# intron

chrom: chr9
strand: +
right_annotated: ENSMUSG00000055334.4:Snupn:protein_coding:1391
samples:
,0:67405,1:41841,2:62898,3:29339,4:21936,5:36734,6:249754,7:38541,8:324507,9:270746,10:574584,11:692968,12:68865,13:29034,14:39515,15:15312,16:51066,17:39549,18:29581,19:30715


chrom: chr9
strand: +
right_annotated: ENSMUSG00000032290.7:Ptpn9:protein_coding:4101
samples:
,0:144174,1:92810,2:291562,3:124478,4:196001,5:383142,6:881046,7:106527,8:211473,9:113910,10:7177,11:108628,12:51644,13:3391,14:11671,15:13153,16:34861,17:27411,18:16660,19:22964


chrom: chr9
strand: -
right_annotated: ENSMUSG00000074284.6:Gm10658:antisense_RNA:1241
samples:
,0:12131,1:5911,2:16297,3:8018,4:10100,5:19756,6:3494,7:2718,8:12780,9:12265,10:521,11:446,12:22210,14:637,15:839,16:4849,17:2051,18:500,19:1132


chrom: chr9
strand: +
right_annotated: ENSMUSG00000042557.14:Sin3a:protein_coding:5225
samples:
,0:251127,1:163468,2:516630,3:324645,4:269996,5:545075,6:625044,7:102469,8:403761,9:290189,10:122753,11:405789,12:5024,13:360,14:48446,15:42936,16:53537,17:27364,18:45283,19:36104


chrom: chr9
strand: -
right_annotated: ENSMUSG00000086728.2:Man2c1os:antisense_RNA:1910
samples:
,0:18001,1:13249,2:33418,3:17289,4:16035,5:27745,6:11370,7:2089,8:13028,9:9088,11:16986,12:1935,13:3663,14:1753,15:5702,16:3536,17:1050,18:5120,19:4365


chrom: chr9
strand: +
right_annotated: ENSMUSG00000032295.15:Man2c1:protein_coding:3820
samples:
,0:223851,1:154663,2:305908,3:179404,4:161225,5:238930,6:108568,7:19291,8:75636,9:49400,10:13257,11:172745,12:42450,13:96334,14:23500,15:34805,16:61957,17:24287,18:43776,19:44476


chrom: chr9
strand: -
right_annotated: ENSMUSG00000032298.13:Neil1:protein_coding:1871
samples:
,0:1734,1:629,2:63826,3:28548,4:13624,5:20342,6:123860,7:7964,8:13485,9:17029,10:144958,11:209322,12:5690,13:17767,14:316,15:5851,16:16900,17:12048,18:9158,19:4820


chrom: chr9
strand: -
right_annotated: ENSMUSG00000032299.10:Commd4:protein_coding:858
samples:
,0:19047,1:12469,2:171106,3:103026,4:67478,5:107078,6:501628,7:138049,8:350325,9:230329,10:854099,11:431023,12:124985,13:133987,14:111464,15:54127,16:132724,17:125519,18:177992,19:85144


chrom: chr9
strand: -
right_annotated: ENSMUSG00000032300.7:1700017B05Rik:protein_coding:4946
samples:
,0:318032,1:240977,2:235682,3:147013,4:272547,5:571429,6:53030,7:6708,8:36308,9:2592,10:10,13:8,14:4672,15:3062,18:479,19:7806


chrom: chr9
strand: +
right_annotated: ENSMUSG00000066626.5:Gm5121:processed_pseudogene:627
samples:
,0:6133,1:3713,2:81556,3:61224,4:19939,5:23088,6:50569,7:12502,8:28121,9:15591,10:31751,11:13530,12:7877,13:3061,14:3199,15:3094,16:3655,17:5234,18:4958,19:4296


chrom: chr9
strand: -
right_annotated: ENSMUSG00000063849.6:Ppcdc:protein_coding:4516
samples:
,0:35767,1:23309,2:84873,3:80274,4:53149,5:81434,6:305753,7:32367,8:162942,9:56898,10:180,11:92504,12:29980,13:3497,14:33820,15:5161,16:19407,17:27262,18:21061,19:11214


chrom: chr9
strand: -
right_annotated: ENSMUSG00000040722.7:Scamp5:protein_coding:3344
samples:
,0:11654,1:5708,2:98033,3:66601,4:62385,5:119417,6:102232,7:14949,8:27101,9:12650,11:1714,12:22885,13:7367,14:817399,15:581340,16:907510,17:976207,18:816163,19:735518


chrom: chr9
strand: +
right_annotated: ENSMUSG00000111380.1:AC125321.1:processed_pseudogene:594
samples:
,0:4724,1:2159,2:21455,3:13252,4:4977,5:9202,6:11756,7:3068,8:15233,9:8783,10:8847,11:22431,12:1494,13:2458,14:5074,15:3359,16:5052,17:4347,18:6213,19:3573


chrom: chr9
strand: +
right_annotated: ENSMUSG00000111414.1:AC125321.2:processed_pseudogene:779
samples:
,0:400,1:476,2:1469,3:238,4:268,5:85,6:8013,7:1669,8:2952,9:2734,10:10669,11:6323,12:322,13:606,14:194,15:179,16:270,17:292,18:86,19:139


