 5 5 1.000 1.000 4 TCGA:I 14762832 chr17 42977852 43387968 410117 + 0 GT AG 0 0 ,61616:1 1 1 1.000 1.000 4 TCGA:I 14762837 chr17 42977982 43321336 343355 + 0 GC AG 0 0 ,61995:1,69294:1,69479:1 3 3 1.000 1.000 4 TCGA:I 14762840 chr17 42978050 43375871 397822 - 0 GC AG 0 0 ,60521:1 1 1 1.000 1.000 4 TCGA:I 14762841 chr17 42978170 43405492 427323 + 0 GC AG 0 0 ,67149:1 1 1 1.000 1.000 4 TCGA:I 14762845 chr17 42978176 43405498 427323 + 0 GC AG 0 0 ,67149:1 1 1 1.000 1.000 4 TCGA:I 14762858 chr17 42979150 43193419 214270 + 0 GC AG 0 0 ,63124:1 1 1 1.000 1.000 4 TCGA:I 14762865 chr17 42979378 43217928 238551 - 0 GT AG 0 0 ,67161:1 1 1 1.000 1.000 4 TCGA:I 14762878 chr17 42979526 43219959 240434 + 0 GC AG 0 0 ,70142:1 1 1 1.000 1.000 4 TCGA:I 14762881 chr17 42979550 43236396 256847 - 0 GT AG 0 0 ,59769:1,59791:1,60297:1,60783:1,60838:1,61563:1,62104:1,62189:1,62251:1,62323:2,63356:1,63747:1,63798:1,63850:1,64501:1,64915:1,65185:4,65523:1,65681:1,65871:1,66252:1,66350:1,66977:1,67074:1,68673:1,69726:1,70683:1,70815:2 28 33 1.179 1.000 4 TCGA:I 14762882 chr17 42979600 43106913 127314 - 0 GT AG 0 0 ,70195:1 1 1 1.000 1.000 4 TCGA:I 14762898 chr17 42979664 43216066 236403 - 0 GC AG aC19,cG19,cG38,gC19,gC38,kG19,kG38,mG19,mG38,rG19,rG38,sG19,sG38,vG19 0 ,67421:1 1 1 1.000 1.000 4 TCGA:I 14762904 chr17 42979716 43145207 165492 + 0 GT AG 0 0 ,69352:1 1 1 1.000 1.000 4 TCGA:I 14762912 chr17 42979905 43199461 219557 - 0 GC AG 0 0 ,64774:2 1 2 2.000 2.000 4 TCGA:I 14762956 chr17 42980770 43212371 231602 - 0 GC AG 0 0 ,61226:1 1 1 1.000 1.000 4 TCGA:I 14762963 chr17 42980822 43400047 419226 + 0 GC AG 0 0 ,66192:1 1 1 1.000 1.000 4 TCGA:I 14762987 chr17 42980898 43186291 205394 - 0 GT AG 0 0 ,63867:1 1 1 1.000 1.000 4 TCGA:I 14763051 chr17 42981776 43122087 140312 - 0 AT AC 0 0 ,61261:1,66082:1 2 2 1.000 1.000 4 TCGA:I 14763052 chr17 42981879 43200579 218701 + 0 GT AG 0 0 ,64654:1 1 1 1.000 1.000 4 TCGA:I 14763066 chr17 42982242 43093701 111460 - 0 GC AG 0 0 ,60521:2,65442:1 2 3 1.500 1.500 4 TCGA:I 14763086 chr17 42982848 43377140 394293 + 0 AT AC 0 0 ,60344:1,61683:1,63644:1,64519:1,64978:1,66129:1,66696:1,68354:1,68548:1 9 9 1.000 1.000 4 TCGA:I 14763087 chr17 42982858 43377150 394293 + 0 AT AC 0 0 ,60344:1,61683:1,63644:1,64519:1,64978:1,66129:1,66696:1,68354:1,68548:1 9 9 1.000 1.000 4 TCGA:I 14763089 chr17 42982960 43120871 137912 - 0 GC AG 0 0 ,70887:1 1 1 1.000 1.000 4 TCGA:I 14763090 chr17 42982960 43175071 192112 - 0 GC AG 0 0 ,61529:2,61694:1,62202:1,62426:2,62461:1,62506:1,62643:1,63290:2,66517:1,66640:2,67184:1,67567:1,68007:1,68382:1,68891:1,69088:1,69486:1 17 21 1.235 1.000 4 TCGA:I 14763097 chr17 42983077 43198097 215021 + 0 GC AG 0 0 ,65087:1,66955:1,68150:1 3 3 1.000 1.000 4 TCGA:I 14763100 chr17 42983083 43198103 215021 + 0 GC AG 0 0 ,65087:1,66955:1,68150:1 3 3 1.000 1.000 4 TCGA:I 14763104 chr17 42983118 43469926 486809 + 0 GC AG 0 0 ,66866:2,70593:1 2 3 1.500 1.500 4 TCGA:I 14763107 chr17 42983204 43189715 206512 + 0 AT AC 0 0 ,65626:1,66503:1 2 2 1.000 1.000 4 TCGA:I 14763108 chr17 42983214 43399521 416308 - 0 GC AG 0 0 ,60769:1,62603:1,63921:1,66989:1,68066:1,68229:1,69511:1,69919:1 8 8 1.000 1.000 4 TCGA:I 14763116 chr17 42983459 43116447 132989 - 0 GC AG 0 0 ,66715:1 1 1 1.000 1.000 4 TCGA:I 14763132 chr17 42983584 43448050 464467 + 0 GC AG 0 0 ,60245:1,63362:2,66398:1,70779:1 4 5 1.250 1.000 4 TCGA:I 14763138 chr17 42983622 43364816 381195 - 0 GC AG 0 0 ,62304:1 1 1 1.000 1.000 4 TCGA:I 14763171 chr17 42984231 43150229 165999 - 0 GC AG 0 0 ,69855:1 1 1 1.000 1.000 4 TCGA:I 14763176 chr17 42984254 43220370 236117 + 0 GC AG 0 0 ,66857:1 1 1 1.000 1.000 4 TCGA:I 14763181 chr17 42984395 43309068 324674 - 0 GC AG 0 0 ,62032:1 1 1 1.000 1.000 4 TCGA:I 14763197 chr17 42985089 43078286 93198 - 0 AT AC 0 0 ,63050:3 1 3 3.000 3.000 4 TCGA:I 14763199 chr17 42985098 43079097 94000 + 0 GC AG 0 0 ,63050:3 1 3 3.000 3.000 4 TCGA:I 14763217 chr17 42986112 43203690 217579 - 0 AT AC 0 0 ,69772:1 1 1 1.000 1.000 4 TCGA:I 14763245 chr17 42986543 43044848 58306 + 0 GC AG 0 0 ,70771:1 1 1 1.000 1.000 4 TCGA:I 14763248 chr17 42986618 43426968 440351 - 0 GC AG 0 0 ,67043:1 1 1 1.000 1.000 4 TCGA:I 14763249 chr17 42986618 43484761 498144 - 0 GC AG 0 0 ,61674:1 1 1 1.000 1.000 4 TCGA:I 14763258 chr17 42987300 43358568 371269 + 0 GC AG 0 0 ,65864:1,70394:1 2 2 1.000 1.000 4 TCGA:I 14763276 chr17 42987357 43392715 405359 - 0 GC AG 0 0 ,67185:1 1 1 1.000 1.000 4 TCGA:I 14763289 chr17 42987415 43345619 358205 + 0 GT AG aC19,cG19,cG38,gC19,gC38,kG19,kG38,mG19,mG38,rG19,rG38,sG19,sG38 0 ,61120:2 1 2 2.000 2.000 4 TCGA:I 14763307 chr17 42988298 43130359 142062 + 0 GC AG 0 0 ,66982:1 1 1 1.000 1.000 4 TCGA:I 14763314 chr17 42988786 43119245 130460 - 0 GC AG 0 0 ,67367:1 1 1 1.000 1.000 4 TCGA:I 14763316 chr17 42988795 43191067 202273 + 0 AT AC 0 0 ,59891:1,63324:1 2 2 1.000 1.000 4 TCGA:I 14763317 chr17 42988913 43312854 323942 + 0 GT AG 0 0 ,70740:1 1 1 1.000 1.000 4 TCGA:I 14763318 chr17 42988950 43204948 215999 - 0 GC AG 0 0 ,59942:1 1 1 1.000 1.000 4 TCGA:I 14763321 chr17 42989149 43150091 160943 + 0 GT AG 0 0 ,62549:1 1 1 1.000 1.000 4 TCGA:I 14763330 chr17 42989392 43418574 429183 + 0 AT AC 0 0 ,70972:1 1 1 1.000 1.000 4 TCGA:I 14763339 chr17 42989444 43327286 337843 - 0 GC AG 0 0 ,68621:1 1 1 1.000 1.000 4 TCGA:I 14763373 chr17 42989680 43365005 375326 + 0 GC AG 0 0 ,62074:1 1 1 1.000 1.000 4 TCGA:I 14763374 chr17 42989723 43236936 247214 - 0 GC AG 0 0 ,62818:1 1 1 1.000 1.000 4 TCGA:I 14763375 chr17 42989723 43376366 386644 - 0 GC AG 0 0 ,62041:1,63333:1 2 2 1.000 1.000 4 TCGA:I 14763380 chr17 42989755 43408863 419109 - 0 GC AG 0 0 ,60428:1 1 1 1.000 1.000 4 TCGA:I 14763381 chr17 42989755 43462277 472523 - 0 GT AG 0 0 ,59839:1 1 1 1.000 1.000 4 TCGA:I 14763382 chr17 42989778 43070210 80433 + 0 GC AG 0 0 ,68376:1 1 1 1.000 1.000 4 TCGA:I 14763383 chr17 42989880 43419819 429940 - 0 GC AG 0 0 ,61334:1 1 1 1.000 1.000 4 TCGA:I 14763384 chr17 42989913 43149512 159600 + 0 GC AG 0 0 ,69912:2 1 2 2.000 2.000 4 TCGA:I 14763457 chr17 42990780 43400408 409629 - 0 GC AG 0 0 ,64484:1 1 1 1.000 1.000 4 TCGA:I 14763543 chr17 42991026 43233296 242271 + 0 GC AG 0 0 ,62695:1 1 1 1.000 1.000 4 TCGA:I 14763571 chr17 42991095 43237790 246696 - 0 GT AG 0 0 ,63287:1,69730:1 2 2 1.000 1.000 4 TCGA:I 14763582 chr17 42991114 43233750 242637 - 0 GT AG 0 0 ,67720:1 1 1 1.000 1.000 4 TCGA:I 14763615 chr17 42991206 43126426 135221 - 0 GC AG 0 0 ,60438:1 1 1 1.000 1.000 4 TCGA:I 14763617 chr17 42991209 43126429 135221 - 0 GC AG 0 0 ,65380:1 1 1 1.000 1.000 4 TCGA:I 14763644 chr17 42991260 43416606 425347 - 0 GT AG 0 0 ,61041:1,66950:1 2 2 1.000 1.000 4 TCGA:I 14763707 chr17 42991543 43358165 366623 - 0 GT AG 0 0 ,65885:1 1 1 1.000 1.000 4 TCGA:I 14763757 chr17 42991699 43360956 369258 + 0 AT AC 0 0 ,59778:1,60711:1,61274:1,62365:1,63570:1,64132:1,64628:1,64740:1,64986:1,65221:1,65442:1,65780:1,65921:1,66314:1,68245:1,68312:1,69388:1,69523:1,69612:2 19 20 1.053 1.000 4 TCGA:I 14763769 chr17 42991748 43342941 351194 - 0 AT AC 0 0 ,62606:1 1 1 1.000 1.000 4 TCGA:I 14763780 chr17 42991813 43228728 236916 + 0 GC AG 0 0 ,60043:1,60137:1,60148:1,60295:1,60393:1,60439:1,60531:1,60581:1,60595:1,60638:1,60688:1,60988:1,61142:1,61160:1,61230:1,61299:1,61374:1,61379:1,61444:1,61459:1,61597:1,61623:1,61729:1,61747:1,61789:1,62039:1,62078:1,62141:1,62260:1,62437:1,62494:2,62522:1,62613:1,62838:3,63133:1,63207:1,63216:1,63536:3,63544:2,63776:1,63831:2,63837:1,63991:3,64036:1,64042:1,64058:1,64210:1,64612:1,64647:1,64696:1,64807:1,64850:1,65021:1,65285:1,65306:1,65362:2,65516:1,65553:1,65857:1,65928:1,65958:1,66115:2,66270:3,66360:1,66483:1,66545:1,66553:1,66706:2,66830:1,67034:1,67699:1,67932:1,68260:3,68271:2,68549:1,68626:2,68754:1,68786:1,68805:2,68822:1,69121:1,69413:1,69427:1,69461:1,69725:1,69752:1,69758:1,69808:1,70062:1,70510:1,70557:1,70593:2,70596:1,70629:1,70642:1,70686:2,70741:1,70913:1,70937:2 99 121 1.222 1.000 4 TCGA:I 14763783 chr17 42991829 43228744 236916 - 0 GC AG 0 0 ,61172:1,68856:1 2 2 1.000 1.000 4 TCGA:I 14763799 chr17 42991878 43072859 80982 - 0 GT AG 0 0 ,60259:1 1 1 1.000 1.000 4 TCGA:I 14763800 chr17 42991878 43102603 110726 - 0 GC AG 0 0 ,63241:1 1 1 1.000 1.000 4 TCGA:I 14763822 chr17 42991934 43053694 61761 + 0 GC AG 0 0 ,59797:1,59832:1,59902:1,59953:1,59986:1,60005:1,60019:1,60032:1,60076:1,60087:1,60144:1,60149:1,60158:1,60160:1,60209:1,60261:1,60311:1,60321:1,60333:2,60445:1,60482:1,60522:1,60559:1,60568:1,60582:1,60606:1,60638:1,60671:1,60683:2,60686:1,60713:1,60755:2,60822:1,60946:1,60955:1,60959:1,60978:1,61035:1,61069:1,61101:1,61118:1,61165:1,61222:1,61251:2,61281:3,61292:1,61339:1,61348:1,61386:1,61428:1,61446:1,61458:1,61462:1,61464:2,61542:1,61551:2,61554:1,61570:2,61579:1,61582:1,61611:1,61623:1,61630:1,61710:1,61741:1,61771:1,61865:1,61876:1,61909:1,61928:1,62068:1,62076:2,62083:1,62175:1,62205:2,62243:1,62247:1,62252:1,62272:1,62319:1,62383:1,62402:1,62418:1,62428:1,62432:1,62434:1,62446:2,62447:1,62458:1,62529:1,62533:1,62557:1,62561:1,62582:1,62603:1,62730:1,62747:1,62754:1,62804:1,62811:1,62832:1,62879:2,62893:1,62961:1,62971:1,62980:1,63039:1,63058:1,63075:1,63076:1,63119:1,63130:1,63154:1,63156:1,63178:1,63194:1,63212:2,63218:3,63220:1,63230:1,63237:1,63238:2,63241:1,63287:1,63297:1,63310:1,63318:1,63333:1,63335:1,63365:1,63371:1,63438:1,63445:2,63457:1,63485:1,63493:1,63503:1,63672:2,63691:1,63747:1,63768:3,63794:1,63809:1,63849:1,63854:1,63871:1,63872:1,63893:1,63924:1,63969:1,64004:1,64012:1,64028:1,64082:1,64089:1,64155:1,64214:1,64262:1,64265:1,64294:1,64295:1,64302:1,64305:1,64326:1,64381:1,64404:1,64504:1,64529:1,64555:1,64557:1,64568:1,64627:1,64633:1,64650:2,64692:1,64738:1,64776:1,64787:1,64845:1,64868:1,64892:1,64921:1,64942:1,64982:2,65028:1,65046:1,65154:1,65190:1,65209:1,65231:1,65276:1,65291:2,65292:1,65313:1,65343:1,65367:1,65375:1,65383:1,65439:2,65444:1,65448:1,65518:1,65522:3,65619:1,65626:1,65630:1,65648:1,65680:1,65705:1,65730:1,65743:1,65810:1,65824:1,65835:3,65862:1,65890:1,65896:1,65902:3,65950:1,65970:2,65995:1,66015:1,66035:1,66061:1,66085:2,66092:1,66118:2,66153:1,66191:2,66247:1,66274:1,66282:1,66305:1,66332:1,66353:1,66531:1,66562:1,66566:1,66573:1,66616:1,66661:1,66682:1,66712:1,66730:1,66756:2,66794:1,66828:1,66842:1,66858:1,66859:1,66955:1,66977:1,66986:1,67048:1,67057:1,67065:1,67100:1,67107:1,67119:1,67153:1,67160:1,67194:1,67203:1,67204:1,67208:1,67210:1,67237:1,67249:1,67325:1,67342:1,67347:1,67361:1,67408:1,67431:1,67475:2,67481:2,67516:1,67578:1,67617:1,67635:1,67645:1,67671:1,67679:1,67736:1,67748:2,67801:1,67820:2,67821:1,67830:1,67853:1,67855:1,67878:1,67906:1,67918:1,67930:1,67937:2,68000:1,68018:2,68020:2,68147:1,68152:1,68208:1,68223:1,68416:1,68423:1,68472:1,68491:1,68506:1,68547:1,68550:1,68573:1,68578:1,68682:1,68706:1,68780:1,68792:1,68799:1,68894:1,68895:1,68984:1,69000:1,69005:1,69016:1,69036:1,69054:1,69145:1,69153:1,69158:1,69164:1,69184:3,69279:1,69294:1,69328:1,69343:1,69377:1,69410:3,69437:1,69443:1,69456:1,69469:1,69485:1,69507:1,69508:1,69552:1,69593:1,69604:1,69610:1,69619:1,69629:1,69644:1,69649:1,69655:1,69732:1,69744:1,69762:1,69861:2,69886:1,69907:1,69944:1,69960:2,69961:1,70057:3,70067:1,70069:1,70107:1,70129:1,70163:1,70216:1,70270:1,70290:1,70296:1,70317:1,70327:1,70428:1,70432:1,70516:1,70551:1,70568:1,70621:1,70660:1,70678:2,70683:2,70702:3,70704:1,70716:1,70736:1,70749:1,70760:1,70772:2,70826:1,70830:1,70945:1,70986:1,71009:1,71030:1,71036:1,71083:1,71094:1 398 454 1.141 1.000 4 TCGA:I 14763827 chr17 42991939 43198685 206747 + 0 GC AG 0 0 ,67090:1 1 1 1.000 1.000 4 TCGA:I 14763833 chr17 42991955 43127764 135810 - 0 GT AG 0 0 ,69467:1 1 1 1.000 1.000 4 TCGA:I 14763842 chr17 42991984 43251336 259353 + 0 GC AG 0 0 ,69657:1 1 1 1.000 1.000 4 TCGA:I 14763851 chr17 42992020 43453949 461930 - 0 GC AG 0 0 ,67956:1 1 1 1.000 1.000 4 TCGA:I 14763886 chr17 42992250 43441062 448813 - 0 AT AC 0 0 ,59980:1 1 1 1.000 1.000 4 TCGA:I 14763900 chr17 42992288 43197870 205583 + 0 GC AG 0 0 ,62712:1 1 1 1.000 1.000 4 TCGA:I 14763913 chr17 42992324 43391219 398896 + 0 AT AC 0 0 ,68176:1 1 1 1.000 1.000 4 TCGA:I 14763918 chr17 42992332 43322238 329907 + 0 GC AG 0 0 ,69902:1 1 1 1.000 1.000 4 TCGA:I 14763919 chr17 42992332 43391227 398896 + 0 GC AG 0 0 ,59889:1,60007:1,60036:1,60062:1,60162:1,60223:1,60324:1,60679:1,60817:1,60934:1,61126:1,61800:1,62012:1,62124:1,62254:1,62405:1,62500:1,62505:1,63185:1,63367:1,63784:1,63843:1,63990:1,64193:1,64218:1,64366:1,64986:1,65337:1,65746:1,66097:1,66195:1,66809:1,66890:1,66898:1,67093:1,67145:1,67160:1,67312:1,67521:1,67615:1,67619:1,67863:1,67865:1,68544:1,68869:1,69045:1,69325:1,69529:1,69543:1,69549:1,70192:1,70199:1,70302:1,70660:2,70757:1 55 56 1.018 1.000 4 TCGA:I 14763920 chr17 42992332 43473742 481411 + 0 GC AG 0 0 ,70089:1 1 1 1.000 1.000 4 TCGA:I 14763923 chr17 42992338 43391233 398896 + 0 GT AG 0 0 ,59889:1,60007:1,60036:1,60062:1,60162:1,60223:1,60324:1,60679:1,60817:1,60934:1,61126:1,61800:1,62012:1,62124:1,62254:1,62405:1,62500:1,62505:1,63185:1,63367:1,63784:1,63843:1,63990:1,64193:1,64218:1,64366:1,64986:1,65337:1,65746:1,66097:1,66195:1,66809:1,66890:1,66898:1,67093:1,67145:1,67160:1,67312:1,67521:1,67615:1,67619:1,67863:1,67865:1,68544:1,68869:1,69045:1,69325:1,69529:1,69543:1,69549:1,70192:1,70199:1,70302:1,70660:2,70757:1 55 56 1.018 1.000 4 TCGA:I 14763924 chr17 42992338 43452115 459778 + 0 GT AG 0 0 ,67228:1 1 1 1.000 1.000 4 TCGA:I 14763925 chr17 42992338 43473748 481411 + 0 GT AG 0 0 ,70089:1 1 1 1.000 1.000 4 TCGA:I 14763935 chr17 42992444 43138061 145618 - 0 GC AG 0 0 ,63434:1 1 1 1.000 1.000 4 TCGA:I 14763936 chr17 42992444 43168514 176071 - 0 GC AG 0 0 ,61856:1,68799:1 2 2 1.000 1.000 4 TCGA:I 14763937 chr17 42992444 43413781 421338 - 0 GC AG 0 0 ,70102:1 1 1 1.000 1.000 4 TCGA:I 14763946 chr17 42992499 43157925 165427 + 0 GT AG 0 0 ,69435:1 1 1 1.000 1.000 4 TCGA:I 14763971 chr17 42992807 43404457 411651 + 0 AT AC 0 0 ,62094:1 1 1 1.000 1.000 4 TCGA:I 14763992 chr17 42992944 43326974 334031 - 0 AT AC 0 0 ,62945:1 1 1 1.000 1.000 4 TCGA:I 14763993 chr17 42992964 43464593 471630 - 0 GT AG 0 0 ,64858:1 1 1 1.000 1.000 4 TCGA:I 14764062 chr17 42993386 43068547 75162 - 0 AT AC 0 0 ,64510:1 1 1 1.000 1.000 4 TCGA:I 14764114 chr17 42994213 43466250 472038 + 0 AT AC 0 0 ,66917:1 1 1 1.000 1.000 4 TCGA:I 14764118 chr17 42994637 43476563 481927 + 0 GC AG 0 0 ,68039:1,69588:1 2 2 1.000 1.000 4 TCGA:I 14764119 chr17 42994638 43476558 481921 - 0 GC AG 0 0 ,66025:1,67413:1,69522:1 3 3 1.000 1.000 4 TCGA:I 14764184 chr17 42996462 43049292 52831 - 0 GT AG 0 0 ,62823:1 1 1 1.000 1.000 4 TCGA:I 14764188 chr17 42996587 43231066 234480 + 0 GC AG 0 0 ,67904:1 1 1 1.000 1.000 4 TCGA:I 14764210 chr17 42997404 43446629 449226 - 0 GT AG 0 0 ,70169:1 1 1 1.000 1.000 4 TCGA:I 14764311 chr17 42998725 43106495 107771 + 0 GC AG 0 0 ,62939:1 1 1 1.000 1.000 4 TCGA:I 14764326 chr17 42998770 43377426 378657 - 0 GT AG 0 0 ,62436:1,65792:1,69900:1,70276:1 4 4 1.000 1.000 4 TCGA:I 14764327 chr17 42998770 43498129 499360 - 0 GT AG 0 0 ,59828:1,60012:1,60104:1,61163:1,61172:1,61836:1,62010:1,62507:1,62711:1,62976:1,63056:1,63440:1,63536:1,63795:2,63917:1,64014:1,64667:1,64836:1,64865:1,65091:1,65274:1,65311:1,65681:1,67129:1,67260:1,67443:1,67455:1,67892:1,68110:1,68494:1,68890:1,69093:1,69161:1,69449:1,69518:1,69602:1,69668:1,69805:1,69861:1,70473:1 40 41 1.025 1.000 4 TCGA:I 14764330 chr17 42998778 43349219 350442 + 0 GT AG 0 0 ,68479:1 1 1 1.000 1.000 4 TCGA:I 14764331 chr17 42998778 43377434 378657 + 0 GT AG 0 0 ,62436:1,65792:1,69900:1,70276:1 4 4 1.000 1.000 4 TCGA:I 14764332 chr17 42998778 43498137 499360 + 0 GT AG 0 0 ,59828:1,60012:1,60104:1,61163:1,61172:1,61836:1,62010:1,62507:1,62711:1,62976:1,63056:1,63440:1,63536:1,63795:2,63917:1,64014:1,64667:1,64836:1,64865:1,65091:1,65274:1,65311:1,65681:1,67129:1,67260:1,67443:1,67455:1,67892:1,68110:1,68494:1,68890:1,69093:1,69161:1,69449:1,69518:1,69602:1,69668:1,69805:1,69861:1,70473:1 40 41 1.025 1.000 4 TCGA:I 14764344 chr17 42998800 43232798 233999 + 0 GC AG 0 0 ,70402:1 1 1 1.000 1.000 4 TCGA:I 14764362 chr17 42998818 43337317 338500 - 0 GT AG 0 0 ,61186:1,65529:1,70964:1 3 3 1.000 1.000 4 TCGA:I 14764374 chr17 42998820 43090039 91220 - 0 AT AC 0 0 ,68801:1 1 1 1.000 1.000 4 TCGA:I 14764375 chr17 42998820 43186191 187372 - 0 AT AC 0 0 ,62945:1 1 1 1.000 1.000 4 TCGA:I 14764376 chr17 42998820 43377766 378947 + 0 GT AG 0 0 ,64747:1 1 1 1.000 1.000 4 TCGA:I 14764377 chr17 42998820 43390521 391702 - 0 AT AC 0 0 ,63229:1 1 1 1.000 1.000 4 TCGA:I 14764434 chr17 42998832 43101084 102253 + 0 GT AG aC19,cG19,cG38,gC19,gC38,kG19,kG38,mG19,mG38,rG19,rG38,sG38 0 ,63421:1 1 1 1.000 1.000 4 TCGA:I 14764435 chr17 42998832 43196480 197649 + 0 GT AG aC19,cG19,cG38,gC19,gC38,kG19,kG38,mG19,mG38,rG19,rG38,sG38 aC19,cG19,cG38,gC19,gC38,kG19,kG38,mG19,mG38,rG19,rG38,sG19,sG38 ,63922:1,64099:1,64712:1,65180:1,65238:2,65323:1,65843:1,65972:1,67198:1,67357:1,67541:1,67713:1,68300:1,68640:1,70142:1,70769:1,70864:2 17 19 1.118 1.000 4 TCGA:I 14764436 chr17 42998832 43202654 203823 + 0 GT AG aC19,cG19,cG38,gC19,gC38,kG19,kG38,mG19,mG38,rG19,rG38,sG38 aC19,cG19,cG38,gC19,gC38,kG19,kG38,mG19,mG38,rG19,rG38,sG19,sG38 ,69344:1 1 1 1.000 1.000 4 TCGA:I 14764437 chr17 42998832 43203680 204849 + 0 GT AG aC19,cG19,cG38,gC19,gC38,kG19,kG38,mG19,mG38,rG19,rG38,sG38 aC19,cG19,cG38,gC19,gC38,kG19,kG38,mG19,mG38,rG19,rG38,sG19,sG38 ,63811:5,64905:1,65474:1,66810:3,67932:1,68202:1,69209:1,69280:1,70373:1 9 15 1.667 1.000 4 TCGA:I 14764438 chr17 42998832 43209900 211069 + 0 GT AG aC19,cG19,cG38,gC19,gC38,kG19,kG38,mG19,mG38,rG19,rG38,sG38 aC19,cG19,cG38,gC19,gC38,kG19,kG38,rG19,rG38,sG19,sG38 ,59956:1,62487:1,63528:2,63942:1,67223:2 5 7 1.400 1.000 4 TCGA:I 14764439 chr17 42998832 43492182 493351 + 0 GT AG aC19,cG19,cG38,gC19,gC38,kG19,kG38,mG19,mG38,rG19,rG38,sG38 aC19,cG19,cG38,gC19,gC38,kG19,kG38,mG19,mG38,rG19,rG38,sG19,sG38 ,67396:1 1 1 1.000 1.000 4 TCGA:I 14764447 chr17 42998886 43245178 246293 + 0 GC AG 0 0 ,65659:1,67331:1 2 2 1.000 1.000 4 TCGA:I 14764453 chr17 42998913 43128984 130072 + 0 GC AG aC19,gC19,gC38,kG38,sG19,sG38 0 ,62064:1 1 1 1.000 1.000 4 TCGA:I 14764454 chr17 42998915 43128986 130072 - 0 GC AG 0 0 ,62064:1 1 1 1.000 1.000 4 TCGA:I 14764490 chr17 42999112 43206147 207036 + 0 GT AG 0 0 ,60614:1 1 1 1.000 1.000 4 TCGA:I 14764507 chr17 42999232 43150191 150960 - 0 GC AG 0 0 ,66152:1 1 1 1.000 1.000 4 TCGA:I 14764509 chr17 42999238 43087974 88737 - 0 GT AG 0 0 ,61751:1 1 1 1.000 1.000 4 TCGA:I 14764517 chr17 42999293 43390251 390959 + 0 GT AG 0 0 ,60742:1,61060:1,61283:1,61354:1,62397:1,62495:1,62996:1,63423:1,63728:1,63832:1,64477:1,65045:1,65094:1,65230:1,65831:1,66577:1,66765:1,67239:1,67253:1,68010:1,68039:1,68114:1,69479:1,69518:1,69898:1,70225:1,70259:1,70496:1 28 28 1.000 1.000 4 TCGA:I 14764521 chr17 42999349 43360175 360827 + 0 GT AG 0 0 ,62874:1,65202:1,66692:1,70846:2 4 5 1.250 1.000 4 TCGA:I 14764583 chr17 42999955 43267300 267346 + 0 AT AC 0 0 ,64752:2 1 2 2.000 2.000 4 TCGA:I 14764605 chr17 42999978 43396823 396846 + 0 GT AG 0 0 ,66292:1 1 1 1.000 1.000 4 TCGA:I 14764608 chr17 42999982 43330745 330764 - 0 GT AG 0 0 ,69235:1 1 1 1.000 1.000 4 TCGA:I 14764629 chr17 43000003 43323200 323198 + 0 GC AG 0 0 ,68362:1 1 1 1.000 1.000 4 TCGA:I 14764663 chr17 43000015 43468106 468092 - 0 GC AG 0 0 ,60556:1 1 1 1.000 1.000 4 TCGA:I 14764683 chr17 43000035 43151186 151152 + 0 AT AC 0 0 ,63055:1 1 1 1.000 1.000 4 TCGA:I 14764695 chr17 43000038 43145003 144966 + 0 GC AG 0 0 ,63583:4 1 4 4.000 4.000 4 TCGA:I 14764696 chr17 43000038 43476569 476532 + 0 GC AG 0 0 ,62509:1,65930:1,68154:1 3 3 1.000 1.000 4 TCGA:I 14764703 chr17 43000046 43059767 59722 + 0 AT AC 0 0 ,69116:1 1 1 1.000 1.000 4 TCGA:I 14764712 chr17 43000053 43411992 411940 + 0 AT AC 0 0 ,67369:1,69237:1,70790:1 3 3 1.000 1.000 4 TCGA:I 14764740 chr17 43000065 43351189 351125 - 0 AT AC 0 0 ,65178:1 1 1 1.000 1.000 4 TCGA:I 14764797 chr17 43000089 43476487 476399 - 0 GC AG 0 0 ,67879:1 1 1 1.000 1.000 4 TCGA:I 14764838 chr17 43000103 43047120 47018 + 0 GT AG aC19,cG19,cG38,gC19,gC38,kG19,kG38,mG19,mG38,rG19,rG38,sG19,sG38 0 ,64737:1 1 1 1.000 1.000 4 TCGA:I 14764839 chr17 43000103 43153376 153274 + 0 GT AG aC19,cG19,cG38,gC19,gC38,kG19,kG38,mG19,mG38,rG19,rG38,sG19,sG38 0 ,67466:1,70964:1 2 2 1.000 1.000 4 TCGA:I 14764840 chr17 43000103 43193093 192991 + 0 GT AG aC19,cG19,cG38,gC19,gC38,kG19,kG38,mG19,mG38,rG19,rG38,sG19,sG38 aC19,cG19,cG38,gC19,gC38,kG19,kG38,mG19,mG38,rG19,rG38,sG19,sG38 ,60118:1 1 1 1.000 1.000 4 TCGA:I 14764841 chr17 43000103 43201685 201583 + 0 GT AG aC19,cG19,cG38,gC19,gC38,kG19,kG38,mG19,mG38,rG19,rG38,sG19,sG38 aC19,cG19,cG38,gC19,gC38,kG19,kG38,mG19,mG38,rG19,rG38,sG19,sG38 ,61316:1,65816:1,69514:1 3 3 1.000 1.000 4 TCGA:I 14764842 chr17 43000103 43209900 209798 + 0 GT AG aC19,cG19,cG38,gC19,gC38,kG19,kG38,mG19,mG38,rG19,rG38,sG19,sG38 aC19,cG19,cG38,gC19,gC38,kG19,kG38,rG19,rG38,sG19,sG38 ,60709:1,62393:1,62470:1,64297:1,64510:1,65639:1,67453:1,68114:1,71008:1 9 9 1.000 1.000 4 TCGA:I 14764843 chr17 43000103 43212394 212292 + 0 GT AG aC19,cG19,cG38,gC19,gC38,kG19,kG38,mG19,mG38,rG19,rG38,sG19,sG38 0 ,65264:1 1 1 1.000 1.000 4 TCGA:I 14764857 chr17 43000451 43344770 344320 + 0 AT AC 0 0 ,61839:1 1 1 1.000 1.000 4 TCGA:I 14764863 chr17 43000513 43316271 315759 + 0 GT AG 0 0 ,68580:1,69972:1 2 2 1.000 1.000 4 TCGA:I 14764864 chr17 43000513 43350328 349816 + 0 GT AG 0 0 ,64183:1,69772:1 2 2 1.000 1.000 4 TCGA:I 14764874 chr17 43000552 43422206 421655 - 0 GC AG 0 0 ,61275:1 1 1 1.000 1.000 4 TCGA:I 14764881 chr17 43000558 43422212 421655 - 0 GC AG 0 0 ,61275:1 1 1 1.000 1.000 4 TCGA:I 14764898 chr17 43000774 43190970 190197 + 0 GC AG 0 0 ,63249:1 1 1 1.000 1.000 4 TCGA:I 14764920 chr17 43001063 43307858 306796 + 0 GC AG 0 0 ,62991:1,67140:1,69131:1,69716:1,70398:1 5 5 1.000 1.000 4 TCGA:I 14764931 chr17 43001084 43078939 77856 - 0 GC AG 0 0 ,60980:1,65377:1,66157:1,67125:1,68596:1,68938:1,69430:2,70820:1 8 9 1.125 1.000 4 TCGA:I 14764934 chr17 43001129 43174880 173752 + 0 GT AG 0 0 ,62346:1 1 1 1.000 1.000 4 TCGA:I 14764935 chr17 43001167 43198885 197719 - 0 GT AG 0 0 ,62811:1,63222:2,65043:1,66060:2,68833:1 5 7 1.400 1.000 4 TCGA:I 14764941 chr17 43001174 43198892 197719 + 0 GT AG 0 0 ,62811:1,63222:2,65043:1,66060:2,68833:1 5 7 1.400 1.000 4 TCGA:I 14764958 chr17 43001452 43214176 212725 - 0 GT AG 0 0 ,64056:1 1 1 1.000 1.000 4 TCGA:I 14764959 chr17 43001452 43490698 489247 - 0 GT AG 0 0 ,61602:1,65363:1 2 2 1.000 1.000 4 TCGA:I 14764963 chr17 43001492 43321303 319812 + 0 GC AG 0 0 ,61444:1,62296:1,66995:1,68978:1 4 4 1.000 1.000 4 TCGA:I 14764964 chr17 43001496 43321307 319812 + 0 AT AC 0 0 ,61444:1,62296:1,66995:1,68978:1 4 4 1.000 1.000 4 TCGA:I 14764965 chr17 43001498 43321309 319812 - 0 AT AC 0 0 ,61444:1,62296:1,66995:1,68978:1 4 4 1.000 1.000 4 TCGA:I 14764970 chr17 43001519 43321330 319812 + 0 GC AG 0 0 ,62296:1,63944:1,68144:1 3 3 1.000 1.000 4 TCGA:I 14764979 chr17 43001557 43106054 104498 + 0 GC AG 0 0 ,64737:1 1 1 1.000 1.000 4 TCGA:I 14764982 chr17 43001691 43200453 198763 + 0 GC AG 0 0 ,61215:1 1 1 1.000 1.000 4 TCGA:I 14765018 chr17 43002109 43349703 347595 - 0 GC AG 0 0 ,63445:1 1 1 1.000 1.000 4 TCGA:I 14765019 chr17 43002109 43360396 358288 - 0 GC AG 0 0 ,63208:1 1 1 1.000 1.000 4 TCGA:I 14765039 chr17 43002382 43195695 193314 - 0 GT AG 0 0 ,63105:1,63324:1,63881:2,65445:1,65483:1,66657:1,67265:1,68672:1,69320:1,69795:1,69879:1 11 12 1.091 1.000 4 TCGA:I 14765050 chr17 43002480 43486163 483684 - 0 GC AG 0 0 ,61711:1,63380:1,71066:1 3 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43002784 43372537 369754 + 0 GT AG aC19,cG19,cG38,gC19,gC38,kG19,kG38,mG19,mG38,rG19,rG38,sG19,sG38 0 ,60292:1,64038:1,65835:1,68391:1 4 4 1.000 1.000 4 TCGA:I 14765199 chr17 43002784 43381660 378877 - 0 AT AC aC19,cG19,cG38,gC19,gC38,kG19,kG38,mG19,mG38,rG19,rG38,sG19,sG38 0 ,67135:1 1 1 1.000 1.000 4 TCGA:I 14765200 chr17 43002784 43383621 380838 + 0 GT AG aC19,cG19,cG38,gC19,gC38,kG19,kG38,mG19,mG38,rG19,rG38,sG19,sG38 0 ,60379:1 1 1 1.000 1.000 4 TCGA:I 14765223 chr17 43002896 43159997 157102 + 0 GT AG 0 0 ,63188:1 1 1 1.000 1.000 4 TCGA:I 14765224 chr17 43002909 43435015 432107 - 0 GT AG 0 0 ,65626:1 1 1 1.000 1.000 4 TCGA:I 14765226 chr17 43002924 43404933 402010 - 0 GC AG 0 0 ,66680:1 1 1 1.000 1.000 4 TCGA:I 14765227 chr17 43002937 43405416 402480 + 0 AT AC 0 0 ,60316:1 1 1 1.000 1.000 4 TCGA:I 14765229 chr17 43002947 43114825 111879 + 0 AT AC 0 0 ,62257:1 1 1 1.000 1.000 4 TCGA:I 14765240 chr17 43003117 43144836 141720 + 0 AT AC 0 0 ,63706:1 1 1 1.000 1.000 4 TCGA:I 14765242 chr17 43003239 43391706 388468 + 0 GT AG 0 0 ,65918:1 1 1 1.000 1.000 4 TCGA:I 14765243 chr17 43003365 43074415 71051 - 0 GT AG 0 0 ,63162:1 1 1 1.000 1.000 4 TCGA:I 14765245 chr17 43003462 43220173 216712 - 0 GT AG 0 0 ,61271:2 1 2 2.000 2.000 4 TCGA:I 14765247 chr17 43003669 43210304 206636 + 0 GT AG 0 0 ,60066:1,65742:1 2 2 1.000 1.000 4 TCGA:I 14765251 chr17 43004138 43404933 400796 - 0 GC AG 0 0 ,70765:1 1 1 1.000 1.000 4 TCGA:I 14765255 chr17 43004415 43133049 128635 + 0 GC AG 0 0 ,62933:1 1 1 1.000 1.000 4 TCGA:I 14765256 chr17 43004415 43149512 145098 + 0 GC AG 0 0 ,61036:1,61491:1 2 2 1.000 1.000 4 TCGA:I 14765257 chr17 43004415 43169444 165030 + 0 GC AG 0 0 ,65439:1,68732:1,70562:1 3 3 1.000 1.000 4 TCGA:I 14765258 chr17 43004489 43200427 195939 + 0 GT AG 0 0 ,66132:1 1 1 1.000 1.000 4 TCGA:I 14765259 chr17 43004549 43048316 43768 - 0 GC AG 0 0 ,63768:1,70707:2 2 3 1.500 1.500 4 TCGA:I 14765261 chr17 43004607 43182389 177783 - 0 AT AC 0 0 ,68841:1 1 1 1.000 1.000 4 TCGA:I 14765267 chr17 43005239 43060019 54781 - 0 GC AG 0 0 ,66999:1 1 1 1.000 1.000 4 TCGA:I 14765268 chr17 43005239 43169292 164054 - 0 GC AG 0 0 ,68841:2 1 2 2.000 2.000 4 TCGA:I 14765269 chr17 43005239 43172939 167701 - 0 GC AG 0 0 ,65989:1 1 1 1.000 1.000 4 TCGA:I 14765271 chr17 43005245 43118496 113252 - 0 GC AG 0 0 ,69618:1 1 1 1.000 1.000 4 TCGA:I 14765272 chr17 43005245 43169298 164054 - 0 GC AG 0 0 ,68841:2 1 2 2.000 2.000 4 TCGA:I 14765273 chr17 43005245 43172945 167701 - 0 GC AG 0 0 ,65989:1 1 1 1.000 1.000 4 TCGA:I 14765274 chr17 43005245 43237570 232326 - 0 GC AG 0 0 ,59837:1,60204:1,60246:1,63222:1,63991:1,68323:1,68561:1,69706:1 8 8 1.000 1.000 4 TCGA:I 14765275 chr17 43005245 43305570 300326 - 0 GC AG 0 0 ,63485:2 1 2 2.000 2.000 4 TCGA:I 14765276 chr17 43005245 43466677 461433 - 0 GC AG 0 0 ,66172:1 1 1 1.000 1.000 4 TCGA:I 14765277 chr17 43005245 43481305 476061 - 0 GC AG 0 0 ,68833:1 1 1 1.000 1.000 4 TCGA:I 14765278 chr17 43005245 43484761 479517 - 0 GC AG 0 0 ,69011:1 1 1 1.000 1.000 4 TCGA:I 14765285 chr17 43005478 43207572 202095 + 0 GC AG 0 0 ,69850:1 1 1 1.000 1.000 4 TCGA:I 14765288 chr17 43005723 43320767 315045 - 0 GC AG 0 0 ,65804:1 1 1 1.000 1.000 4 TCGA:I 14765304 chr17 43006313 43222708 216396 - 0 GC AG 0 0 ,61678:1 1 1 1.000 1.000 4 TCGA:I 14765305 chr17 43006344 43398280 391937 - 0 GC AG 0 0 ,65337:1,70899:1 2 2 1.000 1.000 4 TCGA:I 14765307 chr17 43006473 43498424 491952 + 0 GT AG 0 0 ,62019:1 1 1 1.000 1.000 4 TCGA:I 14765317 chr17 43006783 43193240 186458 + 0 GC AG 0 0 ,65220:1 1 1 1.000 1.000 4 TCGA:I 14765403 chr17 43006918 43063503 56586 - 0 GC AG 0 0 ,61684:1,62529:1 2 2 1.000 1.000 4 TCGA:I 14765416 chr17 43006950 43393341 386392 - 0 AT AC 0 0 ,67881:1 1 1 1.000 1.000 4 TCGA:I 14765448 chr17 43006969 43186249 179281 + 0 GT AG aC19,cG19,cG38,gC19,gC38,kG19,kG38,mG19,mG38,rG19,rG38,sG19,sG38 aC19,cG19,cG38,gC19,gC38,kG19,kG38,mG19,mG38,rG19,rG38,sG19,sG38 ,68956:1 1 1 1.000 1.000 4 TCGA:I 14765455 chr17 43007194 43134745 127552 - 0 GT AG 0 0 ,61453:1 1 1 1.000 1.000 4 TCGA:I 14765457 chr17 43007312 43068523 61212 - 0 GC AG 0 0 ,65925:1 1 1 1.000 1.000 4 TCGA:I 14765466 chr17 43007589 43428169 420581 + 0 GC AG 0 0 ,66496:1,69210:1 2 2 1.000 1.000 4 TCGA:I 14765470 chr17 43007595 43049643 42049 + 0 GC AG 0 0 ,62138:1,64907:1,69645:1 3 3 1.000 1.000 4 TCGA:I 14765471 chr17 43007595 43053738 46144 + 0 GC AG 0 0 ,61792:1 1 1 1.000 1.000 4 TCGA:I 14765472 chr17 43007595 43205781 198187 + 0 GC AG 0 0 ,67509:1 1 1 1.000 1.000 4 TCGA:I 14765473 chr17 43007595 43391099 383505 + 0 GC AG 0 0 ,60117:1,61990:1,62487:2,62588:1,62757:1,65379:1,66756:1,68759:1,70045:1 9 10 1.111 1.000 4 TCGA:I 14765474 chr17 43007595 43428175 420581 + 0 GC AG 0 0 ,66496:1,69210:1 2 2 1.000 1.000 4 TCGA:I 14765482 chr17 43008194 43146467 138274 - 0 GC AG 0 0 ,60465:1 1 1 1.000 1.000 4 TCGA:I 14765484 chr17 43008267 43167733 159467 - 0 GT AG 0 0 ,64648:1 1 1 1.000 1.000 4 TCGA:I 14765486 chr17 43008289 43183586 175298 - 0 GT AG 0 0 ,64878:1 1 1 1.000 1.000 4 TCGA:I 14765512 chr17 43008910 43362585 353676 - 0 GC AG 0 0 ,60404:1 1 1 1.000 1.000 4 TCGA:I 14765516 chr17 43009041 43131828 122788 + 0 GC AG 0 0 ,60344:1,60924:1,62752:2,63528:1,70545:1 5 6 1.200 1.000 4 TCGA:I 14765534 chr17 43009244 43060432 51189 - 0 GC AG 0 0 ,70010:1 1 1 1.000 1.000 4 TCGA:I 14765535 chr17 43009244 43231787 222544 - 0 GC AG 0 0 ,70654:1 1 1 1.000 1.000 4 TCGA:I 14765551 chr17 43009737 43309181 299445 + 0 GC AG 0 0 ,59995:1 1 1 1.000 1.000 4 TCGA:I 14765556 chr17 43009863 43230308 220446 + 0 GT AG 0 0 ,60413:1,61358:1 2 2 1.000 1.000 4 TCGA:I 14765558 chr17 43009955 43137905 127951 + 0 GC AG 0 0 ,66066:2 1 2 2.000 2.000 4 TCGA:I 14765566 chr17 43010492 43492857 482366 + 0 GC AG 0 0 ,61502:1,62371:1 2 2 1.000 1.000 4 TCGA:I 14765599 chr17 43011455 43218596 207142 + 0 GC AG 0 0 ,64166:1 1 1 1.000 1.000 4 TCGA:I 14765607 chr17 43011838 43164601 152764 + 0 GC AG 0 0 ,63464:2 1 2 2.000 2.000 4 TCGA:I 14765635 chr17 43012223 43109583 97361 + 0 GC AG 0 0 ,62558:1 1 1 1.000 1.000 4 TCGA:I 14765636 chr17 43012223 43384176 371954 + 0 GC AG 0 0 ,60246:1,60443:1,60685:1,61053:1,61114:1,61354:1,61382:1,61465:1,61510:1,61521:1,62310:1,62725:1,62773:1,62804:1,62828:1,62968:1,63092:1,63333:1,63608:1,64297:1,65225:1,65542:1,65639:1,65657:1,66015:1,66120:1,66927:1,67208:1,67369:1,68418:1,68466:1,68890:1,69663:1,69873:1 34 34 1.000 1.000 4 TCGA:I 14765639 chr17 43012224 43330457 318234 - 0 GT AG 0 0 ,66256:1 1 1 1.000 1.000 4 TCGA:I 14765645 chr17 43012233 43217184 204952 - 0 GT AG 0 0 ,60668:1,61100:1,68520:1,71069:1 4 4 1.000 1.000 4 TCGA:I 14765647 chr17 43012238 43055122 42885 + 0 GC AG 0 0 ,60167:1,62682:1,67986:1 3 3 1.000 1.000 4 TCGA:I 14765679 chr17 43012278 43071046 58769 + 0 GT AG aC19,cG19,cG38,gC19,gC38,kG19,kG38,mG19,mG38,rG19,rG38,sG19,sG38 0 ,63892:1 1 1 1.000 1.000 4 TCGA:I 14765680 chr17 43012278 43175790 163513 + 0 GT AG aC19,cG19,cG38,gC19,gC38,kG19,kG38,mG19,mG38,rG19,rG38,sG19,sG38 aC19,gC19,gC38,kG19,kG38,mG19,mG38,rG19,rG38,sG19,sG38 ,63836:1 1 1 1.000 1.000 4 TCGA:I 14765681 chr17 43012278 43190608 178331 + 0 GT AG aC19,cG19,cG38,gC19,gC38,kG19,kG38,mG19,mG38,rG19,rG38,sG19,sG38 aC19,cG19,cG38,gC19,gC38,kG19,kG38,mG19,mG38,rG19,rG38,sG19,sG38 ,65587:1 1 1 1.000 1.000 4 TCGA:I 14765682 chr17 43012278 43209900 197623 + 0 GT AG aC19,cG19,cG38,gC19,gC38,kG19,kG38,mG19,mG38,rG19,rG38,sG19,sG38 aC19,cG19,cG38,gC19,gC38,kG19,kG38,rG19,rG38,sG19,sG38 ,70650:1 1 1 1.000 1.000 4 TCGA:I 14765683 chr17 43012278 43373394 361117 + 0 GT AG aC19,cG19,cG38,gC19,gC38,kG19,kG38,mG19,mG38,rG19,rG38,sG19,sG38 0 ,65310:1 1 1 1.000 1.000 4 TCGA:I 14765684 chr17 43012278 43400988 388711 - 0 AT AC aC19,cG19,cG38,gC19,gC38,kG19,kG38,mG19,mG38,rG19,rG38,sG19,sG38 0 ,68493:1 1 1 1.000 1.000 4 TCGA:I 14765685 chr17 43012278 43418794 406517 + 0 GT AG aC19,cG19,cG38,gC19,gC38,kG19,kG38,mG19,mG38,rG19,rG38,sG19,sG38 0 ,68427:1 1 1 1.000 1.000 4 TCGA:I 14765686 chr17 43012278 43507893 495616 + 0 GT AG aC19,cG19,cG38,gC19,gC38,kG19,kG38,mG19,mG38,rG19,rG38,sG19,sG38 0 ,61273:1,61570:1,63517:1,63664:1,67554:1,68079:1,68108:1,68614:1,68900:1,69873:1,69994:1,70603:1,70762:1 13 13 1.000 1.000 4 TCGA:I 14765708 chr17 43012545 43201117 188573 - 0 GC AG 0 0 ,69370:1 1 1 1.000 1.000 4 TCGA:I 14765710 chr17 43012658 43222017 209360 - 0 GT AG 0 0 ,60908:1,63807:1,63850:1,64028:1,64688:1,65768:1,67407:1,67616:1,68959:1,69491:1,69736:1,70058:1 12 12 1.000 1.000 4 TCGA:I 14765786 chr17 43013125 43381483 368359 + 0 GT AG 0 0 ,60571:1 1 1 1.000 1.000 4 TCGA:I 14765828 chr17 43013195 43306686 293492 + 0 GT AG aC19,cG19,cG38,gC19,gC38,kG19,kG38,mG19,mG38,rG19,rG38,sG19,sG38 0 ,59762:1,60016:1,60022:1,60060:1,60120:1,60230:1,60358:1,60388:1,60451:1,60489:1,60564:1,60584:1,60587:1,60668:1,60800:1,60822:1,60866:1,60925:1,61171:1,61182:1,61210:1,61237:1,61288:1,61312:1,61337:1,61373:1,61545:1,61714:1,61785:1,61799:2,61844:1,61923:1,62023:1,62060:1,62175:1,62200:1,62251:1,62262:2,62332:1,62505:1,62507:1,62509:1,62552:1,62556:1,62560:1,62684:1,62728:1,62736:1,62836:1,62840:1,62913:1,63026:1,63056:1,63117:1,63146:1,63502:1,63530:1,63580:1,63610:1,63629:1,63876:2,63888:1,63992:1,64016:1,64026:1,64073:1,64201:1,64214:1,64309:1,64399:1,64510:2,64516:1,64537:1,64639:1,64879:1,65041:1,65062:1,65134:1,65173:1,65435:1,65512:1,65549:1,65559:1,65719:1,65908:1,65994:1,66181:1,66241:1,66289:1,66420:1,66428:2,66630:1,66705:1,66830:1,66875:1,66897:1,67178:1,67677:1,67723:1,67727:1,67790:1,67915:1,67957:1,67963:1,68153:1,68171:1,68222:1,68352:1,68512:1,68540:1,68588:1,68673:1,68775:1,68786:1,68794:1,68909:1,69005:1,69132:1,69156:1,69297:1,69313:1,69316:1,69369:1,69416:1,69491:1,69655:1,69683:1,69705:1,69739:1,69744:1,69849:1,69862:1,70010:1,70063:1,70263:1,70356:1,70381:1,70461:1,70485:3,70611:1,70699:1,70728:1,70746:1,70752:1,70911:1,70924:1,70925:1,71023:1 148 155 1.047 1.000 4 TCGA:I 14765829 chr17 43013195 43455589 442395 + 0 GT AG aC19,cG19,cG38,gC19,gC38,kG19,kG38,mG19,mG38,rG19,rG38,sG19,sG38 0 ,60561:1,60715:1,61237:1,61903:2,62061:1,62255:1,62390:1,62425:1,62666:1,62732:1,62745:1,62813:1,62969:1,62979:1,63409:1,63479:2,64020:1,64841:1,64865:1,65202:1,65282:1,65821:1,65871:1,66047:1,66447:1,66546:1,66819:1,67068:1,67076:1,67143:1,67177:1,67237:1,67276:1,67279:1,67569:1,67636:1,67887:1,68592:1,68687:1,68845:1,68881:1,68950:1,69132:1,69453:1,69683:1,69918:1,70185:1,70217:1,70407:1,70517:1,70770:1,70786:1,70816:1,71071:1 54 56 1.037 1.000 4 TCGA:I 14765832 chr17 43013224 43452115 438892 + 0 GT AG 0 0 ,61728:1,63849:1,66586:1 3 3 1.000 1.000 4 TCGA:I 14765853 chr17 43013308 43157812 144505 + 0 AT AC 0 0 ,62746:1 1 1 1.000 1.000 4 TCGA:I 14765905 chr17 43013374 43372605 359232 + 0 GT AG aC19,gC19,gC38,kG38,sG38 0 ,63024:1,66269:1 2 2 1.000 1.000 4 TCGA:I 14765940 chr17 43013513 43233795 220283 - 0 GC AG 0 0 ,60713:2 1 2 2.000 2.000 4 TCGA:I 14765955 chr17 43013535 43403036 389502 + 0 GC AG 0 0 ,70389:1 1 1 1.000 1.000 4 TCGA:I 14765956 chr17 43013535 43476547 463013 + 0 GC AG 0 0 ,67049:1 1 1 1.000 1.000 4 TCGA:I 14766049 chr17 43013663 43501267 487605 + 0 GT AG aC19,cG19,cG38,gC19,gC38,kG19,kG38,mG19,mG38,rG19,rG38,sG19,sG38 0 ,60671:1 1 1 1.000 1.000 4 TCGA:I 14766153 chr17 43013932 43218823 204892 - 0 GC AG 0 0 ,67110:1 1 1 1.000 1.000 4 TCGA:I 14766228 chr17 43014223 43233296 219074 + 0 GC AG 0 0 ,63334:1 1 1 1.000 1.000 4 TCGA:I 14766229 chr17 43014223 43245178 230956 + 0 GC AG 0 0 ,61476:1 1 1 1.000 1.000 4 TCGA:I 14766237 chr17 43014231 43231453 217223 + 0 GT AG 0 0 ,63619:1 1 1 1.000 1.000 4 TCGA:I 14766238 chr17 43014231 43234476 220246 + 0 GT AG 0 0 ,61597:1,61659:1 2 2 1.000 1.000 4 TCGA:I 14766254 chr17 43014270 43347008 332739 - 0 GC AG 0 0 ,66738:1 1 1 1.000 1.000 4 TCGA:I 14766277 chr17 43014304 43402640 388337 - 0 GC AG 0 0 ,61829:1 1 1 1.000 1.000 4 TCGA:I 14766281 chr17 43014309 43193175 178867 - 0 GT AG 0 0 ,65664:1 1 1 1.000 1.000 4 TCGA:I 14766293 chr17 43014338 43476563 462226 + 0 GT AG 0 0 ,64463:1 1 1 1.000 1.000 4 TCGA:I 14766326 chr17 43014424 43106627 92204 - 0 GT AG 0 0 ,63383:1 1 1 1.000 1.000 4 TCGA:I 14766329 chr17 43014447 43074652 60206 - 0 GC AG 0 0 ,62442:1,62646:1,63312:1,63749:1,69755:1 5 5 1.000 1.000 4 TCGA:I 14766330 chr17 43014447 43194420 179974 - 0 GC AG 0 0 ,63738:1 1 1 1.000 1.000 4 TCGA:I 14766331 chr17 43014447 43216850 202404 - 0 GC AG 0 0 ,60559:2 1 2 2.000 2.000 4 TCGA:I 14766339 chr17 43014513 43245178 230666 + 0 GC AG 0 0 ,63870:1 1 1 1.000 1.000 4 TCGA:I 14766364 chr17 43014643 43507949 493307 + 0 GC AG 0 0 ,61082:1 1 1 1.000 1.000 4 TCGA:I 14766488 chr17 43014726 43200267 185542 + 0 GC AG 0 0 ,68225:1 1 1 1.000 1.000 4 TCGA:I 14766489 chr17 43014726 43396920 382195 + 0 GC AG 0 0 ,63948:1 1 1 1.000 1.000 4 TCGA:I 14766513 chr17 43014733 43471259 456527 - 0 GC AG 0 0 ,62566:1,63266:1,65322:1,66745:1,68343:1,70637:1,70701:1,70933:1,71024:1 9 9 1.000 1.000 4 TCGA:I 14766524 chr17 43014739 43222247 207509 - 0 GT AG 0 0 ,63588:1 1 1 1.000 1.000 4 TCGA:I 14766525 chr17 43014739 43377615 362877 - 0 GT AG 0 0 ,67659:1 1 1 1.000 1.000 4 TCGA:I 14766552 chr17 43014745 43222253 207509 - 0 GT AG 0 0 ,63588:1 1 1 1.000 1.000 4 TCGA:I 14766553 chr17 43014745 43377621 362877 - 0 GT AG 0 0 ,67659:1 1 1 1.000 1.000 4 TCGA:I 14766554 chr17 43014745 43509474 494730 - 0 GT AG 0 0 ,59862:1,59927:1,60222:1,60348:1,60456:2,60875:2,61377:1,61990:1,62310:1,62373:1,62434:1,62473:1,62722:1,62730:1,63029:1,63257:1,64004:1,64219:1,64763:3,64951:1,65124:1,65884:1,65892:1,66078:1,66417:1,66518:1,66572:2,66739:1,66854:1,67137:1,67205:1,67484:1,68030:1,68071:1,68139:1,68148:1,68161:1,68973:1,69058:1,69265:2,69405:1,69923:1,69980:1,70054:1,70129:1,70255:1,70300:1,70309:1,70414:1,70581:1 50 56 1.120 1.000 4 TCGA:I 14766572 chr17 43014753 43464342 449590 + 0 GC AG 0 0 ,60683:1 1 1 1.000 1.000 4 TCGA:I 14766617 chr17 43014765 43224630 209866 + 0 GC AG 0 0 ,64846:1 1 1 1.000 1.000 4 TCGA:I 14766741 chr17 43014810 43103012 88203 - 0 GT AG 0 0 ,64681:1 1 1 1.000 1.000 4 TCGA:I 14766742 chr17 43014810 43141128 126319 - 0 GT AG 0 0 ,65722:1 1 1 1.000 1.000 4 TCGA:I 14766743 chr17 43014810 43210082 195273 - 0 GT AG 0 0 ,60996:1 1 1 1.000 1.000 4 TCGA:I 14766744 chr17 43014810 43399836 385027 - 0 GT AG 0 0 ,63887:1 1 1 1.000 1.000 4 TCGA:I 14766745 chr17 43014810 43509465 494656 - 0 GT AG 0 0 ,63862:1 1 1 1.000 1.000 4 TCGA:I 14766798 chr17 43014843 43476197 461355 + 0 AT AC 0 0 ,66265:1 1 1 1.000 1.000 4 TCGA:I 14766845 chr17 43014852 43399446 384595 + 0 GT AG 0 0 ,63719:1,70148:1 2 2 1.000 1.000 4 TCGA:I 14766846 chr17 43014852 43419331 404480 + 0 GT AG 0 0 ,62049:1 1 1 1.000 1.000 4 TCGA:I 14766847 chr17 43014852 43476593 461742 + 0 GT AG 0 0 ,61765:1 1 1 1.000 1.000 4 TCGA:I 14766875 chr17 43014867 43138229 123363 - 0 GT AG 0 0 ,60679:1 1 1 1.000 1.000 4 TCGA:I 14766892 chr17 43014871 43190561 175691 + 0 GT AG 0 0 ,62684:1 1 1 1.000 1.000 4 TCGA:I 14766901 chr17 43014874 43133612 118739 - 0 GC AG aC19,gC19,gC38,kG38,sG19,sG38 0 ,62720:1 1 1 1.000 1.000 4 TCGA:I 14766902 chr17 43014874 43364048 349175 - 0 GC AG aC19,gC19,gC38,kG38,sG19,sG38 0 ,65202:1 1 1 1.000 1.000 4 TCGA:I 14766914 chr17 43014879 43048659 33781 - 0 GC AG 0 0 ,66102:1 1 1 1.000 1.000 4 TCGA:I 14766921 chr17 43014881 43104952 90072 + 0 GC AG 0 0 ,70390:1 1 1 1.000 1.000 4 TCGA:I 14766959 chr17 43014898 43373443 358546 + 0 AT AC 0 0 ,65274:1 1 1 1.000 1.000 4 TCGA:I 14766987 chr17 43014900 43373445 358546 - 0 AT AC 0 0 ,65274:1 1 1 1.000 1.000 4 TCGA:I 14767043 chr17 43014930 43222125 207196 + 0 GC AG 0 0 ,66187:1 1 1 1.000 1.000 4 TCGA:I 14767067 chr17 43014935 43218764 203830 - 0 GC AG 0 0 ,69643:1 1 1 1.000 1.000 4 TCGA:I 14767068 chr17 43014935 43231687 216753 - 0 GC AG 0 0 ,59831:1,62228:1,62458:1,65909:1,66233:1,67450:1,69312:1,70194:1 8 8 1.000 1.000 4 TCGA:I 14767069 chr17 43014935 43388861 373927 - 0 GC AG 0 0 ,60020:1,61130:1,63480:1,63702:1,65973:1,70799:1 6 6 1.000 1.000 4 TCGA:I 14767134 chr17 43014962 43377447 362486 - 0 GC AG 0 0 ,63152:1 1 1 1.000 1.000 4 TCGA:I 14767180 chr17 43014986 43202319 187334 + 0 GC AG 0 0 ,64604:1 1 1 1.000 1.000 4 TCGA:I 14767243 chr17 43015033 43468228 453196 - 0 GC AG 0 0 ,60087:1,60686:1,61196:1,61273:1,61310:1,61413:1,61905:1,61999:1,62465:1,62508:1,63101:1,63209:1,63621:1,63768:1,63927:1,64070:1,64290:1,64367:1,64502:1,64643:1,64806:1,65275:1,65635:1,65855:1,66065:2,66114:1,66987:1,67086:1,67265:1,67323:1,67533:1,68369:1,69363:1,69428:1,69783:1,69862:1,69908:1,70508:1,70642:1,70786:1,71020:1,71072:1 42 43 1.024 1.000 4 TCGA:I 14767341 chr17 43015064 43065765 50702 + 0 AT AC 0 0 ,60939:1,65105:1 2 2 1.000 1.000 4 TCGA:I 14767398 chr17 43015075 43313287 298213 + 0 GC AG 0 0 ,63562:1 1 1 1.000 1.000 4 TCGA:I 14767474 chr17 43015124 43223747 208624 + 0 AT AC 0 0 ,61261:1 1 1 1.000 1.000 4 TCGA:I 14767485 chr17 43015127 43476244 461118 + 0 GC AG 0 0 ,64258:1,66022:2,67604:1,67698:2,68386:1,69511:1,70825:2,71021:1 8 11 1.375 1.000 4 TCGA:I 14767514 chr17 43015149 43209886 194738 - 0 GC AG 0 0 ,63710:1 1 1 1.000 1.000 4 TCGA:I 14767565 chr17 43015164 43126429 111266 - 0 GC AG 0 0 ,60348:1,63287:1 2 2 1.000 1.000 4 TCGA:I 14767566 chr17 43015164 43447722 432559 - 0 GC AG 0 0 ,69635:1 1 1 1.000 1.000 4 TCGA:I 14767593 chr17 43015175 43196537 181363 + 0 GC AG 0 0 ,65494:1 1 1 1.000 1.000 4 TCGA:I 14767594 chr17 43015175 43388355 373181 + 0 GC AG 0 0 ,61762:1 1 1 1.000 1.000 4 TCGA:I 14767644 chr17 43015198 43476244 461047 + 0 GC AG 0 0 ,69173:1 1 1 1.000 1.000 4 TCGA:I 14767661 chr17 43015202 43077206 62005 + 0 AT AC 0 0 ,66291:1 1 1 1.000 1.000 4 TCGA:I 14767662 chr17 43015202 43141498 126297 + 0 AT AC 0 0 ,64245:1 1 1 1.000 1.000 4 TCGA:I 14767663 chr17 43015202 43476248 461047 + 0 AT AC 0 0 ,69173:1 1 1 1.000 1.000 4 TCGA:I 14767722 chr17 43015272 43210969 195698 + 0 GC AG 0 0 ,64175:1 1 1 1.000 1.000 4 TCGA:I 14767769 chr17 43015302 43086260 70959 + 0 GT AG 0 0 ,70189:1 1 1 1.000 1.000 4 TCGA:I 14767770 chr17 43015302 43200258 184957 + 0 GT AG 0 0 ,70894:1 1 1 1.000 1.000 4 TCGA:I 14767771 chr17 43015302 43200285 184984 - 0 AT AC 0 0 ,60624:1 1 1 1.000 1.000 4 TCGA:I 14767772 chr17 43015302 43214378 199077 + 0 GT AG 0 0 ,68752:1 1 1 1.000 1.000 4 TCGA:I 14767773 chr17 43015302 43335224 319923 + 0 GT AG 0 0 ,60133:1 1 1 1.000 1.000 4 TCGA:I 14767783 chr17 43015321 43124499 109179 - 0 GC AG 0 0 ,63494:1 1 1 1.000 1.000 4 TCGA:I 14767784 chr17 43015321 43399241 383921 - 0 GT AG 0 0 ,67884:2 1 2 2.000 2.000 4 TCGA:I 14767803 chr17 43015351 43309235 293885 + 0 GT AG 0 0 ,67528:1,69347:1 2 2 1.000 1.000 4 TCGA:I 14767819 chr17 43015366 43210965 195600 + 0 GC AG 0 0 ,60025:3 1 3 3.000 3.000 4 TCGA:I 14767820 chr17 43015366 43476244 460879 + 0 GC AG 0 0 ,64469:1,68184:1 2 2 1.000 1.000 4 TCGA:I 14767829 chr17 43015379 43065718 50340 + 0 AT AC 0 0 ,59912:1,60129:1,60341:1,61198:1,61711:1,63223:1,64485:1,65180:1,65793:1,65856:1,66588:1,67780:1,68191:1,68935:1,70075:1,70131:1 16 16 1.000 1.000 4 TCGA:I 14767830 chr17 43015379 43095599 80221 + 0 AT AC 0 0 ,68675:1 1 1 1.000 1.000 4 TCGA:I 14767876 chr17 43015407 43356228 340822 - 0 GC AG 0 0 ,67162:1 1 1 1.000 1.000 4 TCGA:I 14767935 chr17 43015445 43144391 128947 + 0 GT AG 0 0 ,70259:1 1 1 1.000 1.000 4 TCGA:I 14767967 chr17 43015461 43507627 492167 - 0 AT AC 0 0 ,63838:1,68559:1 2 2 1.000 1.000 4 TCGA:I 14767985 chr17 43015471 43145003 129533 + 0 GC AG 0 0 ,70671:1 1 1 1.000 1.000 4 TCGA:I 14767986 chr17 43015471 43220725 205255 + 0 GC AG 0 0 ,68724:1 1 1 1.000 1.000 4 TCGA:I 14767987 chr17 43015471 43458816 443346 + 0 GC AG 0 0 ,69405:1 1 1 1.000 1.000 4 TCGA:I 14768004 chr17 43015476 43179439 163964 - 0 GC AG 0 0 ,59981:1 1 1 1.000 1.000 4 TCGA:I 14768005 chr17 43015476 43220730 205255 - 0 GC AG 0 0 ,68724:1 1 1 1.000 1.000 4 TCGA:I 14768015 chr17 43015490 43417795 402306 + 0 GC AG 0 0 ,63364:1,68306:1 2 2 1.000 1.000 4 TCGA:I 14768016 chr17 43015490 43444681 429192 + 0 GC AG 0 0 ,67078:1 1 1 1.000 1.000 4 TCGA:I 14768026 chr17 43015499 43211165 195667 - 0 GT AG 0 0 ,59852:1 1 1 1.000 1.000 4 TCGA:I 14768027 chr17 43015499 43444690 429192 - 0 GT AG 0 0 ,59855:1,59856:1,60763:1,60841:1,60969:1,60998:1,61000:1,61117:1,61414:1,61650:1,61756:1,61811:3,61990:1,62427:1,62745:1,63115:2,63345:1,63366:1,63518:1,63588:1,63594:1,63657:2,63706:1,63743:1,63905:1,64024:2,64231:1,64295:1,64305:1,64922:2,64934:1,64942:1,64984:2,65014:1,65071:1,65230:1,65276:1,65621:1,65667:1,65773:1,65860:2,66406:1,66449:1,66500:1,66714:1,66752:1,66756:1,66882:1,67040:1,67078:1,67128:1,67210:1,67449:1,67766:1,68075:1,68178:1,68185:3,68210:1,68273:2,68515:2,68540:2,68596:1,68653:1,68799:1,68860:2,68928:1,68995:1,69074:1,69164:1,69225:1,69532:1,69557:1,69719:1,69820:1,69861:1,69960:1,70027:1,70204:2,70207:1,70518:1,70645:1,70801:1,70819:1,70834:1,70865:1,70980:1 86 101 1.174 1.000 4 TCGA:I 14768035 chr17 43015514 43145003 129490 + 0 GC AG 0 0 ,70441:1 1 1 1.000 1.000 4 TCGA:I 14768095 chr17 43015576 43202663 187088 + 0 GC AG 0 0 ,63893:1,70844:1 2 2 1.000 1.000 4 TCGA:I 14768096 chr17 43015576 43233296 217721 + 0 GC AG 0 0 ,60034:1,60686:1,61262:2,61798:1,61847:1,62186:1,62217:1,62427:1,62487:1,63273:1,63510:1,63593:1,64024:1,64165:1,64231:1,64603:1,64650:2,65236:1,65737:1,66034:1,66049:1,66575:1,67449:1,67546:1,68508:2,68557:1,68774:1,68928:1,69019:1,69036:1,69113:1,69372:2,70196:1,70623:1 34 38 1.118 1.000 4 TCGA:I 14768097 chr17 43015576 43245178 229603 + 0 GC AG 0 0 ,60398:1,60527:1,60801:1,62505:1,63087:1,63673:1,63942:1,64329:1,64427:1,64473:1,64724:1,65067:1,65119:1,65574:1,66344:1,66366:1,66707:1,68601:1,68882:1,70345:1 20 20 1.000 1.000 4 TCGA:I 14768145 chr17 43015596 43145140 129545 + 0 GC AG 0 0 ,63836:1 1 1 1.000 1.000 4 TCGA:I 14768146 chr17 43015596 43351534 335939 + 0 GC AG 0 0 ,63677:1 1 1 1.000 1.000 4 TCGA:I 14768147 chr17 43015596 43476593 460998 + 0 GC AG 0 0 ,63627:1 1 1 1.000 1.000 4 TCGA:I 14768185 chr17 43015622 43047623 32002 + 0 GT AG 0 0 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379 551 1.454 1.000 4 TCGA:I 14768186 chr17 43015622 43211133 195512 + 0 GT AG 0 0 ,62388:1 1 1 1.000 1.000 4 TCGA:I 14768187 chr17 43015622 43221617 205996 + 0 GT AG 0 0 ,60735:1,60802:1,60889:1,61035:1,61488:1,61543:1,61643:1,62055:1,62371:2,62505:1,62518:1,62567:1,62622:1,62681:1,62975:1,63178:1,63363:1,63430:1,63600:1,63685:1,63966:1,64771:1,64945:1,65079:1,65933:1,68323:1,68402:1,68682:1,68909:1,70252:1,70796:1 31 32 1.032 1.000 4 TCGA:I 14768196 chr17 43015626 43047627 32002 + 0 AT AC 0 0 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379 551 1.454 1.000 4 TCGA:I 14768197 chr17 43015626 43316314 300689 + 0 AT AC 0 0 ,60415:1 1 1 1.000 1.000 4 TCGA:I 14768227 chr17 43015667 43178924 163258 - 0 AT AC 0 0 ,69646:1 1 1 1.000 1.000 4 TCGA:I 14768268 chr17 43015686 43159301 143616 - 0 AT AC 0 0 ,62212:1 1 1 1.000 1.000 4 TCGA:I 14768269 chr17 43015686 43218992 203307 + 0 GT AG 0 0 ,64861:1 1 1 1.000 1.000 4 TCGA:I 14768270 chr17 43015686 43233294 217609 + 0 GT AG 0 0 ,65119:1 1 1 1.000 1.000 4 TCGA:I 14768271 chr17 43015686 43335224 319539 + 0 GT AG 0 0 ,64123:1 1 1 1.000 1.000 4 TCGA:I 14768283 chr17 43015689 43245178 229490 + 0 GC AG 0 0 ,62075:1 1 1 1.000 1.000 4 TCGA:I 14768290 chr17 43015694 43400308 384615 + 0 GC AG 0 0 ,70430:1 1 1 1.000 1.000 4 TCGA:I 14768318 chr17 43015717 43145207 129491 + 0 GC AG 0 0 ,70045:1 1 1 1.000 1.000 4 TCGA:I 14768319 chr17 43015717 43200258 184542 + 0 GC AG 0 0 ,68806:1 1 1 1.000 1.000 4 TCGA:I 14768320 chr17 43015717 43384579 368863 + 0 GC AG 0 0 ,67042:1 1 1 1.000 1.000 4 TCGA:I 14768341 chr17 43015723 43134314 118592 + 0 GT AG 0 0 ,70615:1 1 1 1.000 1.000 4 TCGA:I 14768342 chr17 43015723 43145751 130029 + 0 GT AG 0 0 ,61339:1 1 1 1.000 1.000 4 TCGA:I 14768343 chr17 43015723 43191453 175731 + 0 GT AG 0 0 ,69700:1 1 1 1.000 1.000 4 TCGA:I 14768344 chr17 43015723 43210951 195229 - 0 AT AC 0 0 ,67897:1 1 1 1.000 1.000 4 TCGA:I 14768345 chr17 43015723 43211022 195300 + 0 GT AG 0 0 ,70954:1 1 1 1.000 1.000 4 TCGA:I 14768346 chr17 43015723 43230058 214336 + 0 GT AG 0 0 ,69344:1,70780:1 2 2 1.000 1.000 4 TCGA:I 14768347 chr17 43015723 43371336 355614 + 0 GT AG 0 0 ,60114:1 1 1 1.000 1.000 4 TCGA:I 14768348 chr17 43015723 43444897 429175 + 0 GT AG 0 0 ,67735:1 1 1 1.000 1.000 4 TCGA:I 14768361 chr17 43015733 43084838 69106 + 0 AT AC 0 0 ,70442:1 1 1 1.000 1.000 4 TCGA:I 14768362 chr17 43015733 43432695 416963 + 0 AT AC 0 0 ,70332:1 1 1 1.000 1.000 4 TCGA:I 14768367 chr17 43015753 43178904 163152 - 0 GT AG 0 0 ,60277:1 1 1 1.000 1.000 4 TCGA:I 14768376 chr17 43015756 43407385 391630 + 0 GC AG 0 0 ,63415:1 1 1 1.000 1.000 4 TCGA:I 14768450 chr17 43015786 43384725 368940 + 0 GC AG 0 0 ,65441:1,67619:1 2 2 1.000 1.000 4 TCGA:I 14768470 chr17 43015799 43306378 290580 + 0 GT AG 0 0 ,62323:1 1 1 1.000 1.000 4 TCGA:I 14768490 chr17 43015805 43079329 63525 + 0 GC AG 0 0 ,69736:1 1 1 1.000 1.000 4 TCGA:I 14768548 chr17 43015821 43146801 130981 - 0 GT AG 0 0 ,70272:1,70496:1 2 2 1.000 1.000 4 TCGA:I 14768558 chr17 43015825 43125158 109334 - 0 GC AG 0 0 ,59999:1 1 1 1.000 1.000 4 TCGA:I 14768563 chr17 43015827 43474916 459090 - 0 GC AG 0 0 ,64857:1 1 1 1.000 1.000 4 TCGA:I 14768613 chr17 43015848 43338801 322954 + 0 GC AG 0 0 ,70097:1 1 1 1.000 1.000 4 TCGA:I 14768660 chr17 43015883 43348159 332277 - 0 GT AG 0 0 ,60939:1,64097:1,66406:1,67555:1 4 4 1.000 1.000 4 TCGA:I 14768661 chr17 43015883 43444654 428772 - 0 GT AG 0 0 ,62212:1,62963:1,63300:1,64841:1,65612:2,66143:1,66628:1 7 8 1.143 1.000 4 TCGA:I 14768681 chr17 43015893 43120550 104658 + 0 GT AG 0 0 ,60625:1,60633:1,61866:1,61885:1,62794:1,63119:1,66116:1,66710:1,67433:1,67734:1,68772:1,69036:1,69224:1,69375:1,69814:1,70685:1,70829:2 17 18 1.059 1.000 4 TCGA:I 14768723 chr17 43015941 43459053 443113 - 0 GT AG 0 0 ,68529:1 1 1 1.000 1.000 4 TCGA:I 14768731 chr17 43015962 43484029 468068 + 0 GC AG 0 0 ,68878:1 1 1 1.000 1.000 4 TCGA:I 14768751 chr17 43015976 43430777 414802 + 0 GC AG 0 0 ,71037:1 1 1 1.000 1.000 4 TCGA:I 14768789 chr17 43016007 43055772 39766 - 0 AT AC 0 0 ,71069:1 1 1 1.000 1.000 4 TCGA:I 14768800 chr17 43016019 43469353 453335 - 0 GT AG 0 0 ,61858:1 1 1 1.000 1.000 4 TCGA:I 14768815 chr17 43016034 43401018 384985 + 0 GT AG 0 0 ,65133:1 1 1 1.000 1.000 4 TCGA:I 14768881 chr17 43016070 43135203 119134 - 0 GC AG 0 0 ,67410:1 1 1 1.000 1.000 4 TCGA:I 14768891 chr17 43016075 43401533 385459 - 0 GC AG 0 0 ,60923:1 1 1 1.000 1.000 4 TCGA:I 14768912 chr17 43016097 43407058 390962 - 0 GT AG 0 0 ,70733:1 1 1 1.000 1.000 4 TCGA:I 14768987 chr17 43016145 43337904 321760 - 0 GT AG aC19,cG19,cG38,gC19,gC38,kG19,kG38,mG19,mG38,rG19,rG38,sG19,sG38 0 ,60187:1,60769:1,64014:1,65494:1,67857:1,68402:1,70811:1 7 7 1.000 1.000 4 TCGA:I 14768988 chr17 43016145 43396184 380040 - 0 GT AG aC19,cG19,cG38,gC19,gC38,kG19,kG38,mG19,mG38,rG19,rG38,sG19,sG38 0 ,64074:1 1 1 1.000 1.000 4 TCGA:I 14769037 chr17 43016346 43096987 80642 + 0 GT AG 0 0 ,70706:1 1 1 1.000 1.000 4 TCGA:I 14769038 chr17 43016346 43131255 114910 - 0 AT AC 0 0 ,70988:1 1 1 1.000 1.000 4 TCGA:I 14769039 chr17 43016346 43214389 198044 - 0 AT AC 0 0 ,59835:1,60272:1,60385:7,60480:1,60707:1,61275:1,61553:1,61561:1,61640:1,61761:1,61915:1,62684:1,62765:1,62989:1,63007:2,63182:1,63314:1,63389:1,63697:1,63790:1,63797:1,64121:1,64510:1,64714:1,64880:1,65155:1,65339:1,65822:1,65859:1,65974:1,66211:1,66218:1,66306:1,66432:1,66464:1,66505:1,66570:1,66638:1,67861:1,68070:1,68114:1,68386:1,68449:1,68860:1,68940:1,69034:1,69551:1,69655:1,69759:1,69760:1,69996:1,70024:1,70084:1,70232:1,70239:1,70402:1,70457:1,70553:1,70571:1,70910:1,70991:1,71065:1 62 69 1.113 1.000 4 TCGA:I 14769061 chr17 43016358 43123281 106924 - 0 AT AC 0 0 ,66885:1,69428:1 2 2 1.000 1.000 4 TCGA:I 14769062 chr17 43016358 43159973 143616 - 0 AT AC 0 0 ,59904:1,60320:1,62732:1,63130:1 4 4 1.000 1.000 4 TCGA:I 14769079 chr17 43016373 43211604 195232 + 0 GC AG 0 0 ,68185:1 1 1 1.000 1.000 4 TCGA:I 14769080 chr17 43016373 43245178 228806 + 0 GC AG 0 0 ,60496:1 1 1 1.000 1.000 4 TCGA:I 14769081 chr17 43016373 43449840 433468 + 0 GC AG 0 0 ,63154:1 1 1 1.000 1.000 4 TCGA:I 14769090 chr17 43016396 43066734 50339 + 0 GC AG 0 0 ,61907:1,66616:1,67265:1,69759:1 4 4 1.000 1.000 4 TCGA:I 14769103 chr17 43016403 43066741 50339 - 0 GT AG 0 0 ,61907:1,66616:1,67265:1 3 3 1.000 1.000 4 TCGA:I 14769104 chr17 43016403 43217796 201394 - 0 GT AG 0 0 ,64106:1 1 1 1.000 1.000 4 TCGA:I 14769105 chr17 43016403 43407075 390673 - 0 GT AG 0 0 ,68505:1 1 1 1.000 1.000 4 TCGA:I 14769106 chr17 43016403 43418633 402231 - 0 GT AG 0 0 ,71069:1 1 1 1.000 1.000 4 TCGA:I 14769107 chr17 43016403 43508506 492104 - 0 GT AG 0 0 ,60389:1 1 1 1.000 1.000 4 TCGA:I 14769119 chr17 43016415 43170911 154497 + 0 GT AG 0 0 ,62526:1 1 1 1.000 1.000 4 TCGA:I 14769120 chr17 43016415 43464516 448102 + 0 GT AG 0 0 ,69664:1 1 1 1.000 1.000 4 TCGA:I 14769129 chr17 43016424 43194499 178076 + 0 GT AG 0 0 ,62443:1 1 1 1.000 1.000 4 TCGA:I 14769130 chr17 43016424 43348928 332505 + 0 GT AG 0 0 ,65668:1 1 1 1.000 1.000 4 TCGA:I 14769144 chr17 43016451 43171269 154819 - 0 GC AG 0 0 ,60076:1 1 1 1.000 1.000 4 TCGA:I 14769145 chr17 43016451 43400257 383807 - 0 GC AG 0 0 ,69654:1 1 1 1.000 1.000 4 TCGA:I 14769148 chr17 43016453 43476244 459792 + 0 GC AG 0 0 ,59897:2 1 2 2.000 2.000 4 TCGA:I 14769170 chr17 43016500 43476641 460142 + 0 GC AG 0 0 ,62874:1 1 1 1.000 1.000 4 TCGA:I 14769195 chr17 43016538 43095142 78605 + 0 GT AG 0 0 ,69505:1 1 1 1.000 1.000 4 TCGA:I 14769212 chr17 43016549 43047642 31094 - 0 GT AG aC19,cG19,cG38,gC19,gC38,kG19,kG38,mG19,mG38,rG19,rG38,sG19,sG38 aC19,cG19,cG38,gC19,gC38,kG19,kG38,mG19,mG38,rG19,rG38,sG19,sG38,vG19 ,59967:1,60632:1,61022:1,61409:1,64818:1,67050:1,67344:1,68362:1,69200:1,69534:1,69537:1,69927:1 12 12 1.000 1.000 4 TCGA:I 14769213 chr17 43016549 43049120 32572 - 0 GT AG aC19,cG19,cG38,gC19,gC38,kG19,kG38,mG19,mG38,rG19,rG38,sG19,sG38 aC19,cG19,cG38,gC19,gC38,kG19,kG38,mG19,mG38,rG19,rG38,sG19,sG38,vG19 ,62083:1 1 1 1.000 1.000 4 TCGA:I 14769214 chr17 43016549 43125270 108722 - 0 GT AG aC19,cG19,cG38,gC19,gC38,kG19,kG38,mG19,mG38,rG19,rG38,sG19,sG38 aC19,gC19,gC38,kG19,kG38,mG19,mG38,rG19,rG38,sG19,vG19 ,62012:1,62173:1,62393:1,65080:1 4 4 1.000 1.000 4 TCGA:I 14769215 chr17 43016549 43125276 108728 - 0 GT AG aC19,cG19,cG38,gC19,gC38,kG19,kG38,mG19,mG38,rG19,rG38,sG19,sG38 aC19,gC19,gC38,kG19,kG38,rG19,rG38,sG38,vG19 ,70590:1 1 1 1.000 1.000 4 TCGA:I 14769222 chr17 43016787 43400071 383285 + 0 GT AG 0 0 ,63421:1,69495:1 2 2 1.000 1.000 4 TCGA:I 14769225 chr17 43016805 43500271 483467 + 0 GT AG 0 0 ,70538:1 1 1 1.000 1.000 4 TCGA:I 14769230 chr17 43016834 43230794 213961 + 0 AT AC 0 0 ,67721:1 1 1 1.000 1.000 4 TCGA:I 14769245 chr17 43017126 43218247 201122 - 0 GT AG 0 0 ,62680:1 1 1 1.000 1.000 4 TCGA:I 14769248 chr17 43017131 43218252 201122 - 0 GC AG 0 0 ,62680:1 1 1 1.000 1.000 4 TCGA:I 14769259 chr17 43017414 43122875 105462 - 0 GC AG 0 0 ,61822:1 1 1 1.000 1.000 4 TCGA:I 14769302 chr17 43017895 43375401 357507 - 0 GC AG 0 0 ,60259:1,60362:1,60579:1,61051:1,61880:1,62346:1,63639:1,63925:1,63982:1,64058:1,66665:1,68175:1,68673:1,70165:1 14 14 1.000 1.000 4 TCGA:I 14769321 chr17 43017931 43049120 31190 - 0 GT AG aC19,cG19,cG38,gC19,gC38,kG19,kG38,mG19,mG38,rG19,rG38,sG19,sG38 aC19,cG19,cG38,gC19,gC38,kG19,kG38,mG19,mG38,rG19,rG38,sG19,sG38,vG19 ,59796:1 1 1 1.000 1.000 4 TCGA:I 14769360 chr17 43018096 43316199 298104 - 0 AT AC 0 0 ,68250:1 1 1 1.000 1.000 4 TCGA:I 14769361 chr17 43018096 43364327 346232 + 0 GT AG 0 0 ,66184:1 1 1 1.000 1.000 4 TCGA:I 14769431 chr17 43018207 43045661 27455 - 0 GT AG aC19,cG19,cG38,gC19,gC38,kG19,kG38,mG19,mG38,rG19,rG38,sG19,sG38 0 ,69687:1 1 1 1.000 1.000 4 TCGA:I 14769432 chr17 43018207 43047642 29436 - 0 GT AG aC19,cG19,cG38,gC19,gC38,kG19,kG38,mG19,mG38,rG19,rG38,sG19,sG38 aC19,cG19,cG38,gC19,gC38,kG19,kG38,mG19,mG38,rG19,rG38,sG19,sG38,vG19 ,62266:1 1 1 1.000 1.000 4 TCGA:I 14769436 chr17 43018209 43053262 35054 + 0 GC AG 0 0 ,69599:1 1 1 1.000 1.000 4 TCGA:I 14769442 chr17 43018273 43125630 107358 - 0 GC AG 0 0 ,64984:1 1 1 1.000 1.000 4 TCGA:I 14769494 chr17 43018660 43343667 325008 + 0 GC AG 0 0 ,60997:1,64675:4 2 5 2.500 2.500 4 TCGA:I 14769501 chr17 43018668 43343675 325008 - 0 AT AC 0 0 ,64675:4 1 4 4.000 4.000 4 TCGA:I 14769509 chr17 43018684 43145069 126386 + 0 GC AG 0 0 ,61171:1 1 1 1.000 1.000 4 TCGA:I 14769548 chr17 43018762 43124558 105797 + 0 AT AC 0 0 ,60579:1 1 1 1.000 1.000 4 TCGA:I 14769569 chr17 43018796 43047642 28847 - 0 GT AG 0 aC19,cG19,cG38,gC19,gC38,kG19,kG38,mG19,mG38,rG19,rG38,sG19,sG38,vG19 ,63153:1,66259:1,70502:1 3 3 1.000 1.000 4 TCGA:I 14769610 chr17 43018800 43045661 26862 - 0 GT AG aC19,cG19,cG38,gC19,gC38,kG19,kG38,mG19,mG38,rG19,rG38,sG19,sG38 0 ,59790:1,59799:1,59865:1,59898:1,59910:1,59914:1,59918:1,59935:1,59949:1,59958:1,59971:1,60019:1,60154:2,60157:1,60160:2,60189:1,60336:1,60413:1,60423:1,60459:1,60497:2,60521:1,60568:1,60631:1,60769:1,60801:1,60848:1,61084:1,61274:1,61304:1,61313:1,61373:1,61374:1,61376:1,61380:1,61434:1,61449:1,61489:1,61545:1,61566:1,61594:1,61642:1,61672:1,61719:1,61752:1,61765:1,61787:1,61877:2,61944:1,61958:2,61983:1,62005:1,62042:1,62126:1,62208:1,62239:1,62304:2,62366:1,62393:1,62435:2,62491:1,62559:1,62589:1,62641:1,62702:1,62704:1,62758:1,62996:1,63008:1,63092:1,63118:1,63128:1,63153:1,63157:1,63161:1,63188:1,63278:1,63281:1,63293:1,63334:1,63335:1,63366:1,63393:1,63395:1,63426:1,63455:1,63511:1,63544:2,63668:1,63734:1,63752:1,63763:1,63804:2,63820:1,64083:1,64100:2,64173:1,64304:1,64350:1,64366:1,64375:1,64522:2,64528:1,64669:2,64683:1,64710:1,64740:2,64772:1,64818:1,64921:1,64941:1,64954:1,65032:1,65034:1,65058:3,65072:1,65096:1,65158:1,65166:1,65290:1,65376:1,65403:1,65429:1,65462:1,65470:1,65544:1,65552:1,65599:1,65625:1,65644:1,65672:1,65701:1,65757:1,65769:1,65810:1,65819:1,65886:2,65891:1,65915:1,65935:1,65958:1,65963:1,65979:1,65988:2,66041:1,66070:1,66213:1,66261:1,66358:1,66378:1,66413:1,66509:1,66585:1,66722:1,66729:1,66739:1,66741:1,66852:1,66879:1,66952:1,67022:2,67090:2,67120:1,67169:1,67185:1,67283:1,67367:1,67368:1,67401:1,67420:1,67455:1,67483:1,67520:1,67546:1,67567:1,67582:1,67632:1,67652:1,67659:2,67667:1,67715:1,67733:2,67743:1,67748:1,67901:1,67951:1,68033:1,68084:1,68154:1,68163:1,68253:1,68266:2,68325:1,68329:1,68364:1,68373:1,68413:1,68419:1,68427:1,68534:1,68537:1,68565:3,68576:1,68589:1,68590:2,68610:1,68643:1,68694:1,68700:1,68705:1,68732:1,68750:1,68761:1,68856:1,68865:1,68898:1,68997:1,69177:1,69237:2,69283:1,69285:1,69291:1,69328:2,69361:1,69421:1,69451:1,69511:1,69517:1,69521:1,69535:1,69720:1,69796:1,69873:1,69905:1,69961:1,69962:1,69968:1,69990:1,70040:1,70049:1,70065:1,70210:1,70223:1,70247:1,70323:1,70389:1,70457:1,70593:1,70602:1,70611:1,70621:1,70700:1,70705:1,70774:1,70836:1,70846:1,70912:1,70923:1,70970:1,70971:1,71013:1,71038:1,71088:1,71105:1 264 291 1.102 1.000 4 TCGA:I 14769611 chr17 43018800 43047637 28838 - 0 GT AG aC19,cG19,cG38,gC19,gC38,kG19,kG38,mG19,mG38,rG19,rG38,sG19,sG38 0 ,60769:2,63453:1,65442:1,67835:1,67857:1,67881:1,68084:1,68217:1,68441:1 9 10 1.111 1.000 4 TCGA:I 14769612 chr17 43018800 43047642 28843 - 0 GT AG aC19,cG19,cG38,gC19,gC38,kG19,kG38,mG19,mG38,rG19,rG38,sG19,sG38 aC19,cG19,cG38,gC19,gC38,kG19,kG38,mG19,mG38,rG19,rG38,sG19,sG38,vG19 ,59772:1,59799:1,59834:2,59839:1,59952:1,60009:1,60027:1,60076:1,60150:1,60202:1,60207:1,60270:1,60294:1,60384:1,60392:1,60394:1,60485:1,60583:1,60664:1,60682:1,60714:1,60829:1,60871:1,60931:1,61022:1,61126:1,61137:1,61211:1,61248:1,61273:1,61291:1,61328:1,61370:1,61449:2,61472:1,61568:1,61594:1,61625:1,61628:1,61631:1,61653:1,61732:1,61753:1,61783:1,61820:1,61836:1,61839:1,61865:1,61909:1,62006:1,62257:1,62258:1,62263:1,62266:1,62351:1,62458:1,62496:1,62515:1,62525:1,62548:2,62599:1,62609:1,62617:1,62676:1,62700:1,62702:2,62803:1,62854:1,62881:1,62956:2,62973:1,62995:1,63124:1,63178:1,63185:1,63215:1,63241:2,63305:3,63335:1,63345:2,63369:1,63379:1,63389:1,63476:2,63485:1,63530:1,63594:2,63652:1,63706:1,63712:1,63753:3,63758:1,63808:1,63895:1,63946:1,64046:2,64048:1,64050:1,64051:1,64148:3,64186:1,64191:2,64284:1,64321:1,64332:1,64340:1,64366:1,64406:1,64445:1,64511:1,64533:2,64552:1,64569:1,64612:1,64636:1,64648:1,64658:1,64679:1,64788:1,64795:1,64837:1,64930:1,64947:1,65017:1,65106:1,65154:1,65164:1,65238:1,65371:1,65376:2,65460:1,65462:2,65464:1,65640:1,65707:1,65770:1,65864:1,65885:1,65909:1,66000:1,66149:1,66157:1,66169:2,66185:1,66218:1,66364:1,66378:1,66436:1,66444:1,66464:1,66525:2,66563:1,66618:1,66648:1,66653:1,66728:1,66738:1,66751:1,66780:1,66799:2,66856:1,67036:2,67130:1,67154:1,67157:1,67183:1,67186:1,67199:1,67367:3,67385:1,67410:1,67433:1,67471:1,67497:1,67502:1,67504:1,67583:1,67623:1,67680:1,67694:1,67775:1,67783:1,67794:1,67818:1,67881:2,67887:1,67900:1,67996:1,68024:2,68177:1,68209:1,68211:1,68329:1,68368:2,68377:1,68406:1,68416:1,68417:1,68429:1,68439:2,68530:1,68577:1,68590:1,68647:1,68758:1,68804:1,68817:1,68865:1,68935:2,68959:1,69076:1,69249:1,69256:1,69261:1,69277:1,69285:1,69299:1,69300:2,69323:1,69535:1,69571:1,69592:1,69655:1,69680:1,69681:1,69709:1,69752:1,69864:1,69931:1,69953:1,69998:1,70007:1,70025:1,70064:1,70082:1,70085:1,70106:1,70141:1,70165:1,70236:1,70254:1,70305:1,70325:1,70344:1,70364:1,70373:1,70380:1,70473:1,70505:1,70548:1,70593:2,70614:1,70678:1,70807:1,70921:1,70971:2,71001:1,71003:2,71024:1,71046:1,71064:1,71098:1 262 297 1.134 1.000 4 TCGA:I 14769613 chr17 43018800 43049120 30321 - 0 GT AG aC19,cG19,cG38,gC19,gC38,kG19,kG38,mG19,mG38,rG19,rG38,sG19,sG38 aC19,cG19,cG38,gC19,gC38,kG19,kG38,mG19,mG38,rG19,rG38,sG19,sG38,vG19 ,59773:1,59995:1,60195:1,60200:1,60441:1,60472:2,60804:1,60863:1,61057:1,61346:1,61379:1,61500:1,61543:1,61593:1,61750:1,61988:1,62376:2,62737:1,62821:1,63359:1,63370:1,64144:1,64299:1,64341:1,64350:1,64421:1,64610:1,64702:1,64859:1,64947:1,65113:1,65148:1,65261:1,65857:1,66660:1,66731:1,66892:1,67065:2,67347:1,67516:2,67737:1,67810:1,67991:1,68285:1,68327:2,68341:1,68887:1,68896:1,69076:1,69091:1,69256:1,70108:1,70378:1,70522:1,70723:1,70760:1,71041:1 57 62 1.088 1.000 4 TCGA:I 14769614 chr17 43018800 43170125 151326 - 0 GT AG aC19,cG19,cG38,gC19,gC38,kG19,kG38,mG19,mG38,rG19,rG38,sG19,sG38 aC19,gC19,gC38,kG19,kG38,rG19,rG38,sG19,sG38 ,62983:1,63880:1,65374:1 3 3 1.000 1.000 4 TCGA:I 14769629 chr17 43019464 43196828 177365 + 0 GC AG 0 0 ,62012:1,62323:1,64810:1,69837:1 4 4 1.000 1.000 4 TCGA:I 14769634 chr17 43019681 43401791 382111 - 0 GT AG 0 0 ,67242:1 1 1 1.000 1.000 4 TCGA:I 14769652 chr17 43020239 43233450 213212 + 0 GC AG 0 0 ,61729:1 1 1 1.000 1.000 4 TCGA:I 14769655 chr17 43020641 43117503 96863 + 0 GC AG 0 0 ,62862:1 1 1 1.000 1.000 4 TCGA:I 14769656 chr17 43020647 43117509 96863 + 0 GT AG 0 0 ,62862:1 1 1 1.000 1.000 4 TCGA:I 14769658 chr17 43020694 43065484 44791 + 0 AT AC 0 0 ,61810:1 1 1 1.000 1.000 4 TCGA:I 14769660 chr17 43020918 43517990 497073 - 0 GT AG 0 0 ,60351:1 1 1 1.000 1.000 4 TCGA:I 14769688 chr17 43021470 43486930 465461 - 0 GT AG 0 0 ,69085:1 1 1 1.000 1.000 4 TCGA:I 14769690 chr17 43021503 43210528 189026 - 0 GT AG 0 0 ,65848:1 1 1 1.000 1.000 4 TCGA:I 14769710 chr17 43021759 43400827 379069 + 0 AT AC 0 0 ,61640:1,70398:1 2 2 1.000 1.000 4 TCGA:I 14769725 chr17 43021954 43379021 357068 - 0 GC AG 0 0 ,61234:1 1 1 1.000 1.000 4 TCGA:I 14769747 chr17 43022004 43126839 104836 + 0 GC AG 0 0 ,68482:1 1 1 1.000 1.000 4 TCGA:I 14769748 chr17 43022004 43233290 211287 + 0 GC AG 0 0 ,64837:1 1 1 1.000 1.000 4 TCGA:I 14769749 chr17 43022004 43245172 223169 + 0 GC AG 0 0 ,64309:1 1 1 1.000 1.000 4 TCGA:I 14769750 chr17 43022004 43351024 329021 + 0 GC AG 0 0 ,66417:1 1 1 1.000 1.000 4 TCGA:I 14769751 chr17 43022004 43468222 446219 + 0 GC AG 0 0 ,66572:1 1 1 1.000 1.000 4 TCGA:I 14769760 chr17 43022010 43233296 211287 + 0 GC AG 0 0 ,60010:1,60203:1,61134:1,61702:1,61847:1,62091:1,62376:1,62954:1,63053:1,63115:1,63607:1,63611:1,63613:1,63706:1,63952:1,64098:2,64226:1,64309:1,64468:1,64541:1,64698:1,65074:1,65250:1,65769:1,66805:1,66928:1,67151:1,67571:1,67727:1,68484:1,68492:1,68845:1,68904:1,69012:1,69115:1,69506:1,70370:1,70457:2,70881:1 39 41 1.051 1.000 4 TCGA:I 14769761 chr17 43022010 43245178 223169 + 0 GC AG 0 0 ,60003:1,60094:1,60896:1,60918:1,61900:1,62327:1,64098:1,65267:1,67145:1,68028:1,68484:1,68901:1 12 12 1.000 1.000 4 TCGA:I 14769762 chr17 43022010 43251336 229327 + 0 GC AG 0 0 ,60503:1 1 1 1.000 1.000 4 TCGA:I 14769763 chr17 43022010 43277496 255487 + 0 GC AG 0 0 ,70479:1 1 1 1.000 1.000 4 TCGA:I 14769766 chr17 43022023 43169637 147615 + 0 GT AG 0 0 ,69112:1 1 1 1.000 1.000 4 TCGA:I 14769767 chr17 43022023 43379014 356992 + 0 GT AG 0 0 ,70811:1 1 1 1.000 1.000 4 TCGA:I 14769789 chr17 43022069 43476600 454532 + 0 GC AG 0 0 ,64042:1 1 1 1.000 1.000 4 TCGA:I 14769815 chr17 43022143 43233572 211430 + 0 GT AG 0 0 ,68700:1 1 1 1.000 1.000 4 TCGA:I 14769825 chr17 43022151 43420963 398813 - 0 GC AG sG19,sG38 0 ,70441:1 1 1 1.000 1.000 4 TCGA:I 14769843 chr17 43022181 43233290 211110 + 0 GC AG 0 0 ,61919:1 1 1 1.000 1.000 4 TCGA:I 14769861 chr17 43022195 43322558 300364 + 0 GC AG 0 0 ,68198:1 1 1 1.000 1.000 4 TCGA:I 14769862 chr17 43022195 43476407 454213 + 0 GC AG 0 0 ,60299:1 1 1 1.000 1.000 4 TCGA:I 14769867 chr17 43022198 43322558 300361 + 0 GC AG 0 0 ,68913:1 1 1 1.000 1.000 4 TCGA:I 14769874 chr17 43022201 43261402 239202 + 0 GC AG 0 0 ,64592:1 1 1 1.000 1.000 4 TCGA:I 14769906 chr17 43022268 43377303 355036 + 0 GC AG 0 0 ,67699:1 1 1 1.000 1.000 4 TCGA:I 14769916 chr17 43022351 43045661 23311 - 0 GT AG aC19,gC19,gC38,kG38,sG19,sG38 0 ,66270:1 1 1 1.000 1.000 4 TCGA:I 14769917 chr17 43022351 43047642 25292 - 0 GT AG aC19,gC19,gC38,kG38,sG19,sG38 aC19,cG19,cG38,gC19,gC38,kG19,kG38,mG19,mG38,rG19,rG38,sG19,sG38,vG19 ,59773:1,60351:1,61765:1,62613:1,63160:1,63188:2,63251:1,63537:1,65277:2,65415:2,66179:1,67433:1,67608:1,67623:2,67851:1,68864:1,68884:1,69032:1,69534:1,69648:1,70054:1,70373:1,70548:1 23 27 1.174 1.000 4 TCGA:I 14769918 chr17 43022351 43049120 26770 - 0 GT AG aC19,gC19,gC38,kG38,sG19,sG38 aC19,cG19,cG38,gC19,gC38,kG19,kG38,mG19,mG38,rG19,rG38,sG19,sG38,vG19 ,64475:1,65231:1,69927:1,70049:1 4 4 1.000 1.000 4 TCGA:I 14769921 chr17 43022362 43512534 490173 + 0 GT AG 0 0 ,70498:1 1 1 1.000 1.000 4 TCGA:I 14769922 chr17 43022364 43079329 56966 + 0 GC AG 0 0 ,69467:1 1 1 1.000 1.000 4 TCGA:I 14769925 chr17 43022370 43047642 25273 - 0 GT AG 0 aC19,cG19,cG38,gC19,gC38,kG19,kG38,mG19,mG38,rG19,rG38,sG19,sG38,vG19 ,60931:1,61360:1,61564:1,62393:1,63524:1,66180:1,66765:1,68742:1,70021:1 9 9 1.000 1.000 4 TCGA:I 14769929 chr17 43022492 43047642 25151 - 0 GT AG 0 aC19,cG19,cG38,gC19,gC38,kG19,kG38,mG19,mG38,rG19,rG38,sG19,sG38,vG19 ,63244:1 1 1 1.000 1.000 4 TCGA:I 14769934 chr17 43022628 43067122 44495 - 0 GT AG 0 0 ,65530:1 1 1 1.000 1.000 4 TCGA:I 14769939 chr17 43022788 43151793 129006 + 0 GC AG 0 0 ,62413:1 1 1 1.000 1.000 4 TCGA:I 14769942 chr17 43022813 43514267 491455 - 0 GC AG 0 0 ,62322:2 1 2 2.000 2.000 4 TCGA:I 14769944 chr17 43022820 43072318 49499 + 0 GC AG 0 0 ,61344:1,63206:1 2 2 1.000 1.000 4 TCGA:I 14769945 chr17 43022820 43108922 86103 + 0 GC AG 0 0 ,61290:1 1 1 1.000 1.000 4 TCGA:I 14769946 chr17 43022820 43487906 465087 + 0 GC AG 0 0 ,61983:1 1 1 1.000 1.000 4 TCGA:I 14769950 chr17 43022826 43108641 85816 + 0 GT AG 0 0 ,67482:1 1 1 1.000 1.000 4 TCGA:I 14769951 chr17 43022826 43108928 86103 + 0 GT AG 0 0 ,61290:1 1 1 1.000 1.000 4 TCGA:I 14769952 chr17 43022826 43487912 465087 + 0 GT AG 0 0 ,61983:1 1 1 1.000 1.000 4 TCGA:I 14769953 chr17 43022901 43206191 183291 + 0 GC AG 0 0 ,70311:1 1 1 1.000 1.000 4 TCGA:I 14769954 chr17 43022922 43168377 145456 - 0 GC AG 0 0 ,64085:1 1 1 1.000 1.000 4 TCGA:I 14769955 chr17 43022959 43202748 179790 + 0 GT AG 0 0 ,64083:1 1 1 1.000 1.000 4 TCGA:I 14769956 chr17 43022968 43218442 195475 - 0 GT AG 0 0 ,60938:1 1 1 1.000 1.000 4 TCGA:I 14769957 chr17 43022968 43500266 477299 - 0 GT AG 0 0 ,65742:1 1 1 1.000 1.000 4 TCGA:I 14769958 chr17 43022973 43500271 477299 + 0 GT AG 0 0 ,65742:1 1 1 1.000 1.000 4 TCGA:I 14769959 chr17 43023017 43156067 133051 - 0 GC AG 0 0 ,61730:1,65939:1 2 2 1.000 1.000 4 TCGA:I 14769960 chr17 43023090 43072286 49197 + 0 GC AG 0 0 ,68051:1 1 1 1.000 1.000 4 TCGA:I 14769961 chr17 43023199 43137905 114707 + 0 GC AG 0 0 ,63160:1,69325:1 2 2 1.000 1.000 4 TCGA:I 14769963 chr17 43023491 43046948 23458 - 0 AT AC 0 0 ,65380:1,69930:1 2 2 1.000 1.000 4 TCGA:I 14769964 chr17 43023825 43057825 34001 + 0 GT AG 0 0 ,66060:1 1 1 1.000 1.000 4 TCGA:I 14769965 chr17 43023825 43204965 181141 + 0 GT AG 0 0 ,67979:1 1 1 1.000 1.000 4 TCGA:I 14769966 chr17 43023825 43395947 372123 + 0 GT AG 0 0 ,68011:1 1 1 1.000 1.000 4 TCGA:I 14769969 chr17 43023889 43437341 413453 - 0 GC AG 0 0 ,65651:1 1 1 1.000 1.000 4 TCGA:I 14769971 chr17 43024064 43139833 115770 - 0 GC AG 0 0 ,63807:1 1 1 1.000 1.000 4 TCGA:I 14769973 chr17 43024239 43419961 395723 + 0 GC AG 0 0 ,69408:1 1 1 1.000 1.000 4 TCGA:I 14769974 chr17 43024255 43419977 395723 + 0 GC AG 0 0 ,69408:1 1 1 1.000 1.000 4 TCGA:I 14769976 chr17 43024362 43513914 489553 - 0 AT AC 0 0 ,63596:1,65397:1,67004:1,67639:1,68877:1,69100:1,69552:1,70778:1 8 8 1.000 1.000 4 TCGA:I 14769996 chr17 43025178 43307003 281826 - 0 GC AG 0 0 ,63389:1,63562:1,64462:1,65901:1 4 4 1.000 1.000 4 TCGA:I 14769998 chr17 43025231 43160363 135133 + 0 GC AG 0 0 ,68615:2 1 2 2.000 2.000 4 TCGA:I 14770030 chr17 43025440 43056532 31093 - 0 GC AG 0 0 ,59806:1,60256:1,61905:1,63859:1,63961:1 5 5 1.000 1.000 4 TCGA:I 14770036 chr17 43025450 43047120 21671 + 0 GT AG aC19,cG19,cG38,gC19,gC38,kG19,kG38,mG19,mG38,rG19,rG38,sG19,sG38 0 ,60823:1,64056:1 2 2 1.000 1.000 4 TCGA:I 14770038 chr17 43025479 43065599 40121 + 0 GC AG 0 0 ,65571:1 1 1 1.000 1.000 4 TCGA:I 14770039 chr17 43025485 43219197 193713 + 0 GC AG 0 0 ,68160:1 1 1 1.000 1.000 4 TCGA:I 14770048 chr17 43025818 43232127 206310 - 0 GT AG 0 0 ,62315:1 1 1 1.000 1.000 4 TCGA:I 14770069 chr17 43026048 43046418 20371 + 0 GT AG aC19,cG19,cG38,gC19,gC38,kG19,kG38,mG19,mG38,rG19,rG38,sG19,sG38 0 ,60049:1,60366:1,60560:1,60644:2,61104:1,61750:1,62645:1,62765:1,63721:1,63842:2,64810:1,65046:1,65141:1,65872:1,65894:1,66271:1,66329:1,66569:1,66759:2,66806:1,67362:1,67498:1,67628:1,67799:1,68076:1,68343:1,68420:1,68456:1,68555:1,68575:1,68828:1,69089:1,69351:1,69467:1,69535:1,70059:1,70156:1,70378:1,70664:1,70768:1,71055:1,71103:1 42 45 1.071 1.000 4 TCGA:I 14770070 chr17 43026048 43046442 20395 + 0 GT AG aC19,cG19,cG38,gC19,gC38,kG19,kG38,mG19,mG38,rG19,rG38,sG19,sG38 0 ,66949:1 1 1 1.000 1.000 4 TCGA:I 14770071 chr17 43026048 43047120 21073 + 0 GT AG aC19,cG19,cG38,gC19,gC38,kG19,kG38,mG19,mG38,rG19,rG38,sG19,sG38 0 ,59787:1,59817:1,59818:1,59878:1,59885:2,59907:2,59919:1,59981:1,59984:3,60001:1,60003:1,60049:7,60058:2,60062:2,60118:1,60150:1,60159:7,60207:1,60208:2,60237:2,60256:1,60341:1,60346:1,60349:2,60393:1,60450:1,60465:1,60517:1,60560:1,60598:1,60600:1,60607:1,60634:1,60644:7,60649:1,60650:1,60663:7,60766:4,60818:2,60826:2,60858:1,60887:1,60920:1,61042:1,61043:2,61071:2,61104:4,61126:3,61138:1,61149:1,61161:1,61243:1,61253:1,61332:2,61340:2,61346:2,61380:2,61383:1,61419:3,61481:1,61500:2,61575:1,61586:3,61594:1,61604:4,61608:1,61644:3,61699:1,61741:1,61749:1,61750:2,61755:2,61810:1,61841:1,61843:1,61851:2,61877:1,61933:1,61974:1,62004:1,62006:1,62020:1,62091:1,62165:5,62168:1,62182:1,62284:2,62290:5,62302:1,62355:1,62405:1,62444:1,62476:5,62545:3,62564:1,62565:1,62591:1,62610:1,62645:1,62690:1,62708:1,62710:1,62715:4,62725:1,62730:1,62737:1,62766:1,62877:1,62886:3,62960:7,63010:1,63067:1,63102:1,63110:1,63121:1,63142:1,63220:1,63260:1,63271:1,63277:1,63281:2,63322:2,63409:3,63530:1,63545:2,63587:1,63592:2,63712:1,63721:2,63745:1,63808:1,63830:1,63836:4,63851:3,63859:1,63887:1,63916:6,63949:1,63992:4,64001:1,64097:1,64139:1,64159:1,64185:1,64211:1,64227:2,64248:2,64293:2,64318:1,64366:5,64372:2,64381:1,64436:4,64461:1,64466:1,64472:3,64526:3,64544:1,64615:3,64723:1,64732:2,64780:1,64810:2,64912:1,64981:2,65003:1,65013:1,65043:1,65046:2,65139:1,65187:2,65227:4,65231:1,65277:2,65332:1,65354:1,65356:1,65511:1,65514:1,65575:4,65594:2,65602:6,65609:3,65626:6,65663:1,65670:1,65714:1,65741:1,65845:1,65872:2,65874:4,65931:3,65950:2,65955:1,65984:1,66036:1,66045:2,66067:1,66072:1,66076:2,66195:1,66234:1,66258:2,66271:2,66316:1,66339:1,66407:1,66458:1,66472:2,66490:3,66555:2,66571:1,66578:2,66591:1,66626:2,66642:1,66653:1,66759:1,66766:3,66773:1,66802:1,66806:2,66821:1,66828:3,66841:1,66912:1,66931:1,66966:1,66970:1,66984:2,66990:1,67014:2,67032:1,67067:2,67141:1,67150:1,67157:1,67210:5,67230:2,67236:3,67239:1,67241:1,67244:2,67251:3,67276:2,67289:1,67298:3,67331:1,67354:2,67368:2,67419:1,67437:2,67498:1,67579:1,67593:1,67732:1,67799:7,67843:1,67928:1,67953:2,67991:1,68020:1,68054:1,68068:3,68197:1,68204:1,68227:1,68237:2,68243:1,68247:2,68250:1,68254:3,68274:1,68312:3,68329:1,68343:1,68353:2,68374:1,68456:1,68531:1,68555:3,68568:1,68582:1,68595:1,68828:3,68832:1,68837:1,68885:1,68902:1,68933:1,68936:2,68954:1,68961:1,69010:1,69013:2,69017:3,69036:1,69089:1,69093:1,69094:1,69140:2,69149:1,69157:1,69192:1,69270:1,69289:1,69303:1,69323:1,69469:1,69495:1,69514:7,69515:1,69535:1,69543:1,69671:2,69681:1,69717:2,69759:1,69772:1,69791:5,69822:3,69879:1,69887:1,69891:1,69894:2,69905:1,69924:1,69985:3,70022:1,70041:1,70056:1,70060:2,70067:3,70079:1,70118:1,70140:1,70142:1,70174:4,70183:2,70201:5,70203:1,70205:1,70215:1,70219:1,70237:4,70258:1,70316:1,70324:1,70338:3,70345:1,70371:3,70413:5,70456:2,70460:4,70466:1,70505:3,70548:2,70660:2,70664:2,70706:1,70735:4,70768:5,70823:2,70853:2,70864:1,70879:3,70911:1,70917:1,70926:2,71007:1,71026:2,71103:3 372 651 1.750 1.000 4 TCGA:I 14770072 chr17 43026048 43047144 21097 + 0 GT AG aC19,cG19,cG38,gC19,gC38,kG19,kG38,mG19,mG38,rG19,rG38,sG19,sG38 0 ,59855:1,60150:1,60644:1,61369:1,62936:2,62960:1,63598:1,65297:1,65872:1,65888:1,67680:1,68254:1 12 13 1.083 1.000 4 TCGA:I 14770073 chr17 43026048 43138656 112609 + 0 GT AG aC19,cG19,cG38,gC19,gC38,kG19,kG38,mG19,mG38,rG19,rG38,sG19,sG38 aC19,gC19,gC38,kG19,rG19,rG38,sG19,sG38,vG19 ,59907:1,67150:1 2 2 1.000 1.000 4 TCGA:I 14770078 chr17 43026129 43047120 20992 + 0 GT AG 0 0 ,60049:1,60237:1,60421:1,60560:1,60598:1,60644:1,61712:1,62165:1,62314:1,62476:1,63721:1,63992:1,66490:1,66600:1,66759:1,67737:1,68254:1,69013:1,69017:1,69261:1,69535:1,69791:1,70466:1,70706:1 24 24 1.000 1.000 4 TCGA:I 14770082 chr17 43026432 43072169 45738 - 0 GT AG 0 0 ,67733:1 1 1 1.000 1.000 4 TCGA:I 14770083 chr17 43026437 43072174 45738 + 0 GT AG 0 0 ,67733:1 1 1 1.000 1.000 4 TCGA:I 14770086 chr17 43026579 43439378 412800 + 0 GC AG 0 0 ,65027:1 1 1 1.000 1.000 4 TCGA:I 