chrom: chr9
strand: +
right_annotated: ENSMUSG00000074280.6:Gm6166:processed_pseudogene:409
samples:
,0:6567,1:2226,2:128031,3:139091,4:120778,5:255167,6:26387,7:6857,8:20028,9:16292,10:29407,11:8584,12:10263,13:6417,14:23125,15:15091,16:24095,17:18423,18:30344,19:33106


chrom: chr9
strand: +
right_annotated: ENSMUSG00000000088.7:Cox5a:protein_coding:645
samples:
,0:360166,1:244134,2:295709,3:181328,4:158651,5:284827,6:1160740,7:215577,8:697370,9:595438,10:804125,11:505404,12:188558,13:63674,14:269248,15:190397,16:343855,17:265299,18:376258,19:238763


chrom: chr9
strand: -
right_annotated: ENSMUSG00000097445.1:Gm26631:bidirectional_promoter_lncRNA:2505
samples:
,0:121206,1:78980,2:106130,3:63725,4:56120,5:101473,6:629364,7:97861,8:390446,9:294092,10:382909,11:516754,12:84382,13:26413,14:130821,15:89989,16:165689,17:123094,18:181083,19:115685


chrom: chr9
strand: +
right_annotated: ENSMUSG00000032305.15:Fam219b:protein_coding:3052
samples:
,0:30728,1:22393,2:104929,3:58813,4:90984,5:166291,6:481519,7:35370,8:141290,9:82113,10:3586,11:12628,12:490179,13:60233,14:7052,15:28675,16:29791,17:48830,18:52008,19:29857


chrom: chr9
strand: -
right_annotated: ENSMUSG00000032306.14:Mpi:protein_coding:1780
samples:
,0:720810,1:500905,2:138710,3:106484,4:139341,5:214664,6:199217,7:18412,8:118419,9:112041,10:148932,11:131032,12:66746,13:98565,14:257577,15:77237,16:166968,17:170032,18:175487,19:123883


chrom: chr9
strand: +
right_annotated: ENSMUSG00000040188.10:Scamp2:protein_coding:2340
samples:
,0:393582,1:257598,2:241053,3:164340,4:256179,5:413542,6:1040645,7:119115,8:367463,9:444407,10:1138873,11:839328,12:382178,13:101937,14:1527,15:5733,16:5612,17:11145,18:6329,19:12803


chrom: chr9
strand: +
right_annotated: ENSMUSG00000032308.9:Ulk3:protein_coding:2826
samples:
,0:7713,1:5526,2:75581,3:30980,4:46712,5:90435,6:189912,7:19711,8:39295,9:14784,10:86,11:219931,12:135175,13:1127,14:28147,15:16288,16:43836,17:31461,18:47642,19:21653


chrom: chr9
strand: -
right_annotated: ENSMUSG00000039714.9:Cplx3:protein_coding:2953
samples:
,0:687,1:200,2:100,3:700,4:599,5:350,12:47,14:268160,15:133639,16:101636,17:108667,18:202185,19:55757


chrom: chr9
strand: -
right_annotated: ENSMUSG00000032312.7:Csk:protein_coding:3338
samples:
,0:40151,1:26000,2:279588,3:140018,4:127737,5:200561,6:298938,7:39749,8:84329,9:79110,10:194479,11:57793,12:28980,13:39383,14:4168,15:5966,16:2566,17:4338,18:246,19:4122


chrom: chr9
strand: +
right_annotated: ENSMUSG00000038957.13:Edc3:protein_coding:5708
samples:
,0:177294,1:116228,2:274208,3:170757,4:111517,5:202481,6:622665,7:96653,8:339628,9:272027,10:528112,11:440500,12:98316,13:136259,14:151987,15:86766,16:104200,17:205255,18:211157,19:112327


chrom: chr9
strand: -
right_annotated: ENSMUSG00000032316.8:Clk3:protein_coding:2496
samples:
,0:325191,1:199389,2:313870,3:167449,4:128032,5:248093,6:818693,7:139986,8:483905,9:507631,10:691424,11:818101,12:124915,13:218277,14:115112,15:79399,16:114796,17:108878,18:112849,19:76933


chrom: chr9
strand: +
right_annotated: ENSMUSG00000091908.7:Gm17231:antisense_RNA:1106
samples:
,0:21472,1:14282,2:3025,3:870,4:1179,5:2515,6:5045,7:300,8:1409,9:1666,12:7841,13:21,14:1548,15:1320,16:2490,18:1737,19:97


chrom: chr9
strand: -
right_annotated: ENSMUSG00000004661.15:Arid3b:protein_coding:4521
samples:
,0:204467,1:140913,2:25187,3:15429,4:11297,5:23936,6:117321,7:29346,8:113074,9:31707,10:69923,11:68161,12:231868,13:29211,14:17719,15:2495,16:20889,17:10821,18:2349,19:1885


chrom: chr9
strand: +
right_annotated: ENSMUSG00000055720.10:Ubl7:protein_coding:1483
samples:
,0:744717,1:533806,2:166540,3:88025,4:63685,5:106271,6:743171,7:123885,8:468232,9:216314,10:138467,11:216345,12:65141,13:68787,14:105134,15:111893,16:303441,17:240390,18:285807,19:193760


chrom: chr9
strand: +
right_annotated: ENSMUSG00000038264.8:Sema7a:protein_coding:3297
samples:
,0:116504,1:76009,2:652383,3:384028,4:480417,5:1105089,6:4096,7:1982,8:2397,9:5297,12:37771,14:23562,15:31462,16:53091,17:28052,18:17217,19:9075


chrom: chr9
strand: +
right_annotated: ENSMUSG00000097604.1:Gm17322:lincRNA:2169
samples:
,0:1174,1:1096,2:14325,3:9375,4:9760,5:23924,6:22664,7:2083,8:3342,9:45986,11:91146,14:127839,15:84874,16:159735,17:91090,18:108898,19:47850


chrom: chr9
strand: +
right_annotated: ENSMUSG00000032323.13:Cyp11a1:protein_coding:2120
samples:
,0:506249,1:248528,2:31318446,3:8029189,4:774696,5:756994,6:12,7:3625,9:7815,14:24895,15:24207,16:20705,17:11821,18:12313,19:9021


chrom: chr9
strand: -
right_annotated: ENSMUSG00000037716.15:Ccdc33:protein_coding:3948
samples:
,0:448841,1:317406,2:11876,3:1594,4:1879,5:2975,6:93284,7:14978,8:56645,9:17983,10:274556,15:2556,17:840,18:2327,19:2994


chrom: chr9
strand: +
right_annotated: ENSMUSG00000032327.14:Stra6:protein_coding:3641
samples:
,0:16508,1:11353,2:191008,3:124322,4:185187,5:299684,6:234967,7:20187,8:41609,9:111061,11:138532,12:20272,13:114040,14:10933,16:281,17:19721,18:5114,19:3656


chrom: chr9
strand: -
right_annotated: ENSMUSG00000037206.15:Islr:protein_coding:2342
samples:
,0:6220,1:5762,2:179479,3:294716,4:170680,5:151215,6:250299,7:23339,8:271681,9:239521,11:360,12:19910,14:72916,15:70147,16:91605,17:137629,18:106152,19:97551


chrom: chr9
strand: -
right_annotated: ENSMUSG00000051243.14:Islr2:protein_coding:4934
samples:
,0:34946,1:18353,2:5354,3:3527,4:13780,5:27415,9:625,14:17922,15:67249,16:100628,17:45426,18:42772,19:81955


chrom: chr9
strand: +
right_annotated: ENSMUSG00000057818.8:1600029O15Rik:transcribed_processed_pseudogene:1809
samples:
,0:1592,1:429,2:369,3:344,4:500,5:1909,6:12254,7:579,8:417,9:1006,10:1357,11:639,12:170,13:90,14:3499,15:3709,16:4586,17:19695,18:8392,19:12280


chrom: chr9
strand: -
right_annotated: ENSMUSG00000036986.16:Pml:protein_coding:5146
samples:
,0:10510,1:7823,2:185032,3:114458,4:87508,5:154842,6:154555,7:11758,8:45874,9:27521,10:5956,11:5128,12:20158,13:4449,14:34686,15:11571,16:13453,17:18692,18:19511,19:6140


chrom: chr9
strand: +
right_annotated: ENSMUSG00000032333.6:Stoml1:protein_coding:1984
samples:
,0:21282,1:13309,2:96974,3:51311,4:68045,5:131182,6:155697,7:18544,8:94188,9:103986,10:24354,11:55567,12:458425,13:42689,14:207292,15:117794,16:201668,17:239581,18:256263,19:199477


chrom: chr9
strand: -
right_annotated: ENSMUSG00000032334.10:Loxl1:protein_coding:3297
samples:
,0:37148,1:29595,2:131394,3:173837,4:140436,5:135006,6:220912,7:78954,8:217464,9:47075,10:169540,11:166413,12:17869,13:36352


chrom: chr9
strand: +
right_annotated: ENSMUSG00000066607.5:6030419C18Rik:protein_coding:2238
samples:
,0:4255,1:4114,2:19019,3:21148,4:9954,5:8760,6:16066,7:1354,8:1310,9:1641,13:1104,14:6138,15:6801,16:6238,17:4958,18:3845,19:6263


chrom: chr9
strand: -
right_annotated: ENSMUSG00000035914.11:Cd276:protein_coding:3604
samples:
,0:2177,1:1499,2:57109,3:29138,4:21619,5:40835,6:375237,7:27825,8:67700,9:125900,10:249065,11:58846,12:119690,13:44896,14:24922,15:38474,16:36287,17:19472,18:3602,19:24538


chrom: chr9
strand: +
right_annotated: ENSMUSG00000032336.17:Nptn:protein_coding:5440
samples:
,0:140059,1:74467,2:653183,3:396120,4:439724,5:721813,6:1761550,7:360961,8:1034370,9:728005,10:1444898,11:2463242,12:372874,13:260583,14:1141262,15:1123283,16:1543394,17:1074611,18:1220095,19:968177


chrom: chr9
strand: -
right_annotated: ENSMUSG00000074269.10:Rec114:protein_coding:883
samples:
,0:7475,1:3839,2:4178,3:3312,4:2153,5:5672,6:6759,7:2048,8:2183,9:2033,10:1959,11:6494,12:568,13:491,14:2933,15:3136,16:3358,17:2471,18:3570,19:1696


chrom: chr9
strand: -
right_annotated: ENSMUSG00000093473.1:Gm20620:processed_pseudogene:168
samples:
,0:34,1:50,2:288,3:133,4:277,5:375,6:7409,7:1546,8:4495,9:3967,10:2193,11:6641,12:548,13:504,14:32,15:38,17:117,19:142