14770087 chr17 43026741 43191453 164713 + 0 GT AG 0 0 ,63966:1 1 1 1.000 1.000 4 TCGA:I 14770088 chr17 43026802 43372134 345333 + 0 AT AC 0 0 ,67283:1 1 1 1.000 1.000 4 TCGA:I 14770105 chr17 43027217 43147875 120659 - 0 GC AG 0 0 ,67890:1 1 1 1.000 1.000 4 TCGA:I 14770131 chr17 43027293 43046418 19126 + 0 GT AG aC19,cG19,cG38,gC19,gC38,kG19,kG38,mG19,mG38,rG19,rG38,sG19,sG38 0 ,68595:1 1 1 1.000 1.000 4 TCGA:I 14770132 chr17 43027293 43047120 19828 + 0 GT AG aC19,cG19,cG38,gC19,gC38,kG19,kG38,mG19,mG38,rG19,rG38,sG19,sG38 0 ,60003:1,60499:1,61071:1,61346:1,62621:2,62645:1,62725:1,63293:1,63671:2,64175:1,64372:1,65602:1,67067:1,67276:2,68377:1,70004:1,70056:1 17 20 1.176 1.000 4 TCGA:I 14770133 chr17 43027293 43071046 43754 + 0 GT AG aC19,cG19,cG38,gC19,gC38,kG19,kG38,mG19,mG38,rG19,rG38,sG19,sG38 0 ,68254:1 1 1 1.000 1.000 4 TCGA:I 14770158 chr17 43028100 43146865 118766 + 0 GT AG 0 0 ,62006:1,63268:1,65728:1,68374:1,68887:1 5 5 1.000 1.000 4 TCGA:I 14770197 chr17 43028196 43046418 18223 + 0 GT AG aC19,cG19,cG38,gC19,gC38,kG19,kG38,mG19,mG38,rG19,rG38,sG19,sG38 0 ,60644:1,60656:1,60804:1,61933:1,62476:1,63721:1,64049:1,64445:1,66490:1,66917:1,66966:1,68224:1,68828:2,69013:1,69822:1,70338:1 16 17 1.062 1.000 4 TCGA:I 14770198 chr17 43028196 43046890 18695 + 0 GT AG aC19,cG19,cG38,gC19,gC38,kG19,kG38,mG19,mG38,rG19,rG38,sG19,sG38 0 ,66230:1 1 1 1.000 1.000 4 TCGA:I 14770199 chr17 43028196 43047120 18925 + 0 GT AG aC19,cG19,cG38,gC19,gC38,kG19,kG38,mG19,mG38,rG19,rG38,sG19,sG38 0 ,59770:1,59901:2,59951:1,59981:1,60080:1,60118:1,60126:1,60157:1,60262:1,60366:1,60484:1,60488:1,60517:2,60533:1,60607:1,60644:2,60663:3,60664:1,60681:1,60682:1,60714:1,60753:1,60766:2,60815:1,60821:1,60914:1,60919:1,60920:2,60979:1,61071:1,61108:1,61110:1,61126:1,61167:1,61229:1,61303:1,61332:1,61392:1,61419:1,61450:1,61458:1,61489:1,61500:2,61510:1,61531:1,61587:1,61604:2,61644:2,61690:1,61708:2,61750:2,61810:1,61838:2,61843:3,61863:1,61877:2,61933:1,61956:1,62075:1,62095:1,62114:1,62165:3,62219:1,62286:1,62287:1,62300:1,62405:3,62410:1,62412:2,62463:1,62476:1,62509:2,62523:1,62541:1,62559:1,62575:1,62610:3,62645:2,62710:1,62714:1,62794:1,62803:1,62805:2,62823:1,62838:1,62926:1,62948:1,62960:7,63067:2,63220:1,63271:3,63293:1,63322:1,63379:1,63394:1,63409:1,63453:5,63530:2,63545:1,63592:1,63712:2,63745:1,63842:2,63849:1,63851:3,63859:1,63916:2,63929:1,63930:1,63934:2,63949:1,63961:1,63971:3,64010:1,64026:1,64051:1,64065:1,64075:1,64097:1,64125:1,64139:2,64212:1,64279:1,64340:1,64372:1,64429:1,64436:1,64472:4,64504:1,64573:1,64723:3,64810:1,64886:1,64961:1,64991:2,65103:1,65173:1,65277:2,65337:1,65354:1,65356:1,65565:1,65602:1,65615:1,65709:1,65712:1,65761:1,65805:1,65833:1,65854:1,65872:1,65874:4,65894:1,65896:1,65931:1,66002:1,66036:2,66039:1,66112:1,66196:1,66234:2,66258:1,66263:1,66407:1,66490:5,66497:1,66642:2,66759:2,66990:1,67014:5,67032:1,67049:1,67067:2,67074:1,67098:1,67126:2,67141:1,67210:1,67236:3,67239:1,67244:1,67251:2,67289:1,67312:1,67331:1,67334:1,67397:1,67407:1,67417:1,67483:1,67579:2,67585:5,67632:1,67638:1,67662:1,67663:2,67737:2,67783:1,67799:3,67836:1,67843:1,67890:1,67919:2,67953:2,67991:1,68022:1,68040:3,68050:2,68068:1,68076:1,68132:1,68224:1,68250:1,68254:1,68353:1,68374:2,68377:2,68390:1,68411:1,68415:1,68432:1,68455:1,68456:2,68531:1,68541:1,68548:2,68555:1,68591:1,68595:1,68604:4,68730:1,68804:1,68828:5,68832:1,68880:1,68885:1,68891:1,68932:3,68954:3,69013:1,69089:1,69128:2,69149:2,69193:1,69196:1,69232:1,69249:1,69270:1,69336:1,69382:1,69452:1,69469:4,69480:1,69514:3,69526:2,69623:1,69671:2,69750:1,69791:1,69813:1,69985:1,70014:1,70030:1,70041:2,70059:1,70156:2,70174:1,70190:1,70205:1,70237:2,70258:1,70338:1,70413:3,70424:1,70446:1,70460:1,70505:3,70537:1,70542:1,70588:1,70634:1,70664:2,70706:2,70729:1,70735:1,70768:1,70772:1,70773:1,70808:1,70809:1,70853:1,70911:2,70933:1,71026:3,71027:1,71103:2 296 423 1.429 1.000 4 TCGA:I 14770200 chr17 43028196 43047144 18949 + 0 GT AG aC19,cG19,cG38,gC19,gC38,kG19,kG38,mG19,mG38,rG19,rG38,sG19,sG38 0 ,59928:1,60049:1,61487:1,62083:1,62476:1,63281:1,63934:1,65615:1,66931:1,67475:1,68224:1,68456:1,68828:1,68954:1,69270:1,69495:1,70308:1,70768:1 18 18 1.000 1.000 4 TCGA:I 14770201 chr17 43028196 43071046 42851 + 0 GT AG aC19,cG19,cG38,gC19,gC38,kG19,kG38,mG19,mG38,rG19,rG38,sG19,sG38 0 ,60573:1,62331:1,62952:1,63830:1,67239:1,70706:1 6 6 1.000 1.000 4 TCGA:I 14770202 chr17 43028196 43082437 54242 + 0 GT AG aC19,cG19,cG38,gC19,gC38,kG19,kG38,mG19,mG38,rG19,rG38,sG19,sG38 0 ,60488:1 1 1 1.000 1.000 4 TCGA:I 14770203 chr17 43028196 43131207 103012 + 0 GT AG aC19,cG19,cG38,gC19,gC38,kG19,kG38,mG19,mG38,rG19,rG38,sG19,sG38 aC19,gC19,gC38,kG19,rG19,rG38,sG19,sG38,vG19 ,66046:1 1 1 1.000 1.000 4 TCGA:I 14770204 chr17 43028196 43323468 295273 + 0 GT AG aC19,cG19,cG38,gC19,gC38,kG19,kG38,mG19,mG38,rG19,rG38,sG19,sG38 0 ,68878:2 1 2 2.000 2.000 4 TCGA:I 14770235 chr17 43028453 43047120 18668 + 0 GT AG 0 0 ,62405:2,65931:1,69700:1 3 4 1.333 1.000 4 TCGA:I 14770285 chr17 43028606 43045661 17056 - 0 GT AG 0 0 ,60769:1,61392:1,68473:1 3 3 1.000 1.000 4 TCGA:I 14770286 chr17 43028606 43047642 19037 - 0 GT AG 0 aC19,cG19,cG38,gC19,gC38,kG19,kG38,mG19,mG38,rG19,rG38,sG19,sG38,vG19 ,62548:1 1 1 1.000 1.000 4 TCGA:I 14770309 chr17 43028677 43046418 17742 + 0 GT AG aC19,sG19,sG38 0 ,60049:4,61933:1,62165:2,62510:1,65386:2,65602:1,68377:1,68828:1,69579:1,69671:1,70338:1,70413:1 12 17 1.417 1.000 4 TCGA:I 14770310 chr17 43028677 43047120 18444 + 0 GT AG aC19,sG19,sG38 0 ,59806:1,59994:2,60049:2,60062:1,60168:1,60598:1,60631:1,60644:1,61071:1,61229:1,61332:1,61419:1,61750:1,61810:1,61921:1,61948:1,62412:1,62740:1,62983:1,63098:1,63220:1,63281:1,63328:1,63530:2,63587:1,63622:1,63712:1,63745:1,63809:1,63836:1,63957:1,63992:1,64058:1,64139:1,64212:1,64420:2,64651:1,64723:1,64882:1,64987:1,65602:1,65633:1,65814:2,65854:1,65894:1,65931:2,66759:1,66802:1,66837:1,66841:1,67244:1,67407:1,67737:2,67793:1,67893:2,67900:1,68068:1,68182:1,68254:2,68390:2,68482:1,68529:1,68555:1,68640:1,68828:1,68832:1,69535:1,69671:2,69791:1,69822:1,69927:1,70060:1,70338:1,70371:1,70373:1,70460:2,70937:1 77 89 1.156 1.000 4 TCGA:I 14770311 chr17 43028677 43047144 18468 + 0 GT AG aC19,sG19,sG38 0 ,60823:1,61510:1,62165:1,63220:1,63394:1,63528:1,64856:1,65894:1,66766:1,66802:1,67843:1,68076:1,68254:1,68353:1,70156:1,70853:1 16 16 1.000 1.000 4 TCGA:I 14770312 chr17 43028677 43063913 35237 + 0 GT AG aC19,sG19,sG38 0 ,71026:1 1 1 1.000 1.000 4 TCGA:I 14770313 chr17 43028677 43121709 93033 + 0 GT AG aC19,sG19,sG38 0 ,70324:2 1 2 2.000 2.000 4 TCGA:I 14770314 chr17 43028677 43182808 154132 - 0 AT AC aC19,sG19,sG38 0 ,60157:1,60659:1,61547:1,64585:1,65728:1,67098:1,69671:1 7 7 1.000 1.000 4 TCGA:I 14770320 chr17 43028685 43045661 16977 - 0 GT AG 0 0 ,60769:1,63464:1,65744:1,66957:1,67401:1,68164:1,68700:1 7 7 1.000 1.000 4 TCGA:I 14770321 chr17 43028685 43047642 18958 - 0 GT AG 0 aC19,cG19,cG38,gC19,gC38,kG19,kG38,mG19,mG38,rG19,rG38,sG19,sG38,vG19 ,62091:1,62448:1,63110:1,68531:1,69261:1 5 5 1.000 1.000 4 TCGA:I 14770322 chr17 43028685 43049120 20436 - 0 GT AG 0 aC19,cG19,cG38,gC19,gC38,kG19,kG38,mG19,mG38,rG19,rG38,sG19,sG38,vG19 ,61566:1,62292:1,65137:1,69465:1 4 4 1.000 1.000 4 TCGA:I 14770345 chr17 43028760 43275752 246993 - 0 GT AG 0 0 ,67928:1 1 1 1.000 1.000 4 TCGA:I 14770403 chr17 43028965 43381844 352880 - 0 GC AG 0 0 ,62591:1,68455:1 2 2 1.000 1.000 4 TCGA:I 14770421 chr17 43029059 43059830 30772 - 0 GT AG 0 0 ,60437:1,60499:1,60524:1,60580:1,61104:1,62083:3,62545:1,63067:1,63257:1,63677:1,64482:1,65231:1,65247:1,65894:1,65970:1,66406:1,66949:1,67289:1,67334:1,67469:2,67710:1,68592:1,68791:2,68814:1,69089:1,69617:2,69795:1,69940:1,70014:1,70371:1,71064:1 31 36 1.161 1.000 4 TCGA:I 14770430 chr17 43029102 43084898 55797 + 0 AT AC 0 0 ,59942:1,60402:1,60766:1,61273:1,61489:1,61644:1,61682:1,61704:2,61708:1,61838:1,62075:1,62083:4,62114:2,64197:1,64348:1,64885:1,65189:1,65232:1,65378:1,66280:1,66472:1,66630:1,66779:1,66785:1,66949:1,66990:1,67008:1,67013:1,67107:1,67244:1,67566:1,68037:1,68054:1,68250:1,68374:1,68490:1,68522:1,68887:1,69044:2,69190:1,69249:1,69459:1,69680:1,69681:1,69691:1,69750:1,69791:1,69905:1,70068:1,70661:1,71026:1 51 57 1.118 1.000 4 TCGA:I 14770433 chr17 43029109 43084905 55797 - 0 GT AG 0 0 ,59942:1,60402:1,60766:1,61273:1,61644:1,61682:1,61704:2,61708:1,61838:1,62075:1,62083:4,62114:2,64197:1,64348:1,64885:1,65189:1,65232:1,65378:1,66280:1,66779:1,66785:1,66949:1,66990:1,67008:1,67013:1,67244:1,67566:1,68037:1,68250:1,68374:1,68490:1,68522:1,68887:1,69044:2,69249:1,69459:1,69680:1,69681:1,69691:1,69750:1,69791:1,69905:1,70068:1,70661:1,71026:1 45 51 1.133 1.000 4 TCGA:I 14770459 chr17 43029620 43045081 15462 + 0 GC AG 0 0 ,67236:1 1 1 1.000 1.000 4 TCGA:I 14770464 chr17 43029665 43505178 475514 + 0 GT AG 0 0 ,59788:1,59871:2,59914:3,59922:2,59934:1,59994:3,59998:1,60186:1,60645:1,60678:1,60692:2,60894:1,60970:2,61144:2,61200:3,61270:2,61437:2,61444:1,61450:2,61561:1,61640:3,61974:1,62016:1,62044:2,62137:3,62171:2,62208:1,62236:1,62260:1,62439:2,62455:2,62489:1,62494:2,62735:2,62750:1,62897:1,62975:1,63158:4,63179:2,63180:1,63186:3,63339:1,63488:1,63670:2,63836:1,63915:2,63990:1,64052:2,64071:2,64143:1,64188:1,64398:1,64420:1,64496:1,64510:2,64653:2,64656:1,64759:1,64965:2,65039:3,65208:1,65550:1,65588:1,65639:2,65777:1,65944:2,66069:2,66083:1,66123:2,66141:1,66298:2,66493:3,66497:1,66524:1,66647:1,66877:1,66899:2,66904:1,67130:1,67192:2,67272:2,67355:1,67441:1,67583:1,67585:2,67641:1,67717:2,67800:1,67806:1,68010:1,68040:9,68069:1,68149:3,68185:1,68400:2,68407:1,68583:2,68705:1,68729:1,68949:1,69096:2,69114:1,69116:2,69162:1,69260:1,69269:1,69316:2,69353:2,69366:1,69376:1,69378:1,69533:1,69793:2,69854:2,69978:2,70176:2,70301:2,70391:1,70480:1,70878:4 120 195 1.625 1.000 4 TCGA:I 14770466 chr17 43029769 43433272 403504 - 0 GC AG 0 0 ,62791:1,69891:1 2 2 1.000 1.000 4 TCGA:I 14770471 chr17 43029827 43433321 403495 - 0 GT AG 0 0 ,67433:2 1 2 2.000 2.000 4 TCGA:I 14770472 chr17 43029834 43433328 403495 + 0 GC AG 0 0 ,67433:2 1 2 2.000 2.000 4 TCGA:I 14770474 chr17 43029950 43363772 333823 + 0 AT AC 0 0 ,64369:1,67242:1,68720:1 3 3 1.000 1.000 4 TCGA:I 14770478 chr17 43029992 43047120 17129 + 0 GT AG 0 0 ,60607:1,63054:1,64723:1,66806:1,67799:1,69295:1,69515:1 7 7 1.000 1.000 4 TCGA:I 14770480 chr17 43030085 43525120 495036 + 0 AT AC 0 0 ,62795:1 1 1 1.000 1.000 4 TCGA:I 14770483 chr17 43030157 43199028 168872 + 0 GT AG 0 0 ,61195:1 1 1 1.000 1.000 4 TCGA:I 14770489 chr17 43030284 43201202 170919 - 0 GT AG 0 0 ,66274:1 1 1 1.000 1.000 4 TCGA:I 14770492 chr17 43030391 43418154 387764 - 0 GT AG 0 0 ,60062:1,61229:1,62081:1,62710:1,63721:1,64051:1,64179:1,65741:1,68865:1,69586:1,70371:1,70390:1,70548:1,70964:1 14 14 1.000 1.000 4 TCGA:I 14770493 chr17 43030391 43418526 388136 - 0 GT AG 0 0 ,65145:1 1 1 1.000 1.000 4 TCGA:I 14770514 chr17 43030986 43514081 483096 - 0 GT AG 0 0 ,70866:1 1 1 1.000 1.000 4 TCGA:I 14770517 chr17 43031043 43073118 42076 + 0 GC AG 0 0 ,61403:1,62955:1 2 2 1.000 1.000 4 TCGA:I 14770518 chr17 43031043 43080730 49688 + 0 GC AG 0 0 ,60656:1,63592:1,68961:1,70085:1,70582:1 5 5 1.000 1.000 4 TCGA:I 14770519 chr17 43031177 43528002 496826 + 0 GT AG 0 0 ,70029:1 1 1 1.000 1.000 4 TCGA:I 14770530 chr17 43031821 43346642 314822 - 0 GC AG 0 0 ,69217:1 1 1 1.000 1.000 4 TCGA:I 14770533 chr17 43031961 43047642 15682 - 0 GT AG 0 aC19,cG19,cG38,gC19,gC38,kG19,kG38,mG19,mG38,rG19,rG38,sG19,sG38,vG19 ,66187:1 1 1 1.000 1.000 4 TCGA:I 14770538 chr17 43032269 43236873 204605 + 0 GT AG 0 0 ,61617:1 1 1 1.000 1.000 4 TCGA:I 14770543 chr17 43032479 43050398 17920 + 0 GT AG 0 0 ,64297:1 1 1 1.000 1.000 4 TCGA:I 14770555 chr17 43032653 43429256 396604 + 0 GC AG 0 0 ,66213:1 1 1 1.000 1.000 4 TCGA:I 14770557 chr17 43032674 43515351 482678 - 0 GT AG 0 0 ,61656:1,63797:1,67642:1 3 3 1.000 1.000 4 TCGA:I 14770562 chr17 43032850 43046442 13593 + 0 GC AG 0 0 ,59834:1 1 1 1.000 1.000 4 TCGA:I 14770563 chr17 43032900 43160136 127237 + 0 GT AG 0 0 ,69624:1 1 1 1.000 1.000 4 TCGA:I 14770566 chr17 43032948 43443643 410696 + 0 GC AG 0 0 ,64990:1,66931:1 2 2 1.000 1.000 4 TCGA:I 14770568 chr17 43032964 43192662 159699 - 0 GC AG 0 0 ,66769:1 1 1 1.000 1.000 4 TCGA:I 14770569 chr17 43032964 43501642 468679 - 0 GC AG 0 0 ,61645:1 1 1 1.000 1.000 4 TCGA:I 14770576 chr17 43033353 43061829 28477 - 0 GT AG 0 0 ,61138:2,62131:1,64139:1 3 4 1.333 1.000 4 TCGA:I 14770578 chr17 43033357 43061833 28477 - 0 GC AG 0 0 ,61138:2,62131:1,64139:1 3 4 1.333 1.000 4 TCGA:I 14770579 chr17 43033363 43061839 28477 - 0 GC AG 0 0 ,61138:2,62131:1 2 3 1.500 1.500 4 TCGA:I 14770582 chr17 43033786 43373772 339987 - 0 GC AG 0 0 ,63203:1 1 1 1.000 1.000 4 TCGA:I 14770584 chr17 43034036 43052306 18271 + 0 GT AG 0 0 ,64132:1 1 1 1.000 1.000 4 TCGA:I 14770587 chr17 43034159 43045661 11503 - 0 GT AG 0 0 ,66484:1,67899:1 2 2 1.000 1.000 4 TCGA:I 14770588 chr17 43034159 43047642 13484 - 0 GT AG 0 aC19,cG19,cG38,gC19,gC38,kG19,kG38,mG19,mG38,rG19,rG38,sG19,sG38,vG19 ,66775:1 1 1 1.000 1.000 4 TCGA:I 14770589 chr17 43034168 43528234 494067 + 0 GT AG 0 0 ,68429:1 1 1 1.000 1.000 4 TCGA:I 14770590 chr17 43034208 43508475 474268 + 0 GC AG 0 0 ,70204:1 1 1 1.000 1.000 4 TCGA:I 14770592 chr17 43034753 43128253 93501 - 0 AT AC 0 0 ,65385:1 1 1 1.000 1.000 4 TCGA:I 14770595 chr17 43035308 43489485 454178 - 0 GT AG 0 0 ,64360:1 1 1 1.000 1.000 4 TCGA:I 14770599 chr17 43035623 43047343 11721 - 0 GT AG 0 0 ,63537:2 1 2 2.000 2.000 4 TCGA:I 14770600 chr17 43035623 43426551 390929 - 0 GC AG 0 0 ,64219:1,66192:1,66710:1 3 3 1.000 1.000 4 TCGA:I 14770601 chr17 43035632 43426560 390929 + 0 AT AC 0 0 ,64219:1,66192:1,66710:1 3 3 1.000 1.000 4 TCGA:I 14770602 chr17 43035643 43045661 10019 - 0 GT AG 0 0 ,60319:1,69151:1 2 2 1.000 1.000 4 TCGA:I 14770603 chr17 43035643 43047642 12000 - 0 GT AG 0 aC19,cG19,cG38,gC19,gC38,kG19,kG38,mG19,mG38,rG19,rG38,sG19,sG38,vG19 ,67155:1 1 1 1.000 1.000 4 TCGA:I 14770606 chr17 43035649 43045661 10013 - 0 GT AG 0 0 ,59776:3,59900:1,59998:1,60071:1,60113:1,60186:1,60319:1,60392:1,60491:1,60519:1,60603:1,60644:1,60663:1,60712:1,60726:1,60736:1,60973:1,61100:1,61156:2,61360:1,61595:1,61597:1,61637:1,61688:2,61766:1,61798:1,61799:1,61921:2,61946:1,62135:2,62281:1,62358:1,62469:1,62582:1,62607:1,62622:2,62735:2,62780:1,62859:1,62947:2,63140:1,63151:1,63219:1,63370:1,63532:1,63632:1,63698:1,63706:1,63776:1,63844:1,63921:2,64083:1,64148:1,64179:1,64420:1,64640:1,64669:2,64691:1,64775:1,64810:1,64970:1,64976:2,65102:1,65139:1,65322:1,65339:1,65385:2,65386:1,65442:1,65450:1,65451:1,65544:1,65663:1,65790:1,65894:1,66039:1,66084:2,66157:1,66162:1,66181:1,66182:1,66317:1,66345:1,66432:1,66452:1,66611:1,66634:2,66637:1,66800:1,66827:1,66864:1,66866:1,67222:1,67240:1,67358:1,67394:1,67402:3,67493:1,67504:1,67635:1,67762:1,67791:1,67884:1,68286:1,68307:2,68477:1,68520:3,68602:1,68643:1,68673:1,68719:1,68721:1,68731:1,68744:1,68758:1,68783:1,68785:1,68810:2,68818:1,68830:1,68913:1,68939:1,69144:1,69148:1,69252:1,69300:1,69361:1,69367:1,69487:1,69505:1,69559:1,69663:1,69708:1,69731:1,69758:1,69761:1,69852:1,69934:1,70081:1,70084:1,70162:1,70182:1,70310:1,70357:1,70372:2,70457:1,70499:3,70580:1,70618:1,70812:1,70813:1,70904:1,70949:1,71034:1,71069:1 155 179 1.155 1.000 4 TCGA:I 14770607 chr17 43035649 43047642 11994 - 0 GT AG 0 aC19,cG19,cG38,gC19,gC38,kG19,kG38,mG19,mG38,rG19,rG38,sG19,sG38,vG19 ,59799:2,59891:2,59926:1,59972:2,60187:1,60234:2,60296:1,60540:2,60576:1,60645:1,60679:2,60683:1,60967:1,61009:1,61033:1,61073:1,61096:1,61390:1,61423:2,61442:1,61533:1,61561:1,61595:1,61974:1,62068:1,62545:1,62562:2,62599:2,62603:1,62690:1,62731:1,62745:1,62768:1,62843:1,63293:1,63312:1,63383:1,63546:1,63666:2,63953:1,64050:1,64175:1,64271:2,64461:1,64489:1,64656:2,64852:1,64976:2,65016:1,65026:1,65049:1,65223:1,65230:1,65497:1,65511:1,65615:1,65895:1,65904:1,66156:1,66447:1,66478:1,66496:1,66514:1,66546:1,66583:1,67036:1,67155:2,67173:1,67180:1,67468:1,67497:2,67516:1,67565:1,67592:1,67680:1,67732:1,67781:1,67841:1,67869:2,67904:1,68075:2,68114:1,68313:1,68327:1,68346:1,68435:1,68530:1,68542:1,68576:1,68637:1,68748:1,68827:1,68837:2,69093:1,69207:2,69356:1,69511:1,69517:2,69812:1,69880:1,69924:1,69989:1,69996:1,70124:1,70251:1,70273:1,70310:1,70335:1,70618:1,70833:1 110 130 1.182 1.000 4 TCGA:I 14770608 chr17 43035649 43049120 13472 - 0 GT AG 0 aC19,cG19,cG38,gC19,gC38,kG19,kG38,mG19,mG38,rG19,rG38,sG19,sG38,vG19 ,59976:1,60669:2,61282:1,62789:1,63218:1,63364:1,63637:1,64447:1,66341:1,67546:1,67560:1,67844:1,68306:1,69254:1,69480:1 15 16 1.067 1.000 4 TCGA:I 14770609 chr17 43035649 43067607 31959 - 0 GT AG 0 aC19,cG19,cG38,gC19,gC38,kG19,kG38,mG19,mG38,rG19,rG38,sG19,sG38,vG19 ,68822:1 1 1 1.000 1.000 4 TCGA:I 14770612 chr17 43035853 43500030 464178 + 0 GC AG 0 0 ,61105:1,70502:1 2 2 1.000 1.000 4 TCGA:I 14770614 chr17 43036029 43044917 8889 - 0 GC AG 0 0 ,61890:1 1 1 1.000 1.000 4 TCGA:I 14770615 chr17 43036029 43511942 475914 - 0 GC AG 0 0 ,60854:1,63383:1,63751:1,64342:1,66517:1,67782:1,68001:1 7 7 1.000 1.000 4 TCGA:I 14770616 chr17 43036036 43511949 475914 + 0 GT AG 0 0 ,60854:1,63383:1,63751:1,64342:1,66517:1,67782:1,68001:1 7 7 1.000 1.000 4 TCGA:I 14770617 chr17 43036042 43046442 10401 + 0 GT AG 0 0 ,67782:1 1 1 1.000 1.000 4 TCGA:I 14770618 chr17 43036202 43210749 174548 - 0 GT AG 0 0 ,70845:1 1 1 1.000 1.000 4 TCGA:I 14770619 chr17 43036369 43047399 11031 - 0 GC AG 0 0 ,62978:1 1 1 1.000 1.000 4 TCGA:I 14770620 chr17 43036416 43045661 9246 - 0 GT AG 0 0 ,60010:1,60022:1,60106:1,60501:1,60571:1,60810:1,61010:1,61275:2,61436:1,61461:1,62018:1,62066:1,62098:1,62376:1,62380:1,62387:1,62405:1,62854:1,62929:1,63347:2,63363:1,63556:1,63596:1,63647:1,64714:1,64976:1,65040:1,65859:2,66048:1,66213:2,66411:1,66840:1,66903:2,66919:1,67466:1,67671:1,67724:2,68015:1,68244:1,68356:1,68369:1,68427:1,68542:1,68824:1,69413:1,69461:1,69902:1,69909:1,69984:1,70666:1,70846:1 51 57 1.118 1.000 4 TCGA:I 14770621 chr17 43036416 43047642 11227 - 0 GT AG 0 aC19,cG19,cG38,gC19,gC38,kG19,kG38,mG19,mG38,rG19,rG38,sG19,sG38,vG19 ,59991:1,60148:1,60187:1,60723:1,60781:1,61396:2,61750:1,62436:1,62458:1,62667:1,62881:1,63130:1,63266:1,63906:1,64025:2,64043:1,64144:1,64386:1,64477:1,64740:1,65057:1,65300:1,65317:1,65562:1,65644:1,65650:1,65842:1,65923:2,65983:1,66509:1,66866:1,67095:1,67183:1,67474:1,67727:1,67883:1,68176:1,68359:1,69111:1,69116:1,69419:1,69606:1,69766:1,70058:1,70124:1,70812:1 46 49 1.065 1.000 4 TCGA:I 14770622 chr17 43036416 43049120 12705 - 0 GT AG 0 aC19,cG19,cG38,gC19,gC38,kG19,kG38,mG19,mG38,rG19,rG38,sG19,sG38,vG19 ,65200:1 1 1 1.000 1.000 4 TCGA:I 14770623 chr17 43036416 43051062 14647 - 0 GT AG 0 aC19,cG19,cG38,gC19,gC38,kG19,kG38,mG19,mG38,rG19,rG38,sG19,sG38,vG19 ,64624:1 1 1 1.000 1.000 4 TCGA:I 14770628 chr17 43037319 43456187 418869 + 0 GT AG 0 0 ,61725:1 1 1 1.000 1.000 4 TCGA:I 14770630 chr17 43037421 43147008 109588 - 0 GC AG 0 0 ,64397:1 1 1 1.000 1.000 4 TCGA:I 14770633 chr17 43037463 43222253 184791 - 0 GT AG 0 0 ,66847:1,67224:1 2 2 1.000 1.000 4 TCGA:I 14770634 chr17 43037495 43414172 376678 - 0 GC AG 0 0 ,66959:1 1 1 1.000 1.000 4 TCGA:I 14770635 chr17 43037619 43199329 161711 - 0 GC AG 0 0 ,70862:1 1 1 1.000 1.000 4 TCGA:I 14770636 chr17 43037672 43521533 483862 + 0 AT AC 0 0 ,66172:1,70639:1 2 2 1.000 1.000 4 TCGA:I 14770638 chr17 43037883 43399836 361954 - 0 GT AG 0 0 ,59838:1,59978:1,60489:1,61260:1,61522:1,61721:1,61779:1,61881:1,63858:1,64277:1,65006:1,65384:1,65408:1,65551:1,67589:1,67684:1,68305:1,68697:1,69134:1,69370:1,70323:1,70442:1 22 22 1.000 1.000 4 TCGA:I 14770641 chr17 43038739 43046256 7518 + 0 GC AG 0 0 ,69167:1 1 1 1.000 1.000 4 TCGA:I 14770642 chr17 43038847 43441019 402173 + 0 GC AG 0 0 ,61643:1,69459:1 2 2 1.000 1.000 4 TCGA:I 14770643 chr17 43038851 43441023 402173 - 0 GC AG 0 0 ,61643:1,69459:1 2 2 1.000 1.000 4 TCGA:I 14770644 chr17 43039210 43047531 8322 - 0 GT AG 0 0 ,65444:1 1 1 1.000 1.000 4 TCGA:I 14770645 chr17 43039428 43217702 178275 + 0 AT AC 0 0 ,66262:1 1 1 1.000 1.000 4 TCGA:I 14770646 chr17 43039620 43400514 360895 + 0 GT AG 0 0 ,62373:1 1 1 1.000 1.000 4 TCGA:I 14770648 chr17 43040170 43407901 367732 + 0 GC AG 0 0 ,61909:1,68489:1,69696:1 3 3 1.000 1.000 4 TCGA:I 14770649 chr17 43040203 43054856 14654 - 0 GC AG 0 0 ,70884:1 1 1 1.000 1.000 4 TCGA:I 14770652 chr17 43040522 43047120 6599 + 0 GT AG 0 0 ,60919:1,61446:1,65933:1,67923:1,68880:1,68931:1,69007:1,69325:1,71090:1 9 9 1.000 1.000 4 TCGA:I 14770653 chr17 43040977 43193790 152814 - 0 AT AC 0 0 ,67165:1 1 1 1.000 1.000 4 TCGA:I 14770655 chr17 43041489 43329098 287610 - 0 GT AG 0 0 ,66609:1 1 1 1.000 1.000 4 TCGA:I 14770656 chr17 43041578 43092259 50682 + 0 GT AG 0 0 ,63153:1 1 1 1.000 1.000 4 TCGA:I 14770659 chr17 43042219 43528023 485805 - 0 GC AG 0 0 ,66572:1 1 1 1.000 1.000 4 TCGA:I 14770660 chr17 43042240 43528023 485784 - 0 GC AG 0 0 ,63339:1 1 1 1.000 1.000 4 TCGA:I 14770661 chr17 43042244 43528027 485784 - 0 GC AG 0 0 ,63339:1 1 1 1.000 1.000 4 TCGA:I 14770662 chr17 43042330 43045167 2838 + 0 AT AC 0 0 ,61387:1 1 1 1.000 1.000 4 TCGA:I 14770663 chr17 43042450 43190606 148157 - 0 GT AG 0 0 ,62836:1 1 1 1.000 1.000 4 TCGA:I 14770664 chr17 43043570 43044445 876 - 0 AT AC 0 0 ,67925:1 1 1 1.000 1.000 4 TCGA:I 14770665 chr17 43043604 43045661 2058 - 0 GT AG 0 0 ,60026:1,60053:1,61435:1,61869:1,63241:1,64189:1,64304:1,65323:1,65585:1,65947:1,66680:1,67185:1,67208:6,67232:1,67335:1,67926:1,68014:1,68217:1,68255:1,69052:1,69702:1,70336:1,70764:1 23 28 1.217 1.000 4 TCGA:I 14770666 chr17 43043604 43047642 4039 - 0 GT AG 0 aC19,cG19,cG38,gC19,gC38,kG19,kG38,mG19,mG38,rG19,rG38,sG19,sG38,vG19 ,63797:1,67208:1 2 2 1.000 1.000 4 TCGA:I 14770667 chr17 43044078 43044707 630 - 0 GT AG 0 0 ,68477:1 1 1 1.000 1.000 4 TCGA:I 14770668 chr17 43044078 43045661 1584 - 0 GT AG 0 0 ,59965:1,59980:1,60078:1,60194:1,60216:1,60301:1,60388:1,60538:1,60659:1,60701:1,60727:1,60921:1,60931:1,61019:1,61071:1,61118:1,61332:1,61375:1,61383:1,61454:1,61568:1,61583:1,61586:1,61695:1,61754:1,61830:1,61873:1,61968:2,62120:1,62155:1,62216:1,62239:1,62344:1,62357:1,62368:1,62377:1,62403:1,62514:1,62525:1,62544:1,62649:1,62708:1,62765:1,62896:1,62933:1,62958:1,63162:1,63305:1,63332:1,63509:1,63516:1,63536:1,63556:1,63579:1,63609:1,63820:1,63917:1,63990:1,64117:1,64124:1,64137:1,64190:1,64198:1,64341:1,64486:1,64528:1,64541:2,64555:1,64568:1,64580:1,64654:1,64681:1,64683:1,64705:1,64751:1,64775:1,64837:1,65013:1,65036:1,65181:1,65204:2,65209:1,65298:2,65309:1,65323:1,65363:1,65496:1,65546:1,65635:1,65638:2,65829:1,65847:1,65884:1,65919:1,66004:2,66108:1,66119:1,66296:1,66404:1,66573:1,66762:1,66776:1,66892:1,66969:1,66991:1,67098:1,67215:1,67316:1,67328:1,67335:1,67410:1,67420:1,67461:1,67497:1,67531:1,67850:1,67857:1,67862:1,67935:1,67960:1,67963:1,68025:1,68122:1,68147:1,68269:1,68286:3,68318:1,68398:1,68475:1,68546:1,68643:2,68696:1,68700:1,68726:1,69002:1,69147:1,69422:1,69425:2,69430:2,69492:2,69600:1,69649:1,69765:2,69827:1,69902:1,69919:1,69924:2,70124:1,70151:1,70417:1,70418:1,70431:2,70455:1,70593:1,70645:1,70689:1,70738:1,70849:1,70979:1 159 174 1.094 1.000 4 TCGA:I 14770669 chr17 43044078 43047642 3565 - 0 GT AG 0 aC19,cG19,cG38,gC19,gC38,kG19,kG38,mG19,mG38,rG19,rG38,sG19,sG38,vG19 ,61414:1,65629:1,66802:1,70330:1 4 4 1.000 1.000 4 TCGA:I 14770670 chr17 43044172 43045134 963 - 0 GC AG 0 0 ,68875:1 1 1 1.000 1.000 4 TCGA:I 14770671 chr17 43044341 43044362 22 + 0 AT AC 0 0 ,67471:1 1 1 1.000 1.000 4 TCGA:I 14770672 chr17 43044354 43044387 34 + 0 AT AC 0 0 ,68595:1 1 1 1.000 1.000 4 TCGA:I 14770673 chr17 43044359 43044763 405 - 0 AT AC 0 0 ,61082:1 1 1 1.000 1.000 4 TCGA:I 14770674 chr17 43044369 43044412 44 + 0 GT AG 0 0 ,61471:2 1 2 2.000 2.000 4 TCGA:I 14770675 chr17 43044369 43093583 49215 - 0 AT AC 0 0 ,60187:2,60769:3 2 5 2.500 2.500 4 TCGA:I 14770676 chr17 43044381 43044408 28 - 0 GT AG 0 0 ,65626:1 1 1 1.000 1.000 4 TCGA:I 14770677 chr17 43044444 43044460 17 + 0 AT AC 0 0 ,63628:1 1 1 1.000 1.000 4 TCGA:I 14770678 chr17 43044448 43045558 1111 - 0 AT AC 0 0 ,60072:1,69912:1 2 2 1.000 1.000 4 TCGA:I 14770679 chr17 43044462 43124016 79555 - 0 GT AG 0 aC19,cG19,cG38,gC19,gC38,kG19,kG38,mG19,mG38,rG19,rG38,sG19,sG38,vG19 ,63894:2 1 2 2.000 2.000 4 TCGA:I 14770680 chr17 43044468 43057086 12619 - 0 GT AG 0 0 ,61409:1 1 1 1.000 1.000 4 TCGA:I 14770681 chr17 43044489 43093311 48823 + 0 AT AC 0 0 ,60031:1 1 1 1.000 1.000 4 TCGA:I 14770682 chr17 43044503 43044516 14 + 0 AT AC 0 0 ,60790:1 1 1 1.000 1.000 4 TCGA:I 14770683 chr17 43044575 43045661 1087 - 0 GT AG 0 0 ,62995:1 1 1 1.000 1.000 4 TCGA:I 14770684 chr17 43044577 43092619 48043 - 0 AT AC 0 0 ,61932:1 1 1 1.000 1.000 4 TCGA:I 14770685 chr17 43044580 43044661 82 + 0 AT AC 0 0 ,62511:1,68413:1 2 2 1.000 1.000 4 TCGA:I 14770686 chr17 43044589 43082460 37872 + 0 AT AC 0 0 ,62962:1 1 1 1.000 1.000 4 TCGA:I 14770687 chr17 43044596 43045167 572 + 0 AT AC 0 0 ,63894:1 1 1 1.000 1.000 4 TCGA:I 14770688 chr17 43044602 43045130 529 + 0 AT AC 0 0 ,65462:1 1 1 1.000 1.000 4 TCGA:I 14770689 chr17 43044611 43044627 17 + 0 GT AG 0 0 ,69003:3 1 3 3.000 3.000 4 TCGA:I 14770690 chr17 43044611 43044647 37 + 0 GT AG 0 0 ,62140:1 1 1 1.000 1.000 4 TCGA:I 14770691 chr17 43044618 43044661 44 + 0 AT AC 0 0 ,63376:1 1 1 1.000 1.000 4 TCGA:I 14770692 chr17 43044639 43092094 47456 + 0 AT AC 0 0 ,61577:1 1 1 1.000 1.000 4 TCGA:I 14770693 chr17 43044647 43044682 36 + 0 GC AG 0 0 ,68313:1 1 1 1.000 1.000 4 TCGA:I 14770694 chr17 43044648 43045661 1014 - 0 GT AG 0 0 ,65525:1 1 1 1.000 1.000 4 TCGA:I 14770695 chr17 43044656 43044668 13 + 0 AT AC 0 0 ,68501:1 1 1 1.000 1.000 4 TCGA:I 14770696 chr17 43044662 43499385 454724 + 0 AT AC 0 0 ,60898:1,61806:1,62304:1,62849:1,63884:1,63963:1,64918:1,65636:1,66715:1,68016:1,68151:1,70359:1 12 12 1.000 1.000 4 TCGA:I 14770697 chr17 43044668 43092844 48177 - 0 GT AG 0 0 ,65091:1 1 1 1.000 1.000 4 TCGA:I 14770698 chr17 43044668 43097257 52590 - 0 GC AG 0 0 ,63921:1 1 1 1.000 1.000 4 TCGA:I 14770699 chr17 43044698 43044774 77 - 0 GT AG 0 0 ,66404:1 1 1 1.000 1.000 4 TCGA:I 14770700 chr17 43044698 43045514 817 - 0 GT AG 0 0 ,68106:1 1 1 1.000 1.000 4 TCGA:I 14770701 chr17 43044722 43044944 223 - 0 GT AG 0 0 ,65496:1 1 1 1.000 1.000 4 TCGA:I 14770702 chr17 43044728 43045661 934 - 0 GT AG 0 0 ,63107:1,70104:1 2 2 1.000 1.000 4 TCGA:I 14770703 chr17 43044730 43045487 758 + 0 GT AG 0 0 ,60661:2 1 2 2.000 2.000 4 TCGA:I 14770704 chr17 43044745 43044774 30 - 0 GT AG 0 0 ,62592:3,68039:1 2 4 2.000 2.000 4 TCGA:I 14770705 chr17 43044753 43044774 22 + 0 AT AC 0 0 ,68106:1 1 1 1.000 1.000 4 TCGA:I 14770706 chr17 43044766 43092040 47275 + 0 AT AC 0 0 ,62050:1 1 1 1.000 1.000 4 TCGA:I 14770707 chr17 43044768 43076537 31770 - 0 GT AG 0 0 ,62800:1 1 1 1.000 1.000 4 TCGA:I 14770708 chr17 43044804 43316221 271418 - 0 GC AG 0 0 ,62276:1,64215:1,66584:1,67367:1,70571:1 5 5 1.000 1.000 4 TCGA:I 14770709 chr17 43044804 43479955 435152 - 0 GT AG 0 0 ,67926:1 1 1 1.000 1.000 4 TCGA:I 14770710 chr17 43044832 43045109 278 + 0 GT AG 0 0 ,65682:1 1 1 1.000 1.000 4 TCGA:I 14770711 chr17 43044834 43045321 488 - 0 GC AG 0 0 ,62309:1,66329:1,67368:1 3 3 1.000 1.000 4 TCGA:I 14770712 chr17 43044834 43063509 18676 - 0 GC AG 0 0 ,60769:1 1 1 1.000 1.000 4 TCGA:I 14770713 chr17 43044838 43067288 22451 - 0 GC AG 0 0 ,70849:1 1 1 1.000 1.000 4 TCGA:I 14770714 chr17 43044849 43046442 1594 + 0 GC AG 0 0 ,63537:1,70232:1 2 2 1.000 1.000 4 TCGA:I 14770715 chr17 43044849 43053262 8414 + 0 GC AG 0 0 ,62521:2 1 2 2.000 2.000 4 TCGA:I 14770716 chr17 43044849 43063875 19027 + 0 GC AG 0 0 ,66889:1,68676:1 2 2 1.000 1.000 4 TCGA:I 14770717 chr17 43044849 43121059 76211 + 0 GC AG 0 0 ,67043:4,69167:1 2 5 2.500 2.500 4 TCGA:I 14770718 chr17 43044874 43121351 76478 + 0 GC AG 0 0 ,61507:1 1 1 1.000 1.000 4 TCGA:I 14770719 chr17 43044875 43044917 43 - 0 GC AG 0 0 ,67261:1 1 1 1.000 1.000 4 TCGA:I 14770720 chr17 43044879 43130388 85510 - 0 GC AG 0 0 ,64252:1 1 1 1.000 1.000 4 TCGA:I 14770721 chr17 43044886 43045223 338 - 0 GC AG 0 0 ,64148:1 1 1 1.000 1.000 4 TCGA:I 14770722 chr17 43044886 43050594 5709 - 0 GT AG 0 0 ,63278:1 1 1 1.000 1.000 4 TCGA:I 14770723 chr17 43044886 43050605 5720 - 0 GT AG 0 0 ,60483:1,65339:1 2 2 1.000 1.000 4 TCGA:I 14770724 chr17 43044886 43071095 26210 - 0 GT AG 0 0 ,64239:1,66212:1 2 2 1.000 1.000 4 TCGA:I 14770725 chr17 43044886 43118458 73573 - 0 GT AG 0 0 ,59795:1,59835:1,59843:1,59861:1,59894:1,59925:1,60017:1,60071:1,60141:1,60155:1,60187:1,60216:1,60267:1,60271:1,60377:1,60392:1,60451:1,60561:1,60624:1,60728:1,61167:1,61281:1,61336:1,61622:1,61824:1,61892:1,62021:1,62102:1,62185:2,62209:1,62295:1,62425:1,62451:1,62489:1,62706:1,62828:1,62829:1,62845:2,62866:1,63020:1,63119:1,63335:1,63339:2,63376:1,63450:1,63480:1,63688:1,63690:2,63695:1,63740:1,63799:1,63819:1,63872:1,63910:1,64085:1,64105:1,64124:1,64234:2,64334:1,64386:1,64612:1,64677:1,64773:1,64845:1,64930:1,65040:1,65102:1,65145:1,65178:1,65190:1,65251:1,65288:1,65323:1,65396:1,65518:1,65545:1,65720:1,65918:1,65959:1,65965:1,66018:1,66064:1,66113:1,66135:1,66215:1,66224:1,66376:1,66500:1,66670:1,66724:1,66973:1,67113:1,67130:1,67132:1,67404:1,67618:1,67620:1,67641:1,67659:1,67762:1,67793:1,67814:1,67975:1,68270:1,68277:1,68288:1,68291:1,68302:1,68393:1,68588:1,68596:1,68642:1,68672:1,68700:1,68805:1,68941:1,69034:1,69167:1,69491:1,69505:1,69619:1,69698:1,69701:1,69757:1,69772:3,69899:1,69937:1,70023:1,70126:1,70204:1,70405:1,70484:1,70516:2,70596:1,70641:2,70686:1,70691:1,70707:1,70857:1,70898:1,71048:1 141 150 1.064 1.000 4 TCGA:I 14770726 chr17 43044886 43200950 156065 - 0 GT AG 0 0 ,62537:1,62766:1,67127:1,70303:1 4 4 1.000 1.000 4 TCGA:I 14770727 chr17 43044886 43376355 331470 - 0 GT AG 0 0 ,66350:1,66884:1 2 2 1.000 1.000 4 TCGA:I 14770728 chr17 43044886 43405069 360184 - 0 GT AG 0 0 ,61817:1 1 1 1.000 1.000 4 TCGA:I 14770729 chr17 43044892 43044926 35 - 0 GT AG 0 0 ,67185:1 1 1 1.000 1.000 4 TCGA:I 14770730 chr17 43044892 43044954 63 - 0 GT AG 0 0 ,59914:1,67460:1 2 2 1.000 1.000 4 TCGA:I 14770731 chr17 43044892 43045762 871 - 0 GT AG 0 0 ,70846:2 1 2 2.000 2.000 4 TCGA:I 14770732 chr17 43044892 43050605 5714 - 0 GT AG 0 0 ,65173:1,65473:1 2 2 1.000 1.000 4 TCGA:I 14770733 chr17 43044892 43051010 6119 - 0 GT AG 0 0 ,67881:1,69413:1 2 2 1.000 1.000 4 TCGA:I 14770734 chr17 43044892 43054001 9110 - 0 GT AG 0 0 ,63188:1 1 1 1.000 1.000 4 TCGA:I 14770735 chr17 43044892 43121074 76183 - 0 GT AG 0 0 ,63166:1 1 1 1.000 1.000 4 TCGA:I 14770736 chr17 43044914 43045130 217 - 0 GT AG 0 0 ,61442:1,68246:1 2 2 1.000 1.000 4 TCGA:I 14770737 chr17 43044914 43051062 6149 - 0 GT AG 0 aC19,cG19,cG38,gC19,gC38,kG19,kG38,mG19,mG38,rG19,rG38,sG19,sG38,vG19 ,62309:3 1 3 3.000 3.000 4 TCGA:I 14770738 chr17 43044918 43045134 217 - 0 GC AG 0 0 ,60661:1,60955:1,61442:1,62658:1,65029:1,65163:1,67553:1 7 7 1.000 1.000 4 TCGA:I 14770739 chr17 43044918 43045256 339 - 0 GC AG 0 0 ,60373:1,66221:1,69012:1 3 3 1.000 1.000 4 TCGA:I 14770740 chr17 43044918 43045661 744 - 0 GT AG 0 0 ,60021:1,61799:2,62623:1,63821:2,64074:1,65688:2,68540:1,69380:1,70153:1 9 12 1.333 1.000 4 TCGA:I 14770741 chr17 43044918 43045723 806 - 0 GC AG 0 0 ,62892:1 1 1 1.000 1.000 4 TCGA:I 14770742 chr17 43044918 43047213 2296 - 0 GT AG 0 aC19 ,62892:1 1 1 1.000 1.000 4 TCGA:I 14770743 chr17 43044918 43050657 5740 - 0 GC AG 0 0 ,61404:1 1 1 1.000 1.000 4 TCGA:I 14770744 chr17 43044918 43091696 46779 - 0 GC AG 0 0 ,63687:1 1 1 1.000 1.000 4 TCGA:I 14770745 chr17 43044934 43045014 81 + 0 GC AG 0 0 ,60515:1 1 1 1.000 1.000 4 TCGA:I 14770746 chr17 43044935 43055823 10889 - 0 GT AG 0 0 ,68089:1 1 1 1.000 1.000 4 TCGA:I 14770747 chr17 43044947 43045081 135 + 0 GT AG 0 0 ,60559:1,60571:1,61336:1,63543:1,63892:1,64497:1,64830:1,64832:1,65537:1,66082:2,66516:1,66632:1,67367:1,67423:1,67434:1,67808:1,68849:1,69590:1,70537:1,70579:1,70970:1,70983:1 22 23 1.045 1.000 4 TCGA:I 14770748 chr17 43044947 43045714 768 + 0 GT AG 0 0 ,69902:1 1 1 1.000 1.000 4 TCGA:I 14770749 chr17 43044947 43046373 1427 + 0 GT AG 0 0 ,59827:1 1 1 1.000 1.000 4 TCGA:I 14770750 chr17 43044947 43368537 323591 + 0 GT AG 0 0 ,66032:1 1 1 1.000 1.000 4 TCGA:I 14770751 chr17 43044949 43045142 194 - 0 AT AC 0 0 ,69382:1 1 1 1.000 1.000 4 TCGA:I 14770752 chr17 43044966 43046392 1427 + 0 GC AG 0 0 ,61217:2 1 2 2.000 2.000 4 TCGA:I 14770753 chr17 43044970 43045079 110 + 0 AT AC 0 0 ,63778:1 1 1 1.000 1.000 4 TCGA:I 14770754 chr17 43044974 43045661 688 - 0 GT AG 0 0 ,61387:1,63152:1,63278:1,63293:1,64353:1,64761:1,65391:1,65662:1,65835:1,66156:1,66578:1,66852:1,67300:1,68212:1,68239:1,68523:1,69125:1,69837:1,70704:1 19 19 1.000 1.000 4 TCGA:I 14770755 chr17 43044974 43053190 8217 - 0 GT AG 0 0 ,69716:1 1 1 1.000 1.000 4 TCGA:I 14770756 chr17 43044976 43045386 411 - 0 AT AC 0 0 ,66212:1 1 1 1.000 1.000 4 TCGA:I 14770757 chr17 43044976 43045558 583 - 0 AT AC 0 0 ,61749:1 1 1 1.000 1.000 4 TCGA:I 14770758 chr17 43044991 43045266 276 + 0 AT AC 0 0 ,61225:1 1 1 1.000 1.000 4 TCGA:I 14770759 chr17 43044996 43045101 106 + 0 GT AG 0 0 ,63464:1,67337:1,68114:2,68260:3,70189:2 5 9 1.800 2.000 4 TCGA:I 14770760 chr17 43044996 43045154 159 - 0 AT AC 0 0 ,63388:1 1 1 1.000 1.000 4 TCGA:I 14770761 chr17 43045045 43045130 86 - 0 GT AG 0 0 ,61833:1,62012:2,65726:1 3 4 1.333 1.000 4 TCGA:I 14770762 chr17 43045045 43045225 181 - 0 GT AG 0 0 ,62025:1 1 1 1.000 1.000 4 TCGA:I 14770763 chr17 43045053 43045092 40 - 0 GT AG 0 0 ,65173:1 1 1 1.000 1.000 4 TCGA:I 14770764 chr17 43045057 43045314 258 + 0 GC AG 0 0 ,59914:1 1 1 1.000 1.000 4 TCGA:I 14770765 chr17 43045059 43045316 258 - 0 GC AG 0 0 ,59914:1 1 1 1.000 1.000 4 TCGA:I 14770766 chr17 43045059 43045338 280 - 0 GC AG 0 0 ,60003:1,60511:1,61096:1,64058:1 4 4 1.000 1.000 4 TCGA:I 14770767 chr17 43045067 43045154 88 - 0 AT AC 0 0 ,66658:1 1 1 1.000 1.000 4 TCGA:I 14770768 chr17 43045067 43045972 906 + 0 GT AG 0 0 ,64610:1 1 1 1.000 1.000 4 TCGA:I 14770769 chr17 43045082 43045337 256 + 0 GC AG 0 0 ,60483:1 1 1 1.000 1.000 4 TCGA:I 14770770 chr17 43045102 43045571 470 + 0 GT AG 0 0 ,63547:1 1 1 1.000 1.000 4 TCGA:I 14770771 chr17 43045102 43371883 326782 + 0 GT AG 0 0 ,69432:1 1 1 1.000 1.000 4 TCGA:I 14770772 chr17 43045114 43433506 388393 - 0 GC AG 0 0 ,60925:1 1 1 1.000 1.000 4 TCGA:I 14770773 chr17 43045120 43045349 230 + 0 AT AC 0 0 ,68898:1 1 1 1.000 1.000 4 TCGA:I 14770774 chr17 43045124 43045288 165 - 0 GT AG 0 0 ,64755:1 1 1 1.000 1.000 4 TCGA:I 14770775 chr17 43045131 43067607 22477 - 0 GT AG 0 aC19,cG19,cG38,gC19,gC38,kG19,kG38,mG19,mG38,rG19,rG38,sG19,sG38,vG19 ,65989:1 1 1 1.000 1.000 4 TCGA:I 14770776 chr17 43045135 43045180 46 - 0 GC AG 0 0 ,67791:1 1 1 1.000 1.000 4 TCGA:I 14770777 chr17 43045135 43045256 122 - 0 GC AG 0 0 ,66066:1 1 1 1.000 1.000 4 TCGA:I 14770778 chr17 43045135 43045302 168 - 0 GC AG 0 0 ,69294:1 1 1 1.000 1.000 4 TCGA:I 14770779 chr17 43045153 43045167 15 + 0 AT AC 0 0 ,60449:1 1 1 1.000 1.000 4 TCGA:I 14770780 chr17 43045155 43045169 15 - 0 AT AC 0 0 ,60449:1 1 1 1.000 1.000 4 TCGA:I 14770781 chr17 43045155 43046124 970 - 0 AT AC 0 0 ,68367:1 1 1 1.000 1.000 4 TCGA:I 14770782 chr17 43045155 43092514 47360 - 0 AT AC 0 0 ,66317:1 1 1 1.000 1.000 4 TCGA:I 14770783 chr17 43045168 43045452 285 + 0 AT AC 0 0 ,65035:2 1 2 2.000 2.000 4 TCGA:I 14770784 chr17 43045188 43045207 20 - 0 GT AG 0 0 ,60414:1,62934:1,63499:1,63811:1,64469:1,64808:1,65173:1,65462:2,65841:1,67384:1,67649:1,67881:1,68788:1,68959:1,70147:1,70362:1,70546:1 17 18 1.059 1.000 4 TCGA:I 14770785 chr17 43045188 43045266 79 - 0 GT AG 0 0 ,60893:2 1 2 2.000 2.000 4 TCGA:I 14770786 chr17 43045190 43045207 18 + 0 AT AC 0 0 ,67162:1,69992:1 2 2 1.000 1.000 4 TCGA:I 14770787 chr17 43045190 43045268 79 + 0 AT AC 0 0 ,60893:2 1 2 2.000 2.000 4 TCGA:I 14770788 chr17 43045227 43071022 25796 - 0 GT AG 0 0 ,69111:1 1 1 1.000 1.000 4 TCGA:I 14770789 chr17 43045230 43046177 948 - 0 GC AG 0 0 ,65203:1 1 1 1.000 1.000 4 TCGA:I 14770790 chr17 43045243 43045372 130 + 0 GT AG 0 0 ,69991:1 1 1 1.000 1.000 4 TCGA:I 14770791 chr17 43045245 43045266 22 - 0 GT AG 0 0 ,67733:1 1 1 1.000 1.000 4 TCGA:I 14770792 chr17 43045251 43046177 927 - 0 GC AG 0 0 ,70623:1 1 1 1.000 1.000 4 TCGA:I 14770793 chr17 43045253 43046177 925 - 0 GC AG 0 0 ,60559:1 1 1 1.000 1.000 4 TCGA:I 14770794 chr17 43045257 43045355 99 - 0 GC AG 0 0 ,65320:1 1 1 1.000 1.000 4 TCGA:I 14770795 chr17 43045257 43046177 921 - 0 GC AG 0 0 ,68895:1 1 1 1.000 1.000 4 TCGA:I 14770796 chr17 43045257 43434789 389533 - 0 GC AG 0 0 ,61084:1 1 1 1.000 1.000 4 TCGA:I 14770797 chr17 43045288 43045452 165 - 0 GT AG 0 0 ,70569:1 1 1 1.000 1.000 4 TCGA:I 14770798 chr17 43045315 43045531 217 + 0 GC AG 0 0 ,61698:6 1 6 6.000 6.000 4 TCGA:I 14770799 chr17 43045315 43045541 227 + 0 GC AG 0 0 ,63684:1 1 1 1.000 1.000 4 TCGA:I 14770800 chr17 43045315 43074435 29121 + 0 GC AG 0 0 ,64180:1 1 1 1.000 1.000 4 TCGA:I 14770801 chr17 43045320 43060398 15079 + 0 GC AG 0 0 ,67453:1 1 1 1.000 1.000 4 TCGA:I 14770802 chr17 43045326 43076575 31250 - 0 GC AG 0 0 ,69528:3 1 3 3.000 3.000 4 TCGA:I 14770803 chr17 43045356 43045525 170 - 0 GC AG 0 0 ,66334:2 1 2 2.000 2.000 4 TCGA:I 14770804 chr17 