chrom: chr9
strand: +
right_annotated: ENSMUSG00000032338.9:Hcn4:protein_coding:6118
samples:
,0:497,1:193,2:2498,3:1324,4:775,5:1783,6:31690,7:1478,9:15124,11:2271,13:12519,15:577,16:1222,18:480


chrom: chr9
strand: -
right_annotated: ENSMUSG00000032340.8:Neo1:protein_coding:7379
samples:
,0:148463,1:103734,2:895328,3:534563,4:671184,5:1360917,6:558503,7:91397,8:293299,9:162554,10:428026,11:702793,12:65972,13:29904,14:89314,15:68456,16:57164,17:84516,18:21379,19:71868


chrom: chr9
strand: -
right_annotated: ENSMUSG00000066592.3:Gm7589:processed_pseudogene:534
samples:
,0:22872,1:15380,2:154998,3:96777,4:35027,5:42696,6:62658,7:16301,8:50365,9:46771,10:72378,11:37299,12:10324,13:3047,14:3997,15:5071,16:7097,17:4046,18:4862,19:4498


chrom: chr9
strand: +
right_annotated: ENSMUSG00000025236.11:Adpgk:protein_coding:2484
samples:
,0:39746,1:22441,2:341995,3:154736,4:92744,5:171520,6:227105,7:26552,8:53027,9:47916,10:180,11:127954,12:36795,14:23470,15:20455,16:35059,17:51999,18:23533,19:24183


chrom: chr9
strand: -
right_annotated: ENSMUSG00000025235.8:Bbs4:protein_coding:2518
samples:
,0:76657,1:48986,2:117450,3:66489,4:55979,5:90307,6:548726,7:103615,8:333223,9:138582,10:20468,11:181841,12:62989,13:14672,14:249278,15:117322,16:177855,17:199627,18:317853,19:203576


chrom: chr9
strand: -
right_annotated: ENSMUSG00000025234.11:Arih1:protein_coding:6971
samples:
,0:979787,1:598444,2:749650,3:359625,4:300760,5:553571,6:638893,7:124476,8:275223,9:345537,10:124599,11:495026,12:56619,13:140891,14:60472,15:45828,16:57954,17:63656,18:57694,19:50917


chrom: chr9
strand: -
right_annotated: ENSMUSG00000090516.1:Rps11-ps1:processed_pseudogene:475
samples:
,0:11525,1:7397,2:64689,3:48621,4:18266,5:22843,6:526365,7:132211,8:324303,9:246872,10:825097,11:423513,12:62170,13:45723,14:9678,15:7077,16:11627,17:7225,18:10717,19:6975


chrom: chr9
strand: -
right_annotated: ENSMUSG00000049526.8:Tmem202:protein_coding:1256
samples:
,0:145507,1:98349,2:2158,3:2466,4:3421,5:5657,6:1326,7:2514,14:1000,15:6245,16:3906,17:4561,18:9151,19:2876


chrom: chr9
strand: +
right_annotated: ENSMUSG00000025232.8:Hexa:protein_coding:1996
samples:
,0:282397,1:194177,2:451311,3:244230,4:341486,5:637656,6:883711,7:106070,8:375382,9:290590,10:468749,11:876141,12:178398,13:119259,14:137026,15:82467,16:97689,17:105815,18:75012,19:41975


chrom: chr9
strand: +
right_annotated: ENSMUSG00000032297.11:Celf6:protein_coding:3205
samples:
,0:38525,1:24687,3:99,4:100,5:294,6:12396,7:1238,8:9028,14:19121,15:9688,16:13576,17:10777,18:9487,19:7496


chrom: chr9
strand: +
right_annotated: ENSMUSG00000025237.16:Parp6:protein_coding:2709
samples:
,0:89077,1:59718,2:115218,3:47553,4:46800,5:79459,6:288966,7:56361,8:98454,9:115314,10:63950,11:6619,12:208727,13:18048,14:204595,15:131854,16:218930,17:161896,18:113048,19:108473


chrom: chr9
strand: +
right_annotated: ENSMUSG00000032294.17:Pkm:protein_coding:2599
samples:
,0:802121,1:533310,2:2154977,3:1488453,4:1014945,5:1823554,6:3118198,7:341874,8:2270029,9:1851323,10:2542281,11:4009627,12:1681746,13:1351973,14:1791756,15:1108570,16:1899242,17:2117432,18:2328530,19:1808666


chrom: chr9
strand: +
right_annotated: ENSMUSG00000111394.1:AC160637.1:TEC:3887
samples:
,0:95253,1:68259,2:241061,3:167874,4:141196,5:315351,6:205245,7:20363,8:158297,9:912667,10:221862,11:256969,12:135490,13:103279,14:228219,15:144090,16:249205,17:275083,18:310249,19:240586


chrom: chr9
strand: +
right_annotated: ENSMUSG00000074259.10:Gramd2:protein_coding:3941
samples:
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chrom: chr9
strand: -
right_annotated: ENSMUSG00000051705.13:Senp8:protein_coding:3885
samples:
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chrom: chr9
strand: +
right_annotated: ENSMUSG00000039585.15:Myo9a:protein_coding:12252
samples:
,0:588157,1:413041,2:329990,3:181496,4:165706,5:329579,6:3133837,7:539418,8:966591,9:626797,10:833093,11:1156481,12:281088,13:68619,14:147911,15:141649,16:179007,17:128136,18:78719,19:64375


chrom: chr9
strand: -
right_annotated: ENSMUSG00000087239.1:Gm7613:processed_pseudogene:487
samples:
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chrom: chr9
strand: -
right_annotated: ENSMUSG00000110803.1:AC156795.1:antisense_RNA:1387
samples:
,0:8228,1:5313,2:4175,3:2162,4:3225,5:4139,6:13568,7:5207,8:8887,9:8681,10:1183,11:35905,14:9724,15:966,16:2276,17:1989,18:2519,19:970


chrom: chr9
strand: -
right_annotated: ENSMUSG00000085116.1:Gm2735:processed_pseudogene:277
samples:
,0:185,1:194,2:1042,3:632,4:296,5:435,6:4688,7:894,8:3329,9:3465,10:2924,11:1378,12:142,13:577,14:150,15:50,16:321,17:150,18:1142,19:100


chrom: chr9
strand: -
right_annotated: ENSMUSG00000032289.15:Thsd4:protein_coding:9030
samples:
,0:9913,1:7822,2:90575,3:22527,4:36238,5:49076,6:1422039,7:199204,8:658071,9:468707,11:193422,12:1812,15:46,18:607,19:50


chrom: chr9
strand: -
right_annotated: ENSMUSG00000047766.15:Lrrc49:protein_coding:4828
samples:
,0:224320,1:164987,2:111506,3:72809,4:39370,5:54148,6:230453,7:58495,8:410183,9:127628,10:118,11:103364,12:53437,13:93689,14:60738,15:63037,16:92782,17:65530,18:120253,19:90339


chrom: chr9
strand: +
right_annotated: ENSMUSG00000097734.1:B930082K07Rik:lincRNA:2478
samples:
,0:8873,1:6364,2:3807,3:2022,4:2221,5:3574,6:201268,7:8927,8:38085,9:62541,11:182057,12:2484,13:3820,14:7370,15:2864,16:2272,17:2824,18:2075,19:2329


chrom: chr9
strand: +
right_annotated: ENSMUSG00000034839.5:Larp6:protein_coding:2440
samples:
,0:23074,1:17174,2:5555,3:4835,4:14785,5:14454,6:24980,7:2740,8:14123,9:5133,14:48150,15:17013,16:93032,17:126260,18:93085,19:90842


chrom: chr9
strand: +
right_annotated: ENSMUSG00000034485.10:Uaca:protein_coding:4434
samples:
,0:154943,1:98126,2:113609,3:74476,4:53183,5:69959,6:489880,7:70687,8:303103,9:167528,10:5264,11:187833,12:100317,13:79526,14:486,19:41


chrom: chr9
strand: +
right_annotated: ENSMUSG00000032280.16:Tle3:protein_coding:5661
samples:
,0:444790,1:329600,2:202507,3:105106,4:223000,5:344149,6:643701,7:74180,8:99550,9:147756,10:17382,11:50208,12:1763,15:550,19:399


chrom: chr9
strand: -
right_annotated: ENSMUSG00000111635.1:AC126672.2:processed_pseudogene:396
samples:
,0:3743,1:2188,2:39834,3:17127,4:1399,5:10908,6:1035,7:232,8:467,9:430,10:844,11:515,12:60,13:77,14:600,15:400,16:988,17:250,18:650,19:200


chrom: chr9
strand: -
right_annotated: ENSMUSG00000007892.8:Rplp1:protein_coding:499
samples:
,0:179892,1:117275,2:1365407,3:879636,4:417421,5:470209,6:4791494,7:1756636,8:2221629,9:1869333,10:3178514,11:1413073,12:412924,13:256957,14:43829,15:45918,16:60103,17:46743,18:47519,19:40903


chrom: chr9
strand: -
right_annotated: ENSMUSG00000032254.10:Kif23:protein_coding:3398
samples:
,0:132317,1:88801,2:216436,3:192330,4:48994,5:79851,6:130165,7:18709,8:75501,9:62163,10:44,15:100,17:12098,18:337


chrom: chr9
strand: -
right_annotated: ENSMUSG00000032252.14:Glce:protein_coding:4850
samples:
,0:48109,1:30326,2:321013,3:138444,4:156053,5:331577,6:684981,7:108480,8:235630,9:263382,10:1520,11:534229,13:114838,14:18450,15:46835,16:75357,17:108198,18:91135,19:86201


chrom: chr9
strand: -
right_annotated: ENSMUSG00000092696.1:Mir5133:miRNA:77
samples:
,0:223,1:193,2:2135,3:664,4:830,5:1487,6:1521,7:653,8:4964,9:2006,10:677,11:2377,13:145,14:142,15:68,16:226,17:545,18:294,19:332


chrom: chr9
strand: +
right_annotated: ENSMUSG00000032249.14:Anp32a:protein_coding:2290
samples:
,0:33019,1:17294,2:928555,3:488426,4:206253,5:299719,6:311001,7:94430,8:196299,9:140374,10:284291,11:135706,12:2733,13:3027,14:64752,15:48655,16:55539,17:34991,18:31516,19:36265


chrom: chr9
strand: -
right_annotated: ENSMUSG00000041729.15:Coro2b:protein_coding:3610
samples:
,0:5672,1:3628,2:37276,3:12581,4:10634,5:10808,6:64247,7:30925,8:89281,9:13887,10:85546,11:184032,12:888,13:23102,14:111625,15:119077,16:185103,17:115390,18:156076,19:111620