43045356 43046276 921 - 0 GC AG 0 0 ,60404:1 1 1 1.000 1.000 4 TCGA:I 14770805 chr17 43045397 43091452 46056 - 0 GC AG 0 0 ,68271:1 1 1 1.000 1.000 4 TCGA:I 14770806 chr17 43045401 43045413 13 - 0 GC AG 0 0 ,60661:1 1 1 1.000 1.000 4 TCGA:I 14770807 chr17 43045441 43045560 120 - 0 AT AC 0 0 ,67629:2 1 2 2.000 2.000 4 TCGA:I 14770808 chr17 43045495 43097277 51783 + 0 GC AG 0 0 ,67742:1 1 1 1.000 1.000 4 TCGA:I 14770809 chr17 43045521 43045551 31 + 0 AT AC 0 0 ,69121:2 1 2 2.000 2.000 4 TCGA:I 14770810 chr17 43045524 43045619 96 + 0 GC AG 0 0 ,69328:3 1 3 3.000 3.000 4 TCGA:I 14770811 chr17 43045542 43046392 851 + 0 GC AG 0 0 ,70010:1 1 1 1.000 1.000 4 TCGA:I 14770812 chr17 43045542 43067640 22099 + 0 GC AG 0 0 ,61761:2 1 2 2.000 2.000 4 TCGA:I 14770813 chr17 43045542 43071206 25665 + 0 GC AG 0 0 ,62784:2 1 2 2.000 2.000 4 TCGA:I 14770814 chr17 43045548 43071212 25665 - 0 AT AC 0 0 ,62784:2 1 2 2.000 2.000 4 TCGA:I 14770815 chr17 43045585 43045611 27 - 0 GC AG 0 0 ,68106:2 1 2 2.000 2.000 4 TCGA:I 14770816 chr17 43045602 43057086 11485 - 0 GT AG 0 0 ,62376:1 1 1 1.000 1.000 4 TCGA:I 14770817 chr17 43045610 43076558 30949 + 0 GC AG 0 0 ,66007:1 1 1 1.000 1.000 4 TCGA:I 14770818 chr17 43045612 43074341 28730 - 0 GC AG 0 0 ,66093:1 1 1 1.000 1.000 4 TCGA:I 14770819 chr17 43045612 43074468 28857 - 0 GC AG 0 0 ,64710:2 1 2 2.000 2.000 4 TCGA:I 14770820 chr17 43045612 43076560 30949 - 0 GC AG 0 0 ,66007:1 1 1 1.000 1.000 4 TCGA:I 14770821 chr17 43045633 43063332 17700 - 0 GT AG 0 aC19,cG19,cG38,gC19,gC38,kG19,kG38,mG19,mG38,rG19,rG38,sG19,sG38,vG19 ,62376:1 1 1 1.000 1.000 4 TCGA:I 14770822 chr17 43045636 43070964 25329 + 0 AT AC 0 0 ,68530:1 1 1 1.000 1.000 4 TCGA:I 14770823 chr17 43045639 43074341 28703 - 0 GC AG 0 0 ,67808:1 1 1 1.000 1.000 4 TCGA:I 14770824 chr17 43045648 43045661 14 - 0 GT AG 0 0 ,60063:1,60181:1,60877:1,62888:1,63369:1,66017:1,67904:1,69019:1,69468:1 9 9 1.000 1.000 4 TCGA:I 14770825 chr17 43045648 43051062 5415 - 0 GT AG 0 aC19,cG19,cG38,gC19,gC38,kG19,kG38,mG19,mG38,rG19,rG38,sG19,sG38,vG19 ,63797:1 1 1 1.000 1.000 4 TCGA:I 14770826 chr17 43045662 43046438 777 - 0 GT AG 0 0 ,69167:1 1 1 1.000 1.000 4 TCGA:I 14770827 chr17 43045662 43049177 3516 - 0 GT AG 0 0 ,67762:1 1 1 1.000 1.000 4 TCGA:I 14770828 chr17 43045662 43051062 5401 - 0 GT AG 0 aC19,cG19,cG38,gC19,gC38,kG19,kG38,mG19,mG38,rG19,rG38,sG19,sG38,vG19 ,70402:1 1 1 1.000 1.000 4 TCGA:I 14770829 chr17 43045662 43094513 48852 - 0 GT AG 0 0 ,64363:1 1 1 1.000 1.000 4 TCGA:I 14770830 chr17 43045664 43047672 2009 - 0 AT AC 0 0 ,66497:1 1 1 1.000 1.000 4 TCGA:I 14770831 chr17 43045667 43071206 25540 + 0 GC AG 0 0 ,64612:1 1 1 1.000 1.000 4 TCGA:I 14770832 chr17 43045668 43092773 47106 - 0 GT AG 0 0 ,67453:1 1 1 1.000 1.000 4 TCGA:I 14770833 chr17 43045672 43047680 2009 - 0 GC AG 0 0 ,66497:1 1 1 1.000 1.000 4 TCGA:I 14770834 chr17 43045674 43082542 36869 + 0 GC AG 0 0 ,68089:1 1 1 1.000 1.000 4 TCGA:I 14770835 chr17 43045681 43233290 187610 + 0 GT AG 0 0 ,69935:1 1 1 1.000 1.000 4 TCGA:I 14770836 chr17 43045684 43045714 31 + 0 GT AG 0 0 ,69559:1 1 1 1.000 1.000 4 TCGA:I 14770837 chr17 43045684 43047672 1989 - 0 AT AC 0 0 ,60186:1 1 1 1.000 1.000 4 TCGA:I 14770838 chr17 43045688 43051062 5375 - 0 GT AG 0 aC19,cG19,cG38,gC19,gC38,kG19,kG38,mG19,mG38,rG19,rG38,sG19,sG38,vG19 ,61487:1,64862:1,70543:1 3 3 1.000 1.000 4 TCGA:I 14770839 chr17 43045690 43090561 44872 - 0 AT AC 0 0 ,67426:1 1 1 1.000 1.000 4 TCGA:I 14770840 chr17 43045699 43051062 5364 - 0 GT AG 0 aC19,cG19,cG38,gC19,gC38,kG19,kG38,mG19,mG38,rG19,rG38,sG19,sG38,vG19 ,67808:1 1 1 1.000 1.000 4 TCGA:I 14770841 chr17 43045704 43211022 165319 + 0 GT AG 0 0 ,66393:1 1 1 1.000 1.000 4 TCGA:I 14770842 chr17 43045711 43045778 68 + 0 GT AG 0 0 ,61964:2,65173:1,68089:1 3 4 1.333 1.000 4 TCGA:I 14770843 chr17 43045711 43047120 1410 + 0 GT AG 0 0 ,60767:1,64393:1,64683:1,65373:1,65991:1 5 5 1.000 1.000 4 TCGA:I 14770844 chr17 43045711 43071175 25465 + 0 GT AG 0 0 ,63866:1 1 1 1.000 1.000 4 TCGA:I 14770845 chr17 43045711 43094599 48889 + 0 GT AG 0 0 ,62890:2 1 2 2.000 2.000 4 TCGA:I 14770846 chr17 43045715 43045778 64 + 0 GT AG 0 0 ,67055:2 1 2 2.000 2.000 4 TCGA:I 14770847 chr17 43045715 43063799 18085 + 0 GT AG 0 0 ,63909:1 1 1 1.000 1.000 4 TCGA:I 14770848 chr17 43045723 43125241 79519 - 0 GC AG 0 0 ,60187:2 1 2 2.000 2.000 4 TCGA:I 14770849 chr17 43045743 43049120 3378 - 0 GT AG 0 aC19,cG19,cG38,gC19,gC38,kG19,kG38,mG19,mG38,rG19,rG38,sG19,sG38,vG19 ,60498:1 1 1 1.000 1.000 4 TCGA:I 14770850 chr17 43045769 43046301 533 + 0 GT AG 0 0 ,70384:1 1 1 1.000 1.000 4 TCGA:I 14770851 chr17 43045779 43046373 595 + 0 GT AG 0 0 ,63996:1 1 1 1.000 1.000 4 TCGA:I 14770852 chr17 43045779 43049158 3380 + 0 GT AG 0 0 ,62025:1,62854:1,64397:1,67546:1,68015:1,69924:1 6 6 1.000 1.000 4 TCGA:I 14770853 chr17 43045779 43057113 11335 - 0 AT AC 0 0 ,67367:1 1 1 1.000 1.000 4 TCGA:I 14770854 chr17 43045783 43046377 595 - 0 GC AG 0 0 ,63996:1 1 1 1.000 1.000 4 TCGA:I 14770855 chr17 43045790 43057111 11322 + 0 AT AC 0 0 ,60186:1,70189:1 2 2 1.000 1.000 4 TCGA:I 14770856 chr17 43045790 43091016 45227 + 0 AT AC 0 0 ,61259:1 1 1 1.000 1.000 4 TCGA:I 14770857 chr17 43045790 43093129 47340 + 0 AT AC 0 0 ,69111:2 1 2 2.000 2.000 4 TCGA:I 14770858 chr17 43045792 43047642 1851 - 0 GT AG 0 aC19,cG19,cG38,gC19,gC38,kG19,kG38,mG19,mG38,rG19,rG38,sG19,sG38,vG19 ,60419:1,62147:1,69761:1 3 3 1.000 1.000 4 TCGA:I 14770859 chr17 43045799 43049120 3322 + 0 AT AC 0 aC19,cG19,cG38,gC19,gC38,kG19,kG38,mG19,mG38,rG19,rG38,sG19,sG38,vG19 ,70139:1 1 1 1.000 1.000 4 TCGA:I 14770860 chr17 43045802 43047144 1343 + 0 GC AG 0 0 ,69026:1 1 1 1.000 1.000 4 TCGA:I 14770861 chr17 43045803 43046171 369 - 0 GT AG aC19,cG19,cG38,gC19,gC38,kG19,kG38,mG19,mG38,rG19,rG38,sG19,sG38,vG19 0 ,60250:1,64442:2,65723:2,70862:1 4 6 1.500 1.500 4 TCGA:I 14770862 chr17 43045803 43047637 1835 - 0 GT AG aC19,cG19,cG38,gC19,gC38,kG19,kG38,mG19,mG38,rG19,rG38,sG19,sG38,vG19 0 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142 160 1.127 1.000 4 TCGA:I 14770863 chr17 43045803 43047642 1840 - 1 GT AG aC19,cG19,cG38,gC19,gC38,kG19,kG38,mG19,mG38,rG19,rG38,sG19,sG38,vG19 aC19,cG19,cG38,gC19,gC38,kG19,kG38,mG19,mG38,rG19,rG38,sG19,sG38,vG19 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aC19,cG19,cG38,gC19,gC38,kG19,kG38,mG19,mG38,rG19,rG38,sG19,sG38,vG19 ,59776:1,59831:1,60038:2,60245:1,60668:1,60782:6,61102:1,61142:1,61750:1,61820:1,62239:1,62304:2,62549:1,62615:2,63023:1,63349:1,63944:1,64237:1,64433:1,65362:1,65369:1,65553:1,65771:1,65795:1,65819:1,65923:1,66075:1,66412:1,66961:2,67415:1,68285:1,68512:1,68629:1,68735:1,69145:1,69995:1,70104:1,70351:1,70417:1 39 48 1.231 1.000 4 TCGA:I 14770866 chr17 43045803 43057051 11249 - 0 GT AG aC19,cG19,cG38,gC19,gC38,kG19,kG38,mG19,mG38,rG19,rG38,sG19,sG38,vG19 aC19,cG19,cG38,gC19,gC38,kG19,kG38,mG19,mG38,rG19,rG38,sG19,sG38,vG19 ,63165:2,69957:1 2 3 1.500 1.500 4 TCGA:I 14770867 chr17 43045803 43067607 21805 - 0 GT AG aC19,cG19,cG38,gC19,gC38,kG19,kG38,mG19,mG38,rG19,rG38,sG19,sG38,vG19 aC19,cG19,cG38,gC19,gC38,kG19,kG38,mG19,mG38,rG19,rG38,sG19,sG38,vG19 ,60686:5,64260:1 2 6 3.000 3.000 4 TCGA:I 14770868 chr17 43045803 43070957 25155 - 0 GT AG aC19,cG19,cG38,gC19,gC38,kG19,kG38,mG19,mG38,rG19,rG38,sG19,sG38,vG19 0 ,67261:1 1 1 1.000 1.000 4 TCGA:I 14770869 chr17 43045803 43076487 30685 - 0 GT AG aC19,cG19,cG38,gC19,gC38,kG19,kG38,mG19,mG38,rG19,rG38,sG19,sG38,vG19 aC19,cG19,cG38,gC19,gC38,kG19,kG38,mG19,mG38,rG19,rG38,sG19,sG38,vG19 ,60302:1,63543:1,64775:1,64927:1,66295:1,67730:1,68632:2,69916:1,70317:1 9 10 1.111 1.000 4 TCGA:I 14770870 chr17 43045803 43082403 36601 - 0 GT AG aC19,cG19,cG38,gC19,gC38,kG19,kG38,mG19,mG38,rG19,rG38,sG19,sG38,vG19 aC19,cG19,cG38,gC19,gC38,kG19,kG38,mG19,mG38,rG19,rG38,sG19,sG38,vG19 ,65930:1 1 1 1.000 1.000 4 TCGA:I 14770871 chr17 43045968 43046747 780 + 0 GC AG 0 0 ,64099:2 1 2 2.000 2.000 4 TCGA:I 14770872 chr17 43045994 43046754 761 - 0 GT AG 0 0 ,66551:2 1 2 2.000 2.000 4 TCGA:I 14770873 chr17 43046004 43046479 476 - 0 GT AG 0 0 ,62874:1 1 1 1.000 1.000 4 TCGA:I 14770874 chr17 43046004 43528017 482014 - 0 GT AG 0 0 ,60207:1,60288:1,60364:1,60518:1,60789:1,60875:1,60930:1,60994:1,61202:1,61203:1,61274:1,61403:1,61611:3,61718:1,61744:1,61866:1,61933:1,62125:1,62146:1,62328:1,62631:1,62639:1,62980:1,63144:1,63319:1,63561:1,63606:1,63901:1,64090:1,64207:1,64333:1,65044:1,65181:1,65193:1,65418:1,65513:1,65616:1,65738:1,65760:1,65793:1,65890:1,66053:1,66070:1,66591:1,66619:1,66973:1,67167:1,67204:1,67599:1,67653:1,67704:1,67750:1,67765:1,67817:1,68108:1,68240:1,68503:1,68811:1,68862:1,68964:1,69223:1,69393:2,69585:1,69741:1,69909:1,69928:1,69951:1,70075:1,70093:1,70113:1,70323:1,70563:1,70712:1,70842:1 74 77 1.041 1.000 4 TCGA:I 14770875 chr17 43046010 43046485 476 - 0 GT AG 0 0 ,62874:1 1 1 1.000 1.000 4 TCGA:I 14770876 chr17 43046010 43046677 668 - 0 GT AG 0 0 ,67708:1 1 1 1.000 1.000 4 TCGA:I 14770877 chr17 43046010 43053941 7932 - 0 GC AG 0 0 ,68158:2 1 2 2.000 2.000 4 TCGA:I 14770878 chr17 43046010 43382463 336454 - 0 GC AG 0 0 ,60318:1 1 1 1.000 1.000 4 TCGA:I 14770879 chr17 43046010 43528023 482014 - 0 GC AG 0 0 ,60207:1,60288:1,60364:1,60518:1,60789:1,60875:1,60930:1,60994:1,61202:1,61203:1,61274:1,61403:1,61611:3,61718:1,61744:1,61866:1,61933:1,62125:1,62146:1,62328:1,62631:1,62639:1,62980:1,63144:1,63319:1,63561:1,63606:1,63901:1,64090:1,64207:1,64333:1,65044:1,65181:1,65193:1,65418:1,65513:1,65616:1,65736:1,65738:1,65760:1,65793:2,65890:1,66053:1,66070:1,66591:1,66619:1,66710:1,66973:1,67167:1,67204:1,67599:1,67653:1,67704:1,67750:1,67765:1,67817:1,68108:1,68240:1,68503:1,68811:1,68862:1,68964:1,69223:1,69393:2,69585:1,69741:1,69909:1,69928:1,69951:1,70075:1,70093:1,70113:1,70323:1,70563:1,70712:1,70842:1 76 80 1.053 1.000 4 TCGA:I 14770880 chr17 43046013 43057808 11796 - 0 GC AG 0 0 ,65339:1 1 1 1.000 1.000 4 TCGA:I 14770881 chr17 43046065 43046373 309 + 0 GC AG 0 0 ,66658:1 1 1 1.000 1.000 4 TCGA:I 14770882 chr17 43046084 43046392 309 + 0 GC AG 0 0 ,61374:1 1 1 1.000 1.000 4 TCGA:I 14770883 chr17 43046123 43055600 9478 + 0 AT AC 0 0 ,62521:1 1 1 1.000 1.000 4 TCGA:I 14770884 chr17 43046125 43055602 9478 - 0 AT AC 0 0 ,62521:1 1 1 1.000 1.000 4 TCGA:I 14770885 chr17 43046134 43046392 259 + 0 GC AG 0 0 ,66989:1 1 1 1.000 1.000 4 TCGA:I 14770886 chr17 43046134 43046612 479 + 0 GC AG 0 0 ,60057:1,60670:1,60688:1,60813:1,61279:1,61783:1,61789:1,62053:1,62521:1,62683:1,62914:1,63011:1,64076:1,64251:2,64314:3,64662:1,64907:2,64920:3,65227:1,65389:1,65485:1,65946:1,66220:1,66231:1,66270:1,66334:1,66417:1,66420:1,67252:2,67733:1,67814:1,67859:1,68114:1,68805:1,69408:1,69479:1,69860:1,70151:1,70690:1,70849:1 40 47 1.175 1.000 4 TCGA:I 14770887 chr17 43046178 43047343 1166 - 0 GT AG 0 0 ,66231:1 1 1 1.000 1.000 4 TCGA:I 14770888 chr17 43046201 43046373 173 + 0 GC AG 0 0 ,61054:1,61533:1,61575:1,62732:1,65019:3,66135:2,67369:2,69457:1,70650:1,70975:1 10 14 1.400 1.000 4 TCGA:I 14770889 chr17 43046258 43046796 539 - 0 GC AG 0 0 ,60657:1 1 1 1.000 1.000 4 TCGA:I 14770890 chr17 43046277 43047642 1366 - 0 GT AG 0 aC19,cG19,cG38,gC19,gC38,kG19,kG38,mG19,mG38,rG19,rG38,sG19,sG38,vG19 ,60789:1,61480:1,61594:1,62511:1,63305:1,63524:1,63892:1,64390:1,64728:1,65021:2,65040:1,66529:2,66536:1,67428:1,68980:1,69058:7,69721:1,69792:1,69935:1 19 27 1.421 1.000 4 TCGA:I 14770891 chr17 43046277 43049120 2844 - 0 GT AG 0 aC19,cG19,cG38,gC19,gC38,kG19,kG38,mG19,mG38,rG19,rG38,sG19,sG38,vG19 ,65994:1 1 1 1.000 1.000 4 TCGA:I 14770892 chr17 43046295 43050594 4300 + 0 AT AC 0 0 ,68053:1,68742:1,69924:1 3 3 1.000 1.000 4 TCGA:I 14770893 chr17 43046297 43047213 917 - 0 GT AG 0 aC19 ,65770:1 1 1 1.000 1.000 4 TCGA:I 14770894 chr17 43046313 43046754 442 - 0 GT AG 0 0 ,70310:1 1 1 1.000 1.000 4 TCGA:I 14770895 chr17 43046319 43046485 167 - 0 GT AG 0 0 ,69535:1 1 1 1.000 1.000 4 TCGA:I 14770896 chr17 43046374 43047242 869 + 0 GT AG 0 0 ,69032:1 1 1 1.000 1.000 4 TCGA:I 14770897 chr17 43046393 43046612 220 + 0 GC AG 0 0 ,67191:1,67245:1 2 2 1.000 1.000 4 TCGA:I 14770898 chr17 43046426 43046754 329 - 0 GT AG 0 0 ,68417:1,68984:1 2 2 1.000 1.000 4 TCGA:I 14770899 chr17 43046426 43484669 438244 - 0 GC AG 0 0 ,67704:1 1 1 1.000 1.000 4 TCGA:I 14770900 chr17 43046430 43046850 421 - 0 GC AG 0 0 ,70641:1 1 1 1.000 1.000 4 TCGA:I 14770901 chr17 43046443 43046786 344 + 0 GC AG 0 0 ,59783:1 1 1 1.000 1.000 4 TCGA:I 14770902 chr17 43046443 43047144 702 + 0 GC AG 0 0 ,65462:1,65553:1,70807:1 3 3 1.000 1.000 4 TCGA:I 14770903 chr17 43046464 43047213 750 - 0 GT AG 0 aC19 ,69231:2 1 2 2.000 2.000 4 TCGA:I 14770904 chr17 43046512 43047213 702 - 0 GT AG 0 aC19 ,67049:1 1 1 1.000 1.000 4 TCGA:I 14770905 chr17 43046512 43048144 1633 - 0 GT AG 0 0 ,70470:1 1 1 1.000 1.000 4 TCGA:I 14770906 chr17 43046512 43077849 31338 - 0 GC AG 0 0 ,65672:1 1 1 1.000 1.000 4 TCGA:I 14770907 chr17 43046541 43047120 580 + 0 GT AG 0 0 ,60049:1,61071:1,61933:1,62165:1,64075:1,64366:2,65663:1,67276:1,67737:1,68555:1,69013:1,70338:1,70664:1 13 14 1.077 1.000 4 TCGA:I 14770908 chr17 43046541 43047144 604 + 0 GT AG 0 0 ,62444:1,63842:1,65592:1,68595:1,69514:1,70853:1 6 6 1.000 1.000 4 TCGA:I 14770909 chr17 43046583 43055602 9020 - 0 AT AC 0 0 ,65644:1 1 1 1.000 1.000 4 TCGA:I 14770910 chr17 43046638 43047286 649 + 0 GT AG 0 0 ,67453:1 1 1 1.000 1.000 4 TCGA:I 14770911 chr17 43046653 43048389 1737 + 0 GC AG 0 0 ,61672:1 1 1 1.000 1.000 4 TCGA:I 14770912 chr17 43046653 43215917 169265 + 0 GC AG 0 0 ,67728:1 1 1 1.000 1.000 4 TCGA:I 14770913 chr17 43046653 43229611 182959 + 0 GC AG 0 0 ,60733:1 1 1 1.000 1.000 4 TCGA:I 14770914 chr17 43046659 43057278 10620 + 0 GC AG 0 0 ,63706:1 1 1 1.000 1.000 4 TCGA:I 14770915 chr17 43046659 43221998 175340 + 0 GC AG 0 0 ,68703:1 1 1 1.000 1.000 4 TCGA:I 14770916 chr17 43046659 43229617 182959 + 0 GC AG 0 0 ,60733:1 1 1 1.000 1.000 4 TCGA:I 14770917 chr17 43046685 43048389 1705 + 0 GC AG 0 0 ,59914:1 1 1 1.000 1.000 4 TCGA:I 14770918 chr17 43046728 43059888 13161 - 0 GC AG 0 0 ,61078:1,69025:1 2 2 1.000 1.000 4 TCGA:I 14770919 chr17 43046749 43047343 595 - 0 GT AG 0 0 ,70849:2 1 2 2.000 2.000 4 TCGA:I 14770920 chr17 43046775 43413924 367150 + 0 GC AG 0 0 ,60167:1,60731:1,61022:1,61403:1,61408:1,61496:1,61703:1,61813:1,61818:1,61871:1,61875:1,62492:1,63598:1,63825:1,64277:1,64592:1,64645:1,64932:1,65124:1,65178:1,65432:1,65441:1,65452:1,65636:1,65950:1,66265:1,66293:1,66335:1,66448:1,67210:1,67385:1,67455:1,67737:1,68132:1,69511:1,69639:1,69700:1,69719:1,69989:1,70583:1,71033:1,71037:1 42 42 1.000 1.000 4 TCGA:I 14770921 chr17 43046775 43512403 465629 + 0 GC AG 0 0 ,68757:1 1 1 1.000 1.000 4 TCGA:I 14770922 chr17 43046827 43050069 3243 - 0 GC AG 0 0 ,68417:1 1 1 1.000 1.000 4 TCGA:I 14770923 chr17 43046830 43050072 3243 + 0 GT AG 0 0 ,68417:1 1 1 1.000 1.000 4 TCGA:I 14770924 chr17 43046882 43047642 761 - 0 GT AG 0 aC19,cG19,cG38,gC19,gC38,kG19,kG38,mG19,mG38,rG19,rG38,sG19,sG38,vG19 ,61612:1,64311:1,64494:1,68285:1,68820:2,69535:1,70054:1 7 8 1.143 1.000 4 TCGA:I 14770925 chr17 43046913 43047642 730 - 0 GT AG 0 aC19,cG19,cG38,gC19,gC38,kG19,kG38,mG19,mG38,rG19,rG38,sG19,sG38,vG19 ,69422:1 1 1 1.000 1.000 4 TCGA:I 14770926 chr17 43046915 43064779 17865 - 0 AT AC 0 0 ,60686:5 1 5 5.000 5.000 4 TCGA:I 14770927 chr17 43046938 43047120 183 + 0 GT AG 0 0 ,65088:1,65874:1,65991:1,66837:1 4 4 1.000 1.000 4 TCGA:I 14770928 chr17 43046938 43047144 207 + 0 GT AG 0 0 ,64468:2,69515:2 2 4 2.000 2.000 4 TCGA:I 14770929 chr17 43047022 43048671 1650 + 0 GC AG 0 0 ,62702:1 1 1 1.000 1.000 4 TCGA:I 14770930 chr17 43047024 43048673 1650 - 0 GC AG 0 0 ,62702:1 1 1 1.000 1.000 4 TCGA:I 14770931 chr17 43047145 43047310 166 + 0 GC AG 0 0 ,62012:1,63464:1,66270:1,70820:1 4 4 1.000 1.000 4 TCGA:I 14770932 chr17 43047145 43047816 672 + 0 GC AG 0 0 ,63351:1,63849:1,65559:2,68427:1 4 5 1.250 1.000 4 TCGA:I 14770933 chr17 43047145 43515233 468089 + 0 GC AG 0 0 ,65686:1 1 1 1.000 1.000 4 TCGA:I 14770934 chr17 43047195 43048125 931 + 0 GC AG 0 0 ,64612:1 1 1 1.000 1.000 4 TCGA:I 14770935 chr17 43047214 43047443 230 - 0 GT AG 0 0 ,64850:1 1 1 1.000 1.000 4 TCGA:I 14770936 chr17 43047214 43048144 931 - 0 GT AG 0 0 ,63383:1 1 1 1.000 1.000 4 TCGA:I 14770937 chr17 43047302 43047409 108 - 0 AT AC 0 0 ,61518:1 1 1 1.000 1.000 4 TCGA:I 14770938 chr17 43047311 43047816 506 + 0 GC AG 0 0 ,60112:2 1 2 2.000 2.000 4 TCGA:I 14770939 chr17 43047311 43047984 674 + 0 GC AG 0 0 ,62052:1 1 1 1.000 1.000 4 TCGA:I 14770940 chr17 43047338 43047443 106 - 0 GT AG 0 0 ,65040:1,68855:2 2 3 1.500 1.500 4 TCGA:I 14770941 chr17 43047338 43048144 807 - 0 GT AG 0 0 ,68795:1 1 1 1.000 1.000 4 TCGA:I 14770942 chr17 43047367 43047642 276 - 0 GT AG 0 aC19,cG19,cG38,gC19,gC38,kG19,kG38,mG19,mG38,rG19,rG38,sG19,sG38,vG19 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,59799:1,59823:1,60234:1,60559:1,60645:1,60777:1,60882:1,61071:1,61314:1,61336:1,61368:1,61640:1,62471:2,62473:2,62579:1,62609:1,62702:1,63130:1,63166:1,63241:1,63376:1,63424:2,63476:1,63543:1,63866:1,64361:1,64369:1,64830:1,65016:1,65203:2,65826:1,65856:1,65859:1,65897:1,66113:2,66213:2,66376:2,66404:1,66464:2,66729:1,66773:1,67049:1,67401:1,67733:1,68053:1,68106:1,68246:1,68367:1,68368:1,68616:1,68700:3,68841:1,68880:1,68932:1,68970:4,69231:1,69254:1,69300:1,69422:2,69514:1,69549:1,69559:1,69927:1,70280:1,70362:1,70457:2,70500:2,70593:1,70812:1,71001:1 70 86 1.229 1.000 4 TCGA:I 14770958 chr17 43047735 43049000 1266 - 0 AT AC 0 0 ,59935:3 1 3 3.000 3.000 4 TCGA:I 14770959 chr17 43047758 43049120 1363 - 0 GT AG 0 aC19,cG19,cG38,gC19,gC38,kG19,kG38,mG19,mG38,rG19,rG38,sG19,sG38,vG19 ,61010:1 1 1 1.000 1.000 4 TCGA:I 14770960 chr17 43047854 43048284 431 - 0 GT AG 0 0 ,62643:1 1 1 1.000 1.000 4 TCGA:I 14770961 chr17 43047867 43048125 259 + 0 GC AG 0 0 ,64582:1 1 1 1.000 1.000 4 TCGA:I 14770962 chr17 43047886 43048453 568 - 0 GT AG 0 0 ,62853:1 1 1 1.000 1.000 4 TCGA:I 14770963 chr17 43047919 43048799 881 - 0 AT AC 0 0 ,63200:1 1 1 1.000 1.000 4 TCGA:I 14770964 chr17 43047931 43048361 431 - 0 GC AG 0 0 ,67038:1 1 1 1.000 1.000 4 TCGA:I 14770965 chr17 43048032 43048082 51 + 0 AT AC 0 0 ,60072:1 1 1 1.000 1.000 4 TCGA:I 14770966 chr17 43048032 43048797 766 + 0 AT AC 0 0 ,60661:2,68810:1 2 3 1.500 1.500 4 TCGA:I 14770967 chr17 43048094 43048733 640 - 0 GC AG 0 0 ,66170:1 1 1 1.000 1.000 4 TCGA:I 14770968 chr17 43048107 43048190 84 + 0 GC AG 0 0 ,70872:1 1 1 1.000 1.000 4 TCGA:I 14770969 chr17 43048126 43048190 65 + 0 GC AG 0 0 ,65362:1 1 1 1.000 1.000 4 TCGA:I 14770970 chr17 43048138 43048602 465 - 0 GC AG 0 0 ,63166:1 1 1 1.000 1.000 4 TCGA:I 14770971 chr17 43048145 43048316 172 - 0 GC AG 0 0 ,69902:1 1 1 1.000 1.000 4 TCGA:I 14770972 chr17 43048145 43072965 24821 - 0 GT AG 0 0 ,66350:1 1 1 1.000 1.000 4 TCGA:I 14770973 chr17 43048145 43314172 266028 - 0 GT AG 0 0 ,68607:1 1 1 1.000 1.000 4 TCGA:I 14770974 chr17 43048151 43048459 309 - 0 GC AG 0 0 ,69403:1 1 1 1.000 1.000 4 TCGA:I 14770975 chr17 43048151 43072971 24821 - 0 GC AG 0 0 ,66350:1 1 1 1.000 1.000 4 TCGA:I 14770976 chr17 43048157 43472418 424262 + 0 GT AG 0 0 ,70957:1 1 1 1.000 1.000 4 TCGA:I 14770977 chr17 43048194 43056065 7872 + 0 AT AC 0 0 ,61009:1 1 1 1.000 1.000 4 TCGA:I 14770978 chr17 43048211 43048503 293 - 0 GC AG 0 0 ,70295:1 1 1 1.000 1.000 4 TCGA:I 14770979 chr17 43048285 43048596 312 - 0 GT AG 0 0 ,59827:2,62458:1,63677:1,67195:1 4 5 1.250 1.000 4 TCGA:I 14770980 chr17 43048291 43048586 296 - 0 GC AG 0 0 ,59918:1 1 1 1.000 1.000 4 TCGA:I 14770981 chr17 43048291 43048602 312 - 0 GC AG 0 0 ,68543:1 1 1 1.000 1.000 4 TCGA:I 14770982 chr17 43048346 43048657 312 + 0 GC AG 0 0 ,70328:1 1 1 1.000 1.000 4 TCGA:I 14770983 chr17 43048346 43484784 436439 + 0 GC AG 0 0 ,65704:1 1 1 1.000 1.000 4 TCGA:I 14770984 chr17 43048346 43509626 461281 + 0 GC AG 0 0 ,66961:1 1 1 1.000 1.000 4 TCGA:I 14770985 chr17 43048405 43048722 318 - 0 AT AC 0 0 ,59799:1,61009:1,61134:1,62549:1,64489:1,64642:2,67941:1,68246:1,68891:1,70089:1 10 11 1.100 1.000 4 TCGA:I 14770986 chr17 43048405 43049388 984 - 0 AT AC 0 0 ,63244:1 1 1 1.000 1.000 4 TCGA:I 14770987 chr17 43048645 43048731 87 + 0 GC AG 0 0 ,66989:1 1 1 1.000 1.000 4 TCGA:I 14770988 chr17 43048658 43051912 3255 + 0 GC AG 0 0 ,70470:2 1 2 2.000 2.000 4 TCGA:I 14770989 chr17 43048660 43048797 138 + 0 AT AC 0 0 ,67762:1 1 1 1.000 1.000 4 TCGA:I 14770990 chr17 43048660 43051617 2958 + 0 AT AC 0 0 ,61204:1 1 1 1.000 1.000 4 TCGA:I 14770991 chr17 43048733 43068523 19791 - 0 GC AG 0 0 ,68533:1 1 1 1.000 1.000 4 TCGA:I 14770992 chr17 43048744 43157501 108758 - 0 GT AG 0 0 ,65889:1 1 1 1.000 1.000 4 TCGA:I 14770993 chr17 43048763 43074001 25239 - 0 GT AG 0 0 ,64887:1 1 1 1.000 1.000 4 TCGA:I 14770994 chr17 43048767 43067547 18781 - 0 GC AG 0 0 ,66213:1 1 1 1.000 1.000 4 TCGA:I 14770995 chr17 43048767 43074005 25239 - 0 GC AG 0 0 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TCGA:I 14771015 chr17 43049771 43400248 350478 + 0 AT AC 0 0 ,63328:1,67398:2 2 3 1.500 1.500 4 TCGA:I 14771016 chr17 43049810 43053216 3407 - 0 GT AG 0 0 ,62437:1 1 1 1.000 1.000 4 TCGA:I 14771017 chr17 43049833 43050817 985 + 0 AT AC 0 0 ,69121:2 1 2 2.000 2.000 4 TCGA:I 14771018 chr17 43049893 43051062 1170 - 0 GT AG 0 aC19,cG19,cG38,gC19,gC38,kG19,kG38,mG19,mG38,rG19,rG38,sG19,sG38,vG19 ,61586:1,62600:2,63543:1,66725:1,69484:1,70528:1 6 7 1.167 1.000 4 TCGA:I 14771019 chr17 43049897 43051062 1166 - 0 GT AG 0 aC19,cG19,cG38,gC19,gC38,kG19,kG38,mG19,mG38,rG19,rG38,sG19,sG38,vG19 ,60624:1,61503:1,66696:1,66794:1,67523:1,68089:1,69913:1 7 7 1.000 1.000 4 TCGA:I 14771020 chr17 43049901 43051062 1162 - 0 GT AG 0 aC19,cG19,cG38,gC19,gC38,kG19,kG38,mG19,mG38,rG19,rG38,sG19,sG38,vG19 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TCGA:I 14771022 chr17 43049961 43051062 1102 - 0 GT AG 0 aC19,cG19,cG38,gC19,gC38,kG19,kG38,mG19,mG38,rG19,rG38,sG19,sG38,vG19 ,60206:1,61315:2,61750:1,62393:1,62677:1,62684:1,63015:1,63069:1,63185:1,63733:1,63970:1,64320:1,64551:1,64687:1,64830:1,64985:1,65274:1,65279:1,65864:1,66187:1,66925:1,67328:1,67485:1,67981:1,70593:1,70807:1,70911:1 27 28 1.037 1.000 4 TCGA:I 14771023 chr17 43049982 43050061 80 - 0 GT AG 0 aC19,gC19,gC38,kG19,kG38,sG19,sG38 ,63163:1,68742:2 2 3 1.500 1.500 4 TCGA:I 14771024 chr17 43050034 43051062 1029 - 0 GT AG 0 aC19,cG19,cG38,gC19,gC38,kG19,kG38,mG19,mG38,rG19,rG38,sG19,sG38,vG19 ,66248:1 1 1 1.000 1.000 4 TCGA:I 14771025 chr17 43050115 43050228 114 + 0 GC AG 0 0 ,65037:1,66233:1 2 2 1.000 1.000 4 TCGA:I 14771026 chr17 43050115 43052012 1898 + 0 GC AG 0 0 ,65917:2 1 2 2.000 2.000 4 TCGA:I 14771027 chr17 43050117 43050230 114 - 0 GC AG 0 0 ,65037:1,66233:1 2 2 1.000 1.000 4 TCGA:I 14771028 chr17 43050117 43052014 1898 - 0 GC AG 0 0 ,65917:1 1 1 1.000 1.000 4 TCGA:I 14771029 chr17 43050171 43050253 83 + 0 GC AG 0 0 ,66432:3 1 3 3.000 3.000 4 TCGA:I 14771030 chr17 43050171 43050973 803 + 0 GC AG 0 0 ,62096:1 1 1 1.000 1.000 4 TCGA:I 14771031 chr17 43050185 43051062 878 - 0 GT AG 0 aC19,cG19,cG38,gC19,gC38,kG19,kG38,mG19,mG38,rG19,rG38,sG19,sG38,vG19 ,67093:1 1 1 1.000 1.000 4 TCGA:I 14771032 chr17 43050191 43050348 158 - 0 GC AG aC19,gC19,gC38,kG19,kG38,sG19,sG38 0 ,65586:1,66288:1 2 2 1.000 1.000 4 TCGA:I 14771033 chr17 43050191 43051062 872 - 0 GT AG aC19,gC19,gC38,kG19,kG38,sG19,sG38 aC19,cG19,cG38,gC19,gC38,kG19,kG38,mG19,mG38,rG19,rG38,sG19,sG38,vG19 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472 559 1.184 1.000 4 TCGA:I 14771034 chr17 43050191 43057051 6861 - 0 GT AG aC19,gC19,gC38,kG19,kG38,sG19,sG38 aC19,cG19,cG38,gC19,gC38,kG19,kG38,mG19,mG38,rG19,rG38,sG19,sG38,vG19 ,68299:1 1 1 1.000 1.000 4 TCGA:I 14771035 chr17 43050328 43052325 1998 + 0 GC AG 0 0 ,70740:1 1 1 1.000 1.000 4 TCGA:I 14771036 chr17 43050329 43050585 257 - 0 GC AG 0 0 ,62888:2 1 2 2.000 2.000 4 TCGA:I 14771037 chr17 43050342 43052507 2166 - 0 GC AG 0 0 ,62702:1 1 1 1.000 1.000 4 TCGA:I 14771038 chr17 43050342 43065128 14787 - 0 GC AG 0 0 ,62680:1 1 1 1.000 1.000 4 TCGA:I 14771039 chr17 43050342 43067552 17211 - 0 GC AG 0 0 ,61597:1 1 1 1.000 1.000 4 TCGA:I 14771040 chr17 43050345 43052343 1999 + 0 AT AC 0 0 ,60386:1,61275:2,68855:1 3 4 1.333 1.000 4 TCGA:I 14771041 chr17 43050345 43055803 5459 + 0 AT AC 0 0 ,63376:1 1 1 1.000 1.000 4 TCGA:I 14771042 chr17 43050349 43051928 1580 - 0 GC AG 0 0 ,61591:1 1 1 1.000 1.000 4 TCGA:I 14771043 chr17 43050349 43055807 5459 - 0 GC AG 0 0 ,63376:1 1 1 1.000 1.000 4 TCGA:I 14771044 chr17 43050349 43070226 19878 - 0 GC AG 0 0 ,60191:1 1 1 1.000 1.000 4 TCGA:I 14771045 chr17 43050372 43050510 139 + 0 GC AG 0 0 ,64764:1 1 1 1.000 1.000 4 TCGA:I 14771046 chr17 43050378 43050516 139 + 0 GC AG 0 0 ,64764:1 1 1 1.000 1.000 4 TCGA:I 14771047 chr17 43050378 43067155 16778 + 0 GC AG 0 0 ,68565:1 1 1 1.000 1.000 4 TCGA:I 14771048 chr17 43050440 43051062 623 - 0 GT AG 0 aC19,cG19,cG38,gC19,gC38,kG19,kG38,mG19,mG38,rG19,rG38,sG19,sG38,vG19 ,60823:1,61957:2,64986:1 3 4 1.333 1.000 4 TCGA:I 14771049 chr17 43050443 43051062 620 - 0 GT AG 0 aC19,cG19,cG38,gC19,gC38,kG19,kG38,mG19,mG38,rG19,rG38,sG19,sG38,vG19 ,61628:1,62522:1,64794:2,65429:1,68844:1,70251:2 6 8 1.333 1.000 4 TCGA:I 14771050 chr17 43050474 43052239 1766 - 0 AT AC 0 0 ,67185:1 1 1 1.000 1.000 4 TCGA:I 14771051 chr17 43050511 43053425 2915 + 0 GC AG 0 0 ,70807:1 1 1 1.000 1.000 4 TCGA:I 14771052 chr17 43050511 43053866 3356 + 0 GC AG 0 0 ,70807:1 1 1 1.000 1.000 4 TCGA:I 14771053 chr17 43050511 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0 ,70047:1 1 1 1.000 1.000 4 TCGA:I 14771095 chr17 43052104 43052810 707 + 0 AT AC 0 0 ,61601:1 1 1 1.000 1.000 4 TCGA:I 14771096 chr17 43052395 43052990 596 - 0 GC AG 0 0 ,60078:1,66007:1 2 2 1.000 1.000 4 TCGA:I 14771097 chr17 43052408 43052477 70 - 0 AT AC 0 0 ,71033:1 1 1 1.000 1.000 4 TCGA:I 14771098 chr17 43052661 43052870 210 + 0 GC AG 0 0 ,69537:1 1 1 1.000 1.000 4 TCGA:I 14771099 chr17 43052661 43218851 166191 + 0 GC AG 0 0 ,68540:1 1 1 1.000 1.000 4 TCGA:I 14771100 chr17 43052663 43218853 166191 - 0 GC AG 0 0 ,68540:1 1 1 1.000 1.000 4 TCGA:I 14771101 chr17 43052922 43314104 261183 + 0 GC AG 0 0 ,64081:1 1 1 1.000 1.000 4 TCGA:I 14771102 chr17 43052933 43053648 716 + 0 AT AC 0 0 ,65173:1 1 1 1.000 1.000 4 TCGA:I 14771103 chr17 43052943 43053935 993 - 0 GT AG 0 0 ,61591:1 1 1 1.000 1.000 4 TCGA:I 14771104 chr17 43052997 43053941 945 - 0 GC AG 0 0 ,70740:1 1 1 1.000 1.000 4 TCGA:I 14771105 chr17 43053020 43053591 572 + 0 GT AG 0 0 ,61310:1 1 1 1.000 1.000 4 TCGA:I 14771106 chr17 43053059 43053732 674 + 0 GT AG 0 0 ,61974:1 1 1 1.000 1.000 4 TCGA:I 14771107 chr17 43053084 43053732 649 + 0 GC AG 0 0 ,61594:1 1 1 1.000 1.000 4 TCGA:I 14771108 chr17 43053125 43066657 13533 - 0 GC AG 0 0 ,61678:1 1 1 1.000 1.000 4 TCGA:I 14771109 chr17 43053130 43066662 13533 + 0 GC AG 0 0 ,61678:1 1 1 1.000 1.000 4 TCGA:I 14771110 chr17 43053326 43194400 141075 + 0 GC AG 0 0 ,62102:2 1 2 2.000 2.000 4 TCGA:I 14771111 chr17 43053401 43054738 1338 + 0 GC AG 0 0 ,67413:1 1 1 1.000 1.000 4 TCGA:I 14771112 chr17 43053403 43386663 333261 - 0 GT AG 0 0 ,63761:1,69329:1 2 2 1.000 1.000 4 TCGA:I 14771113 chr17 43053426 43053732 307 + 0 GC AG 0 0 ,59779:1,59784:1,59814:2,59860:1,59893:1,59940:1,60039:1,60095:1,60176:1,60236:1,60256:1,60262:3,60288:1,60292:1,60315:1,60340:1,60396:1,60403:1,60459:1,60479:1,60492:1,60518:2,60526:1,60535:1,60539:2,60561:1,60571:1,60577:3,60605:1,60661:1,60703:1,60706:1,60757:1,60777:1,60783:1,60825:1,60827:1,60865:1,60873:1,60880:1,60896:1,60918:1,60971:1,61039:1,61101:1,61111:1,61197:1,61215:1,61220:1,61279:1,61286:1,61305:1,61321:2,61333:1,61411:1,61444:1,61517:1,61553:1,61570:2,61617:1,61876:1,61880:1,61889:8,61892:1,61996:1,62035:1,62045:1,62051:1,62140:2,62168:1,62200:1,62239:1,62245:1,62267:1,62277:1,62292:1,62304:4,62336:1,62360:1,62374:1,62394:1,62395:1,62399:1,62401:1,62449:1,62497:1,62514:1,62522:1,62526:1,62559:1,62563:1,62580:1,62612:1,62652:2,62737:1,62774:1,62833:2,62880:1,62944:1,62984:1,62993:1,63030:1,63035:1,63043:1,63115:1,63194:1,63212:2,63232:1,63271:1,63276:1,63333:1,63418:1,63474:2,63487:1,63495:1,63498:1,63499:1,63519:1,63533:1,63564:1,63610:1,63662:1,63773:1,63793:1,63912:1,63982:2,64035:2,64070:1,64075:1,64083:1,64084:1,64167:1,64230:3,64298:1,64305:1,64351:1,64389:1,64402:1,64412:1,64432:1,64433:1,64489:2,64735:1,64780:1,64838:1,64876:2,64899:1,64902:1,64918:1,64922:1,64968:1,64969:1,64983:1,64989:1,65013:1,65058:1,65067:7,65116:1,65132:1,65169:2,65170:1,65174:1,65202:1,65220:1,65277:1,65333:1,65363:1,65371:1,65421:1,65438:1,65441:1,65522:1,65544:3,65622:1,65636:1,65651:1,65732:1,65811:1,65826:1,65892:1,65916:2,65967:1,65978:1,65999:1,66001:1,66097:1,66102:1,66113:1,66117:1,66118:1,66126:1,66155:1,66240:1,66243:1,66275:1,66280:1,66377:2,66390:1,66435:1,66540:1,66545:1,66583:1,66593:1,66603:1,66636:1,66647:1,66733:2,66754:1,66764:1,66772:1,66791:1,66806:1,66828:1,66841:1,66866:2,66923:1,66937:1,66950:1,66964:1,67090:1,67158:1,67167:1,67174:1,67236:2,67308:1,67430:1,67433:1,67488:1,67509:1,67528:1,67542:2,67554:1,67596:1,67670:1,67685:1,67730:1,67770:1,67848:1,67853:1,67854:1,67871:2,67887:1,67908:1,67917:1,68126:1,68173:1,68222:1,68239:1,68256:1,68268:1,68279:2,68294:1,68356:1,68421:1,68446:1,68448:1,68516:1,68551:1,68553:1,68676:1,68687:1,68714:1,68720:1,68779:1,68798:1,68839:1,68901:2,68921:1,68932:1,68958:1,68969:1,68970:2,68995:1,69004:1,69033:2,69084:1,69091:1,69130:1,69146:1,69197:1,69323:1,69339:1,69381:1,69473:1,69478:1,69557:1,69568:1,69609:1,69657:1,69667:1,69670:1,69690:1,69743:1,69771:1,69824:1,69828:1,69846:1,69896:1,69932:2,69953:1,69998:1,70022:1,70040:1,70049:1,70110:2,70118:2,70119:1,70140:1,70160:1,70200:1,70257:1,70263:1,70289:1,70299:2,70405:1,70485:1,70516:1,70565:1,70691:1,70703:1,70767:1,70774:1,70780:1,70782:1,70799:1,70811:3,70827:1,70875:1,70984:1,70990:1,70991:1,71006:2,71109:1,71110:1 334 391 1.171 1.000 4 TCGA:I 14771114 chr17 43053432 43053738 307 + 0 GC AG 0 0 ,59779:1,59814:1,59893:1,59907:1,59908:1,60039:1,60176:1,60256:1,60288:1,60345:1,60403:1,60428:1,60463:1,60472:1,60479:1,60535:1,60561:1,60706:1,60756:3,60783:1,60827:1,60874:1,60896:1,60914:1,60998:1,61111:1,61197:1,61215:1,61286:1,61305:1,61333:1,61411:1,61517:1,61570:2,61617:1,61892:1,62017:1,62035:1,62045:1,62140:1,62168:1,62171:3,62239:1,62277:1,62330:2,62357:1,62360:1,62395:1,62399:1,62461:1,62526:1,62652:1,62774:1,62833:2,62944:1,63030:1,63035:1,63043:1,63122:1,63194:1,63212:2,63276:1,63474:2,63495:1,63564:1,63594:1,63773:1,63774:1,64099:1,64230:3,64248:1,64298:1,64313:1,64351:1,64415:1,64432:1,64433:1,64510:1,64876:2,64902:1,64918:1,64922:1,64983:1,65117:1,65132:1,65169:1,65174:1,65333:1,65406:1,65421:1,65441:1,65639:1,65732:1,65871:1,65892:1,65916:2,65967:1,65974:1,66001:1,66097:1,66155:1,66218:1,66240:1,66280:1,66583:1,66593:1,66733:2,66754:1,66772:1,66806:1,66828:1,66841:1,66937:1,66964:1,67106:1,67167:1,67174:1,67210:1,67236:2,67488:1,67528:1,67554:1,67555:1,67685:1,67733:1,67734:1,67822:1,67848:1,67853:1,67871:2,67917:1,68126:1,68279:2,68356:1,68421:1,68448:1,68551:1,68553:1,68714:1,68839:1,68921:1,69004:1,69033:1,69091:1,69092:1,69146:1,69199:1,69339:1,69491:1,69557:1,69572:1,69609:1,69610:1,69632:1,69667:1,69690:1,69743:1,69846:1,70077:1,70110:2,70118:2,70140:1,70160:1,70607:1,70614:1,70679:1,70691:1,70703:1,70774:1,70780:1,70897:1,70970:1,70987:1,70990:1,70991:1 175 194 1.109 1.000 4 TCGA:I 14771115 chr17 43053432 43053872 441 + 0 GC AG 0 0 ,59932:1 1 1 1.000 1.000 4 TCGA:I 14771116 chr17 43053436 43053876 441 + 0 GC AG 0 0 ,59932:1,70807:1 2 2 1.000 1.000 4 TCGA:I 14771117 chr17 43053552 43053724 173 - 0 GT AG 0 0 ,60688:1,65444:1 2 2 1.000 1.000 4 TCGA:I 14771118 chr17 43053560 43053732 173 + 0 GC AG 0 0 ,61733:1,65444:1 2 2 1.000 1.000 4 TCGA:I 14771119 chr17 43053560 43053866 307 + 0 GC AG 0 0 ,61374:1,70579:1 2 2 1.000 1.000 4 TCGA:I 14771120 chr17 43053560 43054460 901 + 0 GC AG 0 0 ,63461:1 1 1 1.000 1.000 4 TCGA:I 14771121 chr17 43053566 43053738 173 + 0 GC AG 0 0 ,60216:1,60711:2,60823:1,61399:1,61889:1,61941:1,62081:1,63433:1,63628:1,63818:1,65076:1,65636:1,66267:1,66468:1,66767:1,66871:1,67435:1,68383:2,68598:1,69191:1,69487:1,69583:2,69877:1,70881:1 24 27 1.125 1.000 4 TCGA:I 14771122 chr17 43053566 43053872 307 + 0 GC AG 0 0 ,61374:1,70579:1 2 2 1.000 1.000 4 TCGA:I 14771123 chr17 43053603 43055067 1465 - 0 GC AG 0 0 ,64317:3 1 3 3.000 3.000 4 TCGA:I 14771124 chr17 43053640 43053941 302 - 0 GC AG 0 0 ,60559:1,70036:1 2 2 1.000 1.000 4 TCGA:I 14771125 chr17 43053710 43055048 1339 - 0 GC AG 0 0 ,63052:1 1 1 1.000 1.000 4 TCGA:I 14771126 chr17 43053718 43065118 11401 - 0 GT AG 0 0 ,63668:1 1 1 1.000 1.000 4 TCGA:I 14771127 chr17 43053733 43053866 134 + 0 GC AG 0 0 ,63485:1,70491:1 2 2 1.000 1.000 4 TCGA:I 14771128 chr17 43053757 43111306 57550 + 0 GT AG 0 0 ,68529:1 1 1 1.000 1.000 4 TCGA:I 14771129 chr17 43053757 43185783 132027 + 0 GT AG 0 0 ,65942:1 1 1 1.000 1.000 4 TCGA:I 14771130 chr17 43053757 43218447 164691 + 0 GT AG 0 0 ,61307:1,65194:1,65683:1,65864:1,66392:1,66729:1 6 6 1.000 1.000 4 TCGA:I 14771131 chr17 43053757 43307926 254170 + 0 GT AG 0 0 ,61744:1,66766:2,68782:1,68864:1,70042:1,70893:1 6 7 1.167 1.000 4 TCGA:I 14771132 chr17 43053757 43318687 264931 + 0 GT AG 0 0 ,63053:1,63451:1,64108:1,64188:1,64238:1,64861:1,65458:1,65590:1,66115:3,66434:1,66636:1,66964:1,69764:1 13 15 1.154 1.000 4 TCGA:I 14771133 chr17 43053757 43488064 434308 + 0 GT AG 0 0 ,63743:1 1 1 1.000 1.000 4 TCGA:I 14771134 chr17 43053757 43500271 446515 + 0 GT AG 0 0 ,69276:1 1 1 1.000 1.000 4 TCGA:I 14771135 chr17 43053840 43055803 1964 + 0 AT AC 0 0 ,63009:1 1 1 1.000 1.000 4 TCGA:I 14771136 chr17 43053899 43465542 411644 + 0 GC AG 0 0 ,63053:1 1 1 1.000 1.000 4 TCGA:I 14771137 chr17 43053946 43446240 392295 + 0 GC AG 0 0 ,62330:1,65107:1,66380:2,66497:2,67090:1,68134:2 6 9 1.500 1.500 4 TCGA:I 14771138 chr17 43053967 43057051 3085 - 0 GT AG 0 aC19,cG19,cG38,gC19,gC38,kG19,kG38,mG19,mG38,rG19,rG38,sG19,sG38,vG19 ,62803:2,66640:2,67216:1 3 5 1.667 2.000 4 TCGA:I 14771139 chr17 43054084 43082435 28352 - 0 GC AG 0 0 ,60472:1 1 1 1.000 1.000 4 TCGA:I 14771140 chr17 43054203 43055454 1252 - 0 GC AG 0 0 ,60833:1 1 1 1.000 1.000 4 TCGA:I 14771141 chr17 43054203 43055591 1389 - 0 GC AG 0 0 ,60833:1 1 1 1.000 1.000 4 TCGA:I 14771142 chr17 43054292 43056078 1787 + 0 GC AG 0 0 ,70164:6 1 6 6.000 6.000 4 TCGA:I 14771143 chr17 43054400 43074341 19942 - 0 GC AG 0 0 ,63241:1 1 1 1.000 1.000 4 TCGA:I 14771144 chr17 43054409 43057051 2643 - 0 GT AG 0 aC19,cG19,cG38,gC19,gC38,kG19,kG38,mG19,mG38,rG19,rG38,sG19,sG38,vG19 ,61948:1,64986:1,66066:1,67758:1 4 4 1.000 1.000 4 TCGA:I 14771145 chr17 43054443 43193398 138956 - 0 AT AC 0 0 ,61563:1,61835:1,63700:2,64844:1,67943:1,68775:1,70457:1,70607:1 8 9 1.125 1.000 4 TCGA:I 14771146 chr17 43054474 43055600 1127 + 0 AT AC 0 0 ,69076:1 1 1 1.000 1.000 4 TCGA:I 14771147 chr17 43054476 43055602 1127 - 0 AT AC 0 0 ,69076:1 1 1 1.000 1.000 4 TCGA:I 14771148 chr17 43054485 43054651 167 + 0 GC AG 0 0 ,61890:1,65476:2 2 3 1.500 1.500 4 TCGA:I 14771149 chr17 43054485 43056218 1734 + 0 GC AG 0 0 ,63216:1 1 1 1.000 1.000 4 TCGA:I 14771150 chr17 43054528 43055759 1232 - 0 GT AG 0 0 ,71001:1 1 1 1.000 1.000 4 TCGA:I 14771151 chr17 43054570 43055102 533 + 0 GC AG 0 0 ,59933:1,60086:1,60492:1,60988:1,61597:1,63210:1,64645:1,65075:1,65317:1,67181:1 10 10 1.000 1.000 4 TCGA:I 14771152 chr17 43054571 43056594 2024 - 0 GC AG 0 0 ,62659:1 1 1 1.000 1.000 4 TCGA:I 14771153 chr17 43054788 43066862 12075 + 0 GC AG 0 0 ,63703:1 1 1 1.000 1.000 4 TCGA:I 14771154 chr17 43054829 43055250 422 + 0 GC AG 0 0 ,62888:1 1 1 1.000 1.000 4 TCGA:I 14771155 chr17 43054876 43055149 274 - 0 GC AG 0 0 ,66976:1 1 1 1.000 1.000 4 TCGA:I 14771156 chr17 43054880 43055536 657 + 0 GC AG 0 0 ,68805:3 1 3 3.000 3.000 4 TCGA:I 14771157 chr17 43054881 43055537 657 - 0 GC AG 0 0 ,68805:3 1 3 3.000 3.000 4 TCGA:I 14771158 chr17 43054893 43055689 797 + 0 GT AG 0 0 ,64976:1 1 1 1.000 1.000 4 TCGA:I 14771159 chr17 43054893 43133912 79020 + 0 GT AG 0 0 ,62755:1 1 1 1.000 1.000 4 TCGA:I 14771160 chr17 43054942 43055566 625 - 0 AT AC 0 0 ,60769:1 1 1 1.000 1.000 4 TCGA:I 14771161 chr17 43054962 43055067 106 - 0 GC AG 0 0 ,69197:1 1 1 1.000 1.000 4 TCGA:I 14771162 chr17 43054981 43055548 568 - 0 GC AG 0 0 ,70757:1 1 1 1.000 1.000 4 TCGA:I 14771163 chr17 43054999 43473102 418104 - 0 GC AG 0 0 ,59832:1,60706:1,61508:1,63165:1,63382:1,64438:1,64848:1,67970:1,68155:1 9 9 1.000 1.000 4 TCGA:I 14771164 chr17 43055028 43376557 321530 + 0 GT AG 0 0 ,62631:1 1 1 1.000 1.000 4 TCGA:I 14771165 chr17 43055049 43138840 83792 - 0 GC AG 0 0 ,68061:1 1 1 1.000 1.000 4 TCGA:I 14771166 chr17 43055157 43071046 15890 + 0 GT AG 0 0 ,62230:1,70417:1 2 2 1.000 1.000 4 TCGA:I 14771167 chr17 43055312 43061702 6391 - 0 GC AG 0 0 ,65530:1 1 1 1.000 1.000 4 TCGA:I 14771168 chr17 43055367 43055830 464 + 0 GC AG 0 0 ,60585:1 1 1 1.000 1.000 4 TCGA:I 14771169 chr17 43055367 43055973 607 + 0 GC AG 0 0 ,66455:1 1 1 1.000 1.000 4 TCGA:I 14771170 chr17 43055367 43056552 1186 + 0 GC AG 0 0 ,65173:1 1 1 1.000 1.000 4 TCGA:I 14771171 chr17 43055384 43055656 273 + 0 AT AC 0 0 ,63009:1 1 1 1.000 1.000 4 TCGA:I 14771172 chr17 43055411 43055547 137 + 0 GC AG 0 0 ,61553:1 1 1 1.000 1.000 4 TCGA:I 14771173 chr17 43055411 43055830 420 + 0 GC AG 0 0 ,61160:1,66795:1,68176:1 3 3 1.000 1.000 4 TCGA:I 14771174 chr17 43055417 43055836 420 + 0 GC AG 0 0 ,63128:1,66795:1 2 2 1.000 1.000 4 TCGA:I 14771175 chr17 43055435 43055869 435 + 0 GC AG 0 0 ,65857:1 1 1 1.000 1.000 4 TCGA:I 14771176 chr17 43055449 43055836 388 + 0 GC AG 0 0 ,60688:1 1 1 1.000 1.000 4 TCGA:I 14771177 chr17 43055449 43125021 69573 + 0 GC AG 0 0 ,63619:2 1 2 2.000 2.000 4 TCGA:I 14771178 chr17 43055449 43377080 321632 + 0 GC AG 0 0 ,62486:1,66756:1,67636:1,68679:1 4 4 1.000 1.000 4 TCGA:I 14771179 chr17 43055455 43055591 137 - 0 GC AG 0 0 ,64048:1,64707:1 2 2 1.000 1.000 4 TCGA:I 14771180 chr17 43055455 43056427 973 - 0 GC AG 0 0 ,64252:1 1 1 1.000 1.000 4 TCGA:I 14771181 chr17 43055455 43056472 1018 - 0 GC AG 0 0 ,66778:1 1 1 1.000 1.000 4 TCGA:I 14771182 chr17 43055455 43377086 321632 - 0 GC AG 0 0 ,61204:1,62486:1,62828:1,62846:1,63291:1,66986:1,68679:1 7 7 1.000 1.000 4 TCGA:I 14771183 chr17 43055464 43055600 137 + 0 AT AC 0 0 ,64048:1,64707:1,65173:1 3 3 1.000 1.000 4 TCGA:I 14771184 chr17 43055464 43055767 304 + 0 AT AC 0 0 ,60833:1 1 1 1.000 1.000 4 TCGA:I 14771185 chr17 43055464 43056486 1023 + 0 AT AC 0 0 ,62330:4 1 4 4.000 4.000 4 TCGA:I 14771186 chr17 43055549 43066710 11162 - 0 GC AG 0 0 ,63818:1 1 1 1.000 1.000 4 TCGA:I 14771187 chr17 43055572 43540239 484668 + 0 GT AG 0 0 ,59826:1,63166:1,63295:1,68117:1 4 4 1.000 1.000 4 TCGA:I 14771188 chr17 43055601 43055767 167 + 0 AT AC 0 0 ,60833:1,69085:2 2 3 1.500 1.500 4 TCGA:I 14771189 chr17 43055653 43055689 37 + 0 GC AG 0 0 ,60924:1 1 1 1.000 1.000 4 TCGA:I 14771190 chr17 43055661 43055807 147 - 0 GC AG 0 0 ,68660:1 1 1 1.000 1.000 4 TCGA:I 14771191 chr17 43055661 43056324 664 - 0 GC AG 0 0 ,71001:1 1 1 1.000 1.000 4 TCGA:I 14771192 chr17 43055661 43511204 455544 - 0 GC AG 0 0 ,60947:1 1 1 1.000 1.000 4 TCGA:I 14771193 chr17 43055759 43055912 154 - 0 GC AG 0 0 ,67261:1 1 1 1.000 1.000 4 TCGA:I 14771194 chr17 43055804 43056320 517 + 0 AT AC 0 0 ,60429:2,60688:1,68116:1 3 4 1.333 1.000 4 TCGA:I 14771195 chr17 43055808 43056324 517 - 0 GC AG 0 0 ,60429:2,60688:1,68116:1 3 4 1.333 1.000 4 TCGA:I 14771196 chr17 43055831 43055869 39 + 0 GC AG 0 0 ,64830:1 1 1 1.000 1.000 4 TCGA:I 14771197 chr17 43055913 43056645 733 - 0 GC AG 0 0 ,69231:1,69339:1 2 2 1.000 1.000 4 TCGA:I 14771198 chr17 43056146 43057086 941 - 0 GT AG 0 0 ,62516:1 1 1 1.000 1.000 4 TCGA:I 14771199 chr17 43056230 43056662 433 + 0 GT AG 0 0 ,61374:1 1 1 1.000 1.000 4 TCGA:I 14771200 chr17 43056294 43056327 34 - 0 GT AG 0 0 ,64850:1 1 1 1.000 1.000 4 TCGA:I 14771201 chr17 43056333 43065123 8791 - 0 GC AG 0 0 ,62931:1 1 1 1.000 1.000 4 TCGA:I 14771202 chr17 43056415 43481421 425007 + 0 GC AG 0 0 ,62312:1 1 1 1.000 1.000 4 TCGA:I 14771203 chr17 43056424 43481430 425007 - 0 GC AG 0 0 ,62312:1 1 1 1.000 1.000 4 TCGA:I 14771204 chr17 43056428 43130562 74135 - 0 GC AG 0 0 ,65662:1 1 1 1.000 1.000 4 TCGA:I 14771205 chr17 43056428 43481434 425007 - 0 GC AG 0 0 ,62312:1 1 1 1.000 1.000 4 TCGA:I 14771206 chr17 43056513 43056645 133 - 0 GC AG 0 0 ,62659:1 1 1 1.000 1.000 4 TCGA:I 14771207 chr17 43056535 43056721 187 + 0 AT AC 0 0 ,61124:2 1 2 2.000 2.000 4 TCGA:I 14771208 chr17 43056559 43479447 422889 + 0 GC AG 0 0 ,64927:1 1 1 1.000 1.000 4 TCGA:I 14771209 chr17 43056595 43056834 240 - 0 GC AG 0 0 ,64224:1 1 1 1.000 1.000 4 TCGA:I 14771210 chr17 43056604 43057325 722 + 0 AT AC 0 0 ,65173:1 1 1 1.000 1.000 4 TCGA:I 14771211 chr17 43056646 43057483 838 - 0 GC AG 0 0 ,60777:1 1 1 1.000 1.000 4 TCGA:I 14771212 chr17 43056749 43056834 86 - 0 GC AG 0 0 ,68805:1 1 1 1.000 1.000 4 TCGA:I 14771213 chr17 43057094 43516928 459835 - 0 AT AC sG19,sG38 0 ,70460:1 1 1 1.000 1.000 4 TCGA:I 14771214 chr17 43057098 43057659 562 - 0 GT AG 0 0 ,63991:1 1 1 1.000 1.000 4 TCGA:I 14771215 chr17 43057133 43063332 6200 + 0 AT AC 0 aC19,cG19,cG38,gC19,gC38,kG19,kG38,mG19,mG38,rG19,rG38,sG19,sG38,vG19 ,60157:1,68984:1 2 2 1.000 1.000 4 TCGA:I 14771216 chr17 43057135 43092787 35653 + 0 GC AG 0 0 ,60702:1 1 1 1.000 1.000 4 TCGA:I 14771217 chr17 43057136 43057247 112 - 0 GT AG 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1.000 1.000 4 TCGA:I 14771232 chr17 43057136 43125276 68141 - 0 GT AG aC19,cG19,cG38,gC19,gC38,kG19,kG38,mG19,mG38,rG19,rG38,sG19,sG38,vG19 aC19,gC19,gC38,kG19,kG38,rG19,rG38,sG38,vG19 ,61247:1,65626:1,65734:1 3 3 1.000 1.000 4 TCGA:I 14771233 chr17 43057136 43542970 485835 - 0 GT AG aC19,cG19,cG38,gC19,gC38,kG19,kG38,mG19,mG38,rG19,rG38,sG19,sG38,vG19 0 ,70579:1 1 1 1.000 1.000 4 TCGA:I 14771234 chr17 43057221 43058051 831 + 0 GC AG 0 0 ,60799:1,64850:1,67090:1 3 3 1.000 1.000 4 TCGA:I 14771235 chr17 43057221 43058072 852 + 0 GC AG 0 0 ,68106:2 1 2 2.000 2.000 4 TCGA:I 14771236 chr17 43057229 43058059 831 + 0 GC AG 0 0 ,60799:1,64850:1,67090:1,69185:5 4 8 2.000 1.000 4 TCGA:I 14771237 chr17 43057250 43057385 136 - 0 GT AG 0 0 ,59923:1,60196:1,60500:1,61946:1,62659:1,62884:1,63007:1,63040:1,64707:3,65778:1,67192:1,67627:1,68328:2 13 16 1.231 1.000 4 TCGA:I 14771238 chr17 43057250 43057710 461 - 0 GC AG 0 0 ,68829:1 1 1 1.000 1.000 4 TCGA:I 14771239 chr17 43057250 43058100 851 - 0 GT AG 0 0 ,66976:3,67181:1,70470:1 3 5 1.667 1.000 4 TCGA:I 14771240 chr17 43057279 43058137 859 + 0 GC AG 0 0 ,70310:1 1 1 1.000 1.000 4 TCGA:I 14771241 chr17 43057317 43494526 437210 - 0 GC AG 0 0 ,62316:1 1 1 1.000 1.000 4 TCGA:I 14771242 chr17 43057326 43063120 5795 + 0 AT AC 0 0 ,69435:1 1 1 1.000 1.000 4 TCGA:I 14771243 chr17 43057336 43062735 5400 - 0 GT AG 0 0 ,60414:1 1 1 1.000 1.000 4 TCGA:I 14771244 chr17 43057336 43181810 124475 - 0 GT AG 0 0 ,67583:1 1 1 1.000 1.000 4 TCGA:I 14771245 chr17 43057343 43058223 881 - 0 GT AG 0 0 ,61767:1 1 1 1.000 1.000 4 TCGA:I 14771246 chr17 43057343 43063332 5990 - 0 GT AG 0 aC19,cG19,cG38,gC19,gC38,kG19,kG38,mG19,mG38,rG19,rG38,sG19,sG38,vG19 ,63052:1 1 1 1.000 1.000 4 TCGA:I 14771247 chr17 43057346 43063332 5987 - 0 GT AG 0 aC19,cG19,cG38,gC19,gC38,kG19,kG38,mG19,mG38,rG19,rG38,sG19,sG38,vG19 ,60472:1 1 1 1.000 1.000 4 TCGA:I 14771248 chr17 43057378 43057414 37 + 0 GC AG 0 0 ,61139:1,64606:1 2 2 1.000 1.000 4 TCGA:I 14771249 chr17 43057382 43057418 37 + 0 GC AG 0 0 ,61139:1 1 1 1.000 1.000 4 TCGA:I 14771250 chr17 43057409 43058131 723 + 0 GC AG 0 0 ,70303:1 1 1 1.000 1.000 4 TCGA:I 14771251 chr17 43057415 43057923 509 + 0 GC AG 0 0 ,69403:1 1 1 1.000 1.000 4 TCGA:I 14771252 chr17 43057560 43058485 926 + 0 GT AG 0 0 ,61964:8 1 8 8.000 8.000 4 TCGA:I 14771253 chr17 43057576 43057710 135 - 0 GC AG 0 0 ,68855:1 1 1 1.000 1.000 4 TCGA:I 14771254 chr17 43057695 43058232 538 + 0 GT AG 0 0 ,64335:1 1 1 1.000 1.000 4 TCGA:I 14771255 chr17 43057695 43324658 266964 + 0 GT AG 0 0 ,64523:1 1 1 1.000 1.000 4 TCGA:I 14771256 chr17 43057879 43059624 1746 + 0 GC AG 0 0 ,63266:1 1 1 1.000 1.000 4 TCGA:I 14771257 chr17 43057993 43058346 354 - 0 GC AG 0 0 ,65117:1 1 1 1.000 1.000 4 TCGA:I 14771258 chr17 43058052 43479948 421897 + 0 GC AG 0 0 ,66214:1 1 1 1.000 1.000 4 TCGA:I 14771259 chr17 43058101 43060487 2387 - 0 GT AG 0 0 ,70224:1 1 1 1.000 1.000 4 TCGA:I 14771260 chr17 43058249 43120639 62391 - 0 GC AG 0 0 ,60319:1 1 1 1.000 1.000 4 TCGA:I 14771261 chr17 43058347 43063332 4986 - 0 GT AG 0 aC19,cG19,cG38,gC19,gC38,kG19,kG38,mG19,mG38,rG19,rG38,sG19,sG38,vG19 ,65560:1 1 1 1.000 1.000 4 TCGA:I 14771262 chr17 43058347 43537668 479322 - 0 GC AG 0 0 ,60668:1,60868:1,62149:1,62328:1,63256:1,63319:1,64287:1,65057:1,65797:1,69832:1,70277:1 11 11 1.000 1.000 4 TCGA:I 14771263 chr17 43058367 43063332 4966 - 0 GT AG 0 aC19,cG19,cG38,gC19,gC38,kG19,kG38,mG19,mG38,rG19,rG38,sG19,sG38,vG19 ,59773:1,59803:1,59827:4,59834:1,59845:1,59878:1,59903:1,59909:2,59920:1,60010:1,60146:1,60189:1,60234:1,60252:2,60386:1,60500:1,60590:1,60644:1,60659:1,60731:1,60840:1,60861:1,60881:1,60921:1,60952:1,60991:1,60998:1,61010:2,61041:1,61052:1,61057:1,61216:1,61225:1,61250:1,61322:1,61373:1,61607:1,61623:1,61629:1,61754:1,61772:1,61776:1,61784:1,61799:1,61810:1,61916:1,62012:4,62050:2,62067:1,62237:1,62332:1,62382:1,62384:1,62385:4,62393:1,62395:1,62435:1,62492:1,62496:1,62553:1,62577:1,62582:1,62662:1,62688:1,62715:1,62806:4,62843:1,62845:1,62871:1,62878:1,63052:1,63059:1,63106:1,63124:1,63157:1,63188:1,63200:1,63257:1,63534:1,63549:1,63576:1,63801:1,63896:1,63958:1,64050:1,64052:1,64064:1,64094:1,64146:1,64148:1,64214:1,64252:1,64261:1,64403:2,64599:1,64664:1,64668:1,64737:1,64782:1,64793:1,64830:1,64905:1,64976:3,65037:1,65075:1,65194:1,65268:1,65323:1,65324:1,65326:1,65392:1,65397:1,65398:1,65402:1,65423:3,65452:1,65518:1,65612:1,65615:1,65629:1,65672:1,65687:1,65723:2,65756:1,65815:1,65816:1,65858:1,65979:1,65991:1,66091:1,66147:1,66156:1,66172:1,66252:1,66272:1,66341:1,66345:1,66539:1,66819:1,66976:2,67035:1,67124:1,67130:1,67150:1,67162:1,67163:1,67185:1,67189:1,67217:1,67232:1,67261:1,67275:1,67279:1,67338:1,67347:1,67389:1,67407:1,67453:1,67462:1,67480:2,67502:1,67554:1,67620:1,67634:1,67663:2,67672:1,67692:2,67703:1,67857:1,67939:1,68004:1,68146:1,68170:1,68182:2,68187:1,68307:1,68308:1,68393:1,68413:1,68415:1,68419:2,68456:1,68478:1,68511:1,68526:1,68566:1,68633:1,68731:2,68789:1,68798:1,68856:1,68860:3,68910:1,68977:2,68998:1,69001:1,69045:1,69198:1,69215:1,69416:1,69422:1,69483:1,69527:1,69534:1,69543:1,69587:1,69762:1,69776:1,69794:2,69873:2,69902:4,69998:1,70051:1,70064:1,70073:1,70095:1,70106:1,70149:1,70235:1,70434:1,70436:1,70541:1,70629:1,70665:1,70689:1,70760:1,70764:1,70776:1,70800:2,70855:1,70921:1,70940:1,70966:1,70969:1,71047:1,71061:1,71073:1,71088:1 238 276 1.160 1.000 4 TCGA:I 14771264 chr17 43058370 43063332 4963 - 0 GT AG 0 aC19,cG19,cG38,gC19,gC38,kG19,kG38,mG19,mG38,rG19,rG38,sG19,sG38,vG19 ,60181:1,60258:1,60505:1,60653:1,60842:1,60988:1,61057:1,61172:1,61239:1,61258:1,61274:1,61419:1,61596:1,61740:2,61839:1,62071:1,62122:1,62262:1,62368:1,62414:1,62591:1,62747:1,62892:1,63009:1,63127:1,63169:1,63199:1,63222:1,63246:1,63319:1,63328:1,63375:2,63596:1,63739:1,63751:1,63876:1,63956:1,64022:1,64032:2,64058:2,64077:1,64207:1,64214:2,64294:1,64390:1,64645:1,64723:1,64976:2,65040:2,65144:1,65236:1,65377:1,65414:1,65462:1,65573:1,65604:1,65644:1,65708:1,65769:1,65948:1,65988:1,66066:1,66088:1,66131:1,66212:1,66252:1,66458:1,66509:1,66616:3,66822:2,66868:1,66917:1,66930:1,67081:1,67167:1,67185:1,67198:1,67232:1,67270:1,67317:2,67421:1,67562:1,67620:2,67808:1,67814:1,67857:1,68014:1,68117:1,68423:1,68453:1,68503:1,68517:1,68643:1,68713:1,68754:1,68760:1,68843:1,68932:2,68994:1,69151:1,69228:1,69291:1,69394:1,69493:1,69557:1,69608:1,69889:2,69924:2,69998:2,70228:1,70327:1,70427:1,70549:1,70737:1,70742:1,70804:2,70914:1,70966:1,70988:1 119 136 1.143 1.000 4 TCGA:I 14771265 chr17 43058433 43063332 4900 - 0 GT AG 0 aC19,cG19,cG38,gC19,gC38,kG19,kG38,mG19,mG38,rG19,rG38,sG19,sG38,vG19 ,61353:1 1 1 1.000 1.000 4 TCGA:I 14771266 chr17 43058486 43059409 924 + 0 GT AG 0 0 ,63706:1 1 1 1.000 1.000 4 TCGA:I 14771267 chr17 43059183 43059361 179 + 0 GC AG 0 0 ,65492:1 1 1 1.000 1.000 4 TCGA:I 14771268 chr17 43059204 43060865 1662 - 0 GT AG 0 0 ,71015:1 1 1 1.000 1.000 4 TCGA:I 14771269 chr17 43059204 43067122 7919 - 0 GT AG 0 0 ,63326:1 1 1 1.000 1.000 4 TCGA:I 14771270 chr17 43059271 43060436 1166 - 0 GC AG 0 0 ,66464:2 1 2 2.000 2.000 4 TCGA:I 14771271 chr17 43059368 43060048 681 + 0 GC AG 0 0 ,65870:2 1 2 2.000 2.000 4 TCGA:I 14771272 chr17 43059393 43202109 142717 + 0 GC AG 0 0 ,59995:1,62387:1,66038:1,69167:1,69424:1 5 5 1.000 1.000 4 TCGA:I 14771273 chr17 43059399 43202115 142717 + 0 GT AG 0 0 ,59995:1,62387:1,66038:1,69167:1,69424:1 5 5 1.000 1.000 4 TCGA:I 14771274 chr17 43059526 43491179 431654 - 0 GT AG 0 0 ,64999:1 1 1 1.000 1.000 4 TCGA:I 14771275 chr17 43059859 43059993 135 - 0 GC AG 0 0 ,61336:1 1 1 1.000 1.000 4 TCGA:I 14771276 chr17 43059952 43065639 5688 - 0 GC AG 0 0 ,66899:1 1 1 1.000 1.000 4 TCGA:I 14771277 chr17 43060049 43060319 271 + 0 GC AG 0 0 ,62521:1 1 1 1.000 1.000 4 TCGA:I 14771278 chr17 43060055 43060141 87 + 0 GC AG 0 0 ,64525:1 1 1 1.000 1.000 4 TCGA:I 14771279 chr17 43060091 43060513 423 + 0 AT AC 0 0 ,64519:1 1 1 1.000 1.000 4 TCGA:I 14771280 chr17 43060159 43060761 603 - 0 GC AG 0 0 ,68382:1 1 1 1.000 1.000 4 TCGA:I 14771281 chr17 43060194 43060761 568 - 0 GC AG 0 0 ,70495:1 1 1 1.000 1.000 4 TCGA:I 14771282 chr17 43060194 43145446 85253 - 0 GC AG 0 0 ,67848:1 1 1 1.000 1.000 4 TCGA:I 14771283 chr17 43060194 43204057 143864 - 0 GC AG 0 0 ,64269:2 1 2 2.000 2.000 4 TCGA:I 14771284 chr17 43060217 43060633 417 + 0 GC AG 0 0 ,61982:1 1 1 1.000 1.000 4 TCGA:I 14771285 chr17 43060399 43060536 138 + 0 GC AG 0 0 ,64976:1 1 1 1.000 1.000 4 TCGA:I 14771286 chr17 43060419 43060737 319 - 0 GT AG 0 0 ,64607:1 1 1 1.000 1.000 4 TCGA:I 14771287 chr17 43060443 43060761 319 - 0 GC AG 0 0 ,60316:1,61591:1,63921:1,65573:1,67185:1,67956:1,68176:1,68201:1 8 8 1.000 1.000 4 TCGA:I 14771288 chr17 43060451 43060633 183 + 0 GT AG 0 0 ,65944:1 1 1 1.000 1.000 4 TCGA:I 14771289 chr17 43060466 43063167 2702 + 0 GT AG 0 0 ,60585:1,61487:1,67401:1 3 3 1.000 1.000 4 TCGA:I 14771290 chr17 43060466 43149512 89047 + 0 GT AG 0 0 ,61662:1,61685:1,63615:1,64816:1,65327:1,68865:1,69906:1,70683:1 8 8 1.000 1.000 4 TCGA:I 14771291 chr17 43060548 43061109 562 + 0 GT AG 0 0 ,68977:2 1 2 2.000 2.000 4 TCGA:I 14771292 chr17 43060601 43061416 816 - 0 GT AG 0 0 ,67022:2 1 2 2.000 2.000 4 TCGA:I 14771293 chr17 43060605 43061201 597 - 0 GC AG 0 0 ,62862:1 1 1 1.000 1.000 4 TCGA:I 14771294 chr17 43060605 43061696 1092 - 0 GC AG 0 0 ,69032:1 1 1 1.000 1.000 4 TCGA:I 14771295 chr17 43060733 43060932 200 - 0 GC AG 0 0 ,63476:2 1 2 2.000 2.000 4 TCGA:I 14771296 chr17 43060752 43432942 372191 - 0 GC AG 0 0 ,61146:1,64822:1,66156:1,69465:1,70091:1 5 5 1.000 1.000 4 TCGA:I 14771297 chr17 43060756 43432946 372191 - 0 GC AG 0 0 ,61146:1,64822:1,66156:1,69465:1,70091:1 5 5 1.000 1.000 4 TCGA:I 14771298 chr17 43060858 43061483 626 + 0 GC AG 0 0 ,61420:1 1 1 1.000 1.000 4 TCGA:I 14771299 chr17 43061030 43061725 696 + 0 GC AG 0 0 ,69300:1,70807:1 2 2 1.000 1.000 4 TCGA:I 14771300 chr17 43061703 43062349 647 - 0 GC AG 0 0 ,63241:1 1 1 1.000 1.000 4 TCGA:I 14771301 chr17 43061863 43103048 41186 + 0 GC AG 0 0 ,59782:3,60856:1,60900:1,61709:1,63580:1,64230:1,65456:1,67140:1,67427:1,67620:1,70592:2 11 14 1.273 1.000 4 TCGA:I 14771302 chr17 43062174 43112796 50623 + 0 GC AG 0 0 ,66840:1 1 1 1.000 1.000 4 TCGA:I 14771303 chr17 43062195 43062832 638 + 0 GT AG 0 0 ,69036:1 1 1 1.000 1.000 4 TCGA:I 14771304 chr17 43062208 43170157 107950 - 0 GC AG 0 0 ,70545:1 1 1 1.000 1.000 4 TCGA:I 14771305 chr17 43062306 43062807 502 + 0 GC AG 0 0 ,60585:1 1 1 1.000 1.000 4 TCGA:I 14771306 chr17 43062306 43063100 795 + 0 GC AG 0 0 ,59808:1,70872:1 2 2 1.000 1.000 4 TCGA:I 14771307 chr17 43062350 43062717 368 - 0 GC AG 0 0 ,62976:1,69756:1 2 2 1.000 1.000 4 TCGA:I 14771308 chr17 43062350 43063010 661 - 0 GC AG 0 0 ,61848:1 1 1 1.000 1.000 4 TCGA:I 14771309 chr17 43062350 43320767 258418 - 0 GC AG 0 0 ,70380:1,70516:1 2 2 1.000 1.000 4 TCGA:I 14771310 chr17 43062712 43063004 293 - 0 GC AG 0 0 ,66989:1 1 1 1.000 1.000 4 TCGA:I 14771311 chr17 43062718 43063010 293 - 0 GC AG 0 0 ,66989:1 1 1 1.000 1.000 4 TCGA:I 14771312 chr17 43062799 43063091 293 - 0 AT AC 0 0 ,59761:1,69798:1 2 2 1.000 1.000 4 TCGA:I 14771313 chr17 43062808 43063100 293 + 0 GC AG 0 0 ,59761:1 1 1 1.000 1.000 4 TCGA:I 14771314 chr17 43062875 43063167 293 + 0 GC AG 0 0 ,63133:1 1 1 1.000 1.000 4 TCGA:I 14771315 chr17 43062936 43460845 397910 + 0 GT AG 0 0 ,61736:2,64090:1,64709:1,67884:1,68253:1,69232:1 6 7 1.167 1.000 4 TCGA:I 14771316 chr17 43063011 43063144 134 - 0 GC AG 0 0 ,61318:1 1 1 1.000 1.000 4 TCGA:I 14771317 chr17 43063139 43102603 39465 - 0 GC AG 0 0 ,67826:1 1 1 1.000 1.000 4 TCGA:I 14771318 chr17 43063145 43102609 39465 - 0 GC AG 0 0 ,67826:1 1 1 1.000 1.000 4 TCGA:I 14771319 chr17 43063168 43103599 40432 + 0 GT AG 0 0 ,66251:1 1 1 1.000 1.000 4 TCGA:I 14771320 chr17 43063208 43063332 125 - 0 GT AG 0 aC19,cG19,cG38,gC19,gC38,kG19,kG38,mG19,mG38,rG19,rG38,sG19,sG38,vG19 ,70933:1 1 1 1.000 1.000 4 TCGA:I 14771321 chr17 43063363 43063882 520 - 0 GC AG 0 0 ,66795:2 1 2 2.000 2.000 4 TCGA:I 14771322 chr17 43063374 43063682 309 - 0 GT AG aC19,cG19,cG38,gC19,gC38,kG19,kG38,mG19,mG38,rG19,rG38,sG19,sG38,vG19 0 ,60759:1,61196:2,61642:1,63221:1,63628:1,63680:1,64240:1,64777:1,66490:2,66985:1,67113:1,67121:1,67157:1 13 15 1.154 1.000 4 TCGA:I 14771323 chr17 43063374 43063873 500 - 1 GT AG aC19,cG19,cG38,gC19,gC38,kG19,kG38,mG19,mG38,rG19,rG38,sG19,sG38,vG19 aC19,cG19,cG38,gC19,gC38,kG19,kG38,mG19,mG38,rG19,rG38,sG19,sG38,vG19 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,59773:2,59799:1,59806:2,59808:1,59823:3,59833:1,59901:1,59984:1,59997:1,60009:1,60016:1,60022:2,60049:1,60057:1,60191:1,60258:1,60336:1,60485:1,60538:1,60546:1,60554:1,60579:1,60611:1,60647:1,60720:1,60750:1,60766:1,60769:1,60789:2,60823:1,60824:1,60841:2,60886:1,60912:1,60948:2,60955:2,60984:1,61030:1,61084:1,61099:2,61124:2,61151:1,61195:1,61274:1,61308:1,61375:2,61398:1,61413:1,61421:1,61429:1,61442:1,61458:1,61520:1,61533:1,61544:1,61581:1,61612:1,61642:2,61673:1,61750:1,61751:3,61772:1,61797:1,61995:1,62002:1,62035:1,62110:1,62137:1,62161:1,62168:1,62353:1,62377:1,62395:2,62407:1,62417:1,62447:1,62500:1,62501:1,62510:1,62559:1,62562:1,62609:3,62662:1,62718:1,62725:2,62765:1,62770:1,62791:1,62803:1,62807:2,62815:1,62860:1,62887:1,62931:1,62962:1,62968:1,62996:1,63015:1,63017:1,63045:1,63133:1,63162:1,63183:1,63195:1,63211:1,63214:1,63244:1,63254:1,63296:1,63302:1,63334:1,63359:1,63380:1,63397:1,63401:1,63413:1,63419:1,63422:1,63428:1,63476:3,63518:1,63622:1,63647:1,63656:1,63688:1,63768:1,63797:2,63812:1,63833:1,63850:1,63865:1,63891:2,63898:1,63905:2,64025:2,64051:1,64054:2,64063:1,64127:1,64214:1,64332:2,64333:1,64376:1,64390:1,64421:1,64429:1,64438:1,64450:1,64460:2,64472:1,64475:1,64510:1,64608:1,64615:1,64641:1,64669:1,64679:1,64797:1,64818:1,64838:1,64862:1,64885:1,64942:1,64950:1,64969:1,65039:1,65040:1,65070:1,65116:3,65167:1,65168:1,65211:1,65214:1,65239:1,65240:1,65272:1,65323:1,65378:1,65391:1,65415:1,65446:1,65462:1,65508:1,65523:1,65592:1,65594:1,65631:1,65727:1,65730:1,65778:2,65798:1,65860:1,65867:1,65870:1,65955:1,66099:1,66164:2,66184:3,66212:1,66213:2,66231:1,66276:1,66289:2,66291:1,66331:1,66414:1,66416:1,66441:1,66493:3,66517:1,66523:1,66543:1,66548:1,66555:1,66557:1,66570:1,66585:1,66604:1,66612:1,66617:2,66671:1,66699:2,66721:1,66737:2,66749:1,66767:1,66888:1,66929:1,66980:1,67025:1,67051:1,67084:1,67090:2,67148:1,67185:1,67198:1,67210:1,67242:1,67247:1,67294:1,67344:1,67367:1,67408:1,67412:2,67413:2,67453:1,67502:1,67599:1,67671:1,67689:1,67736:1,67737:2,67880:1,67882:1,67907:1,67930:2,67939:2,67943:1,68012:2,68024:1,68066:2,68089:2,68136:1,68147:1,68170:2,68188:1,68245:1,68285:1,68307:1,68318:1,68322:1,68337:1,68347:1,68374:1,68417:1,68428:1,68457:1,68459:1,68461:1,68503:1,68515:1,68522:1,68523:1,68542:1,68579:1,68584:1,68589:1,68602:1,68643:1,68664:1,68691:1,68696:1,68700:1,68730:1,68731:2,68732:1,68745:1,68762:2,68779:1,68801:1,68814:1,68818:1,68830:1,68898:1,68927:1,68967:1,68978:2,69005:1,69010:1,69034:1,69052:1,69055:1,69056:1,69091:1,69119:1,69131:1,69135:1,69148:1,69202:1,69254:1,69307:1,69355:1,69361:2,69477:1,69523:1,69526:1,69535:1,69537:1,69541:1,69544:4,69559:2,69661:1,69901:1,69935:1,69998:1,70053:1,70054:1,70064:1,70072:1,70093:1,70101:1,70107:1,70166:1,70190:1,70220:1,70277:1,70285:1,70288:1,70365:1,70373:1,70402:1,70457:2,70460:1,70509:1,70537:2,70542:1,70558:1,70570:1,70621:1,70635:1,70692:1,70693:1,70703:1,70750:1,70763:1,70804:1,70807:1,70862:1,70876:1,71028:1,71063:1,71087:1,71093:1 373 435 1.166 1.000 4 TCGA:I 14771347 chr17 43063952 43076487 12536 - 0 GT AG aC19,cG19,cG38,gC19,gC38,kG19,kG38,mG19,mG38,rG19,rG38,sG19,sG38,vG19 aC19,cG19,cG38,gC19,gC38,kG19,kG38,mG19,mG38,rG19,rG38,sG19,sG38,vG19 ,59827:1,60344:1,60375:1,60429:1,60448:1,62725:2,62863:1,63133:1,63245:1,63836:1,63852:1,64303:1,64872:4,65911:1,66060:1,66113:2,66317:1,66992:1,68516:1,68654:1,69261:1,69870:1,70056:1,70641:1,70834:1 25 30 1.200 1.000 4 TCGA:I 14771348 chr17 43063952 43082403 18452 - 1 GT AG aC19,cG19,cG38,gC19,gC38,kG19,kG38,mG19,mG38,rG19,rG38,sG19,sG38,vG19 aC19,cG19,cG38,gC19,gC38,kG19,kG38,mG19,mG38,rG19,rG38,sG19,sG38,vG19 ,59806:1,61314:1,61413:1,61738:1,61880:1,62141:2,62405:1,62669:2,63176:2,63386:1,63700:1,64739:1,65187:1,65498:1,65730:1,66231:1,66261:1,66327:1,66401:1,66462:2,66741:1,66940:2,67112:1,67698:1,68099:1,68132:1,68169:1,68353:1,69015:1,69052:1,69413:1,69661:1,70501:1,70862:1 34 39 1.147 1.000 4 TCGA:I 14771349 chr17 43063952 43099774 35823 - 0 GT AG aC19,cG19,cG38,gC19,gC38,kG19,kG38,mG19,mG38,rG19,rG38,sG19,sG38,vG19 aC19,cG19,cG38,gC19,gC38,kG19,kG38,mG19,mG38,rG19,rG38,sG19,sG38,vG19 ,63793:2,66864:1 2 3 1.500 1.500 4 TCGA:I 14771350 chr17 43063952 43124016 60065 - 0 GT AG aC19,cG19,cG38,gC19,gC38,kG19,kG38,mG19,mG38,rG19,rG38,sG19,sG38,vG19 aC19,cG19,cG38,gC19,gC38,kG19,kG38,mG19,mG38,rG19,rG38,sG19,sG38,vG19 ,59887:1 1 1 1.000 1.000 4 TCGA:I 14771351 chr17 43063952 43125181 61230 - 1 GT AG aC19,cG19,cG38,gC19,gC38,kG19,kG38,mG19,mG38,rG19,rG38,sG19,sG38,vG19 aC19,gC19,gC38,kG19,kG38,rG19,rG38,sG19,sG38,vG19 ,69528:1 1 1 1.000 1.000 4 TCGA:I 14771352 chr17 43063952 43125270 61319 - 0 GT AG aC19,cG19,cG38,gC19,gC38,kG19,kG38,mG19,mG38,rG19,rG38,sG19,sG38,vG19 aC19,gC19,gC38,kG19,kG38,mG19,mG38,rG19,rG38,sG19,vG19 ,63484:1 1 1 1.000 1.000 4 TCGA:I 14771353 chr17 43063952 43125276 61325 - 0 GT AG aC19,cG19,cG38,gC19,gC38,kG19,kG38,mG19,mG38,rG19,rG38,sG19,sG38,vG19 aC19,gC19,gC38,kG19,kG38,rG19,rG38,sG38,vG19 ,67811:1,69167:1 2 2 1.000 1.000 4 TCGA:I 14771354 chr17 43063959 43067607 3649 + 0 AT AC 0 aC19,cG19,cG38,gC19,gC38,kG19,kG38,mG19,mG38,rG19,rG38,sG19,sG38,vG19 ,67117:1 1 1 1.000 1.000 4 TCGA:I 14771355 chr17 43064006 43196967 132962 + 0 GC AG 0 0 ,65870:1 1 1 1.000 1.000 4 TCGA:I 14771356 chr17 43064155 43064424 270 + 0 GC AG 0 0 ,63068:1 1 1 1.000 1.000 4 TCGA:I 14771357 chr17 43064378 43067227 2850 - 0 AT AC 0 0 ,60993:1 1 1 1.000 1.000 4 TCGA:I 14771358 chr17 43064647 43418453 353807 + 0 GC AG 0 0 ,62052:1 1 1 1.000 1.000 4 TCGA:I 14771359 chr17 43064695 43064793 99 + 0 GT AG 0 0 ,64001:1 1 1 1.000 1.000 4 TCGA:I 14771360 chr17 43064876 43065042 167 + 0 GC AG 0 0 ,62488:1,67155:1,67811:1 3 3 1.000 1.000 4 TCGA:I 14771361 chr17 43064877 43065484 608 - 0 GT AG 0 0 ,65946:1 1 1 1.000 1.000 4 TCGA:I 14771362 chr17 43064877 43068295 3419 - 0 GT AG 0 0 ,59839:1 1 1 1.000 1.000 4 TCGA:I 14771363 chr17 43064915 43065639 725 - 0 GC AG 0 0 ,64099:1 1 1 1.000 1.000 4 TCGA:I 14771364 chr17 43064919 43065666 748 - 0 GT AG 0 0 ,63241:1 1 1 1.000 1.000 4 TCGA:I 14771365 chr17 43064919 43147277 82359 - 0 GC AG 0 0 ,67671:1,69192:1 2 2 1.000 1.000 4 TCGA:I 14771366 chr17 43064926 43065277 352 - 0 AT AC 0 0 ,64956:2 1 2 2.000 2.000 4 TCGA:I 14771367 chr17 43064930 43065648 719 + 0 AT AC 0 0 ,60833:1 1 1 1.000 1.000 4 TCGA:I 14771368 chr17 43064941 43065580 640 - 0 GC AG 0 0 ,61674:1,62803:2,62842:1,63059:1,63240:1,63241:1,65362:1,69300:1,70710:1 9 10 1.111 1.000 4 TCGA:I 14771369 chr17 43064941 43065586 646 - 0 GT AG 0 0 ,61839:2 1 2 2.000 2.000 4 TCGA:I 14771370 chr17 43064941 43068295 3355 - 0 GT AG 0 0 ,63278:1 1 1 1.000 1.000 4 TCGA:I 14771371 chr17 43064945 43065580 636 - 0 GC AG 0 0 ,64406:2,65362:1 2 3 1.500 1.500 4 TCGA:I 14771372 chr17 43064945 43065666 722 - 0 GT AG 0 0 ,61957:1,68530:1 2 2 1.000 1.000 4 TCGA:I 14771373 chr17 43064951 43065580 630 - 0 GC AG 0 0 ,61616:1,64064:1 2 2 1.000 1.000 4 TCGA:I 14771374 chr17 43064951 43065666 716 - 0 GT AG 0 0 ,69902:1 1 1 1.000 1.000 4 TCGA:I 14771375 chr17 43064954 43065878 925 - 0 GT AG 0 0 ,70846:2 1 2 2.000 2.000 4 TCGA:I 14771376 chr17 43064958 43065550 593 + 0 GT AG 0 0 ,61275:3 1 3 3.000 3.000 4 TCGA:I 14771377 chr17 43064961 43065561 601 + 0 GC AG 0 0 ,66464:1 1 1 1.000 1.000 4 TCGA:I 14771378 chr17 43064962 43065639 678 - 0 GC AG 0 0 ,65339:1 1 1 1.000 1.000 4 TCGA:I 14771379 chr17 43065093 43319917 254825 + 0 GC AG 0 0 ,68280:1 1 1 1.000 1.000 4 TCGA:I 14771380 chr17 43065095 43065561 467 + 0 GC AG 0 0 ,70975:3 1 3 3.000 3.000 4 TCGA:I 14771381 chr17 43065108 43066960 1853 + 0 GC AG 0 0 ,61270:1,65173:1 2 2 1.000 1.000 4 TCGA:I 14771382 chr17 43065108 43067095 1988 + 0 GC AG 0 0 ,62297:1 1 1 1.000 1.000 4 TCGA:I 14771383 chr17 43065108 43102632 37525 + 0 GC AG 0 0 ,69854:1 1 1 1.000 1.000 4 TCGA:I 14771384 chr17 43065108 43237423 172316 + 0 GC AG 0 0 ,59942:1,60072:1,60204:1,60510:1,60778:1,61526:1,61890:1,63007:1,63150:1,63356:1,63398:1,64686:2,65877:1,66139:1,66210:1,66218:2,66787:1,66989:2,67337:1,67999:1,68039:1,68368:1,68682:1,68945:1,69302:1,69478:1,69534:1,69617:1,69791:1,70970:1 30 33 1.100 1.000 4 TCGA:I 14771385 chr17 43065108 43525071 459964 + 0 GC AG 0 0 ,62643:1,63818:1,65507:1,66529:1 4 4 1.000 1.000 4 TCGA:I 14771386 chr17 43065108 43557733 492626 + 0 GC AG 0 0 ,65492:1 1 1 1.000 1.000 4 TCGA:I 14771387 chr17 43065110 43237425 172316 - 0 GC AG 0 0 ,59942:1,60072:1,60204:1,60510:1,60778:1,61526:1,61890:1,63007:1,63150:1,63356:1,63398:1,64686:2,65877:1,66139:1,66210:1,66218:2,66787:1,66989:2,67337:1,67999:1,68039:1,68368:1,68682:1,68945:1,69302:1,69478:1,69534:1,69617:1,69791:1,70970:1 30 33 1.100 1.000 4 TCGA:I 14771388 chr17 43065110 43509948 444839 - 0 GC AG 0 0 ,70937:1 1 1 1.000 1.000 4 TCGA:I 14771389 chr17 43065110 43557735 492626 - 0 GC AG 0 0 ,65492:1 1 1 1.000 1.000 4 TCGA:I 14771390 chr17 43065298 43199935 134638 - 0 GT AG 0 0 ,61431:1 1 1 1.000 1.000 4 TCGA:I 14771391 chr17 43065381 43067985 2605 + 0 AT AC 0 0 ,63818:1 1 1 1.000 1.000 4 TCGA:I 14771392 chr17 43065402 43066710 1309 - 0 GC AG 0 0 ,60571:1,60947:1,61096:1,62264:1,65040:1,66473:1,68896:1 7 7 1.000 1.000 4 TCGA:I 14771393 chr17 43065409 43067111 1703 - 0 GC AG 0 0 ,64368:1 1 1 1.000 1.000 4 TCGA:I 14771394 chr17 43065409 43067122 1714 - 0 GT AG 0 0 ,59761:1,59935:1,60456:1,60472:1,60483:1,60489:1,61007:1,61134:2,61187:1,61233:1,61275:2,61297:1,61360:1,61368:1,61416:1,61424:1,61459:1,61591:1,61639:2,61647:1,61761:2,61946:1,62039:1,62264:1,62297:1,62344:2,62413:2,62430:1,62469:1,62517:1,63009:1,63050:2,63331:1,63383:1,63440:1,63682:1,63738:1,63803:1,63818:2,63926:2,64036:2,64074:1,64135:1,64519:1,64525:1,64650:2,64878:1,64976:2,65016:1,65040:1,65537:1,65661:1,65748:1,65833:1,65862:1,65870:1,65897:2,65954:1,66069:2,66082:4,66113:2,66148:1,66166:1,66221:1,66270:1,66468:1,66505:1,66577:1,66589:1,66866:1,66921:1,66961:2,67091:1,67206:1,67526:1,67604:2,67791:1,67835:1,68025:1,68106:1,68114:1,68186:1,68340:1,68372:1,68411:1,68601:1,68676:1,68805:1,68910:2,69003:3,69160:2,69169:1,69376:1,69435:1,69462:1,69537:1,69713:1,69819:1,70048:1,70089:1,70124:1,70131:1,70153:1,70224:1,70336:1,70359:1,70593:1,70757:2,70921:1 109 134 1.229 1.000 4 TCGA:I 14771395 chr17 43065432 43065593 162 + 0 GC AG 0 0 ,66464:1 1 1 1.000 1.000 4 TCGA:I 14771396 chr17 43065432 43067150 1719 + 0 GC AG 0 0 ,64188:3,67497:1 2 4 2.000 2.000 4 TCGA:I 14771397 chr17 43065476 43066707 1232 - 0 GC AG 0 0 ,61204:1,61275:1,63866:1,64032:1,64046:4,64375:1,65571:1,67213:1,68490:1,68580:2,68810:2,69537:1,70164:1,70378:1 14 19 1.357 1.000 4 TCGA:I 14771398 chr17 43065476 43066795 1320 - 0 GC AG 0 0 ,64363:1 1 1 1.000 1.000 4 TCGA:I 14771399 chr17 43065562 43065593 32 + 0 GC AG 0 0 ,63011:1,66464:1,69585:1 3 3 1.000 1.000 4 TCGA:I 14771400 chr17 43065640 43218633 152994 - 0 GC AG 0 0 ,61144:1 1 1 1.000 1.000 4 TCGA:I 14771401 chr17 43065640 43219704 154065 - 0 GC AG 0 0 ,71000:1 1 1 1.000 1.000 4 TCGA:I 14771402 chr17 43065769 43066127 359 - 0 GT AG 0 0 ,64361:2 1 2 2.000 2.000 4 TCGA:I 14771403 chr17 43065917 43067607 1691 - 0 GT AG 0 aC19,cG19,cG38,gC19,gC38,kG19,kG38,mG19,mG38,rG19,rG38,sG19,sG38,vG19 ,62975:1,68491:1 2 2 1.000 1.000 4 TCGA:I 14771404 chr17 43065920 43067607 1688 - 0 GT AG 0 aC19,cG19,cG38,gC19,gC38,kG19,kG38,mG19,mG38,rG19,rG38,sG19,sG38,vG19 ,62869:1,63188:1,63661:1,64271:1,65995:1,67169:1 6 6 1.000 1.000 4 TCGA:I 14771405 chr17 43065920 43070862 4943 - 0 GT AG 0 0 ,68676:2 1 2 2.000 2.000 4 TCGA:I 14771406 chr17 43066160 43067607 1448 - 0 GT AG 0 aC19,cG19,cG38,gC19,gC38,kG19,kG38,mG19,mG38,rG19,rG38,sG19,sG38,vG19 ,63096:1 1 1 1.000 1.000 4 TCGA:I 14771407 chr17 43066169 43066187 19 - 0 AT AC 0 0 ,61464:1 1 1 1.000 1.000 4 TCGA:I 14771408 chr17 43066210 43074467 8258 + 0 GT AG 0 0 ,61039:1 1 1 1.000 1.000 4 TCGA:I 14771409 chr17 43066298 43146619 80322 + 0 AT AC 0 0 ,64131:1,67844:1,69617:2 3 4 1.333 1.000 4 TCGA:I 14771410 chr17 43066302 43146623 80322 - 0 AT AC 0 0 ,64131:1,67844:1,69617:2 3 4 1.333 1.000 4 TCGA:I 14771411 chr17 43066467 43066769 303 - 0 AT AC 0 0 ,63549:1 1 1 1.000 1.000 4 TCGA:I 14771412 chr17 43066493 43066710 218 - 0 GC AG 0 0 ,66778:2 1 2 2.000 2.000 4 TCGA:I 14771413 chr17 43066499 43066530 32 - 0 GC AG 0 0 ,69689:2 1 2 2.000 2.000 4 TCGA:I 14771414 chr17 43066531 43066710 180 - 0 GC AG 0 0 ,68249:1 1 1 1.000 1.000 4 TCGA:I 14771415 chr17 43066531 43067374 844 - 0 GC AG 0 0 ,64316:1 1 1 1.000 1.000 4 TCGA:I 14771416 chr17 43066531 43067508 978 - 0 GC AG 0 0 ,63007:1 1 1 1.000 1.000 4 TCGA:I 14771417 chr17 43066554 43067095 542 + 0 GT AG 0 0 ,67733:1 1 1 1.000 1.000 4 TCGA:I 14771418 chr17 43066603 43066734 132 + 0 GT AG 0 0 ,61836:2,67183:1 2 3 1.500 1.500 4 TCGA:I 14771419 chr17 43066622 43067028 407 + 0 GC AG 0 0 ,60447:1,61444:1,63797:1 3 3 1.000 1.000 4 TCGA:I 14771420 chr17 43066642 43067048 407 - 0 GT AG 0 0 ,60447:1,63797:1 2 2 1.000 1.000 4 TCGA:I 14771421 chr17 43066658 43067066 409 - 0 GC AG 0 0 ,67012:1 1 1 1.000 1.000 4 TCGA:I 14771422 chr17 43066658 43067368 711 - 0 GC AG 0 0 ,59958:1,60919:1,61061:1,61126:1,62181:1,63210:1 6 6 1.000 1.000 4 TCGA:I 14771423 chr17 43066663 43067373 711 + 0 GC AG 0 0 ,59958:1,60919:1,61061:1,61126:1,62181:1,63210:1 6 6 1.000 1.000 4 TCGA:I 14771424 chr17 43066664 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14771467 chr17 43067986 43068295 310 - 0 GT AG 0 0 ,59892:1,60799:1,70378:1 3 3 1.000 1.000 4 TCGA:I 14771468 chr17 43068018 43068151 134 - 0 GT AG 0 0 ,61314:1 1 1 1.000 1.000 4 TCGA:I 14771469 chr17 43068018 43068450 433 - 0 GC AG 0 0 ,63921:1 1 1 1.000 1.000 4 TCGA:I 14771470 chr17 43068018 43070231 2214 - 0 GC AG 0 0 ,66432:1 1 1 1.000 1.000 4 TCGA:I 14771471 chr17 43068047 43068479 433 + 0 GC AG 0 0 ,63241:1,63636:1,69422:1,69760:1,70457:1 5 5 1.000 1.000 4 TCGA:I 14771472 chr17 43068296 43554250 485955 - 0 GT AG 0 0 ,65414:1 1 1 1.000 1.000 4 TCGA:I 14771473 chr17 43068451 43070236 1786 - 0 GC AG 0 0 ,65946:1,68168:2 2 3 1.500 1.500 4 TCGA:I 14771474 chr17 43068480 43069135 656 + 0 GT AG 0 0 ,65808:1 1 1 1.000 1.000 4 TCGA:I 14771475 chr17 43068524 43493577 425054 - 0 GC AG 0 0 ,60393:1,60592:1,61605:1,61993:1,62374:1,63120:1,63223:1,64173:1,66034:1,66256:1,66965:1,68126:1,69671:1 13 13 1.000 1.000 4 TCGA:I 14771476 chr17 43068550 43070927 2378 - 0 GT AG 0 aC19,cG19,cG38,gC19,gC38,kG19,kG38,mG19,mG38,rG19,rG38,sG19,sG38,vG19 ,68089:1 1 1 1.000 1.000 4 TCGA:I 14771477 chr17 43069136 43210965 141830 + 0 GC AG 0 0 ,59784:1,59981:1,60024:1,60058:1,60072:1,60080:1,60099:1,60457:2,60535:1,60747:1,61001:1,61027:1,61119:2,61158:1,61166:2,61417:1,61542:1,61643:2,61717:1,61808:1,62136:1,62153:2,62261:2,62407:1,62629:2,62721:1,62774:3,62859:1,63114:1,63167:1,63272:1,63281:1,63353:2,63677:1,63735:1,63971:1,64051:1,64066:1,64195:1,64387:1,64794:1,64797:1,65647:3,65734:1,65830:1,65899:1,66024:1,66346:1,66387:1,66499:1,66872:2,67047:1,67074:1,67483:1,67573:2,67900:1,68145:1,68565:1,68582:1,68859:1,69010:3,69437:1,69577:1,69587:1,69590:1,69794:1,69815:1,69974:1,70035:1,70054:1,70548:1,70566:1,70753:1,70794:1,70933:3,70954:1,71069:1 77 95 1.234 1.000 4 TCGA:I 14771478 chr17 43069140 43210969 141830 + 0 GC AG 0 0 ,59784:1,59981:1,60024:1,60058:1,60072:1,60080:1,60099:1,60457:2,60535:1,60747:1,61001:1,61027:1,61119:2,61158:1,61166:2,61417:1,61542:1,61643:2,61717:1,61808:1,62136:1,62153:2,62261:2,62407:1,62629:2,62721:1,62774:3,62859:1,63114:1,63167:1,63272:1,63281:1,63353:2,63677:1,63735:1,63971:1,64051:1,64066:1,64195:1,64387:1,64794:1,64797:1,65647:3,65734:1,65830:1,65899:1,66024:1,66346:1,66387:1,66499:1,66872:2,67047:1,67074:1,67483:1,67573:2,67900:1,68145:1,68565:1,68582:1,68859:1,69010:3,69437:1,69577:1,69587:1,69590:1,69794:1,69815:1,69974:1,70035:1,70054:1,70548:1,70566:1,70753:1,70794:1,70933:3,70954:1,71069:1 77 95 1.234 1.000 4 TCGA:I 14771479 chr17 43069389 43092536 23148 + 0 GC AG 0 0 ,69169:1 1 1 1.000 1.000 4 TCGA:I 14771480 chr17 43069450 43091696 22247 - 0 GC AG 0 0 ,68822:1 1 1 1.000 1.000 4 TCGA:I 14771481 chr17 43069564 43069576 13 + 0 GC AG 0 0 ,60678:1 1 1 1.000 1.000 4 TCGA:I 14771482 chr17 43069597 43071046 1450 + 0 GT AG 0 0 ,59857:1,59870:1,59947:1,59979:4,60278:1,60509:1,60634:1,60672:1,60723:2,60742:2,60776:2,60919:1,60928:1,61063:2,61072:1,61129:1,61145:2,61446:1,61528:1,61766:2,62068:1,62117:1,62165:2,62182:1,62278:1,62350:1,62402:1,62453:1,62568:1,62610:1,62885:1,62939:1,62941:1,63054:1,63271:1,63281:1,63330:1,63852:3,63988:1,63999:1,64040:2,64066:1,64091:1,64205:1,64275:2,64730:2,64886:1,65140:1,65183:1,65189:1,65226:1,65378:1,65411:1,65602:1,65627:1,65660:1,65872:1,66077:1,66228:1,66229:1,66329:1,66373:2,66447:2,66501:1,66659:1,66674:2,66835:1,66880:3,66912:1,66929:1,66945:1,66992:9,67083:1,67122:1,67348:3,67502:1,67534:1,67541:1,67625:3,67660:1,67752:1,67931:2,67957:1,67992:1,68054:1,68094:1,68149:1,68343:1,68389:2,68403:1,68585:1,68791:1,68802:1,68960:1,69006:1,69017:1,69053:1,69168:1,69212:1,69230:2,69304:1,69332:1,69473:1,69732:1,69954:1,70040:2,70245:1,70283:3,70321:1,70346:1,70371:1,70417:1,70467:1,70468:1,70605:1,70831:3,71021:1,71072:1,71078:4,71087:1 120 163 1.358 1.000 4 TCGA:I 14771483 chr17 43069597 43071049 1453 + 0 GT AG 0 0 ,59979:1,60134:1,60547:1,60672:1,61195:2,61289:1,61331:1,61446:1,61458:1,61549:1,61631:2,61855:1,62008:1,62116:1,63008:1,63981:2,63999:1,64471:1,64527:1,64851:1,65128:1,65183:1,65411:1,65647:1,65734:1,65823:1,65874:1,66447:2,66506:1,66774:1,66826:1,66892:1,66992:1,67014:1,67221:1,67294:1,67348:1,67505:1,67571:1,68146:1,68230:1,68342:1,68791:1,68932:1,68955:1,69004:1,69078:1,69317:1,69339:1,69611:1,70022:1,70212:1,70321:1,70346:1,70356:1,70383:1,70467:1,70605:1,70831:1 59 63 1.068 1.000 4 TCGA:I 14771484 chr17 43069597 43071121 1525 + 0 GT AG 0 0 ,62130:1 1 1 1.000 1.000 4 TCGA:I 14771485 chr17 43069979 43070143 165 + 0 GC AG 0 0 ,66464:1,70887:1 2 2 1.000 1.000 4 TCGA:I 14771486 chr17 43069979 43072927 2949 + 0 GC AG 0 0 ,59994:1,60472:2 2 3 1.500 1.500 4 TCGA:I 14771487 chr17 43069979 43075607 5629 + 0 GC AG 0 0 ,60845:2 1 2 2.000 2.000 4 TCGA:I 14771488 chr17 43069993 43076064 6072 + 0 GT AG 0 0 ,60845:2 1 2 2.000 2.000 4 TCGA:I 14771489 chr17 43070211 43552097 481887 + 0 GC AG 0 0 ,61436:1 1 1 1.000 1.000 4 TCGA:I 14771490 chr17 43070599 43525552 454954 + 0 GC AG 0 0 ,61151:1 1 1 1.000 1.000 4 TCGA:I 14771491 chr17 43070601 43525554 454954 - 0 GC AG 0 0 ,61151:1 1 1 1.000 1.000 4 TCGA:I 14771492 chr17 43070965 43071022 58 + 0 AT AC 0 0 ,67081:1 1 1 1.000 1.000 4 TCGA:I 14771493 chr17 43070973 43071206 234 + 0 GT AG 0 0 ,60284:1 1 1 1.000 1.000 4 TCGA:I 14771494 chr17 43070986 43071123 138 + 0 GT AG 0 0 ,66376:1,69793:1 2 2 1.000 1.000 4 TCGA:I 14771495 chr17 43070986 43071279 294 - 0 AT AC 0 0 ,69634:1 1 1 1.000 1.000 4 TCGA:I 14771496 chr17 43070995 43071340 346 + 0 GT AG 0 0 ,71015:1 1 1 1.000 1.000 4 TCGA:I 14771497 chr17 43070995 43552479 481485 + 0 GT AG 0 0 ,61561:1,62977:1,65594:1 3 3 1.000 1.000 4 TCGA:I 14771498 chr17 43071006 43071022 17 - 0 GT AG 0 0 ,61596:2 1 2 2.000 2.000 4 TCGA:I 14771499 chr17 43071006 43071092 87 - 0 GC AG 0 0 ,64303:1 1 1 1.000 1.000 4 TCGA:I 14771500 chr17 43071031 43074471 3441 + 0 AT AC 0 0 ,68530:1 1 1 1.000 1.000 4 TCGA:I 14771501 chr17 43071076 43071156 81 - 0 GT AG 0 0 ,66112:1 1 1 1.000 1.000 4 TCGA:I 14771502 chr17 43071076 43076575 5500 - 0 GC AG 0 0 ,70450:1 1 1 1.000 1.000 4 TCGA:I 14771503 chr17 43071101 43071156 56 + 0 AT AC 0 0 ,70036:1 1 1 1.000 1.000 4 TCGA:I 14771504 chr17 43071118 43071175 58 + 0 GC AG 0 0 ,62942:1 1 1 1.000 1.000 4 TCGA:I 14771505 chr17 43071124 43082551 11428 + 0 GT AG 0 0 ,60571:1 1 1 1.000 1.000 4 TCGA:I 14771506 chr17 43071138 43074356 3219 - 0 AT AC 0 0 ,64564:1 1 1 1.000 1.000 4 TCGA:I 14771507 chr17 43071138 43074443 3306 + 0 GT AG 0 0 ,69167:1 1 1 1.000 1.000 4 TCGA:I 14771508 chr17 43071138 43094818 23681 - 0 AT AC 0 0 ,68286:1 1 1 1.000 1.000 4 TCGA:I 14771509 chr17 43071170 43074330 3161 - 0 GT AG 0 aC19,cG19,cG38,gC19,gC38,kG19,kG38,mG19,mG38,rG19,rG38,sG19,sG38,vG19 ,66233:1 1 1 1.000 1.000 4 TCGA:I 14771510 chr17 43071170 43079333 8164 - 0 GT AG 0 aC19,cG19,cG38,gC19,gC38,kG19,kG38,mG19,mG38,rG19,rG38,sG19,sG38,vG19 ,65859:1 1 1 1.000 1.000 4 TCGA:I 14771511 chr17 43071170 43533913 462744 - 0 GC AG 0 0 ,67531:1 1 1 1.000 1.000 4 TCGA:I 14771512 chr17 43071207 43071937 731 + 0 GC AG 0 0 ,65401:1 1 1 1.000 1.000 4 TCGA:I 14771513 chr17 43071208 43091575 20368 - 0 GT AG 0 0 ,69964:1 1 1 1.000 1.000 4 TCGA:I 14771514 chr17 43071225 43073037 1813 + 0 GT AG 0 0 ,68657:1,70605:1 2 2 1.000 1.000 4 TCGA:I 14771515 chr17 