chrom: chr9
strand: +
right_annotated: ENSMUSG00000032243.8:Itga11:protein_coding:4969
samples:
,0:19982,1:11035,2:54429,3:28422,4:10795,5:16571,6:37804,7:5801,8:647,9:5915,10:156047,11:55435,12:114,13:215,15:12481,16:391,17:752,18:3007,19:7590


chrom: chr9
strand: -
right_annotated: ENSMUSG00000032244.9:Fem1b:protein_coding:6785
samples:
,0:885558,1:589393,2:433665,3:245116,4:121559,5:214916,6:771863,7:129633,8:221759,9:129798,10:9381,11:47436,12:64571,13:96643,14:75268,15:80044,16:205393,17:139535,18:147371,19:123474


chrom: chr9
strand: +
right_annotated: ENSMUSG00000032245.12:Cln6:protein_coding:2142
samples:
,0:135109,1:98667,2:91417,3:59982,4:42837,5:61725,6:188161,7:37253,8:102391,9:91383,10:183925,11:261344,12:242817,13:5379,14:14406,15:23143,16:31847,17:7531,18:40714,19:13786


chrom: chr9
strand: -
right_annotated: ENSMUSG00000074250.11:Gm10653:transcribed_processed_pseudogene:1347
samples:
,0:12041,1:9926,2:15191,3:10513,4:6946,5:9195,6:4015,7:3934,8:14068,9:11287,10:26742,11:17017,12:35223,13:828,14:2548,15:3598,16:4410,17:1424,18:4714,19:2692


chrom: chr9
strand: +
right_annotated: ENSMUSG00000032246.14:Calml4:protein_coding:1318
samples:
,0:8819,1:4250,2:19194,3:27972,4:12784,5:11595,6:3121643,7:654946,8:1972304,9:1794314,10:3794884,11:2373341,12:484117,13:423491,16:88,18:823


chrom: chr9
strand: -
right_annotated: ENSMUSG00000032405.10:Pias1:protein_coding:6386
samples:
,0:663932,1:416772,2:265277,3:142415,4:170544,5:288946,6:1718657,7:176686,8:808239,9:505284,10:45042,11:1132503,12:237112,13:116557,14:100542,15:79377,16:217561,17:222894,18:225749,19:155291


chrom: chr9
strand: -
right_annotated: ENSMUSG00000058444.8:Map2k5:protein_coding:2310
samples:
,0:108216,1:70062,2:95254,3:60143,4:40414,5:60521,6:373024,7:55953,8:70509,9:53839,10:223117,11:340296,12:152899,13:73038,14:29973,15:54570,16:106887,17:34862,18:116815,19:93519


chrom: chr9
strand: -
right_annotated: ENSMUSG00000032403.8:2300009A05Rik:protein_coding:595
samples:
,0:85390,1:52679,2:47365,3:18314,4:11058,5:16199,6:227231,7:38183,8:57688,9:46750,10:51439,11:2914,12:6132,13:4172,14:11755,15:5541,16:11811,17:4371,18:15138,19:18103


chrom: chr9
strand: +
right_annotated: ENSMUSG00000086539.8:Gm16759:processed_transcript:5481
samples:
,0:93145,1:59228,2:40187,3:14914,4:11755,5:19258,6:112054,7:19665,8:27553,9:22038,10:16398,12:1245,14:7395,15:5892,16:8177,17:2140,18:8435,19:11100


chrom: chr9
strand: -
right_annotated: ENSMUSG00000091866.1:Gm6257:processed_pseudogene:910
samples:
,0:3775,1:2243,2:6390,3:5884,4:3479,5:7576,6:11471,7:3924,8:18566,9:19713,10:26916,11:8275,13:5809,14:4001,15:1000,16:1205,17:2349,18:2947,19:2590


chrom: chr9
strand: +
right_annotated: ENSMUSG00000037257.8:Aagab:protein_coding:5294
samples:
,0:111616,1:70915,2:494408,3:173445,4:261538,5:623748,6:228659,7:33895,8:273599,9:66743,10:420755,11:732252,12:125783,13:180706,14:158657,15:76893,16:152189,17:159968,18:163689,19:128082


chrom: chr9
strand: -
right_annotated: ENSMUSG00000032402.12:Smad3:protein_coding:5090
samples:
,0:21940,1:14878,2:519176,3:276015,4:312823,5:530474,6:488979,7:43073,8:290442,9:163857,10:2015,11:197197,13:90,14:20141,15:18005,16:41525,17:17348,18:13900,19:9464


chrom: chr9
strand: -
right_annotated: ENSMUSG00000111137.1:AC160337.2:processed_pseudogene:605
samples:
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chrom: chr9
strand: +
right_annotated: ENSMUSG00000110768.1:AC160337.1:processed_pseudogene:538
samples:
,0:60303,1:38020,2:111482,3:59495,4:44277,5:65502,6:97230,7:21433,8:67359,9:59955,10:174283,11:128228,12:43742,13:22370,14:55543,15:32080,16:47925,17:47058,18:60714,19:41357