43071225 43074334 3110 + 0 GT AG 0 0 ,69902:3 1 3 3.000 3.000 4 TCGA:I 14771516 chr17 43071225 43074369 3145 - 0 AT AC 0 0 ,64244:1 1 1 1.000 1.000 4 TCGA:I 14771517 chr17 43071225 43082437 11213 + 0 GT AG 0 0 ,59849:1,60004:1,60364:1,60644:1,60723:1,60742:1,61072:2,61145:1,61289:1,61348:1,61446:3,61770:1,62234:1,63848:2,63852:1,63897:1,64040:1,64212:1,64275:1,64366:1,64405:1,64554:1,64670:1,65186:1,65192:2,65243:1,65411:6,65615:1,66273:1,66447:1,66929:1,66992:3,67182:1,67200:1,67348:2,67570:1,67600:1,67625:2,68132:1,68146:1,68179:1,68230:1,68389:2,68403:1,68564:1,68604:1,68657:1,68732:1,68932:1,69158:1,69168:1,69473:1,70017:3,70321:2,70343:1,70383:3,70539:2,70584:1,70871:1,71054:2 60 82 1.367 1.000 4 TCGA:I 14771518 chr17 43071225 43087759 16535 + 0 GT AG 0 0 ,65631:2 1 2 2.000 2.000 4 TCGA:I 14771519 chr17 43071225 43087916 16692 + 0 GT AG 0 0 ,61195:1,64040:1,64506:1,67541:2,68455:1,68543:1,69053:1 7 8 1.143 1.000 4 TCGA:I 14771520 chr17 43071225 43091116 19892 + 0 GT AG 0 0 ,61631:2,63054:1 2 3 1.500 1.500 4 TCGA:I 14771521 chr17 43071225 43092379 21155 + 0 GT AG 0 0 ,69671:1 1 1 1.000 1.000 4 TCGA:I 14771522 chr17 43071225 43099290 28066 + 0 GT AG 0 0 ,62405:1 1 1 1.000 1.000 4 TCGA:I 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aC19,cG19,cG38,gC19,gC38,kG19,kG38,mG19,mG38,rG19,rG38,sG19,sG38,vG19 aC19,cG19,cG38,gC19,gC38,kG19,kG38,mG19,mG38,rG19,rG38,sG19,sG38,vG19 ,66061:1 1 1 1.000 1.000 4 TCGA:I 14771543 chr17 43071303 43074330 3028 - 0 GT AG 0 aC19,cG19,cG38,gC19,gC38,kG19,kG38,mG19,mG38,rG19,rG38,sG19,sG38,vG19 ,60808:1 1 1 1.000 1.000 4 TCGA:I 14771544 chr17 43071744 43073071 1328 - 0 GT AG 0 0 ,65173:1 1 1 1.000 1.000 4 TCGA:I 14771545 chr17 43071744 43198394 126651 - 0 GC AG 0 0 ,64352:1 1 1 1.000 1.000 4 TCGA:I 14771546 chr17 43071767 43071905 139 + 0 GC AG 0 0 ,63376:1 1 1 1.000 1.000 4 TCGA:I 14771547 chr17 43071906 43072286 381 + 0 GC AG 0 0 ,60559:1,61704:1,63293:1,64099:1,65039:1,65503:1,66400:1,70366:1 8 8 1.000 1.000 4 TCGA:I 14771548 chr17 43071906 43370539 298634 + 0 GC AG 0 0 ,64092:1,70890:1 2 2 1.000 1.000 4 TCGA:I 14771549 chr17 43071906 43388136 316231 + 0 GC AG 0 0 ,67393:1,70628:2 2 3 1.500 1.500 4 TCGA:I 14771550 chr17 43071906 43568411 496506 + 0 GC AG 0 0 ,61374:1 1 1 1.000 1.000 4 TCGA:I 14771551 chr17 43071912 43072156 245 + 0 GC AG 0 0 ,63365:1 1 1 1.000 1.000 4 TCGA:I 14771552 chr17 43071912 43370545 298634 + 0 GC AG 0 0 ,64092:1,70890:1 2 2 1.000 1.000 4 TCGA:I 14771553 chr17 43071912 43568417 496506 + 0 GC AG 0 0 ,61374:1 1 1 1.000 1.000 4 TCGA:I 14771554 chr17 43071938 43072318 381 + 0 GC AG 0 0 ,63715:2 1 2 2.000 2.000 4 TCGA:I 14771555 chr17 43071981 43380821 308841 - 0 GC AG 0 0 ,67155:1 1 1 1.000 1.000 4 TCGA:I 14771556 chr17 43071981 43414172 342192 - 0 GC AG 0 0 ,67350:1,68976:1 2 2 1.000 1.000 4 TCGA:I 14771557 chr17 43072128 43074055 1928 - 0 GC AG 0 0 ,60472:1 1 1 1.000 1.000 4 TCGA:I 14771558 chr17 43072157 43073123 967 + 0 GT AG 0 0 ,69534:2 1 2 2.000 2.000 4 TCGA:I 14771559 chr17 43072183 43117236 45054 + 0 GT AG 0 0 ,68022:1 1 1 1.000 1.000 4 TCGA:I 14771560 chr17 43072183 43137981 65799 + 0 GT AG 0 0 ,65116:1 1 1 1.000 1.000 4 TCGA:I 14771561 chr17 43072183 43307934 235752 + 0 GT AG 0 0 ,62894:1 1 1 1.000 1.000 4 TCGA:I 14771562 chr17 43072447 43131828 59382 + 0 GC AG 0 0 ,62744:1,63105:1 2 2 1.000 1.000 4 TCGA:I 14771563 chr17 43072485 43087968 15484 - 0 GC AG 0 0 ,65005:1 1 1 1.000 1.000 4 TCGA:I 14771564 chr17 43072491 43087974 15484 - 0 GT AG 0 0 ,65005:1 1 1 1.000 1.000 4 TCGA:I 14771565 chr17 43072546 43525747 453202 + 0 GT AG 0 0 ,68326:1 1 1 1.000 1.000 4 TCGA:I 14771566 chr17 43072610 43072927 318 + 0 GC AG 0 0 ,67109:1 1 1 1.000 1.000 4 TCGA:I 14771567 chr17 43072795 43191952 119158 - 0 GT AG 0 0 ,66850:1 1 1 1.000 1.000 4 TCGA:I 14771568 chr17 43072795 43406596 333802 - 0 GT AG 0 0 ,60234:1,67113:1,67943:1 3 3 1.000 1.000 4 TCGA:I 14771569 chr17 43072800 43406601 333802 + 0 GT AG 0 0 ,60234:1,67113:1,67943:1 3 3 1.000 1.000 4 TCGA:I 14771570 chr17 43072813 43102603 29791 - 0 GC AG 0 0 ,63332:1 1 1 1.000 1.000 4 TCGA:I 14771571 chr17 43072813 43120815 48003 - 0 GC AG 0 0 ,66613:2 1 2 2.000 2.000 4 TCGA:I 14771572 chr17 43072813 43314308 241496 - 0 GC AG 0 0 ,61023:1 1 1 1.000 1.000 4 TCGA:I 14771573 chr17 43072813 43473102 400290 - 0 GC AG 0 0 ,64643:1 1 1 1.000 1.000 4 TCGA:I 14771574 chr17 43072813 43502674 429862 - 0 GT AG 0 0 ,59998:1 1 1 1.000 1.000 4 TCGA:I 14771575 chr17 43072819 43072971 153 - 0 GC AG 0 0 ,61707:1,62869:1 2 2 1.000 1.000 4 TCGA:I 14771576 chr17 43072819 43199329 126511 - 0 GC AG 0 0 ,62290:1 1 1 1.000 1.000 4 TCGA:I 14771577 chr17 43072819 43510302 437484 - 0 GC AG 0 0 ,65823:1 1 1 1.000 1.000 4 TCGA:I 14771578 chr17 43072928 43408946 336019 + 0 GC AG 0 0 ,68480:2 1 2 2.000 2.000 4 TCGA:I 14771579 chr17 43072948 43477348 404401 - 0 GC AG 0 0 ,60148:1,60194:1,61573:1,68048:1,70757:1 5 5 1.000 1.000 4 TCGA:I 14771580 chr17 43072980 43073100 121 + 0 GT AG 0 0 ,67806:1 1 1 1.000 1.000 4 TCGA:I 14771581 chr17 43073040 43073265 226 - 0 AT AC 0 0 ,70872:2 1 2 2.000 2.000 4 TCGA:I 14771582 chr17 43073040 43222353 149314 + 0 GT AG 0 0 ,64764:1,65677:1,67811:1 3 3 1.000 1.000 4 TCGA:I 14771583 chr17 43073064 43193507 120444 + 0 GC AG 0 0 ,68646:1 1 1 1.000 1.000 4 TCGA:I 14771584 chr17 43073064 43193569 120506 + 0 GC AG 0 0 ,61636:1 1 1 1.000 1.000 4 TCGA:I 14771585 chr17 43073139 43189075 115937 - 0 GC AG 0 0 ,63785:1 1 1 1.000 1.000 4 TCGA:I 14771586 chr17 43073148 43151395 78248 + 0 AT AC 0 0 ,65263:1 1 1 1.000 1.000 4 TCGA:I 14771587 chr17 43073184 43074023 840 - 0 GT AG 0 0 ,61436:1 1 1 1.000 1.000 4 TCGA:I 14771588 chr17 43073481 43489485 416005 + 0 AT AC 0 0 ,60184:1 1 1 1.000 1.000 4 TCGA:I 14771589 chr17 43073843 43074406 564 - 0 GT AG 0 0 ,63383:1 1 1 1.000 1.000 4 TCGA:I 14771590 chr17 43074304 43074478 175 - 0 AT AC 0 0 ,64475:1 1 1 1.000 1.000 4 TCGA:I 14771591 chr17 43074373 43074478 106 - 0 AT AC 0 0 ,68336:1 1 1 1.000 1.000 4 TCGA:I 14771592 chr17 43074392 43076495 2104 - 0 GT AG 0 0 ,61487:2,63943:1 2 3 1.500 1.500 4 TCGA:I 14771593 chr17 43074394 43074478 85 - 0 AT AC 0 0 ,62892:1,66616:1 2 2 1.000 1.000 4 TCGA:I 14771594 chr17 43074416 43074471 56 - 0 GT AG 0 0 ,61659:1 1 1 1.000 1.000 4 TCGA:I 14771595 chr17 43074473 43082414 7942 - 0 AT AC 0 0 ,66023:1 1 1 1.000 1.000 4 TCGA:I 14771596 chr17 43074475 43075058 584 + 0 GC AG 0 0 ,62436:1 1 1 1.000 1.000 4 TCGA:I 14771597 chr17 43074486 43076487 2002 - 0 GT AG 0 aC19,cG19,cG38,gC19,gC38,kG19,kG38,mG19,mG38,rG19,rG38,sG19,sG38,vG19 ,64872:1 1 1 1.000 1.000 4 TCGA:I 14771598 chr17 43074493 43076487 1995 - 0 GT AG 0 aC19,cG19,cG38,gC19,gC38,kG19,kG38,mG19,mG38,rG19,rG38,sG19,sG38,vG19 ,63053:1,65770:1,67286:1 3 3 1.000 1.000 4 TCGA:I 14771599 chr17 43074493 43079333 4841 - 0 GT AG 0 aC19,cG19,cG38,gC19,gC38,kG19,kG38,mG19,mG38,rG19,rG38,sG19,sG38,vG19 ,69684:1 1 1 1.000 1.000 4 TCGA:I 14771600 chr17 43074493 43082403 7911 - 0 GT AG 0 aC19,cG19,cG38,gC19,gC38,kG19,kG38,mG19,mG38,rG19,rG38,sG19,sG38,vG19 ,60101:1,61933:1,65323:1,65357:1,67361:1,69237:1,70441:1 7 7 1.000 1.000 4 TCGA:I 14771601 chr17 43074503 43091724 17222 + 0 GC AG 0 0 ,67090:1 1 1 1.000 1.000 4 TCGA:I 14771602 chr17 43074522 43074843 322 - 0 GT AG aC19,cG19,cG38,gC19,gC38,kG19,kG38,mG19,mG38,rG19,rG38,sG19,sG38,vG19 0 ,67153:1 1 1 1.000 1.000 4 TCGA:I 14771603 chr17 43074522 43076487 1966 - 1 GT AG aC19,cG19,cG38,gC19,gC38,kG19,kG38,mG19,mG38,rG19,rG38,sG19,sG38,vG19 aC19,cG19,cG38,gC19,gC38,kG19,kG38,mG19,mG38,rG19,rG38,sG19,sG38,vG19 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373 459 1.231 1.000 4 TCGA:I 14771606 chr17 43074522 43090943 16422 - 0 GT AG aC19,cG19,cG38,gC19,gC38,kG19,kG38,mG19,mG38,rG19,rG38,sG19,sG38,vG19 aC19,cG19,cG38,gC19,gC38,kG19,kG38,mG19,mG38,rG19,rG38,sG19,sG38,vG19 ,61240:1,61257:1,61367:1,62284:1,62486:1,62512:2,62606:1,62608:1,62803:1,63157:1,63238:1,63310:1,64051:2,64244:1,64633:1,65040:1,66067:1,67655:1,68000:1,68247:1,68724:1,68820:1,69620:1,69672:2,69875:1,69960:1,70056:2,70621:1 28 32 1.143 1.000 4 TCGA:I 14771607 chr17 43074522 43099774 25253 - 0 GT AG aC19,cG19,cG38,gC19,gC38,kG19,kG38,mG19,mG38,rG19,rG38,sG19,sG38,vG19 aC19,cG19,cG38,gC19,gC38,kG19,kG38,mG19,mG38,rG19,rG38,sG19,sG38,vG19 ,66076:1,70310:1,70489:1 3 3 1.000 1.000 4 TCGA:I 14771608 chr17 43074522 43124016 49495 - 0 GT AG aC19,cG19,cG38,gC19,gC38,kG19,kG38,mG19,mG38,rG19,rG38,sG19,sG38,vG19 aC19,cG19,cG38,gC19,gC38,kG19,kG38,mG19,mG38,rG19,rG38,sG19,sG38,vG19 ,67520:7 1 7 7.000 7.000 4 TCGA:I 14771609 chr17 43074522 43125270 50749 - 1 GT AG aC19,cG19,cG38,gC19,gC38,kG19,kG38,mG19,mG38,rG19,rG38,sG19,sG38,vG19 aC19,gC19,gC38,kG19,kG38,mG19,mG38,rG19,rG38,sG19,vG19 ,65692:1,65795:3,69112:1,69902:1,70863:1,70956:1 6 8 1.333 1.000 4 TCGA:I 14771610 chr17 43074522 43170125 95604 - 0 GT AG aC19,cG19,cG38,gC19,gC38,kG19,kG38,mG19,mG38,rG19,rG38,sG19,sG38,vG19 aC19,gC19,gC38,kG19,kG38,rG19,rG38,sG19,sG38 ,68966:1 1 1 1.000 1.000 4 TCGA:I 14771611 chr17 43074534 43076487 1954 + 0 AT AC 0 aC19,cG19,cG38,gC19,gC38,kG19,kG38,mG19,mG38,rG19,rG38,sG19,sG38,vG19 ,71015:1 1 1 1.000 1.000 4 TCGA:I 14771612 chr17 43074688 43081644 6957 - 0 GC AG 0 0 ,67063:1 1 1 1.000 1.000 4 TCGA:I 14771613 chr17 43074738 43079329 4592 + 0 GC AG 0 0 ,65320:1 1 1 1.000 1.000 4 TCGA:I 14771614 chr17 43074768 43075119 352 + 0 GT AG 0 0 ,59775:1,65429:1 2 2 1.000 1.000 4 TCGA:I 14771615 chr17 43074789 43075721 933 - 0 GC AG 0 0 ,60531:2,60833:1,61039:1,61982:1,66866:1,66989:1 6 7 1.167 1.000 4 TCGA:I 14771616 chr17 43074796 43075963 1168 - 0 GC AG 0 0 ,62193:1,63866:1 2 2 1.000 1.000 4 TCGA:I 14771617 chr17 43074819 43076003 1185 + 0 GC AG 0 0 ,61368:1 1 1 1.000 1.000 4 TCGA:I 14771618 chr17 43074825 43075705 881 + 0 GC AG 0 0 ,60498:1,64878:1 2 2 1.000 1.000 4 TCGA:I 14771619 chr17 43074857 43078111 3255 + 0 GT AG 0 0 ,68565:2 1 2 2.000 2.000 4 TCGA:I 14771620 chr17 43074894 43307101 232208 - 0 GT AG 0 0 ,70478:1 1 1 1.000 1.000 4 TCGA:I 14771621 chr17 43075120 43075657 538 + 0 GT AG 0 0 ,62458:1 1 1 1.000 1.000 4 TCGA:I 14771622 chr17 43075511 43075910 400 + 0 GC AG 0 0 ,67161:1 1 1 1.000 1.000 4 TCGA:I 14771623 chr17 43075576 43075836 261 - 0 AT AC 0 0 ,63050:1 1 1 1.000 1.000 4 TCGA:I 14771624 chr17 43075622 43076064 443 + 0 GC AG 0 0 ,60845:2,61729:1,69435:1 3 4 1.333 1.000 4 TCGA:I 14771625 chr17 43075633 43236918 161286 + 0 GC AG 0 0 ,60026:1 1 1 1.000 1.000 4 TCGA:I 14771626 chr17 43075634 43076049 416 - 0 GC AG 0 0 ,66574:2,67261:1,67423:3 3 6 2.000 2.000 4 TCGA:I 14771627 chr17 43075651 43075898 248 - 0 GC AG 0 0 ,66215:1 1 1 1.000 1.000 4 TCGA:I 14771628 chr17 43075733 43082437 6705 + 0 GT AG 0 0 ,64091:1 1 1 1.000 1.000 4 TCGA:I 14771629 chr17 43075899 43078661 2763 - 0 GC AG 0 0 ,63485:1 1 1 1.000 1.000 4 TCGA:I 14771630 chr17 43075899 43079146 3248 - 0 GC AG 0 0 ,59839:2 1 2 2.000 2.000 4 TCGA:I 14771631 chr17 43075991 43102216 26226 + 0 GC AG 0 0 ,62931:1 1 1 1.000 1.000 4 TCGA:I 14771632 chr17 43076252 43076560 309 - 0 GC AG 0 0 ,64458:1 1 1 1.000 1.000 4 TCGA:I 14771633 chr17 43076508 43076535 28 + 0 AT AC 0 0 ,63709:1 1 1 1.000 1.000 4 TCGA:I 14771634 chr17 43076528 43076544 17 - 0 GT AG 0 0 ,69300:1 1 1 1.000 1.000 4 TCGA:I 14771635 chr17 43076538 43076866 329 - 0 GT AG 0 0 ,69989:1 1 1 1.000 1.000 4 TCGA:I 14771636 chr17 43076561 43092300 15740 - 0 GC AG 0 0 ,63757:1 1 1 1.000 1.000 4 TCGA:I 14771637 chr17 43076561 43094126 17566 - 0 GC AG 0 0 ,60158:1 1 1 1.000 1.000 4 TCGA:I 14771638 chr17 43076593 43082403 5811 - 0 GT AG 0 aC19,cG19,cG38,gC19,gC38,kG19,kG38,mG19,mG38,rG19,rG38,sG19,sG38,vG19 ,70450:1 1 1 1.000 1.000 4 TCGA:I 14771639 chr17 43076598 43082403 5806 - 0 GT AG 0 aC19,cG19,cG38,gC19,gC38,kG19,kG38,mG19,mG38,rG19,rG38,sG19,sG38,vG19 ,63536:1,68700:1 2 2 1.000 1.000 4 TCGA:I 14771640 chr17 43076609 43082399 5791 + 0 AT AC 0 0 ,59827:1,68530:1 2 2 1.000 1.000 4 TCGA:I 14771641 chr17 43076612 43077003 392 - 0 GT AG aC19,cG19,cG38,gC19,gC38,kG19,kG38,mG19,mG38,rG19,rG38,sG19,vG19 0 ,60020:3,60925:1,60959:1,62342:1,66002:1,67389:1,69475:1 7 9 1.286 1.000 4 TCGA:I 14771642 chr17 43076612 43077020 409 - 0 GT AG aC19,cG19,cG38,gC19,gC38,kG19,kG38,mG19,mG38,rG19,rG38,sG19,vG19 0 ,65530:1 1 1 1.000 1.000 4 TCGA:I 14771643 chr17 43076612 43079333 2722 - 1 GT AG aC19,cG19,cG38,gC19,gC38,kG19,kG38,mG19,mG38,rG19,rG38,sG19,vG19 aC19,cG19,cG38,gC19,gC38,kG19,kG38,mG19,mG38,rG19,rG38,sG19,sG38,vG19 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401 - 0 GT AG 0 0 ,67742:1 1 1 1.000 1.000 4 TCGA:I 14771670 chr17 43077565 43078315 751 - 0 GT AG 0 0 ,69806:1 1 1 1.000 1.000 4 TCGA:I 14771671 chr17 43077614 43130593 52980 + 0 AT AC 0 0 ,68359:1,69930:1 2 2 1.000 1.000 4 TCGA:I 14771672 chr17 43077614 43173564 95951 + 0 AT AC 0 0 ,66103:1 1 1 1.000 1.000 4 TCGA:I 14771673 chr17 43077614 43553441 475828 + 0 AT AC 0 0 ,70174:1 1 1 1.000 1.000 4 TCGA:I 14771674 chr17 43077739 43078088 350 + 0 AT AC 0 0 ,60645:1,68703:4 2 5 2.500 2.500 4 TCGA:I 14771675 chr17 43077779 43078129 351 + 0 GC AG 0 0 ,60777:1,64252:1,64382:1,68201:1,69072:1 5 5 1.000 1.000 4 TCGA:I 14771676 chr17 43077846 43080725 2880 - 0 GC AG 0 0 ,67782:1 1 1 1.000 1.000 4 TCGA:I 14771677 chr17 43077856 43078203 348 - 0 GC AG 0 0 ,68601:1 1 1 1.000 1.000 4 TCGA:I 14771678 chr17 43077856 43078339 484 - 0 GC AG 0 0 ,70104:1 1 1 1.000 1.000 4 TCGA:I 14771679 chr17 43077879 43078226 348 + 0 GT AG 0 0 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98900 + 0 GT AG 0 0 ,64076:2 1 2 2.000 2.000 4 TCGA:I 14771772 chr17 43083977 43084866 890 + 0 GC AG 0 0 ,65404:1 1 1 1.000 1.000 4 TCGA:I 14771773 chr17 43083979 43084868 890 - 0 GC AG 0 0 ,65404:1 1 1 1.000 1.000 4 TCGA:I 14771774 chr17 43084028 43084328 301 - 0 GC AG 0 0 ,68583:1,68879:1 2 2 1.000 1.000 4 TCGA:I 14771775 chr17 43084151 43132883 48733 - 0 GC AG 0 0 ,69405:1 1 1 1.000 1.000 4 TCGA:I 14771776 chr17 43084266 43515422 431157 + 0 AT AC 0 0 ,64076:1,66973:1,69521:1 3 3 1.000 1.000 4 TCGA:I 14771777 chr17 43084285 43084420 136 - 0 GC AG 0 0 ,70588:1 1 1 1.000 1.000 4 TCGA:I 14771778 chr17 43084285 43090629 6345 - 0 GC AG 0 0 ,65310:1 1 1 1.000 1.000 4 TCGA:I 14771779 chr17 43085259 43230878 145620 + 0 GC AG 0 0 ,60505:1 1 1 1.000 1.000 4 TCGA:I 14771780 chr17 43085265 43098945 13681 + 0 GC AG 0 0 ,60515:1 1 1 1.000 1.000 4 TCGA:I 14771781 chr17 43085265 43230884 145620 + 0 GC AG 0 0 ,60505:1 1 1 1.000 1.000 4 TCGA:I 14771782 chr17 43085772 43086519 748 + 0 GC AG 0 0 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43517166 429185 + 0 GC AG 0 aC19,cG19,cG38,gC19,gC38,kG19,kG38,mG19,mG38,rG19,rG38,sG19,sG38 ,70239:1 1 1 1.000 1.000 4 TCGA:I 14771793 chr17 43087988 43517172 429185 + 0 GC AG 0 0 ,70239:1 1 1 1.000 1.000 4 TCGA:I 14771794 chr17 43088001 43223306 135306 - 0 GC AG 0 0 ,68984:1 1 1 1.000 1.000 4 TCGA:I 14771795 chr17 43089120 43089347 228 - 0 GC AG 0 0 ,63937:1 1 1 1.000 1.000 4 TCGA:I 14771796 chr17 43089129 43100142 11014 + 0 AT AC 0 0 ,63007:1 1 1 1.000 1.000 4 TCGA:I 14771797 chr17 43089584 43089832 249 - 0 AT AC 0 0 ,65598:2,65772:1 2 3 1.500 1.500 4 TCGA:I 14771798 chr17 43089593 43090418 826 + 0 GC AG 0 0 ,61263:1,68932:1 2 2 1.000 1.000 4 TCGA:I 14771799 chr17 43089643 43090468 826 + 0 GT AG 0 0 ,65203:1 1 1 1.000 1.000 4 TCGA:I 14771800 chr17 43089750 43090623 874 - 0 GT AG 0 0 ,60295:1 1 1 1.000 1.000 4 TCGA:I 14771801 chr17 43089750 43367371 277622 - 0 GC AG 0 0 ,65201:1 1 1 1.000 1.000 4 TCGA:I 14771802 chr17 43089773 43090585 813 + 0 GC AG 0 0 ,60414:1 1 1 1.000 1.000 4 TCGA:I 14771803 chr17 43090002 43090943 942 - 0 GT AG 0 aC19,cG19,cG38,gC19,gC38,kG19,kG38,mG19,mG38,rG19,rG38,sG19,sG38,vG19 ,64038:1,66449:2,67689:1,70351:1 4 5 1.250 1.000 4 TCGA:I 14771804 chr17 43090204 43217270 127067 - 0 GT AG 0 0 ,62635:1,65478:1,68957:1 3 3 1.000 1.000 4 TCGA:I 14771805 chr17 43090302 43125081 34780 - 0 AT AC 0 0 ,60192:1 1 1 1.000 1.000 4 TCGA:I 14771806 chr17 43090354 43090943 590 - 0 GT AG 0 aC19,cG19,cG38,gC19,gC38,kG19,kG38,mG19,mG38,rG19,rG38,sG19,sG38,vG19 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chr17 43091033 43097243 6211 - 0 GT AG aC19,cG19,cG38,gC19,gC38,kG19,kG38,mG19,mG38,rG19,rG38,sG19,sG38,vG19 aC19,cG19,cG38,gC19,gC38,kG19,kG38,mG19,mG38,rG19,rG38,sG19,sG38,vG19 ,59846:1,60119:1,61457:1,61652:3,62848:1,64075:1,67256:1,70220:1 8 10 1.250 1.000 4 TCGA:I 14771831 chr17 43091033 43099774 8742 - 1 GT AG aC19,cG19,cG38,gC19,gC38,kG19,kG38,mG19,mG38,rG19,rG38,sG19,sG38,vG19 aC19,cG19,cG38,gC19,gC38,kG19,kG38,mG19,mG38,rG19,rG38,sG19,sG38,vG19 ,59776:1,59845:2,60322:1,60574:1,60698:1,60983:2,61404:1,61652:1,61797:1,61917:1,62536:1,63137:1,63380:1,63401:1,63629:1,63671:2,63895:1,63935:1,64294:2,64645:1,65024:1,65264:1,65986:1,66866:2,66912:1,67367:2,68289:1,68491:1,68517:1,68698:1,69081:1,69433:1,69776:1,69964:1,70470:1,70569:1,70613:1,71061:1 38 44 1.158 1.000 4 TCGA:I 14771832 chr17 43091033 43104121 13089 - 0 GT AG aC19,cG19,cG38,gC19,gC38,kG19,kG38,mG19,mG38,rG19,rG38,sG19,sG38,vG19 aC19,cG19,cG38,gC19,gC38,kG19,kG38,mG19,mG38,rG19,rG38,sG19,sG38,vG19 ,69580:1 1 1 1.000 1.000 4 TCGA:I 14771833 chr17 43091038 43094751 3714 + 0 AT AC 0 0 ,62895:1 1 1 1.000 1.000 4 TCGA:I 14771834 chr17 43091358 43502987 411630 - 0 AT AC 0 0 ,61576:1 1 1 1.000 1.000 4 TCGA:I 14771835 chr17 43091452 43091696 245 - 0 GC AG 0 0 ,60184:1,62616:1,64252:1,64359:1,64380:1,64832:1,64879:1,66455:1,66529:3,66831:1 10 12 1.200 1.000 4 TCGA:I 14771836 chr17 43091469 43091659 191 + 0 AT AC 0 0 ,62516:1,62616:1,66866:1 3 3 1.000 1.000 4 TCGA:I 14771837 chr17 43091469 43092428 960 + 0 AT AC 0 0 ,63757:1 1 1 1.000 1.000 4 TCGA:I 14771838 chr17 43091485 43091683 199 - 0 AT AC 0 0 ,64832:1 1 1 1.000 1.000 4 TCGA:I 14771839 chr17 43091502 43092173 672 + 0 AT AC 0 0 ,60187:2 1 2 2.000 2.000 4 TCGA:I 14771840 chr17 43091504 43094743 3240 - 0 GT AG 0 aC19,cG19,cG38,gC19,gC38,kG19,kG38,rG19,rG38,sG19,sG38,vG19 ,60203:1,60823:1,61096:1,61360:1,61801:1,62052:1,62567:1,63359:1,64148:1,64710:1,64764:1,68140:1,68565:2,68830:1,68992:2,70051:1,70470:2,70971:1 18 21 1.167 1.000 4 TCGA:I 14771841 chr17 43091504 43094751 3248 - 0 GT AG 0 0 ,68488:2 1 2 2.000 2.000 4 TCGA:I 14771842 chr17 43091504 43094806 3303 - 0 GT AG 0 0 ,69924:1 1 1 1.000 1.000 4 TCGA:I 14771843 chr17 43091517 43091530 14 - 0 GT AG 0 0 ,63232:1,64297:1,67881:1 3 3 1.000 1.000 4 TCGA:I 14771844 chr17 43091557 43091696 140 - 0 GC AG 0 0 ,64489:1 1 1 1.000 1.000 4 TCGA:I 14771845 chr17 43091557 43093677 2121 - 0 GC AG 0 0 ,69559:1 1 1 1.000 1.000 4 TCGA:I 14771846 chr17 43091564 43091683 120 - 0 AT AC 0 0 ,60571:1 1 1 1.000 1.000 4 TCGA:I 14771847 chr17 43091629 43094743 3115 - 0 GT AG 0 aC19,cG19,cG38,gC19,gC38,kG19,kG38,rG19,rG38,sG19,sG38,vG19 ,60234:2,60245:1,60939:1,61793:1,62929:1 5 6 1.200 1.000 4 TCGA:I 14771848 chr17 43091634 43091711 78 - 0 GT AG 0 0 ,59811:1,59908:1,60095:1,60292:1,60903:1,61310:1,61487:1,61597:2,61703:1,62353:1,62702:1,63376:1,63543:1,64056:1,64166:1,64764:1,64985:2,65097:1,65108:1,65137:1,65203:1,65895:1,65921:1,66413:1,66832:1,67667:1,67937:1,68066:1,68492:1,68597:1,68805:1,69160:1,69197:1,69503:1 34 36 1.059 1.000 4 TCGA:I 14771849 chr17 43091634 43091836 203 - 0 GT AG 0 0 ,67943:1 1 1 1.000 1.000 4 TCGA:I 14771850 chr17 43091634 43092098 465 - 0 GT AG 0 0 ,62405:1 1 1 1.000 1.000 4 TCGA:I 14771851 chr17 43091634 43092944 1311 - 0 GT AG 0 0 ,65214:1 1 1 1.000 1.000 4 TCGA:I 14771852 chr17 43091634 43093519 1886 - 0 GT AG 0 0 ,66871:1 1 1 1.000 1.000 4 TCGA:I 14771853 chr17 43091634 43094743 3110 - 0 GT AG 0 aC19,cG19,cG38,gC19,gC38,kG19,kG38,rG19,rG38,sG19,sG38,vG19 ,59825:1,59842:1,59940:1,60196:1,60218:2,60249:1,60263:2,61027:2,61231:1,61291:2,61448:1,61875:1,61929:1,62089:1,62200:1,62250:1,62302:1,62395:1,62512:1,62587:1,62702:1,62859:1,62975:2,63101:1,63396:1,63619:1,63681:1,63888:1,64050:1,64087:1,64113:1,64153:1,64197:2,64266:1,64342:1,64464:1,64517:1,64590:1,64724:1,64845:1,64971:1,65053:2,65116:2,65135:1,65421:1,65530:1,66315:1,66344:1,66377:1,66448:2,66703:2,66705:1,66879:1,67059:1,67203:1,67560:1,67626:1,67708:1,67805:1,68066:1,68071:2,68233:1,68348:2,68540:1,68586:1,68932:1,68992:1,69050:1,69300:1,69731:1,69780:1,69838:1,69935:1,70051:1,70059:1,70060:1,70114:1,70310:1,70368:1,70413:1,70453:1,70502:1,70507:1,70551:1,70739:1,70772:1,70807:1,70857:2 88 101 1.148 1.000 4 TCGA:I 14771854 chr17 43091634 43097243 5610 - 0 GT AG 0 aC19,cG19,cG38,gC19,gC38,kG19,kG38,mG19,mG38,rG19,rG38,sG19,sG38,vG19 ,61421:1 1 1 1.000 1.000 4 TCGA:I 14771855 chr17 43091634 43099774 8141 - 0 GT AG 0 aC19,cG19,cG38,gC19,gC38,kG19,kG38,mG19,mG38,rG19,rG38,sG19,sG38,vG19 ,66887:1,70077:1 2 2 1.000 1.000 4 TCGA:I 14771856 chr17 43091636 43091678 43 + 0 GT AG 0 0 ,70812:2 1 2 2.000 2.000 4 TCGA:I 14771857 chr17 43091650 43094276 2627 - 0 GT AG 0 0 ,60972:2 1 2 2.000 2.000 4 TCGA:I 14771858 chr17 43091650 43094513 2864 - 0 GT AG 0 0 ,67157:1 1 1 1.000 1.000 4 TCGA:I 14771859 chr17 43091650 43094743 3094 - 0 GT AG 0 aC19,cG19,cG38,gC19,gC38,kG19,kG38,rG19,rG38,sG19,sG38,vG19 ,59771:1,60485:1,60731:1,60821:2,61435:1,61499:2,61679:1,62412:1,62549:1,63162:1,64683:1,64976:2,65040:1,65444:1,65808:1,66007:1,66499:1,66574:4,67608:2,68307:1,68386:1,70124:1,70699:2 23 31 1.348 1.000 4 TCGA:I 14771860 chr17 43091650 43094751 3102 - 0 GT AG 0 0 ,63463:1,64115:1,67742:1,68015:1,69976:1 5 5 1.000 1.000 4 TCGA:I 14771861 chr17 43091679 43094492 2814 + 0 GT AG 0 0 ,70310:1 1 1 1.000 1.000 4 TCGA:I 14771862 chr17 43091679 43121853 30175 + 0 GT AG 0 0 ,70467:1 1 1 1.000 1.000 4 TCGA:I 14771863 chr17 43091688 43092098 411 - 0 GT AG 0 0 ,61027:1 1 1 1.000 1.000 4 TCGA:I 14771864 chr17 43091688 43119574 27887 - 0 GT AG 0 0 ,70230:3 1 3 3.000 3.000 4 TCGA:I 14771865 chr17 43091697 43091992 296 - 0 GC AG 0 0 ,64359:2 1 2 2.000 2.000 4 TCGA:I 14771866 chr17 43091697 43092107 411 - 0 GC AG 0 0 ,69574:1 1 1 1.000 1.000 4 TCGA:I 14771867 chr17 43091697 43094763 3067 - 0 GC AG 0 0 ,61761:2 1 2 2.000 2.000 4 TCGA:I 14771868 chr17 43091697 43458503 366807 - 0 GC AG 0 0 ,66265:1 1 1 1.000 1.000 4 TCGA:I 14771869 chr17 43091712 43094548 2837 - 0 GT AG 0 0 ,70195:1 1 1 1.000 1.000 4 TCGA:I 14771870 chr17 43091803 43093398 1596 - 0 GT AG 0 0 ,70470:1 1 1 1.000 1.000 4 TCGA:I 14771871 chr17 43091811 43094743 2933 - 0 GT AG 0 aC19,cG19,cG38,gC19,gC38,kG19,kG38,rG19,rG38,sG19,sG38,vG19 ,66441:1,70710:1 2 2 1.000 1.000 4 TCGA:I 14771872 chr17 43091874 43104922 13049 - 0 GT AG 0 0 ,70224:1 1 1 1.000 1.000 4 TCGA:I 14771873 chr17 43091891 43093048 1158 - 0 GC AG 0 0 ,63668:1 1 1 1.000 1.000 4 TCGA:I 14771874 chr17 43091903 43091936 34 - 0 GC AG 0 0 ,67108:1 1 1 1.000 1.000 4 TCGA:I 14771875 chr17 43091931 43092098 168 - 0 GT AG 0 0 ,64239:1,69012:1 2 2 1.000 1.000 4 TCGA:I 14771876 chr17 43091965 43093689 1725 - 0 GT AG 0 0 ,68530:1 1 1 1.000 1.000 4 TCGA:I 14771877 chr17 43092018 43092323 306 - 0 GC AG 0 0 ,63011:1 1 1 1.000 1.000 4 TCGA:I 14771878 chr17 43092024 43092046 23 - 0 AT AC 0 0 ,70789:1 1 1 1.000 1.000 4 TCGA:I 14771879 chr17 43092099 43092269 171 - 0 GT AG 0 0 ,64879:3,65173:1,69924:1 3 5 1.667 1.000 4 TCGA:I 14771880 chr17 43092112 43092388 277 - 0 GT AG 0 0 ,61360:1 1 1 1.000 1.000 4 TCGA:I 14771881 chr17 43092126 43093701 1576 - 0 GC AG 0 0 ,64510:1 1 1 1.000 1.000 4 TCGA:I 14771882 chr17 43092140 43094743 2604 - 0 GT AG 0 aC19,cG19,cG38,gC19,gC38,kG19,kG38,rG19,rG38,sG19,sG38,vG19 ,59948:2,60065:1,62321:1,62672:1,63281:1,64058:1,64599:1,66220:1,66987:1,67199:1,67202:1,67939:1,69318:1,69904:1 14 15 1.071 1.000 4 TCGA:I 14771883 chr17 43092150 43092229 80 + 0 AT AC 0 0 ,60958:2 1 2 2.000 2.000 4 TCGA:I 14771884 chr17 43092185 43092982 798 - 0 GT AG 0 0 ,63157:1 1 1 1.000 1.000 4 TCGA:I 14771885 chr17 43092272 43093234 963 - 0 GT AG 0 0 ,64301:2 1 2 2.000 2.000 4 TCGA:I 14771886 chr17 43092302 43092652 351 - 0 GC AG 0 0 ,65856:1 1 1 1.000 1.000 4 TCGA:I 14771887 chr17 43092306 43092440 135 - 0 AT AC 0 0 ,60769:1 1 1 1.000 1.000 4 TCGA:I 14771888 chr17 43092314 43092346 33 - 0 GT AG 0 0 ,65995:1 1 1 1.000 1.000 4 TCGA:I 14771889 chr17 43092317 43092992 676 - 0 AT AC 0 0 ,63476:1 1 1 1.000 1.000 4 TCGA:I 14771890 chr17 43092330 43092476 147 - 0 AT AC 0 0 ,64342:1 1 1 1.000 1.000 4 TCGA:I 14771891 chr17 43092330 43093726 1397 - 0 AT AC 0 0 ,65016:1 1 1 1.000 1.000 4 TCGA:I 14771892 chr17 43092330 43346043 253714 - 0 AT AC 0 0 ,65143:1 1 1 1.000 1.000 4 TCGA:I 14771893 chr17 43092347 43092388 42 - 0 GT AG 0 0 ,59827:1,60005:1,60374:1,62702:2,63157:1,63684:1,65808:1,66438:2,68581:2,70064:1,70470:1,70710:1 12 15 1.250 1.000 4 TCGA:I 14771894 chr17 43092379 43092712 334 - 0 AT AC 0 0 ,68168:2 1 2 2.000 2.000 4 TCGA:I 14771895 chr17 43092382 43092406 25 - 0 GC AG 0 0 ,61583:1 1 1 1.000 1.000 4 TCGA:I 14771896 chr17 43092389 43092923 535 - 0 GC AG 0 0 ,61082:1 1 1 1.000 1.000 4 TCGA:I 14771897 chr17 43092402 43104922 12521 + 0 AT AC 0 0 ,61897:1 1 1 1.000 1.000 4 TCGA:I 14771898 chr17 43092429 43092700 272 + 0 AT AC 0 0 ,60821:1 1 1 1.000 1.000 4 TCGA:I 14771899 chr17 43092477 43092514 38 - 0 AT AC 0 0 ,66882:1 1 1 1.000 1.000 4 TCGA:I 14771900 chr17 43092533 43092918 386 - 0 GT AG 0 0 ,63241:1 1 1 1.000 1.000 4 TCGA:I 14771901 chr17 43092599 43092700 102 + 0 AT AC 0 0 ,64934:1 1 1 1.000 1.000 4 TCGA:I 14771902 chr17 43092620 43092643 24 + 0 GT AG 0 0 ,68853:1 1 1 1.000 1.000 4 TCGA:I 14771903 chr17 43092624 43092700 77 + 0 AT AC 0 0 ,63011:1 1 1 1.000 1.000 4 TCGA:I 14771904 chr17 43092679 43092861 183 - 0 GT AG 0 0 ,61792:1 1 1 1.000 1.000 4 TCGA:I 14771905 chr17 43092689 43489485 396797 - 0 GT AG 0 0 ,70078:1 1 1 1.000 1.000 4 TCGA:I 14771906 chr17 43092725 43092737 13 - 0 GT AG 0 0 ,68643:2 1 2 2.000 2.000 4 TCGA:I 14771907 chr17 43092747 43093684 938 + 0 GC AG 0 0 ,70681:1 1 1 1.000 1.000 4 TCGA:I 14771908 chr17 43092804 43093262 459 + 0 AT AC 0 0 ,64744:1 1 1 1.000 1.000 4 TCGA:I 14771909 chr17 43092887 43093117 231 + 0 AT AC 0 0 ,64920:1 1 1 1.000 1.000 4 TCGA:I 14771910 chr17 43092887 43186379 93493 + 0 AT AC 0 0 ,60717:1,60976:1,61267:1,63260:1,63706:1,64710:1,64789:1,65327:1,66052:1,66113:1,66570:1,66827:1,67279:1,68337:1,68427:1,69353:1,69417:1,69996:1 18 18 1.000 1.000 4 TCGA:I 14771911 chr17 43092930 43093112 183 - 0 GC AG 0 0 ,65040:1 1 1 1.000 1.000 4 TCGA:I 14771912 chr17 43093083 43093278 196 + 0 AT AC 0 0 ,68142:1 1 1 1.000 1.000 4 TCGA:I 14771913 chr17 43093130 43115746 22617 + 0 AT AC 0 0 ,61275:1 1 1 1.000 1.000 4 TCGA:I 14771914 chr17 43093152 43094126 975 - 0 GC AG 0 0 ,67367:1 1 1 1.000 1.000 4 TCGA:I 14771915 chr17 43093152 43484378 391227 - 0 GT AG 0 0 ,65571:1 1 1 1.000 1.000 4 TCGA:I 14771916 chr17 43093169 43093519 351 - 0 GT AG 0 0 ,66251:1 1 1 1.000 1.000 4 TCGA:I 14771917 chr17 43093203 43093278 76 + 0 AT AC 0 0 ,61308:1 1 1 1.000 1.000 4 TCGA:I 14771918 chr17 43093214 43093414 201 + 0 GT AG 0 0 ,66231:1,70205:1 2 2 1.000 1.000 4 TCGA:I 14771919 chr17 43093343 43093548 206 - 0 GC AG 0 0 ,60245:1 1 1 1.000 1.000 4 TCGA:I 14771920 chr17 43093384 43093718 335 - 0 GC AG 0 0 ,65996:1 1 1 1.000 1.000 4 TCGA:I 14771921 chr17 43093468 43094208 741 - 0 AT AC 0 0 ,63133:1 1 1 1.000 1.000 4 TCGA:I 14771922 chr17 43093511 43093535 25 + 0 GT AG 0 0 ,60993:1 1 1 1.000 1.000 4 TCGA:I 14771923 chr17 43093511 43118036 24526 + 0 GT AG 0 0 ,61835:2 1 2 2.000 2.000 4 TCGA:I 14771924 chr17 43093520 43093543 24 - 0 GC AG 0 0 ,65156:1 1 1 1.000 1.000 4 TCGA:I 14771925 chr17 43093520 43093591 72 - 0 GT AG 0 0 ,70811:1 1 1 1.000 1.000 4 TCGA:I 14771926 chr17 43093520 43093624 105 - 0 GT AG 0 0 ,61204:1 1 1 1.000 1.000 4 TCGA:I 14771927 chr17 43093536 43093640 105 + 0 GT AG 0 0 ,69300:1 1 1 1.000 1.000 4 TCGA:I 14771928 chr17 43093536 43093774 239 + 0 GT AG 0 0 ,68633:1 1 1 1.000 1.000 4 TCGA:I 14771929 chr17 43093536 43094139 604 + 0 GT AG 0 0 ,63807:1 1 1 1.000 1.000 4 TCGA:I 14771930 chr17 43093536 43400179 306644 + 0 GT AG 0 0 ,68578:1 1 1 1.000 1.000 4 TCGA:I 14771931 chr17 43093563 43099804 6242 + 0 GT AG 0 0 ,59827:2 1 2 2.000 2.000 4 TCGA:I 14771932 chr17 43093566 43094509 944 - 0 AT AC 0 0 ,68150:1 1 1 1.000 1.000 4 TCGA:I 14771933 chr17 43093569 43093855 287 - 0 GT AG 0 0 ,66736:1 1 1 1.000 1.000 4 TCGA:I 14771934 chr17 43093569 43094513 945 - 0 GT AG 0 0 ,65442:1 1 1 1.000 1.000 4 TCGA:I 14771935 chr17 43093631 43093714 84 + 0 GT AG 0 0 ,61408:2,62010:3,62810:1,64252:2,66113:1,68822:1 6 10 1.667 1.500 4 TCGA:I 14771936 chr17 43093702 43094126 425 - 0 GC AG 0 0 ,60669:3 1 3 3.000 3.000 4 TCGA:I 14771937 chr17 43093702 43094567 866 - 0 GC AG 0 0 ,65444:1 1 1 1.000 1.000 4 TCGA:I 14771938 chr17 43093745 43115759 22015 + 0 GT AG 0 0 ,62010:2 1 2 2.000 2.000 4 TCGA:I 14771939 chr17 43093771 43094740 970 + 0 AT AC 0 0 ,60462:1,62134:1,65107:1,68104:1,69303:1 5 5 1.000 1.000 4 TCGA:I 14771940 chr17 43093775 43094092 318 - 0 AT AC 0 0 ,59995:1 1 1 1.000 1.000 4 TCGA:I 14771941 chr17 43093856 43093898 43 - 0 GT AG 0 0 ,63160:1 1 1 1.000 1.000 4 TCGA:I 14771942 chr17 43093869 43094216 348 - 0 GC AG 0 0 ,60679:3,64361:1,66866:1 3 5 1.667 1.000 4 TCGA:I 14771943 chr17 43093872 43093898 27 + 0 AT AC 0 0 ,60091:2 1 2 2.000 2.000 4 TCGA:I 14771944 chr17 43093888 43094206 319 + 0 AT AC 0 0 ,61134:1,64844:1,65672:1,70104:1 4 4 1.000 1.000 4 TCGA:I 14771945 chr17 43093890 43093903 14 + 0 AT AC 0 0 ,66729:6 1 6 6.000 6.000 4 TCGA:I 14771946 chr17 43093974 43093999 26 - 0 GC AG 0 0 ,60187:2 1 2 2.000 2.000 4 TCGA:I 14771947 chr17 43093983 43094297 315 + 0 AT AC 0 0 ,66390:1 1 1 1.000 1.000 4 TCGA:I 14771948 chr17 43094014 43106455 12442 - 0 GT AG 0 aC19,cG19,cG38,gC19,gC38,kG19,kG38,mG19,mG38,rG19,rG38,sG19,sG38,vG19 ,70359:1 1 1 1.000 1.000 4 TCGA:I 14771949 chr17 43094127 43094501 375 - 0 GC AG 0 0 ,65537:1 1 1 1.000 1.000 4 TCGA:I 14771950 chr17 43094127 43103530 9404 - 0 GC AG 0 0 ,62521:1 1 1 1.000 1.000 4 TCGA:I 14771951 chr17 43094130 43094234 105 - 0 GC AG 0 0 ,67261:1 1 1 1.000 1.000 4 TCGA:I 14771952 chr17 43094136 43094297 162 + 0 AT AC 0 0 ,68058:1 1 1 1.000 1.000 4 TCGA:I 14771953 chr17 43094140 43094281 142 - 0 AT AC 0 0 ,66523:1 1 1 1.000 1.000 4 TCGA:I 14771954 chr17 43094140 43094542 403 - 0 AT AC 0 0 ,60468:1 1 1 1.000 1.000 4 TCGA:I 14771955 chr17 43094140 43094571 432 - 0 AT AC 0 0 ,63720:1 1 1 1.000 1.000 4 TCGA:I 14771956 chr17 43094177 43094276 100 - 0 GT AG 0 0 ,63866:1 1 1 1.000 1.000 4 TCGA:I 14771957 chr17 43094207 43130733 36527 + 0 AT AC 0 0 ,68513:1 1 1 1.000 1.000 4 TCGA:I 14771958 chr17 43094250 43094365 116 - 0 GT AG 0 0 ,59808:2 1 2 2.000 2.000 4 TCGA:I 14771959 chr17 43094277 43094513 237 - 0 GT AG 0 0 ,66658:1,71051:1 2 2 1.000 1.000 4 TCGA:I 14771960 chr17 43094277 43094548 272 - 0 GT AG 0 0 ,61943:3 1 3 3.000 3.000 4 TCGA:I 14771961 chr17 43094298 43094423 126 + 0 AT AC 0 0 ,63866:1 1 1 1.000 1.000 4 TCGA:I 14771962 chr17 43094351 43094740 390 - 0 GT AG 0 0 ,69559:1 1 1 1.000 1.000 4 TCGA:I 14771963 chr17 43094365 43094387 23 - 0 GT AG 0 0 ,61464:1 1 1 1.000 1.000 4 TCGA:I 14771964 chr17 43094387 43094513 127 - 0 GT AG 0 0 ,63728:1 1 1 1.000 1.000 4 TCGA:I 14771965 chr17 43094400 43094440 41 + 0 GC AG 0 0 ,68249:1 1 1 1.000 1.000 4 TCGA:I 14771966 chr17 43094477 43094513 37 - 0 GT AG 0 0 ,68245:1 1 1 1.000 1.000 4 TCGA:I 14771967 chr17 43094514 43094627 114 - 0 GC AG 0 0 ,64871:1 1 1 1.000 1.000 4 TCGA:I 14771968 chr17 43094514 43094636 123 - 0 GT AG 0 0 ,68517:1 1 1 1.000 1.000 4 TCGA:I 14771969 chr17 43094587 43106455 11869 - 0 GT AG 0 aC19,cG19,cG38,gC19,gC38,kG19,kG38,mG19,mG38,rG19,rG38,sG19,sG38,vG19 ,62437:1 1 1 1.000 1.000 4 TCGA:I 14771970 chr17 43094621 43095397 777 + 0 AT AC 0 0 ,70498:1 1 1 1.000 1.000 4 TCGA:I 14771971 chr17 43094628 43404933 310306 - 0 GC AG 0 0 ,67210:1 1 1 1.000 1.000 4 TCGA:I 14771972 chr17 43094711 43095543 833 + 0 AT AC 0 0 ,62015:1 1 1 1.000 1.000 4 TCGA:I 14771973 chr17 43094756 43094774 19 - 0 GC AG 0 0 ,66685:1 1 1 1.000 1.000 4 TCGA:I 14771974 chr17 43094764 43094778 15 - 0 GC AG 0 0 ,65686:1 1 1 1.000 1.000 4 TCGA:I 14771975 chr17 43094819 43104213 9395 - 0 AT AC 0 0 ,66473:2 1 2 2.000 2.000 4 TCGA:I 14771976 chr17 43094819 43114261 19443 - 0 AT AC 0 0 ,63359:1 1 1 1.000 1.000 4 TCGA:I 14771977 chr17 43094841 43099815 4975 - 0 GC AG 0 0 ,63757:1 1 1 1.000 1.000 4 TCGA:I 14771978 chr17 43094857 43099840 4984 + 0 GC AG 0 0 ,70260:1 1 1 1.000 1.000 4 TCGA:I 14771979 chr17 43094861 43095437 577 - 0 GT AG aC19,cG19,cG38,gC19,gC38,kG19,kG38,mG19,mG38,rG19,rG38,sG19,sG38,vG19 0 ,65452:1 1 1 1.000 1.000 4 TCGA:I 14771980 chr17 43094861 43095845 985 - 1 GT AG aC19,cG19,cG38,gC19,gC38,kG19,kG38,mG19,mG38,rG19,rG38,sG19,sG38,vG19 aC19,cG19,cG38,gC19,gC38,kG19,kG38,mG19,mG38,rG19,rG38,sG19,sG38,vG19 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474 654 1.380 1.000 4 TCGA:I 14771999 chr17 43095923 43104121 8199 - 0 GT AG aC19,cG19,cG38,gC19,gC38,kG19,kG38,mG19,mG38,rG19,rG38,sG19,sG38,vG19 aC19,cG19,cG38,gC19,gC38,kG19,kG38,mG19,mG38,rG19,rG38,sG19,sG38,vG19 ,63648:1 1 1 1.000 1.000 4 TCGA:I 14772000 chr17 43095923 43106455 10533 - 0 GT AG aC19,cG19,cG38,gC19,gC38,kG19,kG38,mG19,mG38,rG19,rG38,sG19,sG38,vG19 aC19,cG19,cG38,gC19,gC38,kG19,kG38,mG19,mG38,rG19,rG38,sG19,sG38,vG19 ,64519:1,64637:1 2 2 1.000 1.000 4 TCGA:I 14772001 chr17 43095923 43125276 29354 - 0 GT AG aC19,cG19,cG38,gC19,gC38,kG19,kG38,mG19,mG38,rG19,rG38,sG19,sG38,vG19 aC19,gC19,gC38,kG19,kG38,rG19,rG38,sG38,vG19 ,59984:1,69705:2 2 3 1.500 1.500 4 TCGA:I 14772002 chr17 43095944 43097243 1300 - 0 GT AG 0 aC19,cG19,cG38,gC19,gC38,kG19,kG38,mG19,mG38,rG19,rG38,sG19,sG38,vG19 ,59843:1,59854:1,59905:1,60022:1,60308:1,60351:2,60422:1,60769:1,61089:2,61096:1,61564:1,61683:1,61775:1,61976:1,62082:1,62220:1,62221:1,62389:1,62435:2,62460:1,62487:1,62851:1,62888:1,62892:1,63132:2,63230:1,63467:1,63498:1,63706:1,63773:1,63944:5,64036:1,64046:1,64058:1,64148:1,64170:1,64294:1,64365:1,64417:1,64525:1,64830:2,65021:2,65053:1,65286:1,65320:1,65571:1,65617:1,66051:3,66156:1,66269:1,66272:1,66325:1,66382:1,66574:1,66636:1,66725:3,66989:1,67111:1,67113:1,67296:1,67367:1,67452:1,67578:1,67608:1,67645:1,67742:2,67805:1,68028:2,68172:1,68406:1,68459:1,68472:1,68643:1,68700:1,68822:2,68946:2,69167:1,69226:1,69231:2,69321:1,69430:2,69556:1,69587:1,69655:1,69798:1,69807:1,70021:1,70047:2,70111:1,70368:1,70450:1,70452:1,70461:1,70638:2,70673:1,70728:1 96 118 1.229 1.000 4 TCGA:I 14772003 chr17 43095944 43099774 3831 - 0 GT AG 0 aC19,cG19,cG38,gC19,gC38,kG19,kG38,mG19,mG38,rG19,rG38,sG19,sG38,vG19 ,70021:2 1 2 2.000 2.000 4 TCGA:I 14772004 chr17 43096117 43096251 135 - 0 GC AG 0 0 ,68089:1 1 1 1.000 1.000 4 TCGA:I 14772005 chr17 43096117 43118735 22619 - 0 GC AG 0 0 ,66255:1 1 1 1.000 1.000 4 TCGA:I 14772006 chr17 43096146 43096280 135 + 0 GC AG 0 0 ,65576:1 1 1 1.000 1.000 4 TCGA:I 14772007 chr17 43096146 43096475 330 + 0 GC AG 0 0 ,60769:1 1 1 1.000 1.000 4 TCGA:I 14772008 chr17 43096150 43096479 330 + 0 GT AG 0 0 ,60769:2 1 2 2.000 2.000 4 TCGA:I 14772009 chr17 43096252 43096446 195 - 0 GT AG 0 0 ,60091:1 1 1 1.000 1.000 4 TCGA:I 14772010 chr17 43096252 43120639 24388 - 0 GC AG 0 0 ,64991:1 1 1 1.000 1.000 4 TCGA:I 14772011 chr17 43096252 43367371 271120 - 0 GC AG 0 0 ,68880:1 1 1 1.000 1.000 4 TCGA:I 14772012 chr17 43096252 43593160 496909 - 0 GC AG 0 0 ,60481:1 1 1 1.000 1.000 4 TCGA:I 14772013 chr17 43096300 43096494 195 - 0 GT AG 0 0 ,67261:1 1 1 1.000 1.000 4 TCGA:I 14772014 chr17 43096350 43375871 279522 - 0 GC AG 0 0 ,67063:1 1 1 1.000 1.000 4 TCGA:I 14772015 chr17 43096368 43096562 195 - 0 GT AG 0 0 ,70301:1 1 1 1.000 1.000 4 TCGA:I 14772016 chr17 43096447 43096642 196 - 0 GC AG 0 0 ,64662:1 1 1 1.000 1.000 4 TCGA:I 14772017 chr17 43096447 43573127 476681 - 0 GC AG 0 0 ,67327:1 1 1 1.000 1.000 4 TCGA:I 14772018 chr17 43097138 43097243 106 - 0 GT AG 0 aC19,cG19,cG38,gC19,gC38,kG19,kG38,mG19,mG38,rG19,rG38,sG19,sG38,vG19 ,60720:1,61583:1,64971:1,66529:3,67966:4 5 10 2.000 1.000 4 TCGA:I 14772019 chr17 43097138 43099774 2637 - 0 GT AG 0 aC19,cG19,cG38,gC19,gC38,kG19,kG38,mG19,mG38,rG19,rG38,sG19,sG38,vG19 ,70174:1 1 1 1.000 1.000 4 TCGA:I 14772020 chr17 43097290 43097492 203 - 0 GT AG aC19,cG19,cG38,gC19,gC38,kG19,kG38,mG19,mG38,rG19,rG38,sG19,sG38,vG19 0 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,66135:2,69353:1 2 3 1.500 1.500 4 TCGA:I 14772050 chr17 43098473 43098931 459 - 0 GC AG 0 0 ,66135:2 1 2 2.000 2.000 4 TCGA:I 14772051 chr17 43098479 43098937 459 - 0 GC AG 0 0 ,66135:2 1 2 2.000 2.000 4 TCGA:I 14772052 chr17 43098560 43099461 902 + 0 GT AG 0 0 ,66759:1 1 1 1.000 1.000 4 TCGA:I 14772053 chr17 43098570 43098709 140 - 0 AT AC 0 0 ,62813:1 1 1 1.000 1.000 4 TCGA:I 14772054 chr17 43098570 43099472 903 - 0 AT AC 0 0 ,63835:1,65642:1,70970:1 3 3 1.000 1.000 4 TCGA:I 14772055 chr17 43098598 43099053 456 - 0 GT AG 0 0 ,59935:1,64036:1,65716:1,69715:1,70989:2 5 6 1.200 1.000 4 TCGA:I 14772056 chr17 43098598 43099501 904 - 0 GT AG 0 0 ,66224:1 1 1 1.000 1.000 4 TCGA:I 14772057 chr17 43098598 43376510 277913 - 0 GT AG 0 0 ,59831:1,60271:2,61678:1,65048:1,65208:1 5 6 1.200 1.000 4 TCGA:I 14772058 chr17 43098603 43099058 456 + 0 GT AG 0 0 ,64036:1 1 1 1.000 1.000 4 TCGA:I 14772059 chr17 43098603 43376515 277913 + 0 GT AG 0 0 ,59831:1,60271:2,61678:1,65048:1,65208:1 5 6 1.200 1.000 4 TCGA:I 14772060 chr17 43098612 43099067 456 - 0 GC AG 0 0 ,64036:1 1 1 1.000 1.000 4 TCGA:I 14772061 chr17 43098612 43376524 277913 - 0 GT AG 0 0 ,59831:1,60271:2,61678:1,65048:1,65208:1 5 6 1.200 1.000 4 TCGA:I 14772062 chr17 43098612 43420428 321817 - 0 GT AG 0 0 ,64002:1 1 1 1.000 1.000 4 TCGA:I 14772063 chr17 43098616 43099071 456 - 0 GT AG 0 0 ,59914:1,64036:1 2 2 1.000 1.000 4 TCGA:I 14772064 chr17 43098616 43376528 277913 - 0 GC AG 0 0 ,59831:1,60271:2,61678:1,65048:1,65208:1 5 6 1.200 1.000 4 TCGA:I 14772065 chr17 43098616 43420432 321817 - 0 GC AG 0 0 ,64002:1 1 1 1.000 1.000 4 TCGA:I 14772066 chr17 43098622 43098937 316 - 0 GC AG 0 0 ,66135:2 1 2 2.000 2.000 4 TCGA:I 14772067 chr17 43098622 43099525 904 - 0 GC AG 0 0 ,59926:1,69405:1 2 2 1.000 1.000 4 TCGA:I 14772068 chr17 43098622 43099569 948 - 0 GC AG 0 0 ,67337:1 1 1 1.000 1.000 4 TCGA:I 14772069 chr17 43098630 43098945 316 + 0 GT AG 0 0 ,70849:1 1 1 1.000 1.000 4 TCGA:I 14772070 chr17 43098710 43225235 126526 - 0 AT AC 0 0 ,63073:1 1 1 1.000 1.000 4 TCGA:I 14772071 chr17 43098719 43099315 597 + 0 GC AG 0 0 ,61057:1 1 1 1.000 1.000 4 TCGA:I 14772072 chr17 43098798 43238057 139260 - 0 GT AG 0 0 ,61408:1 1 1 1.000 1.000 4 TCGA:I 14772073 chr17 43098859 43099311 453 - 0 GC AG 0 0 ,64309:1 1 1 1.000 1.000 4 TCGA:I 14772074 chr17 43098938 43099390 453 - 0 GC AG 0 0 ,64562:1 1 1 1.000 1.000 4 TCGA:I 14772075 chr17 43098961 43099100 140 + 0 GC AG 0 0 ,64317:4 1 4 4.000 4.000 4 TCGA:I 14772076 chr17 43099025 43099472 448 - 0 AT AC 0 0 ,69328:1 1 1 1.000 1.000 4 TCGA:I 14772077 chr17 43099034 43099315 282 + 0 GC AG 0 0 ,69507:1 1 1 1.000 1.000 4 TCGA:I 14772078 chr17 43099101 43099548 448 + 0 GC AG 0 0 ,66767:1 1 1 1.000 1.000 4 TCGA:I 14772079 chr17 43099317 43099333 17 - 0 GC AG 0 0 ,62932:1 1 1 1.000 1.000 4 TCGA:I 14772080 chr17 43099359 43122299 22941 - 0 GT AG 0 0 ,61836:2 1 2 2.000 2.000 4 TCGA:I 14772081 chr17 43099359 43443588 344230 - 0 GT AG 0 0 ,67990:2,69736:1 2 3 1.500 1.500 4 TCGA:I 14772082 chr17 43099385 43124870 25486 - 0 GC AG 0 0 ,68601:1 1 1 1.000 1.000 4 TCGA:I 14772083 chr17 43099418 43183806 84389 - 0 AT AC 0 0 ,60294:1 1 1 1.000 1.000 4 TCGA:I 14772084 chr17 43099430 43183818 84389 - 0 GT AG 0 0 ,60294:1 1 1 1.000 1.000 4 TCGA:I 14772085 chr17 43099482 43100092 611 + 0 GC AG 0 0 ,61951:1 1 1 1.000 1.000 4 TCGA:I 14772086 chr17 43099502 43184596 85095 - 0 GT AG 0 0 ,68676:1 1 1 1.000 1.000 4 TCGA:I 14772087 chr17 43099502 43237075 137574 - 0 GT AG 0 0 ,62617:1,63413:1 2 2 1.000 1.000 4 TCGA:I 14772088 chr17 43099507 43184601 85095 + 0 GT AG 0 0 ,68676:1 1 1 1.000 1.000 4 TCGA:I 14772089 chr17 43099536 43100092 557 + 0 GC AG 0 0 ,61982:1,63241:1,67130:1 3 3 1.000 1.000 4 TCGA:I 14772090 chr17 43099648 43115817 16170 + 0 GC AG 0 0 ,64764:3 1 3 3.000 3.000 4 TCGA:I 14772091 chr17 43099672 43099774 103 - 0 GT AG 0 aC19,cG19,cG38,gC19,gC38,kG19,kG38,mG19,mG38,rG19,rG38,sG19,sG38,vG19 ,65697:1 1 1 1.000 1.000 4 TCGA:I 14772092 chr17 43099878 43101942 2065 - 0 GT AG 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43100852 43103576 2725 - 0 GC AG 0 0 ,69996:1 1 1 1.000 1.000 4 TCGA:I 14772130 chr17 43100852 43125088 24237 - 0 GC AG 0 0 ,62193:1 1 1 1.000 1.000 4 TCGA:I 14772131 chr17 43100852 43294763 193912 - 0 GC AG 0 0 ,59771:1 1 1 1.000 1.000 4 TCGA:I 14772132 chr17 43100875 43101779 905 + 0 GC AG 0 0 ,64446:1,70759:1 2 2 1.000 1.000 4 TCGA:I 14772133 chr17 43100891 43101661 771 - 0 GT AG 0 0 ,68856:1 1 1 1.000 1.000 4 TCGA:I 14772134 chr17 43100962 43376510 275549 - 0 GT AG 0 0 ,66902:1 1 1 1.000 1.000 4 TCGA:I 14772135 chr17 43100967 43376515 275549 + 0 GT AG 0 0 ,66902:1 1 1 1.000 1.000 4 TCGA:I 14772136 chr17 43101037 43101087 51 + 0 AT AC 0 0 ,64314:4 1 4 4.000 4.000 4 TCGA:I 14772137 chr17 43101037 43227792 126756 + 0 AT AC 0 0 ,68682:1 1 1 1.000 1.000 4 TCGA:I 14772138 chr17 43101292 43101597 306 + 0 GT AG 0 0 ,67038:1 1 1 1.000 1.000 4 TCGA:I 14772139 chr17 43101298 43102171 874 - 0 AT AC 0 0 ,66069:1 1 1 1.000 1.000 4 TCGA:I 14772140 chr17 43101311 43101750 440 - 0 GC AG 0 0 ,63476:1,68065:1 2 2 1.000 1.000 4 TCGA:I 14772141 chr17 43101311 43102016 706 - 0 GC AG 0 0 ,60760:1,67975:2 2 3 1.500 1.500 4 TCGA:I 14772142 chr17 43101317 43101756 440 - 0 GC AG 0 0 ,68065:1 1 1 1.000 1.000 4 TCGA:I 14772143 chr17 43101317 43101984 668 - 0 GC AG 0 0 ,60373:1 1 1 1.000 1.000 4 TCGA:I 14772144 chr17 43101404 43101543 140 - 0 GC AG 0 0 ,63485:1 1 1 1.000 1.000 4 TCGA:I 14772145 chr17 43101450 43102325 876 - 0 GC AG 0 0 ,60316:1,66061:3,66390:1,66976:2 4 7 1.750 1.500 4 TCGA:I 14772146 chr17 43101458 43102198 741 + 0 GT AG 0 0 ,68116:1 1 1 1.000 1.000 4 TCGA:I 14772147 chr17 43101548 43101799 252 + 0 GC AG 0 0 ,65856:2 1 2 2.000 2.000 4 TCGA:I 14772148 chr17 43101598 43102451 854 + 0 GT AG 0 0 ,67662:1,68565:1,70328:1 3 3 1.000 1.000 4 TCGA:I 14772149 chr17 43101623 43102609 987 - 0 GC AG 0 0 ,62702:2 1 2 2.000 2.000 4 TCGA:I 14772150 chr17 43101630 43103993 2364 + 0 GT AG 0 0 ,63476:1 1 1 1.000 1.000 4 TCGA:I 14772151 chr17 43101646 43102045 400 + 0 GT AG 0 0 ,67833:1 1 1 1.000 1.000 4 TCGA:I 14772152 chr17 43101704 43102558 855 - 0 AT AC 0 0 ,64496:1 1 1 1.000 1.000 4 TCGA:I 14772153 chr17 43101713 43102567 855 + 0 GC AG 0 0 ,61493:1,64265:1,64496:1 3 3 1.000 1.000 4 TCGA:I 14772154 chr17 43101751 43102016 266 - 0 GC AG 0 0 ,62444:1 1 1 1.000 1.000 4 TCGA:I 14772155 chr17 43101751 43102603 853 - 0 GC AG 0 0 ,59824:1,61111:1,64076:1,64657:2,67923:1,68587:1,69121:1,69244:1,69373:1,69565:1,69880:1,69975:1 12 13 1.083 1.000 4 TCGA:I 14772156 chr17 43101757 43102022 266 - 0 GC AG 0 0 ,62444:1 1 1 1.000 1.000 4 TCGA:I 14772157 chr17 43101757 43102190 434 - 0 GC AG 0 0 ,66886:1,70359:1 2 2 1.000 1.000 4 TCGA:I 14772158 chr17 43101757 43102609 853 - 0 GC AG 0 0 ,59824:1,69373:1,69565:1 3 3 1.000 1.000 4 TCGA:I 14772159 chr17 43101757 43125088 23332 - 0 GC AG 0 0 ,62193:1 1 1 1.000 1.000 4 TCGA:I 14772160 chr17 43101757 43294763 193007 - 0 GC AG 0 0 ,59771:1 1 1 1.000 1.000 4 TCGA:I 14772161 chr17 43102023 43102772 750 - 0 GC AG 0 0 ,68742:1 1 1 1.000 1.000 4 TCGA:I 14772162 chr17 43102023 43382495 280473 - 0 GT AG 0 0 ,60738:1 1 1 1.000 1.000 4 TCGA:I 14772163 chr17 43102023 43408863 306841 - 0 GC AG 0 0 ,66392:1 1 1 1.000 1.000 4 TCGA:I 14772164 chr17 43102097 43102678 582 + 0 GT AG 0 0 ,62257:1 1 1 1.000 1.000 4 TCGA:I 14772165 chr17 43102137 43106091 3955 - 0 GC AG 0 0 ,65996:1 1 1 1.000 1.000 4 TCGA:I 14772166 chr17 43102181 43103389 1209 - 0 GT AG 0 0 ,64205:1 1 1 1.000 1.000 4 TCGA:I 14772167 chr17 43102185 43102603 419 - 0 GC AG 0 0 ,61118:1,63784:1,64273:1,69499:1,69953:1,70361:2,70627:1 7 8 1.143 1.000 4 TCGA:I 14772168 chr17 43102191 43102609 419 - 0 GC AG 0 0 ,61118:1,63610:1,63784:1,68269:1,69499:1,70361:2,70627:1 7 8 1.143 1.000 4 TCGA:I 14772169 chr17 43102304 43102587 284 - 0 GT AG 0 0 ,63476:1,69306:1 2 2 1.000 1.000 4 TCGA:I 14772170 chr17 43102320 43102603 284 - 0 GC AG 0 0 ,69115:1 1 1 1.000 1.000 4 TCGA:I 14772171 chr17 43102326 43102609 284 - 0 GC AG 0 0 ,66512:1,67575:1 2 2 1.000 1.000 4 TCGA:I 14772172 chr17 43102349 43103048 700 + 0 GC AG 0 0 ,63009:1,63880:1 2 2 1.000 1.000 4 TCGA:I 14772173 chr17 43102464 43102772 309 - 0 GC AG 0 0 ,69657:1 1 1 1.000 1.000 4 TCGA:I 14772174 chr17 43102477 43102772 296 - 0 GC AG 0 0 ,70105:1 1 1 1.000 1.000 4 TCGA:I 14772175 chr17 43102500 43102795 296 + 0 GC AG 0 0 ,60386:1 1 1 1.000 1.000 4 TCGA:I 14772176 chr17 43102633 43102924 292 + 0 GT AG 0 0 ,60057:1,60298:1,61016:1,61141:1,61446:1,61798:1,63754:1,63973:1,63987:1,64149:1,65428:1,66014:1,67220:1,67350:4,67430:1,67485:1,68038:2,68138:1,68392:1,68548:1,68632:2,68957:1,69021:1,69272:1,69785:1,69823:1,70751:1 27 32 1.185 1.000 4 TCGA:I 14772177 chr17 43102633 43103048 416 + 0 GT AG 0 0 ,60852:1 1 1 1.000 1.000 4 TCGA:I 14772178 chr17 43102633 43150377 47745 + 0 GT AG 0 0 ,61820:1 1 1 1.000 1.000 4 TCGA:I 14772179 chr17 43102633 43171920 69288 + 0 GT AG 0 0 ,68900:1 1 1 1.000 1.000 4 TCGA:I 14772180 chr17 43102633 43187457 84825 + 0 GT AG 0 0 ,69898:1 1 1 1.000 1.000 4 TCGA:I 14772181 chr17 43102633 43204215 101583 + 0 GT AG 0 0 ,60202:1,61499:1,62012:1,62418:1,62942:1,62943:1,62971:1,65751:1,66564:1,68941:1,69949:1,70316:1,70590:1,71070:1 14 14 1.000 1.000 4 TCGA:I 14772182 chr17 43102633 43209353 106721 + 0 GT AG 0 0 ,66213:1 1 1 1.000 1.000 4 TCGA:I 14772183 chr17 43102633 43223044 120412 + 0 GT AG 0 0 ,60908:1,63329:1,63352:1,65565:1 4 4 1.000 1.000 4 TCGA:I 14772184 chr17 43102633 43227256 124624 + 0 GT AG 0 0 ,60301:1,60441:1,61978:1,62692:2,62754:1,63485:1,63914:1,65429:1,65682:2,66926:1,67119:1,68132:1,68190:1,68205:1,68533:1,68597:1,69193:1,69398:1,69702:1,69879:1,69963:1 21 23 1.095 1.000 4 TCGA:I 14772185 chr17 43102633 43229443 126811 + 0 GT AG 0 0 ,59922:1,60174:1,61125:1,61876:1,62199:1,62488:2,62562:1,63187:1,63929:1,64032:2,64212:1,64467:1,65583:1,66729:1,67206:2,68493:1,68513:1,68974:1,69643:3,70124:1,70450:1 21 26 1.238 1.000 4 TCGA:I 14772186 chr17 43102633 43359195 256563 + 0 GT AG 0 0 ,66891:1 1 1 1.000 1.000 4 TCGA:I 14772187 chr17 43102633 43398405 295773 + 0 GT AG 0 0 ,70237:1 1 1 1.000 1.000 4 TCGA:I 14772188 chr17 43102633 43403582 300950 + 0 GT AG 0 0 ,62531:1,70378:1 2 2 1.000 1.000 4 TCGA:I 14772189 chr17 43102633 43466834 364202 + 0 GT AG 0 0 ,62330:1 1 1 1.000 1.000 4 TCGA:I 14772190 chr17 43102633 43481463 378831 + 0 GT AG 0 0 ,65360:1,65379:1,65965:2,69484:1 4 5 1.250 1.000 4 TCGA:I 14772191 chr17 43102633 43483301 380669 + 0 GT AG 0 0 ,68676:1 1 1 1.000 1.000 4 TCGA:I 14772192 chr17 43102796 43103599 804 + 0 GC AG 0 0 ,62330:1,62376:2,64361:1 3 4 1.333 1.000 4 TCGA:I 14772193 chr17 43102857 43103525 669 - 0 AT AC 0 0 ,60148:1 1 1 1.000 1.000 4 TCGA:I 14772194 chr17 43102925 43103048 124 + 0 GC AG 0 0 ,61144:1 1 1 1.000 1.000 4 TCGA:I 14772195 chr17 43102988 43103525 538 - 0 AT AC 0 0 ,70593:1 1 1 1.000 1.000 4 TCGA:I 14772196 chr17 43102988 43585324 482337 - 0 AT AC 0 0 ,70268:1 1 1 1.000 1.000 4 TCGA:I 14772197 chr17 43103026 43320767 217742 - 0 GC AG 0 0 ,59875:1,60435:1,60837:1,65261:1,65728:1,66512:1,67112:1,67715:1 8 8 1.000 1.000 4 TCGA:I 14772198 chr17 43103049 43150067 47019 + 0 GC AG 0 0 ,66870:1 1 1 1.000 1.000 4 TCGA:I 14772199 chr17 43103136 43104041 906 + 0 GC AG 0 0 ,66525:1 1 1 1.000 1.000 4 TCGA:I 14772200 chr17 43103328 43103832 505 - 0 GC AG 0 0 ,60328:3 1 3 3.000 3.000 4 TCGA:I 14772201 chr17 43103440 43104030 591 - 0 GC AG 0 0 ,61501:1 1 1 1.000 1.000 4 TCGA:I 14772202 chr17 43104031 43105294 1264 - 0 GC AG 0 0 ,60848:1 1 1 1.000 1.000 4 TCGA:I 14772203 chr17 43104154 43104913 760 + 0 GT AG 0 0 ,67762:1 1 1 1.000 1.000 4 TCGA:I 14772204 chr17 43104156 43106455 2300 - 0 GT AG 0 aC19,cG19,cG38,gC19,gC38,kG19,kG38,mG19,mG38,rG19,rG38,sG19,sG38,vG19 ,68910:1 1 1 1.000 1.000 4 TCGA:I 14772205 chr17 43104167 43104193 27 - 0 AT AC 0 0 ,61404:1 1 1 1.000 1.000 4 TCGA:I 14772206 chr17 43104262 43104385 124 - 0 GT AG aC19,cG19,cG38,gC19,gC38,kG19,kG38,mG19,mG38,rG19,rG38,sG19,sG38,vG19 0 ,62062:1,62093:1,64458:2,66120:1,67081:2,68066:1,69160:1,70027:1,70084:1 9 11 1.222 1.000 4 TCGA:I 14772207 chr17 43104262 43104624 363 - 0 GT AG aC19,cG19,cG38,gC19,gC38,kG19,kG38,mG19,mG38,rG19,rG38,sG19,sG38,vG19 0 ,64515:1,68670:1,69676:1 3 3 1.000 1.000 4 TCGA:I 14772208 chr17 43104262 43104761 500 - 0 GT AG aC19,cG19,cG38,gC19,gC38,kG19,kG38,mG19,mG38,rG19,rG38,sG19,sG38,vG19 0 ,60234:1,62181:1,62499:1,65040:1,67274:1 5 5 1.000 1.000 4 TCGA:I 14772209 chr17 43104262 43104867 606 - 1 GT AG aC19,cG19,cG38,gC19,gC38,kG19,kG38,mG19,mG38,rG19,rG38,sG19,sG38,vG19 aC19,cG19,cG38,gC19,gC38,kG19,kG38,mG19,mG38,rG19,rG38,sG19,sG38,vG19 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,59780:1,59783:1,59808:1,59823:1,59933:1,59935:1,59936:1,59945:1,59949:1,59965:1,59988:1,59994:1,60069:1,60073:2,60111:1,60158:2,60173:1,60183:1,60184:1,60185:1,60187:1,60198:1,60203:2,60217:1,60235:3,60260:1,60296:2,60305:1,60373:1,60406:1,60463:1,60482:1,60485:1,60488:1,60492:1,60504:1,60505:1,60553:1,60556:1,60559:1,60568:5,60576:1,60595:2,60646:1,60647:1,60652:1,60653:1,60686:2,60688:1,60708:1,60710:1,60727:2,60731:1,60736:1,60742:1,60745:1,60758:1,60762:2,60769:1,60777:1,60789:1,60799:1,60805:2,60807:1,60819:1,60823:1,60824:1,60825:1,60848:1,60916:1,60925:1,60930:1,60949:1,60961:1,61022:1,61027:2,61049:1,61057:1,61099:1,61119:1,61125:1,61142:1,61146:1,61154:1,61192:1,61236:1,61242:1,61255:1,61259:1,61262:1,61276:1,61296:1,61336:1,61364:3,61368:1,61382:1,61404:2,61420:1,61438:1,61442:1,61459:1,61502:1,61505:1,61507:2,61517:1,61522:1,61530:1,61533:1,61542:2,61563:2,61590:1,61591:2,61612:1,61617:1,61625:1,61633:1,61662:1,61674:1,61703:3,61706:1,61750:1,61759:1,61792:1,61839:1,61848:1,61929:1,61932:1,61943:1,61946:1,61948:1,61982:1,61989:3,61997:1,62012:2,62015:3,62025:2,62044:1,62058:2,62061:4,62136:1,62229:1,62233:1,62242:1,62258:1,62264:2,62301:2,62330:4,62342:2,62344:1,62376:3,62380:1,62385:2,62386:1,62398:1,62412:1,62415:1,62425:2,62428:1,62432:1,62448:1,62469:1,62476:1,62508:1,62516:3,62533:1,62548:1,62558:2,62562:2,62573:1,62579:1,62609:1,62616:1,62654:1,62702:1,62744:1,62854:2,62856:1,62890:1,62892:1,62911:1,62916:2,62954:1,62968:1,62986:1,63015:1,63039:1,63060:1,63127:1,63133:1,63135:1,63162:1,63166:1,63187:1,63188:1,63205:1,63214:1,63218:2,63222:1,63232:1,63235:1,63241:6,63254:1,63257:1,63337:1,63378:2,63381:1,63405:1,63436:2,63446:1,63473:2,63477:1,63506:1,63518:2,63524:3,63537:1,63547:1,63555:1,63587:1,63589:2,63590:1,63594:2,63607:1,63629:2,63631:3,63640:1,63648:1,63664:1,63679:1,63726:1,63738:2,63789:1,63797:1,63808:1,63824:1,63831:1,63843:1,63877:1,63880:1,63898:1,63900:1,63922:1,63943:1,63944:2,63946:1,63956:1,63970:1,64036:2,64039:2,64046:1,64061:1,64064:1,64098:2,64144:1,64148:2,64170:2,64184:1,64231:1,64239:2,64245:1,64271:1,64281:1,64283:1,64294:1,64297:3,64331:2,64332:1,64340:1,64357:1,64360:1,64375:2,64380:2,64389:1,64390:1,64411:1,64468:1,64494:2,64525:1,64528:2,64532:1,64575:1,64590:2,64608:1,64641:1,64647:1,64656:1,64657:1,64660:1,64698:1,64753:1,64764:1,64798:1,64801:2,64832:2,64833:1,64837:1,64842:1,64912:1,64922:1,64941:1,64945:1,64953:1,64968:1,64972:1,64976:1,65007:1,65012:1,65024:2,65027:1,65040:3,65055:1,65079:1,65091:1,65173:1,65200:1,65212:2,65239:1,65250:1,65275:1,65280:1,65282:2,65297:1,65305:1,65318:1,65339:1,65369:1,65377:1,65419:1,65420:2,65434:3,65530:1,65537:4,65571:1,65591:1,65644:1,65661:2,65688:1,65696:1,65720:1,65777:1,65783:1,65784:1,65802:1,65810:1,65834:1,65838:1,65845:1,65856:1,65859:1,65870:2,65906:1,65931:2,65969:1,65996:2,66018:1,66021:1,66053:1,66061:1,66094:1,66131:1,66161:1,66199:3,66213:1,66218:3,66269:2,66275:1,66291:1,66327:1,66335:1,66369:1,66376:1,66390:1,66392:3,66395:1,66452:1,66466:1,66473:4,66569:1,66574:3,66605:1,66609:3,66616:1,66632:3,66639:1,66643:2,66658:1,66680:1,66703:1,66706:1,66719:1,66722:1,66736:1,66738:1,66812:1,66822:1,66840:1,66850:1,66858:2,66866:1,66871:1,66884:1,66898:1,66912:1,66942:1,66953:1,66959:2,66992:1,67009:1,67038:1,67043:1,67054:1,67055:1,67071:1,67075:1,67081:1,67094:1,67105:1,67124:3,67130:1,67135:1,67155:1,67169:1,67171:1,67179:1,67183:2,67199:1,67204:1,67223:1,67252:1,67253:1,67264:1,67357:1,67367:6,67406:1,67423:2,67431:1,67447:2,67452:1,67490:1,67497:2,67503:2,67538:1,67546:1,67560:1,67562:1,67575:1,67600:1,67608:2,67641:1,67667:3,67685:1,67748:1,67750:3,67751:1,67762:2,67782:1,67798:1,67802:3,67813:1,67836:1,67848:1,67851:1,67863:2,67881:2,67882:1,67884:1,67900:1,67908:1,67930:1,67932:1,67937:2,67940:1,67978:1,68009:1,68014:1,68023:1,68065:1,68066:1,68075:3,68109:1,68136:1,68140:1,68170:1,68176:1,68185:1,68189:1,68209:1,68234:1,68243:1,68246:1,68249:4,68255:1,68271:1,68285:2,68299:1,68313:3,68321:1,68329:1,68385:1,68398:1,68413:2,68425:2,68449:2,68458:1,68469:1,68485:1,68513:1,68520:1,68530:1,68540:2,68565:2,68571:2,68576:2,68609:1,68615:2,68621:1,68637:1,68643:2,68665:1,68676:1,68687:2,68700:1,68702:1,68732:1,68739:1,68786:1,68822:3,68855:1,68880:1,68893:1,68910:4,68929:1,68930:1,68948:1,68984:1,69026:1,69115:1,69125:1,69148:1,69176:1,69178:2,69202:3,69210:1,69218:1,69219:1,69221:1,69228:1,69231:1,69300:1,69304:1,69306:1,69309:1,69352:1,69357:1,69373:1,69382:2,69410:1,69422:1,69430:1,69434:2,69443:1,69462:1,69464:1,69479:1,69487:1,69488:3,69503:1,69521:2,69523:1,69534:1,69553:1,69559:1,69571:1,69573:1,69598:1,69601:1,69612:1,69643:2,69669:1,69677:1,69678:1,69688:1,69709:1,69719:1,69721:1,69760:1,69769:1,69843:1,69845:1,69902:1,69928:2,69934:1,69957:1,69964:2,69983:3,69984:1,69988:1,69996:1,70008:2,70029:1,70036:1,70064:1,70067:1,70072:1,70104:2,70109:1,70125:1,70130:1,70143:1,70174:1,70196:1,70244:1,70249:1,70252:1,70260:4,70266:1,70288:1,70290:1,70328:1,70345:1,70351:2,70373:1,70399:1,70402:1,70404:1,70418:2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661 862 1.304 1.000 4 TCGA:I 14772271 chr17 43106534 43125270 18737 - 0 GT AG aC19,cG19,cG38,gC19,gC38,kG19,kG38,mG19,mG38,rG19,rG38,sG19,sG38,vG19 aC19,gC19,gC38,kG19,kG38,mG19,mG38,rG19,rG38,sG19,vG19 ,59926:2,60093:3,62318:1,62773:1,62828:1,62968:1,63033:1,63543:1,64103:1,66071:1,66730:1,67367:1,67497:1,68004:1,68798:2,69353:2,70407:1 17 22 1.294 1.000 4 TCGA:I 14772272 chr17 43106534 43125276 18743 - 0 GT AG aC19,cG19,cG38,gC19,gC38,kG19,kG38,mG19,mG38,rG19,rG38,sG19,sG38,vG19 aC19,gC19,gC38,kG19,kG38,rG19,rG38,sG38,vG19 ,60006:1,60669:2,60745:1,62072:1,62516:1,62958:1,63254:1,64837:1,66197:1,67918:1,68014:1,68201:2,68902:1,68910:1,69265:1,70189:1,70611:1,70613:1 18 20 1.111 1.000 4 TCGA:I 14772273 chr17 43106534 43158975 52442 - 0 GT AG aC19,cG19,cG38,gC19,gC38,kG19,kG38,mG19,mG38,rG19,rG38,sG19,sG38,vG19 0 ,66157:1 1 1 1.000 1.000 4 TCGA:I 14772274 chr17 43106534 43166979 60446 - 0 GT AG aC19,cG19,cG38,gC19,gC38,kG19,kG38,mG19,mG38,rG19,rG38,sG19,sG38,vG19 aC19,gC19,gC38,kG19,kG38,sG19,sG38 ,59936:3 1 3 3.000 3.000 4 TCGA:I 14772275 chr17 43106534 43170125 63592 - 0 GT AG aC19,cG19,cG38,gC19,gC38,kG19,kG38,mG19,mG38,rG19,rG38,sG19,sG38,vG19 aC19,gC19,gC38,kG19,kG38,rG19,rG38,sG19,sG38 ,70916:1 1 1 1.000 1.000 4 TCGA:I 14772276 chr17 43106543 43115725 9183 + 0 AT AC 0 aC19,cG19,cG38,gC19,gC38,kG19,kG38,mG19,mG38,rG19,rG38,sG19,sG38,vG19 ,59840:1,59948:1,61304:1,62187:1,66931:1,68930:1,70359:3 7 9 1.286 1.000 4 TCGA:I 14772277 chr17 43107147 43107462 316 - 0 GT AG 0 0 ,67532:1 1 1 1.000 1.000 4 TCGA:I 14772278 chr17 43107208 43107644 437 + 0 GC AG 0 0 ,66231:1 1 1 1.000 1.000 4 TCGA:I 14772279 chr17 43107208 43434188 326981 + 0 GC AG 0 0 ,60712:1,60788:1,61253:1,63541:1,65773:1,67514:1,67616:1,67832:1,68185:2,68514:1 10 11 1.100 1.000 4 TCGA:I 14772280 chr17 43107341 43107644 304 + 0 GT AG 0 0 ,61562:1,62538:1,65808:1,66420:1 4 4 1.000 1.000 4 TCGA:I 14772281 chr17 43107378 43115725 8348 - 0 GT AG 0 aC19,cG19,cG38,gC19,gC38,kG19,kG38,mG19,mG38,rG19,rG38,sG19,sG38,vG19 ,64238:2,67310:1 2 3 1.500 1.500 4 TCGA:I 14772282 chr17 43107427 43129515 22089 - 0 GC AG 0 0 ,61010:1 1 1 1.000 1.000 4 TCGA:I 14772283 chr17 43107577 43533549 425973 + 0 GC AG 0 0 ,67762:1 1 1 1.000 1.000 4 TCGA:I 14772284 chr17 43107632 43108465 834 + 0 GC AG 0 0 ,63870:1 1 1 1.000 1.000 4 TCGA:I 14772285 chr17 43107632 43121272 13641 + 0 GC AG 0 0 ,63870:1 1 1 1.000 1.000 4 TCGA:I 14772286 chr17 43108055 43108189 135 - 0 AT AC 0 0 ,68660:1 1 1 1.000 1.000 4 TCGA:I 14772287 chr17 43108085 43110326 2242 - 0 GT AG 0 0 ,66157:1,69479:1 2 2 1.000 1.000 4 TCGA:I 14772288 chr17 43108085 43231018 122934 - 0 GT AG 0 0 ,67880:1 1 1 1.000 1.000 4 TCGA:I 14772289 chr17 43108111 43308237 200127 + 0 GT AG 0 0 ,59907:1,60410:1,66381:1,67666:1,68573:1,69894:1 6 6 1.000 1.000 4 TCGA:I 14772290 chr17 43108125 43108489 365 + 0 GC AG 0 0 ,69096:1 1 1 1.000 1.000 4 TCGA:I 14772291 chr17 43108197 43108563 367 + 0 GT AG 0 0 ,62579:1 1 1 1.000 1.000 4 TCGA:I 14772292 chr17 43108199 43110446 2248 - 0 AT AC 0 0 ,64519:1 1 1 1.000 1.000 4 TCGA:I 14772293 chr17 43108213 43108867 655 - 0 GC AG 0 0 ,69537:1 1 1 1.000 1.000 4 TCGA:I 14772294 chr17 43108236 43108465 230 + 0 GC AG 0 0 ,66957:1 1 1 1.000 1.000 4 TCGA:I 14772295 chr17 43108236 43108602 367 + 0 GC AG 0 0 ,64239:1,68134:1,68601:1,68891:1 4 4 1.000 1.000 4 TCGA:I 14772296 chr17 43108236 43108890 655 + 0 GC AG 0 0 ,62270:1,66957:1 2 2 1.000 1.000 4 TCGA:I 14772297 chr17 43108236 43110515 2280 + 0 GC AG 0 0 ,63436:1 1 1 1.000 1.000 4 TCGA:I 14772298 chr17 43108237 43110508 2272 - 0 GC AG 0 0 ,70937:1 1 1 1.000 1.000 4 TCGA:I 14772299 chr17 43108242 43108608 367 + 0 GC AG 0 0 ,64239:1,68134:1,68601:1 3 3 1.000 1.000 4 TCGA:I 14772300 chr17 43108242 43108896 655 + 0 GC AG 0 0 ,66957:1 1 1 1.000 1.000 4 TCGA:I 14772301 chr17 43108466 43110863 2398 + 0 GC AG 0 0 ,68368:1 1 1 1.000 1.000 4 TCGA:I 14772302 chr17 43108472 43108896 425 + 0 GC AG 0 0 ,69800:1 1 1 1.000 1.000 4 TCGA:I 14772303 chr17 43108472 43110869 2398 + 0 GC AG 0 0 ,68368:1 1 1 1.000 1.000 4 TCGA:I 14772304 chr17 43108476 43108900 425 + 0 GC AG 0 0 ,66957:1,69800:1 2 2 1.000 1.000 4 TCGA:I 14772305 chr17 43108476 43121282 12807 + 0 GC AG 0 0 ,63870:1 1 1 1.000 1.000 4 TCGA:I 14772306 chr17 43108490 43108779 290 + 0 GC AG 0 0 ,68595:1 1 1 1.000 1.000 4 TCGA:I 14772307 chr17 43108510 43108965 456 - 0 GC AG 0 0 ,70068:1 1 1 1.000 1.000 4 TCGA:I 14772308 chr17 43108510 43370743 262234 - 0 GC AG 0 0 ,63312:1,64696:1 2 2 1.000 1.000 4 TCGA:I 14772309 chr17 43108519 43110401 1883 + 0 AT AC 0 0 ,66464:1 1 1 1.000 1.000 4 TCGA:I 14772310 chr17 43108603 43108777 175 + 0 GC AG 0 0 ,64342:1 1 1 1.000 1.000 4 TCGA:I 14772311 chr17 43108603 43108890 288 + 0 GC AG 0 0 ,60064:1,61176:1 2 2 1.000 1.000 4 TCGA:I 14772312 chr17 43108609 43108896 288 + 0 GC AG 0 0 ,60064:1,64710:2 2 3 1.500 1.500 4 TCGA:I 14772313 chr17 43108611 43110032 1422 + 0 AT AC 0 0 ,68565:2 1 2 2.000 2.000 4 TCGA:I 14772314 chr17 43108642 43113461 4820 + 0 GT AG 0 0 ,68413:2 1 2 2.000 2.000 4 TCGA:I 14772315 chr17 43108642 43520759 412118 + 0 GT AG 0 0 ,69668:1 1 1 1.000 1.000 4 TCGA:I 14772316 chr17 43109038 43109057 20 + 0 AT AC 0 0 ,68177:1 1 1 1.000 1.000 4 TCGA:I 14772317 chr17 43109091 43109227 137 - 0 GT AG 0 0 ,60924:1,61729:2,62020:1,63128:1,68528:1,68855:1,69521:2 7 9 1.286 1.000 4 TCGA:I 14772318 chr17 43109275 43110171 897 + 0 GC AG 0 0 ,63068:1,65537:1,66464:1 3 3 1.000 1.000 4 TCGA:I 14772319 chr17 43109275 43112363 3089 + 0 GC AG 0 0 ,65808:1 1 1 1.000 1.000 4 TCGA:I 14772320 chr17 43109296 43553036 443741 - 0 GC AG 0 0 ,70258:1 1 1 1.000 1.000 4 TCGA:I 14772321 chr17 43109940 43112593 2654 + 0 GC AG 0 0 ,63133:1 1 1 1.000 1.000 4 TCGA:I 14772322 chr17 43110054 43269859 159806 - 0 GC AG 0 0 ,61848:1,62113:2,63892:1,65593:2,66497:1,66671:1,69749:2 7 10 1.429 1.000 4 TCGA:I 14772323 chr17 43110143 43419823 309681 - 0 GC AG 0 0 ,60904:1,61050:2,62919:1,63003:1,63690:2,63998:1,64283:1,64386:1,64630:1,64967:1,65252:1,65789:1,65839:1,65845:1,67480:1,67989:1,68266:1,69014:2,69164:1,69182:1,69270:1,69484:1,69706:1,70001:1,70051:1,70297:2,70322:1,70536:1,70594:1,70626:1 30 34 1.133 1.000 4 TCGA:I 14772324 chr17 43110149 43419829 309681 - 0 GC AG 0 0 ,60904:1,61050:2,62919:1,63003:1,63690:2,63998:1,64283:1,64386:1,64630:1,64967:1,65252:1,65789:1,65839:1,65845:1,67480:1,67989:1,68266:1,69014:2,69164:1,69182:1,69270:1,69484:1,69706:1,70001:1,70051:1,70297:2,70322:1,70536:1,70594:1,70626:1 30 34 1.133 1.000 4 TCGA:I 14772325 chr17 43110149 43501742 391594 - 0 GC AG 0 0 ,62156:1,69058:1 2 2 1.000 1.000 4 TCGA:I 14772326 chr17 43110157 43182483 72327 + 0 GT AG 0 0 ,70413:1 1 1 1.000 1.000 4 TCGA:I 14772327 chr17 43110172 43182498 72327 + 0 GC AG 0 0 ,70413:1 1 1 1.000 1.000 4 TCGA:I 14772328 chr17 43110211 43115725 5515 - 0 GT AG 0 aC19,cG19,cG38,gC19,gC38,kG19,kG38,mG19,mG38,rG19,rG38,sG19,sG38,vG19 ,60867:1,66713:1 2 2 1.000 1.000 4 TCGA:I 14772329 chr17 43110327 43111259 933 - 0 GC AG 0 0 ,59764:1 1 1 1.000 1.000 4 TCGA:I 14772330 chr17 43110350 43127787 17438 + 0 GC AG 0 0 ,60811:1 1 1 1.000 1.000 4 TCGA:I 14772331 chr17 43110352 43127789 17438 - 0 GC AG 0 0 ,60811:1 1 1 1.000 1.000 4 TCGA:I 14772332 chr17 43110356 43127793 17438 + 0 GT AG 0 0 ,60811:1 1 1 1.000 1.000 4 TCGA:I 14772333 chr17 43110581 43111394 814 - 0 GC AG aC19,gC19,gC38,kG19,kG38,sG19,sG38,vG19 0 ,59908:1 1 1 1.000 1.000 4 TCGA:I 14772334 chr17 43110581 43112486 1906 - 0 GT AG aC19,gC19,gC38,kG19,kG38,sG19,sG38,vG19 0 ,71103:1 1 1 1.000 1.000 4 TCGA:I 14772335 chr17 43110581 43115725 5145 - 1 GT AG aC19,gC19,gC38,kG19,kG38,sG19,sG38,vG19 aC19,cG19,cG38,gC19,gC38,kG19,kG38,mG19,mG38,rG19,rG38,sG19,sG38,vG19 ,59781:1,59785:1,59789:2,59827:2,59836:1,59839:1,59896:1,59920:1,59935:1,59958:1,59972:1,59975:1,59986:1,59995:2,60008:1,60011:1,60025:1,60073:1,60087:1,60109:1,60120:2,60123:1,60155:1,60164:1,60244:1,60245:1,60258:1,60291:2,60352:1,60378:1,60386:2,60394:1,60398:1,60428:1,60493:1,60511:1,60526:1,60564:1,60568:1,60571:1,60620:3,60635:1,60641:1,60660:1,60670:3,60683:1,60720:1,60737:3,60763:1,60771:1,60777:1,60828:3,60869:4,60893:1,60912:1,60930:1,60955:1,60958:4,61019:1,61023:1,61030:3,61039:1,61078:2,61085:1,61089:1,61096:3,61099:1,61111:2,61113:1,61154:1,61157:2,61160:2,61174:1,61195:1,61240:1,61248:1,61250:1,61273:1,61275:1,61276:1,61314:1,61318:1,61336:1,61352:1,61360:2,61375:1,61379:1,61383:1,61404:2,61413:1,61426:1,61442:1,61448:2,61464:2,61484:1,61495:1,61499:1,61518:2,61533:2,61545:1,61583:1,61616:1,61639:1,61642:1,61648:1,61657:1,61693:2,61696:1,61761:1,61765:1,61792:2,61869:2,61877:1,61983:1,62005:1,62006:1,62016:1,62039:1,62110:1,62125:1,62129:1,62136:1,62187:1,62197:1,62203:1,62220:1,62264:2,62296:1,62330:4,62379:1,62401:1,62405:1,62458:2,62512:1,62516:1,62549:1,62555:1,62556:1,62558:2,62562:3,62590:1,62591:1,62603:1,62623:1,62627:1,62630:1,62649:1,62658:3,62663:3,62670:1,62688:2,62843:1,62854:1,62865:1,62880:1,62881:1,62888:1,62909:1,62914:2,62929:1,62938:1,62943:1,63015:1,63025:1,63128:1,63161:1,63208:2,63218:1,63240:1,63241:2,63278:1,63294:1,63296:1,63340:1,63350:1,63377:1,63379:1,63383:1,63416:1,63421:2,63436:1,63442:1,63455:1,63517:1,63524:2,63594:1,63599:1,63606:2,63619:2,63622:1,63629:1,63644:1,63647:2,63671:1,63684:2,63706:2,63715:2,63717:1,63719:1,63768:1,63797:2,63816:1,63850:2,63851:1,63880:1,63896:1,63900:1,63902:1,63974:1,63994:1,64032:2,64038:1,64043:1,64058:1,64083:1,64094:1,64095:1,64128:1,64209:1,64236:1,64238:2,64265:1,64369:1,64398:1,64433:1,64511:1,64525:1,64528:1,64541:1,64561:1,64576:1,64620:1,64687:1,64710:1,64713:4,64717:1,64773:1,64795:1,64809:1,64830:1,64837:1,64848:1,64850:1,64885:1,64910:1,64916:1,64918:1,64953:1,64960:1,64976:1,64989:1,65021:3,65163:1,65173:2,65214:2,65282:1,65290:1,65317:1,65337:1,65362:1,65373:1,65400:1,65442:1,65458:1,65490:1,65537:2,65571:1,65591:1,65602:1,65613:2,65661:2,65670:2,65686:2,65692:1,65704:1,65756:1,65765:1,65784:1,65792:1,65801:1,65802:1,65817:1,65859:1,65895:1,65903:1,65918:1,65955:1,65958:1,65979:1,65994:2,66014:1,66018:1,66053:1,66081:1,66087:1,66113:1,66114:1,66147:1,66175:1,66233:1,66242:1,66251:2,66254:2,66255:3,66269:1,66314:1,66316:2,66334:1,66341:1,66376:1,66398:1,66407:1,66430:1,66464:2,66473:3,66485:1,66558:1,66619:1,66631:1,66632:1,66646:1,66660:1,66730:1,66760:1,66780:2,66795:2,66821:1,66822:1,66831:1,66834:2,66839:1,66868:1,66870:1,66884:1,66890:1,66959:3,66998:1,67022:2,67063:2,67094:1,67155:2,67223:2,67247:1,67264:1,67265:2,67279:2,67301:1,67315:1,67346:2,67347:1,67372:1,67384:1,67410:1,67423:1,67451:1,67471:1,67497:1,67540:1,67550:2,67592:1,67607:1,67611:1,67614:1,67641:1,67672:1,67724:1,67725:1,67726:1,67737:1,67742:2,67750:1,67791:4,67795:1,67799:1,67820:1,67933:1,67939:2,67949:1,67969:1,68005:1,68015:1,68102:1,68136:1,68156:2,68168:2,68170:1,68175:1,68319:1,68330:1,68347:1,68374:1,68409:1,68419:1,68427:1,68453:1,68470:2,68513:1,68530:1,68542:2,68546:1,68549:1,68600:1,68609:1,68615:2,68621:1,68632:3,68643:3,68694:1,68748:1,68754:1,68775:1,68803:1,68841:1,68891:1,68909:1,68910:2,68949:1,69025:2,69032:1,69067:1,69115:1,69137:1,69160:6,69197:1,69292:1,69302:1,69321:1,69347:1,69387:1,69420:1,69487:2,69537:1,69559:1,69572:1,69589:1,69607:1,69609:1,69627:1,69642:1,69653:1,69666:1,69671:1,69699:1,69700:1,69741:2,69742:1,69822:1,69902:1,69948:1,69962:2,69964:2,69979:1,69998:1,70023:1,70036:2,70048:1,70059:1,70060:1,70099:1,70120:1,70152:1,70175:2,70195:3,70200:1,70224:1,70265:5,70277:1,70310:1,70324:1,70351:4,70370:1,70375:2,70384:1,70385:1,70386:1,70405:1,70441:1,70470:1,70510:1,70553:3,70596:2,70607:2,70638:1,70704:1,70710:1,70717:1,70733:1,70737:1,70739:1,70751:4,70757:1,70759:4,70760:1,70842:1,70872:1,70876:2,70884:1,70894:1,70901:1,70972:1,70993:1,70998:1,71059:1,71073:1 504 651 1.292 1.000 4 TCGA:I 14772336 chr17 43110581 43124016 13436 - 0 GT AG aC19,gC19,gC38,kG19,kG38,sG19,sG38,vG19 aC19,cG19,cG38,gC19,gC38,kG19,kG38,mG19,mG38,rG19,rG38,sG19,sG38,vG19 ,61312:1,62548:1,69902:1 3 3 1.000 1.000 4 TCGA:I 14772337 chr17 43110581 43125270 14690 - 0 GT AG aC19,gC19,gC38,kG19,kG38,sG19,sG38,vG19 aC19,gC19,gC38,kG19,kG38,mG19,mG38,rG19,rG38,sG19,vG19 ,70857:1 1 1 1.000 1.000 4 TCGA:I 14772338 chr17 43110581 43125276 14696 - 1 GT AG aC19,gC19,gC38,kG19,kG38,sG19,sG38,vG19 aC19,gC19,gC38,kG19,kG38,rG19,rG38,sG38,vG19 ,64525:1,66781:1 2 2 1.000 1.000 4 TCGA:I 14772339 chr17 43110585 43115725 5141 - 0 GT AG 0 aC19,cG19,cG38,gC19,gC38,kG19,kG38,mG19,mG38,rG19,rG38,sG19,sG38,vG19 ,60063:1,60158:1,60373:1,60586:1,60702:1,61033:1,61583:1,61586:1,62717:1,63223:1,63380:1,63576:1,64058:1,64459:1,64590:2,64745:1,64970:1,66866:1,66961:1,67811:1,70064:1,70364:1,70543:1,70655:1,70733:1 25 26 1.040 1.000 4 TCGA:I 14772340 chr17 43110704 43111248 545 + 0 GT AG 0 0 ,64099:3 1 3 3.000 3.000 4 TCGA:I 14772341 chr17 43110715 43110840 126 - 0 GC AG 0 0 ,69798:1 1 1 1.000 1.000 4 TCGA:I 14772342 chr17 43110715 43110975 261 - 0 GC AG 0 0 ,60559:1,69026:1 2 2 1.000 1.000 4 TCGA:I 14772343 chr17 43110715 43111259 545 - 0 GC AG 0 0 ,64099:2,67130:1 2 3 1.500 1.500 4 TCGA:I 14772344 chr17 43110837 43111390 554 + 0 AT AC 0 0 ,64032:1 1 1 1.000 1.000 4 TCGA:I 14772345 chr17 43110841 43110975 135 - 0 GC AG 0 0 ,68896:1 1 1 1.000 1.000 4 TCGA:I 14772346 chr17 43110841 43111394 554 - 0 GC AG 0 0 ,64032:1 1 1 1.000 1.000 4 TCGA:I 14772347 chr17 43110852 43117328 6477 + 0 GC AG 0 0 ,69116:1 1 1 1.000 1.000 4 TCGA:I 14772348 chr17 43110870 43111288 419 + 0 GT AG 0 0 ,62141:1,62304:1,64417:1,66572:1 4 4 1.000 1.000 4 TCGA:I 14772349 chr17 43110870 43111590 721 + 0 GT AG 0 0 ,68269:1 1 1 1.000 1.000 4 TCGA:I 14772350 chr17 43110870 43120534 9665 + 0 GT AG 0 0 ,68040:1 1 1 1.000 1.000 4 TCGA:I 14772351 chr17 43110883 43111603 721 - 0 GT AG 0 0 ,60571:1 1 1 1.000 1.000 4 TCGA:I 14772352 chr17 43110888 43111306 419 + 0 GT AG 0 0 ,66923:1 1 1 1.000 1.000 4 TCGA:I 14772353 chr17 43111005 43111288 284 + 0 GC AG 0 0 ,59995:1,67872:1,70579:1,70968:1 4 4 1.000 1.000 4 TCGA:I 14772354 chr17 43111005 43111423 419 + 0 GC AG 0 0 ,67497:1 1 1 1.000 1.000 4 TCGA:I 14772355 chr17 43111038 43111758 721 - 0 GC AG 0 0 ,60292:1,60329:1,60377:2,60594:1,60626:1,60767:1,61460:1,62348:1,62754:2,63248:1,63375:2,63606:1,63997:1,64129:2,64325:1,64463:1,64640:1,64647:1,64808:2,64985:1,65014:2,65317:1,65432:2,65879:1,65888:1,66034:3,66081:1,66282:1,66691:1,66851:1,66973:2,67273:1,67415:3,67418:1,67672:1,67786:1,68234:1,68276:1,68468:1,68579:1,68655:1,68663:1,68752:2,68764:1,68875:1,68957:1,69215:1,69449:2,69476:1,69478:2,69783:1,69834:2,69957:2,70472:1,70517:1,70546:1,70567:1,70635:1,70662:1,70699:1,70721:1,70745:1,70787:1,70997:1,71029:1,71106:1 66 83 1.258 1.000 4 TCGA:I 14772356 chr17 43111260 43117316 6057 - 0 GC AG 0 0 ,65302:1 1 1 1.000 1.000 4 TCGA:I 14772357 chr17 43111302 43113047 1746 - 0 GT AG 0 0 ,61096:1,61835:1 2 2 1.000 1.000 4 TCGA:I 14772358 chr17 43111327 43124988 13662 - 0 GC AG 0 0 ,70048:1 1 1 1.000 1.000 4 TCGA:I 14772359 chr17 43111336 43111635 300 + 0 AT AC 0 0 ,68999:1 1 1 1.000 1.000 4 TCGA:I 14772360 chr17 43111370 43111665 296 + 0 AT AC 0 0 ,66497:1 1 1 1.000 1.000 4 TCGA:I 14772361 chr17 43111456 43111620 165 + 0 GT AG 0 0 ,63050:1 1 1 1.000 1.000 4 TCGA:I 14772362 chr17 43111456 43111757 302 + 0 GT AG 0 0 ,71089:1 1 1 1.000 1.000 4 TCGA:I 14772363 chr17 43111456 43488213 376758 + 0 GT AG 0 0 ,64361:1,67254:1 2 2 1.000 1.000 4 TCGA:I 14772364 chr17 43111456 43594854 483399 + 0 GT AG 0 0 ,60147:1,60461:1,60876:1,61464:1,63014:1,63476:1,64123:2,65053:1,66213:1,66298:1,66781:2,67401:1,67717:1,68114:1,69979:1,70124:1,70384:1 17 19 1.118 1.000 4 TCGA:I 14772365 chr17 43111591 43112363 773 + 0 GC AG 0 0 ,60181:1 1 1 1.000 1.000 4 TCGA:I 14772366 chr17 43111795 43111893 99 - 0 GC AG 0 0 ,70807:1 1 1 1.000 1.000 4 TCGA:I 14772367 chr17 43111795 43112582 788 - 0 GC AG 0 0 ,66464:1 1 1 1.000 1.000 4 TCGA:I 14772368 chr17 43111795 43567651 455857 - 0 GC AG 0 0 ,59823:2,62230:1,64260:1,65985:1,65994:1,67156:1,67817:1 7 8 1.143 1.000 4 TCGA:I 14772369 chr17 43111799 43439836 328038 + 0 GC AG 0 0 ,67016:1,71001:2 2 3 1.500 1.500 4 TCGA:I 14772370 chr17 43112185 43112898 714 + 0 GT AG 0 0 ,65040:1 1 1 1.000 1.000 4 TCGA:I 14772371 chr17 43112204 43112248 45 - 0 GT AG 0 0 ,63133:1 1 1 1.000 1.000 4 TCGA:I 14772372 chr17 43112204 43162629 50426 - 0 GT AG 0 aC19,kG19 ,70221:1 1 1 1.000 1.000 4 TCGA:I 14772373 chr17 43112233 43112498 266 + 0 GC AG 0 0 ,59877:1,70145:2 2 3 1.500 1.500 4 TCGA:I 14772374 chr17 43112300 43112582 283 - 0 GC AG 0 0 ,66317:2 1 2 2.000 2.000 4 TCGA:I 14772375 chr17 43112319 43113033 715 - 0 GT AG 0 0 ,62467:1,63738:1 2 2 1.000 1.000 4 TCGA:I 14772376 chr17 43112322 43113038 717 + 0 GT AG 0 0 ,66149:1 1 1 1.000 1.000 4 TCGA:I 14772377 chr17 43112364 43113080 717 + 0 GC AG 0 0 ,60387:1,60581:1,61509:2,63118:1,64740:1,66268:1,70067:1 7 8 1.143 1.000 4 TCGA:I 14772378 chr17 43112444 43113119 676 - 0 GT AG 0 0 ,70101:1 1 1 1.000 1.000 4 TCGA:I 14772379 chr17 43112546 43112861 316 - 0 AT AC 0 0 ,66135:1 1 1 1.000 1.000 4 TCGA:I 14772380 chr17 43112603 43115725 3123 - 0 GT AG 0 aC19,cG19,cG38,gC19,gC38,kG19,kG38,mG19,mG38,rG19,rG38,sG19,sG38,vG19 ,60073:1,60483:2,60664:1,60690:1,61543:1,61573:1,61806:1,62193:1,62425:1,62603:1,62688:1,63003:2,63027:1,63209:1,63375:1,63379:1,63807:1,64175:1,64274:1,65234:1,65420:1,66365:1,66455:3,67279:1,67695:2,67781:1,67785:1,68028:1,68226:1,68540:2,68652:1,68712:1,68910:1,69010:1,69719:1,69932:1,70060:1,70088:1,70149:1,70295:1,70327:1,70529:1,70615:1,70783:2 44 51 1.159 1.000 4 TCGA:I 14772381 chr17 43112607 43115725 3119 - 0 GT AG 0 aC19,cG19,cG38,gC19,gC38,kG19,kG38,mG19,mG38,rG19,rG38,sG19,sG38,vG19 ,59873:2,65571:1 2 3 1.500 1.500 4 TCGA:I 14772382 chr17 43112628 43112659 32 + 0 AT AC 0 0 ,61591:2 1 2 2.000 2.000 4 TCGA:I 14772383 chr17 43112722 43112736 15 - 0 GC AG 0 0 ,65567:1,66152:1,68663:1 3 3 1.000 1.000 4 TCGA:I 14772384 chr17 43112849 43113411 563 + 0 GC AG 0 0 ,59935:1 1 1 1.000 1.000 4 TCGA:I 14772385 chr17 43112849 43114428 1580 + 0 GC AG 0 0 ,59843:2,60653:1,62702:1,63498:1 4 5 1.250 1.000 4 TCGA:I 14772386 chr17 43112849 43450365 337517 + 0 GC AG 0 0 ,70849:1 1 1 1.000 1.000 4 TCGA:I 14772387 chr17 43112892 43112923 32 - 0 GC AG 0 0 ,68700:1 1 1 1.000 1.000 4 TCGA:I 14772388 chr17 43112899 43113461 563 + 0 GT AG 0 0 ,64334:1 1 1 1.000 1.000 4 TCGA:I 14772389 chr17 43112918 43113145 228 - 0 GT AG 0 0 ,67185:1 1 1 1.000 1.000 4 TCGA:I 14772390 chr17 43112947 43113080 134 + 0 GC AG 0 0 ,60271:1 1 1 1.000 1.000 4 TCGA:I 14772391 chr17 43112947 43113388 442 + 0 GC AG 0 0 ,70542:1 1 1 1.000 1.000 4 TCGA:I 14772392 chr17 43113014 43113411 398 + 0 GC AG 0 0 ,67988:1 1 1 1.000 1.000 4 TCGA:I 14772393 chr17 43113068 43113845 778 + 0 GC AG 0 0 ,68805:4 1 4 4.000 4.000 4 TCGA:I 14772394 chr17 43113412 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163 200 1.227 1.000 4 TCGA:I 14772433 chr17 43115780 43125276 9497 - 0 GT AG aC19,cG19,cG38,gC19,gC38,kG19,kG38,mG19,mG38,rG19,rG38,sG19,sG38,vG19 aC19,gC19,gC38,kG19,kG38,rG19,rG38,sG38,vG19 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187 224 1.198 1.000 4 TCGA:I 14772434 chr17 43115780 43148321 32542 - 0 GT AG aC19,cG19,cG38,gC19,gC38,kG19,kG38,mG19,mG38,rG19,rG38,sG19,sG38,vG19 0 ,62694:1 1 1 1.000 1.000 4 TCGA:I 14772435 chr17 43115780 43158975 43196 - 0 GT AG aC19,cG19,cG38,gC19,gC38,kG19,kG38,mG19,mG38,rG19,rG38,sG19,sG38,vG19 0 ,66157:3 1 3 3.000 3.000 4 TCGA:I 14772436 chr17 43115780 43166979 51200 - 0 GT AG aC19,cG19,cG38,gC19,gC38,kG19,kG38,mG19,mG38,rG19,rG38,sG19,sG38,vG19 aC19,gC19,gC38,kG19,kG38,sG19,sG38 ,66472:1,68534:1 2 2 1.000 1.000 4 TCGA:I 14772437 chr17 43115780 43168169 52390 - 0 GT AG aC19,cG19,cG38,gC19,gC38,kG19,kG38,mG19,mG38,rG19,rG38,sG19,sG38,vG19 0 ,62934:1,63305:1,64380:1,68026:1,69773:1,70121:1 6 6 1.000 1.000 4 TCGA:I 14772438 chr17 43115780 43170125 54346 - 1 GT AG aC19,cG19,cG38,gC19,gC38,kG19,kG38,mG19,mG38,rG19,rG38,sG19,sG38,vG19 aC19,gC19,gC38,kG19,kG38,rG19,rG38,sG19,sG38 ,60058:2,60077:1,60218:1,60860:1,61265:1,62006:1,62284:1,62285:1,62905:1,63271:1,63692:1,64912:1,65104:2,65539:1,65972:1,65976:1,66036:2,66041:1,66047:1,66367:1,66669:1,67042:1,67148:1,67289:1,67557:1,68676:1,68791:1,68889:1,69572:1,69667:1,69733:1,69905:1,70558:1,70705:3,70780:1 35 40 1.143 1.000 4 TCGA:I 14772439 chr17 43115780 43170880 55101 - 0 GT AG aC19,cG19,cG38,gC19,gC38,kG19,kG38,mG19,mG38,rG19,rG38,sG19,sG38,vG19 aC19,sG19,sG38 ,69145:1 1 1 1.000 1.000 4 TCGA:I 14772440 chr17 43115783 43124019 8237 + 0 GC AG 0 0 ,60086:1,60611:1,62264:1,62342:1,63157:1,63838:1,64018:1,65880:1,66020:1,66034:1,66494:1,66533:1,67441:1,67608:1,67663:1 15 15 1.000 1.000 4 TCGA:I 14772441 chr17 43115844 43124016 8173 - 0 GT AG 0 aC19,cG19,cG38,gC19,gC38,kG19,kG38,mG19,mG38,rG19,rG38,sG19,sG38,vG19 ,68621:1 1 1 1.000 1.000 4 TCGA:I 14772442 chr17 43116215 43145738 29524 - 0 GC AG 0 0 ,68212:1 1 1 1.000 1.000 4 TCGA:I 14772443 chr17 43116411 43117460 1050 + 0 GC AG 0 0 ,63921:2 1 2 2.000 2.000 4 TCGA:I 14772444 chr17 43116411 43613136 496726 + 0 GC AG 0 0 ,63108:1 1 1 1.000 1.000 4 TCGA:I 14772445 chr17 43116433 43613158 496726 + 0 AT AC 0 0 ,63108:1 1 1 1.000 1.000 4 TCGA:I 14772446 chr17 43116457 43117469 1013 - 0 GT AG 0 0 ,62721:1 1 1 1.000 1.000 4 TCGA:I 14772447 chr17 43116494 43119031 2538 + 0 GC AG 0 0 ,63187:1 1 1 1.000 1.000 4 TCGA:I 14772448 chr17 43116494 43416245 299752 + 0 GC AG 0 0 ,68484:1 1 1 1.000 1.000 4 TCGA:I 14772449 chr17 43116585 43117720 1136 - 0 GT AG 0 0 ,61652:1 1 1 1.000 1.000 4 TCGA:I 14772450 chr17 43116590 43120721 4132 - 0 GC AG 0 0 ,67155:1 1 1 1.000 1.000 4 TCGA:I 14772451 chr17 43116662 43116796 135 + 0 GC AG 0 0 ,62661:1 1 1 1.000 1.000 4 TCGA:I 14772452 chr17 43116730 43408946 292217 + 0 GC AG 0 0 ,65950:1 1 1 1.000 1.000 4 TCGA:I 14772453 chr17 43116731 43117564 834 - 0 GT AG 0 0 ,61096:1 1 1 1.000 1.000 4 TCGA:I 14772454 chr17 43116750 43124976 8227 - 0 GT AG 0 0 ,62346:1 1 1 1.000 1.000 4 TCGA:I 14772455 chr17 43116864 43116912 49 - 0 AT AC 0 0 ,61451:5 1 5 5.000 5.000 4 TCGA:I 14772456 chr17 43116885 43117296 412 + 0 GT AG 0 0 ,68354:1 1 1 1.000 1.000 4 TCGA:I 14772457 chr17 43116948 43153199 36252 + 0 GT AG 0 0 ,63357:1,65619:1,65987:1,67109:1,68065:1 5 5 1.000 1.000 4 TCGA:I 14772458 chr17 43117077 43117823 747 + 0 GC AG 0 0 ,62521:1 1 1 1.000 1.000 4 TCGA:I 14772459 chr17 43117122 43153866 36745 + 0 GT AG 0 0 ,59761:1,59942:1,60128:3,60180:1,60313:1,60465:1,60932:1,61039:2,61367:1,61464:1,61562:1,61687:1,62002:1,62200:1,62322:1,62579:2,62680:1,62856:1,63010:1,63189:1,63241:1,63370:1,63476:1,63668:1,63742:1,63826:1,63852:1,63982:2,64048:1,64202:1,64219:1,64377:1,64423:1,64514:1,64612:1,64830:1,64958:1,64986:1,64990:1,65057:1,65517:1,65585:1,65598:2,65772:2,65794:1,66369:1,66525:1,66547:1,66589:1,67011:1,67067:1,67072:1,67090:1,67179:1,67240:1,67431:1,67438:1,67762:1,67833:2,68063:1,68091:2,68207:1,68865:1,68948:1,69454:1,69473:2,69589:1,69612:1,69956:1,70055:1,70190:1,70399:1,70509:1,70823:1,70848:1,70881:2,70915:1,70970:1 78 89 1.141 1.000 4 TCGA:I 14772460 chr17 43117161 43153905 36745 + 0 GC AG 0 0 ,60244:1,65285:1 2 2 1.000 1.000 4 TCGA:I 14772461 chr17 43117175 43123646 6472 - 0 GC AG 0 0 ,64152:1 1 1 1.000 1.000 4 TCGA:I 14772462 chr17 43117182 43117481 300 - 0 GC AG 0 0 ,65745:1 1 1 1.000 1.000 4 TCGA:I 14772463 chr17 43117182 43117613 432 - 0 GC AG 0 0 ,69759:1 1 1 1.000 1.000 4 TCGA:I 14772464 chr17 43117196 43117494 299 - 0 GC AG 0 0 ,62834:1 1 1 1.000 1.000 4 TCGA:I 14772465 chr17 43117205 43117503 299 + 0 GC AG 0 0 ,60161:1,61618:1,69978:1 3 3 1.000 1.000 4 TCGA:I 14772466 chr17 43117205 43117636 432 + 0 GC AG 0 0 ,62400:1 1 1 1.000 1.000 4 TCGA:I 14772467 chr17 43117211 43117509 299 + 0 GT AG 0 0 ,61618:1,62580:1,68801:1 3 3 1.000 1.000 4 TCGA:I 14772468 chr17 43117211 43117642 432 + 0 GT AG 0 0 ,69479:1 1 1 1.000 1.000 4 TCGA:I 14772469 chr17 43117258 43154002 36745 + 0 AT AC 0 0 ,59842:1,60055:1,60280:1,60670:1,61189:1,61420:1,61657:1,62309:1,62351:2,62609:1,62846:1,63994:1,64106:1,65707:1,66113:1,66440:1,66729:1,66736:2,66961:1,66989:1,67082:2,67085:1,67155:1,67763:2,67867:1,67903:1,68212:1,68818:1,69221:1,69356:1,69693:1,69927:1,70047:1,70224:1,70267:2,70845:1,70846:1,70885:1 38 43 1.132 1.000 4 TCGA:I 14772470 chr17 43117303 43123134 5832 + 0 GT AG 0 0 ,67808:1 1 1 1.000 1.000 4 TCGA:I 14772471 chr17 43117317 43117613 297 - 0 GC AG 0 0 ,61216:1,68654:1,69762:2 3 4 1.333 1.000 4 TCGA:I 14772472 chr17 43117317 43367371 250055 - 0 GC AG 0 0 ,61564:1,64193:1,69559:1,70378:1 4 4 1.000 1.000 4 TCGA:I 14772473 chr17 43117372 43154115 36744 + 0 GT AG 0 0 ,62314:2,63383:1,66787:1,68256:1,69229:1,69978:1 6 7 1.167 1.000 4 TCGA:I 14772474 chr17 43117378 43154121 36744 + 0 GT AG 0 0 ,62314:2,63383:1,66787:1,68256:1,69229:1,69978:1 6 7 1.167 1.000 4 TCGA:I 14772475 chr17 43117417 43117711 295 - 0 GT AG 0 0 ,62702:1,70739:1 2 2 1.000 1.000 4 TCGA:I 14772476 chr17 43117417 43121347 3931 - 0 GC AG 0 0 ,66334:1 1 1 1.000 1.000 4 TCGA:I 14772477 chr17 43117421 43121351 3931 + 0 GT AG 0 0 ,66334:1 1 1 1.000 1.000 4 TCGA:I 14772478 chr17 43117461 43154204 36744 + 0 GC AG 0 0 ,70528:1 1 1 1.000 1.000 4 TCGA:I 14772479 chr17 43117504 43117636 133 + 0 GC AG 0 0 ,66736:1 1 1 1.000 1.000 4 TCGA:I 14772480 chr17 43117610 43154354 36745 + 0 GC AG 0 0 ,61626:1 1 1 1.000 1.000 4 TCGA:I 14772481 chr17 43117614 43185575 67962 - 0 GC AG 0 0 ,67712:1 1 1 1.000 1.000 4 TCGA:I 14772482 chr17 43117919 43154585 36667 - 0 AT AC 0 0 ,63241:1 1 1 1.000 1.000 4 TCGA:I 14772483 chr17 43117941 43154748 36808 - 0 GT AG 0 0 ,64360:1 1 1 1.000 1.000 4 TCGA:I 14772484 chr17 43118038 43118114 77 + 0 GT AG 0 0 ,68703:3 1 3 3.000 3.000 4 TCGA:I 14772485 chr17 43118038 43118950 913 + 0 GT AG 0 0 ,66166:1 1 1 1.000 1.000 4 TCGA:I 14772486 chr17 43118104 43154900 36797 + 0 GT AG 0 0 ,60524:1 1 1 1.000 1.000 4 TCGA:I 14772487 chr17 43118115 43154911 36797 + 0 GT AG 0 0 ,60524:1 1 1 1.000 1.000 4 TCGA:I 14772488 chr17 43118204 43155000 36797 + 0 GC AG 0 0 ,59864:1,69964:1 2 2 1.000 1.000 4 TCGA:I 14772489 chr17 43118231 43154954 36724 - 0 AT AC 0 0 ,60406:1 1 1 1.000 1.000 4 TCGA:I 14772490 chr17 43118251 43155000 36750 + 0 GT AG 0 0 ,61652:1 1 1 1.000 1.000 4 TCGA:I 14772491 chr17 43118267 43154937 36671 - 0 AT AC 0 0 ,69013:1 1 1 1.000 1.000 4 TCGA:I 14772492 chr17 43118267 43154954 36688 - 0 AT AC 0 0 ,61579:1,68604:1 2 2 1.000 1.000 4 TCGA:I 14772493 chr17 43118317 43154986 36670 + 0 GT AG 0 0 ,62690:1 1 1 1.000 1.000 4 TCGA:I 14772494 chr17 43118405 43121056 2652 - 0 GC AG 0 0 ,64091:1 1 1 1.000 1.000 4 TCGA:I 14772495 chr17 43118413 43118967 555 - 0 AT AC 0 0 ,66524:1 1 1 1.000 1.000 4 TCGA:I 14772496 chr17 43118422 43118808 387 + 0 GC AG 0 0 ,61275:1 1 1 1.000 1.000 4 TCGA:I 14772497 chr17 43118422 43118976 555 + 0 GC AG 0 0 ,63241:1,68089:1,68601:1 3 3 1.000 1.000 4 TCGA:I 14772498 chr17 43118422 43121059 2638 + 0 GC AG 0 0 ,63009:1,65203:2,68660:1,69432:1,70807:1 5 6 1.200 1.000 4 TCGA:I 14772499 chr17 43118422 43121094 2673 + 0 GC AG 0 0 ,59834:1 1 1 1.000 1.000 4 TCGA:I 14772500 chr17 43118454 43155045 36592 - 0 AT AC 0 0 ,67513:1 1 1 1.000 1.000 4 TCGA:I 14772501 chr17 43118459 43155251 36793 - 0 GT AG 0 0 ,61822:1,65114:1,69881:1 3 3 1.000 1.000 4 TCGA:I 14772502 chr17 43118491 43118877 387 - 0 GC AG 0 0 ,70362:1 1 1 1.000 1.000 4 TCGA:I 14772503 chr17 43118491 43119014 524 - 0 GC AG 0 0 ,67038:1 1 1 1.000 1.000 4 TCGA:I 14772504 chr17 43118491 43173401 54911 - 0 GC AG 0 0 ,70537:1 1 1 1.000 1.000 4 TCGA:I 14772505 chr17 43118497 43173407 54911 - 0 GC AG 0 0 ,70537:1 1 1 1.000 1.000 4 TCGA:I 14772506 chr17 43118536 43131942 13407 - 0 GC AG 0 0 ,66570:1 1 1 1.000 1.000 4 TCGA:I 14772507 chr17 43118550 43118891 342 + 0 GT AG 0 0 ,67034:1 1 1 1.000 1.000 4 TCGA:I 14772508 chr17 43118577 43119045 469 + 0 AT AC 0 0 ,62309:1 1 1 1.000 1.000 4 TCGA:I 14772509 chr17 43118663 43156043 37381 - 0 GC AG 0 0 ,67881:1 1 1 1.000 1.000 4 TCGA:I 14772510 chr17 43118682 43121291 2610 - 0 GC AG 0 0 ,60679:1 1 1 1.000 1.000 4 TCGA:I 14772511 chr17 43118700 43121535 2836 - 0 AT AC 0 0 ,71015:1 1 1 1.000 1.000 4 TCGA:I 14772512 chr17 43118715 43119031 317 + 0 GT AG 0 0 ,60614:1,62609:1,63162:1 3 3 1.000 1.000 4 TCGA:I 14772513 chr17 43118715 43119235 521 + 0 GT AG 0 0 ,61022:1 1 1 1.000 1.000 4 TCGA:I 14772514 chr17 43118761 43178365 59605 - 0 GT AG 0 0 ,69678:1 1 1 1.000 1.000 4 TCGA:I 14772515 chr17 43118761 43434043 315283 - 0 GT AG 0 0 ,60244:1,60491:1,60531:1,60592:1,60632:1,60731:1,61563:2,62346:1,62709:2,63184:1,63244:1,63378:1,63604:1,64191:1,64240:1,64419:1,65167:1,65255:1,66232:1,66366:1,66571:1,66835:1,67221:1,67344:1,67490:1,68008:1,68037:1,68428:1,69414:1,69574:1,69629:1,69905:1,69912:1,70399:1,70612:1,70775:1,71022:1 37 39 1.054 1.000 4 TCGA:I 14772516 chr17 43118804 43154154 35351 - 0 GT AG 0 0 ,67727:1 1 1 1.000 1.000 4 TCGA:I 14772517 chr17 43118820 43153024 34205 + 0 GT AG 0 0 ,61839:1 1 1 1.000 1.000 4 TCGA:I 14772518 chr17 43118823 43121360 2538 + 0 GT AG 0 0 ,70607:1 1 1 1.000 1.000 4 TCGA:I 14772519 chr17 43118823 43154469 35647 + 0 GT AG 0 0 ,70124:1 1 1 1.000 1.000 4 TCGA:I 14772520 chr17 43118878 43155283 36406 - 0 GC AG 0 0 ,67206:1 1 1 1.000 1.000 4 TCGA:I 14772521 chr17 43118968 43124947 5980 + 0 AT AC 0 0 ,70124:1 1 1 1.000 1.000 4 TCGA:I 14772522 chr17 43118997 43155765 36769 - 0 GT AG 0 0 ,67894:1 1 1 1.000 1.000 4 TCGA:I 14772523 chr17 43119011 43119120 110 - 0 GT AG 0 0 ,64036:1,66376:2 2 3 1.500 1.500 4 TCGA:I 14772524 chr17 43119032 43119096 65 + 0 GC AG 0 0 ,63880:2 1 2 2.000 2.000 4 TCGA:I 14772525 chr17 43119032 43119235 204 + 0 GC AG 0 0 ,61144:2 1 2 2.000 2.000 4 TCGA:I 14772526 chr17 43119032 43150377 31346 + 0 GC AG 0 0 ,67852:1,69879:1 2 2 1.000 1.000 4 TCGA:I 14772527 chr17 43119032 43226670 107639 + 0 GC AG 0 0 ,63536:1 1 1 1.000 1.000 4 TCGA:I 14772528 chr17 43119187 43154204 35018 + 0 GC AG 0 0 ,66215:1 1 1 1.000 1.000 4 TCGA:I 14772529 chr17 43119192 43154209 35018 + 0 GT AG 0 0 ,66215:1 1 1 1.000 1.000 4 TCGA:I 14772530 chr17 43119246 43121557 2312 - 0 GC AG 0 0 ,61273:1,63769:1,66680:1,68162:1,68775:1,70084:1,70573:1 7 7 1.000 1.000 4 TCGA:I 14772531 chr17 43119246 43229686 110441 - 0 GC AG 0 0 ,70804:1 1 1 1.000 1.000 4 TCGA:I 14772532 chr17 43119246 43230649 111404 - 0 GC AG 0 0 ,61917:2 1 2 2.000 2.000 4 TCGA:I 14772533 chr17 43119264 43121553 2290 + 0 AT AC 0 0 ,70807:1 1 1 1.000 1.000 4 TCGA:I 14772534 chr17 43119266 43121557 2292 - 0 GC AG 0 0 ,59807:2,61022:1,62381:1,63157:1,63811:1,67081:1,67094:1,67218:1,67679:1,68014:1,69902:1 11 12 1.091 1.000 4 TCGA:I 14772535 chr17 43119266 43124016 4751 - 0 GT AG 0 aC19,cG19,cG38,gC19,gC38,kG19,kG38,mG19,mG38,rG19,rG38,sG19,sG38,vG19 ,59808:2,59813:1,59819:2,59852:2,59901:1,59940:1,60177:1,60194:1,60414:2,60447:1,60472:2,60492:1,60540:1,60568:1,60625:1,60668:1,60688:1,60690:1,60761:1,60772:1,60789:1,60824:1,60869:1,60956:1,60990:1,61009:1,61137:1,61189:2,61259:1,61323:1,61334:1,61391:1,61452:1,61830:2,61835:1,61879:1,62010:1,62011:1,62012:2,62113:3,62242:1,62256:1,62292:1,62296:1,62337:1,62509:2,62548:1,62558:1,62562:2,62663:1,62702:1,62742:1,62778:2,62810:1,62881:1,62983:1,63074:1,63097:1,63160:1,63167:1,63208:1,63213:1,63240:1,63241:1,63260:1,63383:1,63485:1,63498:1,63629:1,63644:2,63687:1,63706:1,63726:1,63774:1,63811:3,63816:1,63818:1,63866:1,63968:1,64071:1,64142:3,64152:1,64170:2,64180:1,64188:2,64271:1,64272:1,64294:1,64335:1,64367:1,64385:1,64411:1,64477:1,64517:1,64687:1,64745:1,64774:1,64832:1,64918:1,65173:1,65198:1,65214:1,65402:1,65523:1,65686:1,65690:1,65727:1,65808:1,65917:1,66066:1,66099:1,66135:2,66260:1,66376:1,66390:2,66567:1,66604:1,66711:1,66730:3,66795:1,66899:1,67063:1,67181:1,67192:1,67208:2,67279:4,67344:1,67431:1,67490:1,67501:2,67686:1,67692:1,67726:1,67750:1,67762:2,67851:1,67881:1,67930:1,68140:1,68168:1,68178:1,68228:1,68358:1,68429:1,68565:13,68850:1,68910:1,68939:1,68947:1,68959:1,69016:1,69069:1,69146:1,69160:1,69176:1,69218:1,69242:1,69252:1,69265:1,69281:1,69406:1,69422:1,69465:1,69585:1,69642:1,69669:1,69678:1,69889:1,69996:1,70036:1,70057:1,70130:1,70171:1,70210:2,70230:1,70244:1,70268:1,70277:1,70290:1,70408:1,70445:2,70553:1,70593:2,70696:1,70849:1,70936:1,71001:2,71073:2 188 235 1.250 1.000 4 TCGA:I 14772536 chr17 43119266 43125270 6005 - 0 GT AG 0 aC19,gC19,gC38,kG19,kG38,mG19,mG38,rG19,rG38,sG19,vG19 ,68084:1,69431:1 2 2 1.000 1.000 4 TCGA:I 14772537 chr17 43119266 43125276 6011 - 0 GT AG 0 aC19,gC19,gC38,kG19,kG38,rG19,rG38,sG38,vG19 ,65796:1,69529:1 2 2 1.000 1.000 4 TCGA:I 14772538 chr17 43119419 43231560 112142 + 0 GC AG 0 0 ,66130:1 1 1 1.000 1.000 4 TCGA:I 14772539 chr17 43119460 43156285 36826 - 0 GT AG 0 0 ,66513:1 1 1 1.000 1.000 4 TCGA:I 14772540 chr17 43119495 43119551 57 - 0 GC AG 0 0 ,70593:2 1 2 2.000 2.000 4 TCGA:I 14772541 chr17 43119503 43156337 36835 + 0 AT AC 0 0 ,70740:1 1 1 1.000 1.000 4 TCGA:I 14772542 chr17 43119575 43119605 31 - 0 GT AG 0 0 ,61442:1 1 1 1.000 1.000 4 TCGA:I 14772543 chr17 43119651 43156584 36934 - 0 AT AC 0 0 ,60404:1,61563:1,66338:1,67221:1,68008:1 5 5 1.000 1.000 4 TCGA:I 14772544 chr17 43119674 43156062 36389 - 0 GT AG 0 0 ,63105:1 1 1 1.000 1.000 4 TCGA:I 14772545 chr17 43119674 43156423 36750 - 0 GT AG 0 0 ,64061:1,68212:3,70055:1 3 5 1.667 1.000 4 TCGA:I 14772546 chr17 43119674 43156442 36769 - 0 GT AG 0 0 ,62124:1,66186:1,67877:1,70588:1,71033:3 5 7 1.400 1.000 4 TCGA:I 14772547 chr17 43119705 43156395 36691 + 0 AT AC 0 0 ,68583:1 1 1 1.000 1.000 4 TCGA:I 14772548 chr17 43119715 43156539 36825 - 0 GT AG 0 0 ,65771:1,68024:1 2 2 1.000 1.000 4 TCGA:I 14772549 chr17 43119932 43121557 1626 - 0 GC AG 0 0 ,61020:1,63383:1,70659:1 3 3 1.000 1.000 4 TCGA:I 14772550 chr17 43119932 43124016 4085 - 0 GT AG 0 aC19,cG19,cG38,gC19,gC38,kG19,kG38,mG19,mG38,rG19,rG38,sG19,sG38,vG19 ,62172:1,63077:1,67712:1,71058:1 4 4 1.000 1.000 4 TCGA:I 14772551 chr17 43119932 43125270 5339 - 0 GT AG 0 aC19,gC19,gC38,kG19,kG38,mG19,mG38,rG19,rG38,sG19,vG19 ,66049:1 1 1 1.000 1.000 4 TCGA:I 14772552 chr17 43119964 43120182 219 - 0 AT AC 0 0 ,62512:1 1 1 1.000 1.000 4 TCGA:I 14772553 chr17 43120162 43156972 36811 + 0 AT AC 0 0 ,63971:1 1 1 1.000 1.000 4 TCGA:I 14772554 chr17 43120196 43157129 36934 + 0 GT AG 0 0 ,67333:1 1 1 1.000 1.000 4 TCGA:I 14772555 chr17 43120485 43121094 610 + 0 GC AG 0 0 ,64590:1 1 1 1.000 1.000 4 TCGA:I 14772556 chr17 43120485 43147466 26982 + 0 GC AG 0 0 ,60522:1 1 1 1.000 1.000 4 TCGA:I 14772557 chr17 43120485 43157418 36934 + 0 GC AG 0 0 ,70222:1 1 1 1.000 1.000 4 TCGA:I 14772558 chr17 43120490 43145603 25114 + 0 GC AG 0 0 ,61080:1 1 1 1.000 1.000 4 TCGA:I 14772559 chr17 43120490 43147466 26977 + 0 GC AG 0 0 ,70423:1 1 1 1.000 1.000 4 TCGA:I 14772560 chr17 43120499 43123646 3148 - 0 GC AG 0 0 ,62702:1 1 1 1.000 1.000 4 TCGA:I 14772561 chr17 43120529 43120829 301 + 0 GC AG 0 0 ,59803:1,60259:1,60495:1,61611:1,62590:1,64087:1,66111:1,66212:1,66489:1,67311:1,67413:1,68227:1,68426:1,68567:1,68585:1,68950:1 16 16 1.000 1.000 4 TCGA:I 14772562 chr17 43120529 43121094 566 + 0 GC AG 0 0 ,68160:1 1 1 1.000 1.000 4 TCGA:I 14772563 chr17 43120535 43120835 301 + 0 GT AG 0 0 ,59803:1,60259:1,60495:1,61611:1,62590:1,64087:1,66111:1,66212:1,66489:1,67311:1,67413:1,68227:1,68426:1,68567:1,68585:1,68950:1 16 16 1.000 1.000 4 TCGA:I 14772564 chr17 43120535 43121453 919 + 0 GT AG 0 0 ,62963:1 1 1 1.000 1.000 4 TCGA:I 14772565 chr17 43120559 43120999 441 + 0 GT AG 0 0 ,66139:1 1 1 1.000 1.000 4 TCGA:I 14772566 chr17 43120575 43174904 54330 - 0 GC AG 0 0 ,61039:1 1 1 1.000 1.000 4 TCGA:I 14772567 chr17 43120597 43121557 961 - 0 GC AG 0 0 ,65908:1 1 1 1.000 1.000 4 TCGA:I 14772568 chr17 43120606 43120775 170 + 0 AT AC 0 0 ,66570:1 1 1 1.000 1.000 4 TCGA:I 14772569 chr17 43120663 43592998 472336 + 0 GC AG 0 0 ,67077:1 1 1 1.000 1.000 4 TCGA:I 14772570 chr17 43120669 43593004 472336 + 0 GC AG 0 0 ,67077:1 1 1 1.000 1.000 4 TCGA:I 14772571 chr17 43120695 43120999 305 + 0 GC AG 0 0 ,62579:1,64152:1,64335:1 3 3 1.000 1.000 4 TCGA:I 14772572 chr17 43120695 43121304 610 + 0 GC AG 0 0 ,60717:1,65173:1,69798:1,70799:1 4 4 1.000 1.000 4 TCGA:I 14772573 chr17 43120738 43121042 305 - 0 GC AG 0 0 ,61027:1,65705:4 2 5 2.500 2.500 4 TCGA:I 14772574 chr17 43120738 43121655 918 - 0 GC AG 0 0 ,68910:1 1 1 1.000 1.000 4 TCGA:I 14772575 chr17 43120738 43308439 187702 - 0 GC AG 0 0 ,61227:1,64121:1 2 2 1.000 1.000 4 TCGA:I 14772576 chr17 43120830 43124219 3390 + 0 GC AG 0 0 ,68977:1 1 1 1.000 1.000 4 TCGA:I 14772577 chr17 43120830 43390610 269781 + 0 GC AG 0 0 ,60481:1,60659:1,60856:1,68182:1,69268:1 5 5 1.000 1.000 4 TCGA:I 14772578 chr17 43120836 43390616 269781 + 0 GC AG 0 0 ,60481:1,60659:1,60856:1,68182:1,69268:1 5 5 1.000 1.000 4 TCGA:I 14772579 chr17 43120840 43121282 443 + 0 GT AG 0 0 ,67727:1 1 1 1.000 1.000 4 TCGA:I 14772580 chr17 43120840 43121457 618 + 0 GT AG 0 0 ,60934:2 1 2 2.000 2.000 4 TCGA:I 14772581 chr17 43120872 43124988 4117 - 0 GC AG 0 0 ,60799:1,62039:1,62929:1,63687:1,63700:1,63736:1,67373:1,68742:1 8 8 1.000 1.000 4 TCGA:I 14772582 chr17 43120881 43121500 620 - 0 AT AC 0 0 ,61048:1,68089:1 2 2 1.000 1.000 4 TCGA:I 14772583 chr17 43120939 43121249 311 - 0 GC AG 0 0 ,68492:1,69629:1 2 2 1.000 1.000 4 TCGA:I 14772584 chr17 43120962 43121138 177 + 0 GC AG 0 0 ,65037:1 1 1 1.000 1.000 4 TCGA:I 14772585 chr17 43120979 43121174 196 + 0 GC AG 0 0 ,66061:1 1 1 1.000 1.000 4 TCGA:I 14772586 chr17 43120993 43121297 305 - 0 GT AG 0 0 ,65989:1 1 1 1.000 1.000 4 TCGA:I 14772587 chr17 43121000 43121304 305 + 0 GC AG 0 0 ,65989:1 1 1 1.000 1.000 4 TCGA:I 14772588 chr17 43121006 43121618 613 + 0 GT AG 0 0 ,66866:2,70184:1 2 3 1.500 1.500 4 TCGA:I 14772589 chr17 43121089 43321817 200729 + 0 GT AG 0 0 ,68001:1 1 1 1.000 1.000 4 TCGA:I 14772590 chr17 43121108 43121360 253 + 0 GC AG 0 0 ,68617:1 1 1 1.000 1.000 4 TCGA:I 14772591 chr17 43121127 43121569 443 + 0 GC AG 0 0 ,66850:1 1 1 1.000 1.000 4 TCGA:I 14772592 chr17 43121161 43198439 77279 + 0 GT AG 0 0 ,60744:1,64647:1,65877:1,69465:1,69661:1 5 5 1.000 1.000 4 TCGA:I 14772593 chr17 43121348 43121655 308 - 0 GC AG 0 0 ,67367:1 1 1 1.000 1.000 4 TCGA:I 14772594 chr17 43121425 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4 TCGA:I 14772643 chr17 43123255 43123266 12 - 0 AT AC 0 0 ,60970:1,67557:1 2 2 1.000 1.000 4 TCGA:I 14772644 chr17 43123255 43123281 27 - 0 AT AC 0 0 ,68660:1 1 1 1.000 1.000 4 TCGA:I 14772645 chr17 43123282 43159973 36692 - 0 AT AC 0 0 ,61639:1,66724:1 2 2 1.000 1.000 4 TCGA:I 14772646 chr17 43123464 43124870 1407 - 0 GC AG 0 0 ,61189:1 1 1 1.000 1.000 4 TCGA:I 14772647 chr17 43123470 43123602 133 - 0 GC AG 0 0 ,59999:1 1 1 1.000 1.000 4 TCGA:I 14772648 chr17 43123552 43149990 26439 - 0 AT AC 0 0 ,63331:1 1 1 1.000 1.000 4 TCGA:I 14772649 chr17 43123597 43580569 456973 - 0 GT AG 0 0 ,66124:1 1 1 1.000 1.000 4 TCGA:I 14772650 chr17 43123698 43124016 319 - 0 GT AG 0 aC19,cG19,cG38,gC19,gC38,kG19,kG38,mG19,mG38,rG19,rG38,sG19,sG38,vG19 ,59985:1,60041:1,60723:1,63104:1,64950:1,65643:1,65816:1,66069:1,67357:1,68163:1,68542:1,69540:1,69605:1,70083:1 14 14 1.000 1.000 4 TCGA:I 14772651 chr17 43123698 43170125 46428 - 0 GT AG 0 aC19,gC19,gC38,kG19,kG38,rG19,rG38,sG19,sG38 ,59951:1,60804:1,66917:1 3 3 1.000 1.000 4 TCGA:I 14772652 chr17 43123740 43167745 44006 - 0 GC AG 0 0 ,69480:1 1 1 1.000 1.000 4 TCGA:I 14772653 chr17 43123740 43167776 44037 - 0 GT AG 0 0 ,67067:1 1 1 1.000 1.000 4 TCGA:I 14772654 chr17 43123759 43141454 17696 + 0 AT AC 0 0 ,60171:1 1 1 1.000 1.000 4 TCGA:I 14772655 chr17 43123826 43167976 44151 + 0 GC AG 0 0 ,61162:1,61488:1,63395:2,68328:1 4 5 1.250 1.000 4 TCGA:I 14772656 chr17 43123924 43124700 777 - 0 GT AG 0 0 ,68517:2 1 2 2.000 2.000 4 TCGA:I 14772657 chr17 43123941 43168091 44151 - 0 AT AC 0 0 ,62504:1 1 1 1.000 1.000 4 TCGA:I 14772658 chr17 43123946 43168096 44151 + 0 GT AG 0 0 ,62504:1 1 1 1.000 1.000 4 TCGA:I 14772659 chr17 43124058 43168210 44153 + 0 AT AC 0 0 ,61702:1,62413:1,63241:1,63494:1,63902:1,64046:1,64612:1,64947:1,70402:1 9 9 1.000 1.000 4 TCGA:I 14772660 chr17 43124099 43124736 638 - 0 GT AG 0 gC38,kG38,sG19,sG38 ,64050:1 1 1 1.000 1.000 4 TCGA:I 14772661 chr17 43124099 43125276 1178 - 0 GT AG 0 aC19,gC19,gC38,kG19,kG38,rG19,rG38,sG38,vG19 ,62089:1 1 1 1.000 1.000 4 TCGA:I 14772662 chr17 43124103 43124395 293 - 0 GT AG 0 0 ,59901:1,60488:1,61522:1,64038:1,65307:1,66420:1,66772:1,67932:1,68066:1 9 9 1.000 1.000 4 TCGA:I 14772663 chr17 43124103 43124514 412 - 0 GT AG 0 0 ,61521:1,65623:1,65626:2,67672:1 4 5 1.250 1.000 4 TCGA:I 14772664 chr17 43124103 43124527 425 - 0 GT AG 0 0 ,59878:1,59984:1,60118:1,60349:1,60395:2,60403:1,60498:1,60644:1,61118:1,61236:1,61314:1,61549:1,61586:1,61750:1,61772:1,62450:1,62591:4,62722:1,62787:1,63128:1,63335:1,63677:1,63842:1,64404:1,64848:1,65079:1,65376:1,65428:1,65637:1,65670:1,66099:1,66682:1,66701:1,66703:1,66772:1,67135:1,67150:1,67296:1,67426:1,67533:1,67593:1,67785:1,67851:1,68058:1,68068:1,68590:1,68830:1,69209:1,69758:1,70002:1,70120:1,70655:1,70894:1,71037:1 54 58 1.074 1.000 4 TCGA:I 14772665 chr17 43124103 43124736 634 - 0 GT AG 0 gC38,kG38,sG19,sG38 ,59761:3,59808:1,59969:1,59984:1,59986:1,60009:1,60564:2,60679:7,60708:1,60736:1,60848:1,61118:1,61168:1,61236:1,61313:1,61464:1,61999:1,62264:1,62516:1,62702:2,62709:1,62996:1,63182:1,63278:1,63297:4,63456:1,63523:1,63880:1,63929:1,63933:1,64098:1,64114:2,64166:1,64258:1,64404:1,64489:1,64525:1,64619:1,64832:2,64872:1,65037:1,65040:2,65452:2,65462:1,65492:1,65798:1,66169:2,66272:1,66417:1,66428:1,66593:1,66658:1,66710:1,66729:1,66778:1,66866:1,67084:1,67202:1,67477:1,67733:1,67742:1,67966:2,68106:6,68134:1,68189:1,68326:1,68340:1,68427:1,68493:1,68533:1,68542:1,68596:2,68856:2,68930:1,69022:1,69167:1,69511:1,69589:1,69635:2,69639:1,69860:1,70104:1,70277:1,70316:2,70413:1,70850:1 86 114 1.326 1.000 4 TCGA:I 14772666 chr17 43124103 43125181 1079 - 0 GT AG 0 aC19,gC19,gC38,kG19,kG38,rG19,rG38,sG19,sG38,vG19 ,61112:1,61642:1,61896:1,61929:1,62892:1,62929:1,63009:1,63288:1,63874:1,64170:2,65462:1,65530:1,66053:1,67213:1,68391:1,68429:1,70036:1 17 18 1.059 1.000 4 TCGA:I 14772667 chr17 43124103 43125270 1168 - 0 GT AG 0 aC19,gC19,gC38,kG19,kG38,mG19,mG38,rG19,rG38,sG19,vG19 ,59807:1,59808:2,59827:1,59935:1,59948:2,59995:1,60072:1,60187:2,60191:1,60210:1,60350:1,60394:1,60500:1,60568:1,60653:1,60679:2,60735:1,60763:1,60839:1,60863:1,61022:1,61059:1,61082:1,61298:2,61454:2,61707:1,61761:4,61781:1,61974:1,62061:1,62096:1,62291:1,62366:1,62429:1,62507:1,62516:1,62562:1,62624:1,62868:1,62897:1,63027:1,63200:1,63241:1,63257:1,63312:1,63383:1,63524:2,63590:1,63690:1,63706:1,63880:3,63888:1,63920:1,63973:1,64058:1,64085:1,64152:1,64170:1,64192:1,64281:1,64297:2,64433:1,64500:1,64590:1,64637:1,64657:1,64745:1,64830:1,64837:1,64986:1,65024:1,65498:1,65510:1,65511:1,65512:1,65837:1,65931:1,66131:2,66264:1,66452:1,66453:1,66711:1,66850:1,66866:1,66961:2,67121:1,67264:1,67497:3,67671:2,67750:1,67762:1,67781:1,67811:1,67882:1,67900:1,67904:1,67908:1,67939:1,68367:1,68470:1,68600:1,68626:1,68634:1,68642:1,68694:1,68700:1,68798:3,68841:1,68913:1,68989:1,69037:1,69069:1,69196:1,69197:1,69231:3,69422:2,69478:1,69489:2,69537:1,69719:1,69725:1,69964:2,70171:1,70183:1,70327:1,70434:1,70445:2,70523:1,70583:2,70746:1,70812:2,71013:1,71096:1 133 161 1.211 1.000 4 TCGA:I 14772668 chr17 43124103 43125276 1174 - 0 GT AG 0 aC19,gC19,gC38,kG19,kG38,rG19,rG38,sG38,vG19 ,59820:3,59839:1,59897:3,59948:3,60190:1,60207:1,60373:2,60406:1,60447:1,60508:1,60539:1,60593:1,60816:1,60869:1,60916:1,60947:1,61152:1,61215:1,61276:1,61308:1,61314:1,61315:1,61435:2,61464:2,61553:1,61647:1,61674:1,61761:1,61839:1,61993:1,62058:1,62175:1,62260:1,62291:2,62401:1,62495:1,62516:1,62664:1,62678:1,62787:1,62810:1,63015:1,63039:1,63128:1,63188:1,63280:1,63293:1,63300:1,63354:2,63577:1,63799:1,64099:1,64101:1,64271:1,64389:1,64497:1,64525:2,64562:1,64629:1,64647:1,64710:2,64744:1,64830:3,65034:1,65097:1,65214:1,65631:1,65688:1,65843:1,65895:1,66053:1,66189:1,66287:1,66317:3,66380:1,66470:1,66644:1,66961:2,67194:1,67308:1,67367:1,67372:1,67452:1,67560:1,67566:1,67612:1,67650:1,67729:1,67762:1,67791:1,67825:1,67845:1,67849:1,67893:3,67979:1,68246:1,68286:1,68307:1,68469:1,68643:1,68664:1,68805:1,68822:1,68841:2,68980:1,69100:1,69165:1,69231:1,69461:1,69487:1,69677:1,69900:1,69962:1,69996:1,70384:1,70484:1,70601:1,70807:2,70846:1,70868:1,70919:1 121 143 1.182 1.000 4 TCGA:I 14772669 chr17 43124103 43128452 4350 - 0 GT AG 0 0 ,64612:1 1 1 1.000 1.000 4 TCGA:I 14772670 chr17 43124103 43166979 42877 - 0 GT AG 0 aC19,gC19,gC38,kG19,kG38,sG19,sG38 ,65334:6,65870:1 2 7 3.500 3.500 4 TCGA:I 14772671 chr17 43124103 43170125 46023 - 0 GT AG 0 aC19,gC19,gC38,kG19,kG38,rG19,rG38,sG19,sG38 ,70689:1 1 1 1.000 1.000 4 TCGA:I 14772672 chr17 43124116 43124238 123 - 0 GT AG aC19,gC19,gC38,kG19,kG38,mG19,mG38,rG19,rG38,sG19,sG38,vG19 0 ,59783:1,61368:1,61839:1,61890:1,62382:1,62400:1,62675:1,62970:1,64180:1,64557:1,65206:1,65857:1,69032:1,69475:1,69479:1 15 15 1.000 1.000 4 TCGA:I 14772673 chr17 43124116 43124395 280 - 0 GT AG aC19,gC19,gC38,kG19,kG38,mG19,mG38,rG19,rG38,sG19,sG38,vG19 0 ,59823:1,59901:1,59923:1,59955:1,60234:1,60738:2,60767:1,60777:1,60827:1,61164:1,61240:1,61378:1,61596:1,61616:1,61729:2,61789:1,62214:4,62272:1,62337:1,62440:1,62537:1,62549:1,62591:1,62649:1,62699:1,62843:1,62929:1,63045:1,63110:1,63133:1,63216:1,63268:1,63363:2,63711:1,63719:1,63880:1,64011:1,64013:1,64123:2,64472:1,64475:2,64482:1,64515:1,64552:1,64619:1,64622:1,64657:1,64662:2,64681:1,64696:1,64764:2,64844:2,65155:1,65175:1,65206:1,65320:1,65486:1,65511:1,65576:1,65590:1,65660:1,65728:1,65770:1,66156:1,66265:1,66320:1,66331:1,66365:1,66407:1,66420:1,66485:1,66490:1,66629:1,66646:1,66703:1,66710:1,66778:1,66866:2,67313:1,68136:1,68213:1,68328:1,68458:1,68517:1,68558:2,68634:1,68754:1,68795:1,68932:1,69026:1,69041:1,69093:1,69179:1,69185:1,69227:1,69239:1,69261:1,69479:1,69549:1,69740:1,69788:1,69789:1,69983:2,69996:1,69998:1,70089:1,70124:2,70182:2,70215:1,70461:1,70505:1,70655:1,70733:2,70894:1,70901:1,70926:1,70979:1,71040:1 118 135 1.144 1.000 4 TCGA:I 14772674 chr17 43124116 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3858 9113 2.362 1.000 4 TCGA:I 14772684 chr17 43124116 43125372 1257 - 0 GT AG aC19,gC19,gC38,kG19,kG38,mG19,mG38,rG19,rG38,sG19,sG38,vG19 0 ,60057:1,60650:1,60684:1,61956:1,62351:1,63362:1,65681:1,66958:1,70752:1,70838:2 10 11 1.100 1.000 4 TCGA:I 14772685 chr17 43124116 43125598 1483 - 0 GT AG aC19,gC19,gC38,kG19,kG38,mG19,mG38,rG19,rG38,sG19,sG38,vG19 0 ,64839:1 1 1 1.000 1.000 4 TCGA:I 14772686 chr17 43124116 43125695 1580 - 0 GT AG aC19,gC19,gC38,kG19,kG38,mG19,mG38,rG19,rG38,sG19,sG38,vG19 0 ,63944:1 1 1 1.000 1.000 4 TCGA:I 14772687 chr17 43124116 43148321 24206 - 0 GT AG aC19,gC19,gC38,kG19,kG38,mG19,mG38,rG19,rG38,sG19,sG38,vG19 0 ,60112:2 1 2 2.000 2.000 4 TCGA:I 14772688 chr17 43124116 43166979 42864 - 0 GT AG aC19,gC19,gC38,kG19,kG38,mG19,mG38,rG19,rG38,sG19,sG38,vG19 aC19,gC19,gC38,kG19,kG38,sG19,sG38 ,62290:1,65167:2,65644:1,67592:1,68463:1,68630:1 6 7 1.167 1.000 4 TCGA:I 14772689 chr17 43124116 43169166 45051 - 0 GT AG aC19,gC19,gC38,kG19,kG38,mG19,mG38,rG19,rG38,sG19,sG38,vG19 0 ,64886:1,69161:1 2 2 1.000 1.000 4 TCGA:I 14772690 chr17 43124116 43169756 45641 - 0 GT AG aC19,gC19,gC38,kG19,kG38,mG19,mG38,rG19,rG38,sG19,sG38,vG19 sG38 ,60187:1,63436:1,68033:1 3 3 1.000 1.000 4 TCGA:I 14772691 chr17 43124116 43169762 45647 - 0 GT AG aC19,gC19,gC38,kG19,kG38,mG19,mG38,rG19,rG38,sG19,sG38,vG19 0 ,60582:1,63476:1,71093:1 3 3 1.000 1.000 4 TCGA:I 14772692 chr17 43124116 43170125 46010 - 1 GT AG aC19,gC19,gC38,kG19,kG38,mG19,mG38,rG19,rG38,sG19,sG38,vG19 aC19,gC19,gC38,kG19,kG38,rG19,rG38,sG19,sG38 ,59812:2,60209:1,60540:1,60717:1,61028:1,61247:1,61775:2,62575:1,63160:1,63464:1,63895:1,64061:1,65203:3,65521:1,67362:1,67947:1,68491:1,68732:1,70417:1 19 23 1.211 1.000 4 TCGA:I 14772693 chr17 43124125 43124736 612 + 0 AT AC 0 gC38,kG38,sG19,sG38 ,62267:1 1 1 1.000 1.000 4 TCGA:I 14772694 chr17 43124125 43159623 35499 + 0 AT AC 0 0 ,61459:1 1 1 1.000 1.000 4 TCGA:I 14772695 chr17 43124125 43168277 44153 + 0 AT AC 0 0 ,60074:1,68004:1,69049:1 3 3 1.000 1.000 4 TCGA:I 14772696 chr17 43124136 43168288 44153 + 0 AT AC 0 0 ,68004:1,69049:1 2 2 1.000 1.000 4 TCGA:I 14772697 chr17 43124138 43124736 599 + 0 AT AC 0 gC38,kG38,sG19,sG38 ,61553:1 1 1 1.000 1.000 4 TCGA:I 14772698 chr17 43124148 43124736 589 - 0 GT AG 0 gC38,kG38,sG19,sG38 ,62319:1 1 1 1.000 1.000 4 TCGA:I 14772699 chr17 43124148 43125270 1123 - 0 GT AG 0 aC19,gC19,gC38,kG19,kG38,mG19,mG38,rG19,rG38,sG19,vG19 ,64433:1,67930:1,69477:1 3 3 1.000 1.000 4 TCGA:I 14772700 chr17 43124148 43125276 1129 - 0 GT AG 0 aC19,gC19,gC38,kG19,kG38,rG19,rG38,sG38,vG19 ,69924:1,70230:1 2 2 1.000 1.000 4 TCGA:I 14772701 chr17 43124159 43125002 844 + 0 GT AG 0 0 ,66800:1 1 1 1.000 1.000 4 TCGA:I 14772702 chr17 43124220 43168682 44463 + 0 GT AG 0 0 ,65049:1 1 1 1.000 1.000 4 TCGA:I 14772703 chr17 43124306 43325242 200937 + 0 AT AC 0 0 ,61594:1 1 1 1.000 1.000 4 TCGA:I 14772704 chr17 43124327 43168764 44438 + 0 AT AC 0 0 ,64996:1 1 1 1.000 1.000 4 TCGA:I 14772705 chr17 43124327 43504655 380329 + 0 AT AC 0 0 ,60961:1,62293:2,63739:1,63765:1,63816:1,65586:1,66937:1,67418:1,67795:1 9 10 1.111 1.000 4 TCGA:I 14772706 chr17 43124376 43168711 44336 + 0 GC AG 0 0 ,66368:1 1 1 1.000 1.000 4 TCGA:I 14772707 chr17 43124399 43168743 44345 - 0 AT AC 0 0 ,61597:1 1 1 1.000 1.000 4 TCGA:I 14772708 chr17 43124419 43125270 852 - 0 GT AG 0 aC19,gC19,gC38,kG19,kG38,mG19,mG38,rG19,rG38,sG19,vG19 ,60635:1 1 1 1.000 1.000 4 TCGA:I 14772709 chr17 43124430 43168859 44430 - 0 AT AC 0 0 ,60679:1,64324:1,64459:1 3 3 1.000 1.000 4 TCGA:I 14772710 chr17 43124445 43124736 292 - 0 GT AG 0 gC38,kG38,sG19,sG38 ,67162:1 1 1 1.000 1.000 4 TCGA:I 14772711 chr17 43124445 43125270 826 - 0 GT AG 0 aC19,gC19,gC38,kG19,kG38,mG19,mG38,rG19,rG38,sG19,vG19 ,68878:1 1 1 1.000 1.000 4 TCGA:I 14772712 chr17 43124451 43124736 286 - 0 GT AG 0 gC38,kG38,sG19,sG38 ,59822:1,67423:1,68114:2,70596:1 4 5 1.250 1.000 4 TCGA:I 14772713 chr17 43124451 43125276 826 - 0 GT AG 0 aC19,gC19,gC38,kG19,kG38,rG19,rG38,sG38,vG19 ,63880:1,69996:1 2 2 1.000 1.000 4 TCGA:I 14772714 chr17 43124500 43124527 28 - 0 GT AG 0 0 ,67762:1,68636:1 2 2 1.000 1.000 4 TCGA:I 14772715 chr17 43124500 43124876 377 - 0 GC AG 0 0 ,59914:1,60661:1 2 2 1.000 1.000 4 TCGA:I 14772716 chr17 43124500 43168815 44316 - 0 GC AG 0 0 ,64967:1 1 1 1.000 1.000 4 TCGA:I 14772717 chr17 43124506 43168814 44309 + 0 GC AG 0 0 ,63413:1 1 1 1.000 1.000 4 TCGA:I 14772718 chr17 43124515 43124687 173 - 0 GT AG 0 0 ,65928:1 1 1 1.000 1.000 4 TCGA:I 14772719 chr17 43124515 43167902 43388 - 0 GC AG 0 0 ,66189:3 1 3 3.000 3.000 4 TCGA:I 14772720 chr17 43124538 43124700 163 - 0 GT AG 0 0 ,65770:1 1 1 1.000 1.000 4 TCGA:I 14772721 chr17 43124559 43168764 44206 + 0 AT AC 0 0 ,62512:1,63278:1,69813:1 3 3 1.000 1.000 4 TCGA:I 14772722 chr17 43124559 43168988 44430 + 0 AT AC 0 0 ,68254:1,68482:1 2 2 1.000 1.000 4 TCGA:I 14772723 chr17 43124604 43168937 44334 - 0 GC AG 0 0 ,64810:1,70205:1 2 2 1.000 1.000 4 TCGA:I 14772724 chr17 43124604 43168957 44354 - 0 GT AG 0 0 ,68349:1 1 1 1.000 1.000 4 TCGA:I 14772725 chr17 43124611 43168927 44317 + 0 GC AG 0 0 ,61111:1 1 1 1.000 1.000 4 TCGA:I 14772726 chr17 43124612 43168929 44318 - 0 GC AG 0 0 ,68585:1 1 1 1.000 1.000 4 TCGA:I 14772727 chr17 43124649 43168929 44281 - 0 GC AG 0 0 ,68390:1 1 1 1.000 1.000 4 TCGA:I 14772728 chr17 43124649 43168988 44340 - 0 GT AG 0 0 ,68710:1 1 1 1.000 1.000 4 TCGA:I 14772729 chr17 43124649 43169029 44381 - 0 GT AG 0 0 ,60034:1,62286:1,64917:1 3 3 1.000 1.000 4 TCGA:I 14772730 chr17 43124653 43168929 44277 - 0 GC AG 0 0 ,66649:1,67154:1 2 2 1.000 1.000 4 TCGA:I 14772731 chr17 43124653 43168957 44305 - 0 GT AG 0 0 ,61566:1,68931:1,69327:1,70415:1,70901:1 5 5 1.000 1.000 4 TCGA:I 14772732 chr17 43124653 43168961 44309 - 0 GT AG 0 0 ,61787:1 1 1 1.000 1.000 4 TCGA:I 14772733 chr17 43124666 43167589 42924 - 0 GT AG 0 0 ,60493:1 1 1 1.000 1.000 4 TCGA:I 14772734 chr17 43124668 43148609 23942 - 0 AT AC 0 0 ,66889:1 1 1 1.000 1.000 4 TCGA:I 14772735 chr17 43124668 43168972 44305 + 0 GT AG 0 0 ,61663:1 1 1 1.000 1.000 4 TCGA:I 14772736 chr17 43124668 43168975 44308 - 0 AT AC 0 0 ,64789:1,66934:1,70415:2,70567:1 4 5 1.250 1.000 4 TCGA:I 14772737 chr17 43124670 43168929 44260 - 0 GC AG 0 0 ,68452:1 1 1 1.000 1.000 4 TCGA:I 14772738 chr17 43124670 43168937 44268 - 0 GC AG 0 0 ,64239:2 1 2 2.000 2.000 4 TCGA:I 14772739 chr17 43124670 43168961 44292 - 0 GT AG 0 0 ,60488:1 1 1 1.000 1.000 4 TCGA:I 14772740 chr17 43124670 43168996 44327 - 0 GC AG 0 0 ,65735:1 1 1 1.000 1.000 4 TCGA:I 14772741 chr17 43124673 43124976 304 - 0 GT AG 0 0 ,70032:2 1 2 2.000 2.000 4 TCGA:I 14772742 chr17 43124673 43168929 44257 - 0 GC AG 0 0 ,60449:1,69556:1 2 2 1.000 1.000 4 TCGA:I 14772743 chr17 43124673 43168957 44285 - 0 GT AG 0 0 ,61797:1 1 1 1.000 1.000 4 TCGA:I 14772744 chr17 43124673 43168961 44289 - 0 GT AG 0 0 ,61921:1 1 1 1.000 1.000 4 TCGA:I 14772745 chr17 43124688 43160281 35594 + 0 AT AC 0 0 ,63260:1 1 1 1.000 1.000 4 TCGA:I 14772746 chr17 43124688 43168913 44226 + 0 AT AC 0 0 ,62437:1 1 1 1.000 1.000 4 TCGA:I 14772747 chr17 43124688 43169117 44430 + 0 AT AC 0 0 ,66232:1 1 1 1.000 1.000 4 TCGA:I 14772748 chr17 43124690 43168988 44299 + 0 AT AC 0 0 ,62480:1,66147:1 2 2 1.000 1.000 4 TCGA:I 14772749 chr17 43124701 43169130 44430 - 0 GT AG 0 0 ,66232:1,70224:1 2 2 1.000 1.000 4 TCGA:I 14772750 chr17 43124752 43168859 44108 - 0 AT AC 0 0 ,64058:1 1 1 1.000 1.000 4 TCGA:I 14772751 chr17 43124802 43124956 155 + 0 GC AG 0 0 ,60187:1 1 1 1.000 1.000 4 TCGA:I 14772752 chr17 43124803 43125270 468 - 0 GT AG 0 aC19,gC19,gC38,kG19,kG38,mG19,mG38,rG19,rG38,sG19,vG19 ,61880:1 1 1 1.000 1.000 4 TCGA:I 14772753 chr17 43124845 43124870 26 - 0 GC AG 0 0 ,67111:1 1 1 1.000 1.000 4 TCGA:I 14772754 chr17 43124864 43124876 13 - 0 GC AG 0 0 ,60177:1,61234:1,62363:1,63359:2,63792:1,64540:1 6 7 1.167 1.000 4 TCGA:I 14772755 chr17 43124864 43125618 755 - 0 GC AG 0 0 ,65458:1 1 1 1.000 1.000 4 TCGA:I 14772756 chr17 43124877 43124988 112 - 0 GC AG 0 0 ,60500:1 1 1 1.000 1.000 4 TCGA:I 14772757 chr17 43124909 43125181 273 - 0 GT AG 0 aC19,gC19,gC38,kG19,kG38,rG19,rG38,sG19,sG38,vG19 ,68172:1 1 1 1.000 1.000 4 TCGA:I 14772758 chr17 43124909 43125270 362 - 0 GT AG 0 aC19,gC19,gC38,kG19,kG38,mG19,mG38,rG19,rG38,sG19,vG19 ,61161:1,61351:2,62645:1,63009:1,63911:1,64681:1,64698:1,65317:1,67572:1,68028:1,69041:1,69093:1 12 13 1.083 1.000 4 TCGA:I 14772759 chr17 43124909 43125276 368 - 0 GT AG 0 aC19,gC19,gC38,kG19,kG38,rG19,rG38,sG38,vG19 ,62702:1,63379:1,63765:1,67218:1,68659:1,69852:1,70124:1 7 7 1.000 1.000 4 TCGA:I 14772760 chr17 43124972 43125270 299 - 0 GT AG 0 aC19,gC19,gC38,kG19,kG38,mG19,mG38,rG19,rG38,sG19,vG19 ,70120:1 1 1 1.000 1.000 4 TCGA:I 14772761 chr17 43125010 43125066 57 + 0 GT AG 0 0 ,66616:2 1 2 2.000 2.000 4 TCGA:I 14772762 chr17 43125026 43169509 44484 + 0 AT AC 0 0 ,60641:1,62264:1,67979:1 3 3 1.000 1.000 4 TCGA:I 14772763 chr17 43125036 43125270 235 - 0 GT AG 0 aC19,gC19,gC38,kG19,kG38,mG19,mG38,rG19,rG38,sG19,vG19 ,60947:1,61195:1,61199:1,61918:1,62558:1,63162:1,63348:1,66852:1,67689:1,68910:1,69890:1,69923:1,70048:1,70448:1,70764:1,70972:2 16 17 1.062 1.000 4 TCGA:I 14772764 chr17 43125036 43125276 241 - 0 GT AG 0 aC19,gC19,gC38,kG19,kG38,rG19,rG38,sG38,vG19 ,60745:1,61210:1,62558:2,65661:1,66099:1,67497:1 6 7 1.167 1.000 4 TCGA:I 14772765 chr17 43125103 43169586 44484 - 0 GT AG 0 0 ,65627:1 1 1 1.000 1.000 4 TCGA:I 14772766 chr17 43125118 43169421 44304 - 0 GC AG 0 0 ,60034:1 1 1 1.000 1.000 4 TCGA:I 14772767 chr17 43125138 43125216 79 - 0 GC AG 0 0 ,61674:1 1 1 1.000 1.000 4 TCGA:I 14772768 chr17 43125145 43169630 44486 - 0 GC AG 0 0 ,60849:2,60993:1,61545:1,61892:1,61964:1,62093:1,63148:1,63405:1,63778:1,64457:1,64701:3,64740:1,65076:1,65819:1,66069:1,66753:1,66939:1,67074:1,67155:1,67166:1,67492:1,67516:1,67557:1,67671:1,68235:1,68245:1,68522:1,68915:1,69011:1,69190:1,69376:1,70013:1,70329:2,70557:1,70690:1 35 39 1.114 1.000 4 TCGA:I 14772769 chr17 43125152 43169637 44486 + 0 GT AG 0 0 ,60849:2,60993:1,61545:1,61892:1,61964:1,62093:1,63148:1,63405:1,63778:1,64457:1,64701:3,64740:1,65076:1,65819:1,66069:1,66753:1,66939:1,67074:1,67155:1,67166:1,67492:1,67516:1,67557:1,67671:1,68235:1,68245:1,68522:1,68915:1,69011:1,69190:1,69376:1,70013:1,70329:2,70557:1,70690:1 35 39 1.114 1.000 4 TCGA:I 14772770 chr17 43125208 43125296 89 - 0 GC AG 0 0 ,70751:1 1 1 1.000 1.000 4 TCGA:I 14772771 chr17 43125245 43323396 198152 - 0 GC AG 0 0 ,60894:3,61177:1,61360:1,61672:1,62559:1,68246:1,70388:1 7 9 1.286 1.000 4 TCGA:I 14772772 chr17 43125262 43169728 44467 - 0 GC AG 0 0 ,70066:1 1 1 1.000 1.000 4 TCGA:I 14772773 chr17 43125295 43169780 44486 + 0 GC AG 0 0 ,62012:1,65397:1,66852:1,67038:1,68216:1,68948:1 6 6 1.000 1.000 4 TCGA:I 14772774 chr17 43125297 43169782 44486 - 0 GC AG 0 0 ,62012:1,65397:1,66852:1,67038:1,68216:1,68948:1 6 6 1.000 1.000 4 TCGA:I 14772775 chr17 43125337 43167005 41669 + 0 GC AG 0 0 ,69642:1 1 1 1.000 1.000 4 TCGA:I 14772776 chr17 43125339 43169717 44379 - 0 GC AG 0 0 ,67242:1 1 1 1.000 1.000 4 TCGA:I 14772777 chr17 43125339 43169824 44486 - 0 GC AG 0 0 ,65859:1,66071:1,69226:1,70957:1 4 4 1.000 1.000 4 TCGA:I 14772778 chr17 43125359 43231787 106429 - 0 GC AG 0 0 ,61159:1,67852:1 2 2 1.000 1.000 4 TCGA:I 14772779 chr17 43125359 43388961 263603 - 0 GC AG 0 0 ,61111:1,65385:1,67528:1 3 3 1.000 1.000 4 TCGA:I 14772780 chr17 43125459 43125630 172 - 0 GC AG 0 0 ,69513:1 1 1 1.000 1.000 4 TCGA:I 14772781 chr17 43125459 43170276 44818 - 0 GC AG 0 0 ,67336:1,69804:1,71109:1 3 3 1.000 1.000 4 TCGA:I 14772782 chr17 43125480 43125644 165 + 0 GT AG 0 0 ,59926:1,62341:1 2 2 1.000 1.000 4