chrom: chr9
strand: -
right_annotated: ENSMUSG00000036867.7:Smad6:protein_coding:2971
samples:
,0:41537,1:25468,2:94406,3:29402,4:15077,5:13309,6:29887,7:3652,8:6337,9:6245,10:1942,11:2460,12:18918,13:341,15:466,18:234


chrom: chr9
strand: +
right_annotated: ENSMUSG00000032401.15:Lctl:protein_coding:2246
samples:
,0:14430,1:9629,2:17314,3:11675,4:9909,5:12279,6:5177,7:1076,8:2620,10:1925,14:64,15:317,18:1243,19:637


chrom: chr9
strand: -
right_annotated: ENSMUSG00000032400.17:Zwilch:protein_coding:2957
samples:
,0:121171,1:75356,2:99601,3:74590,4:23651,5:41901,6:59428,7:7257,8:46879,9:3141,10:67225,11:13145,13:90,14:1240,15:550,17:326,18:1282,19:5568


chrom: chr9
strand: +
right_annotated: ENSMUSG00000032399.8:Rpl4:protein_coding:1538
samples:
,0:782813,1:469884,2:6671412,3:4414838,4:1638038,5:1991649,6:13588412,7:3151436,8:9992835,9:7714044,10:21532612,11:15092617,12:2935439,13:1636960,14:536310,15:346485,16:555917,17:508111,18:618341,19:475263


chrom: chr9
strand: +
right_annotated: ENSMUSG00000094411.1:Snord16a:snoRNA:99
samples:
,0:373,1:271,2:1786,3:1380,4:436,5:939,6:1463,7:139,9:659,10:13946,11:2387,12:5486,13:2031,16:296,18:616,19:61


chrom: chr9
strand: +
right_annotated: ENSMUSG00000064514.1:Gm22455:snoRNA:71
samples:
,0:117,1:177,2:2074,3:1249,4:578,5:919,6:2169,7:658,8:739,9:1003,12:5221,13:2517,15:112,16:345,17:350,18:414


chrom: chr9
strand: +
right_annotated: ENSMUSG00000032398.7:Snapc5:protein_coding:1228
samples:
,0:35607,1:21488,2:103641,3:60157,4:29894,5:42120,6:361320,7:91559,8:156863,9:134201,10:343588,11:281143,12:84306,13:29615,14:31930,15:25106,16:32684,17:33120,18:27235,19:14727


chrom: chr9
strand: -
right_annotated: ENSMUSG00000004936.8:Map2k1:protein_coding:2436
samples:
,0:28692,1:16171,2:398179,3:392016,4:104535,5:142873,6:2217344,7:321957,8:873864,9:651650,10:744599,11:787500,12:136570,13:149642,14:1122581,15:529542,16:809048,17:1040755,18:678283,19:665291


chrom: chr9
strand: +
right_annotated: ENSMUSG00000035337.3:Uchl4:protein_coding:1162
samples:
,0:102070,1:62111,2:47314,3:30059,4:13927,5:21289,6:102333,7:30931,8:38697,9:47806,10:127978,11:52839,12:12453,13:5785,14:54315,15:19821,16:21088,17:23044,18:25210,19:23821


chrom: chr9
strand: +
right_annotated: ENSMUSG00000032397.7:Tipin:protein_coding:1847
samples:
,0:109542,1:60997,2:148999,3:140969,4:33201,5:45355,6:623997,7:157774,8:226577,9:279159,10:661886,11:738091,12:46704,13:94810,14:58068,15:27276,16:71835,17:45715,18:118297,19:81350


chrom: chr9
strand: -
right_annotated: ENSMUSG00000032396.17:Dis3l:protein_coding:4220
samples:
,0:881177,1:642683,2:184763,3:102291,4:59215,5:84174,6:261510,7:23695,8:44797,9:8838,11:307834,12:30688,13:113458,14:26798,15:51274,16:31409,17:43318,18:50975,19:31713


chrom: chr9
strand: +
right_annotated: ENSMUSG00000036466.17:Megf11:protein_coding:7353
samples:
,0:1406,1:1051,2:5128,3:2634,4:3345,5:8154,6:88686,7:35381,8:68622,9:41137,11:155893,14:7058,15:5553,16:10347,17:16929,18:8669,19:4348


chrom: chr9
strand: -
right_annotated: ENSMUSG00000004771.12:Rab11a:protein_coding:2336
samples:
,0:279122,1:162291,2:850159,3:336190,4:414958,5:842013,6:3528439,7:674547,8:1366735,9:1500518,10:1595649,11:3398730,12:378343,13:157837,14:542442,15:269247,16:579271,17:527816,18:385348,19:252570


chrom: chr9
strand: -
right_annotated: ENSMUSG00000104953.1:AC147560.1:miRNA:107
samples:
,0:41198,1:25352,2:91657,3:37576,4:46190,5:88534,6:251233,7:43470,8:151798,9:143162,10:218065,11:424571,12:33532,13:21858,14:41267,15:20277,16:41137,17:45012,18:31905,19:27381


chrom: chr9
strand: +
right_annotated: ENSMUSG00000053641.9:Dennd4a:protein_coding:8645
samples:
,0:104018,1:60487,2:145196,3:80093,4:95034,5:151905,6:391105,7:84972,8:66255,9:47787,10:344758,11:561730,12:34619,13:180,14:73540,15:71606,16:114394,17:91542,18:137268,19:46697


chrom: chr9
strand: +
right_annotated: ENSMUSG00000034263.13:Ints14:protein_coding:3139
samples:
,0:107596,1:74101,2:249875,3:142841,4:73295,5:123876,6:322740,7:30831,8:210508,9:174209,10:814621,11:793121,12:32460,13:56798,14:42985,15:41472,16:49992,17:38481,18:59538,19:41672


chrom: chr9
strand: -
right_annotated: ENSMUSG00000033629.6:Hacd3:protein_coding:2709
samples:
,0:151318,1:87227,2:1644122,3:483033,4:404834,5:765006,6:2697806,7:434859,8:1492875,9:920151,10:3413670,11:4831043,12:972464,13:450853,14:634604,15:389372,16:556627,17:603799,18:386419,19:272168


chrom: chr9
strand: +
right_annotated: ENSMUSG00000032393.15:Dpp8:protein_coding:5013
samples:
,0:507181,1:326394,2:619270,3:310966,4:190132,5:313422,6:351865,7:48464,8:34556,9:55885,10:4895,11:207495,12:11560,14:91527,15:86588,16:126429,17:140163,18:96225,19:102565


chrom: chr9
strand: -
right_annotated: ENSMUSG00000111471.1:AC122463.1:antisense_RNA:597
samples:
,0:21610,1:14476,2:26002,3:11216,4:7680,5:13574,6:14272,7:1831,8:4204,9:5137,11:23374,12:1160,14:5457,15:5087,16:6140,17:8756,18:5176,19:5853


chrom: chr9
strand: +
right_annotated: ENSMUSG00000032816.15:Igdcc4:protein_coding:6366
samples:
,0:17191,1:8547,2:215785,3:177262,4:56555,5:60771,6:256682,7:42021,8:56617,9:40268,10:358907,11:108127,12:96415,13:2896,14:1907,15:14002,16:14077,17:18808,18:17532,19:18093


chrom: chr9
strand: +
right_annotated: ENSMUSG00000032394.6:Igdcc3:protein_coding:3206
samples:
,0:507,1:446,2:4988,3:5712,4:2292,5:963,6:197496,7:16512,8:43645,9:20161,10:108803,11:5324,12:490,13:30673,16:50,18:471,19:100


chrom: chr9
strand: +
right_annotated: ENSMUSG00000032392.11:Parp16:protein_coding:2815
samples:
,0:9326,1:5862,2:57136,3:41433,4:34795,5:48372,6:90629,7:8608,8:35093,9:37613,10:175499,11:187264,12:35132,13:5084,14:4631,15:2347,16:3857,17:58,18:3849,19:9650


chrom: chr9
strand: +
right_annotated: ENSMUSG00000015357.10:Clpx:protein_coding:2886
samples:
,0:724049,1:462269,2:344264,3:162070,4:113554,5:177406,6:618841,7:98810,8:353678,9:197574,10:30964,11:369349,12:100541,13:30423,14:125571,15:64830,16:50932,17:109287,18:195726,19:145962


chrom: chr9
strand: +
right_annotated: ENSMUSG00000041837.4:Pdcd7:protein_coding:2419
samples:
,0:102168,1:59948,2:169610,3:85021,4:76236,5:139254,6:151142,7:30169,8:20260,9:37362,10:5772,11:405308,12:9197,13:28073,14:9178,15:18165,16:25302,17:33030,18:17422,19:9739


chrom: chr9
strand: +
right_annotated: ENSMUSG00000059183.12:Mtfmt:protein_coding:2042
samples:
,0:16929,1:12019,2:57112,3:29231,4:23808,5:48859,6:150813,7:19657,8:55071,9:62230,10:83735,11:232987,12:510,14:24027,15:10033,16:29524,17:15090,18:28823,19:22124


chrom: chr9
strand: +
right_annotated: ENSMUSG00000032388.7:Spg21:protein_coding:2946
samples:
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chrom: chr9
strand: -
right_annotated: ENSMUSG00000050721.9:Plekho2:protein_coding:3273
samples:
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chrom: chr9
strand: +
right_annotated: ENSMUSG00000032387.15:Rbpms2:protein_coding:2064
samples:
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chrom: chr9
strand: +
right_annotated: ENSMUSG00000040652.16:Oaz2:protein_coding:2035
samples:
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chrom: chr9
strand: -
right_annotated: ENSMUSG00000040524.9:Zfp609:protein_coding:7777
samples:
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chrom: chr9
strand: -
right_annotated: ENSMUSG00000032386.15:Trip4:protein_coding:7158
samples:
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chrom: chr9
strand: +
right_annotated: ENSMUSG00000040204.6:Pclaf:protein_coding:2188
samples:
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chrom: chr9
strand: +
right_annotated: ENSMUSG00000032384.16:Csnk1g1:protein_coding:7798
samples:
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chrom: chr9
strand: +
right_annotated: ENSMUSG00000032383.7:Ppib:protein_coding:892
samples:
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chrom: chr9
strand: -
right_annotated: ENSMUSG00000039452.6:Snx22:protein_coding:2543
samples:
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chrom: chr9
strand: -
right_annotated: ENSMUSG00000032382.14:Snx1:protein_coding:2073
samples:
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chrom: chr9
strand: +
right_annotated: ENSMUSG00000032381.5:Fam96a:protein_coding:1240
samples:
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chrom: chr9
strand: +
right_annotated: ENSMUSG00000032380.8:Dapk2:protein_coding:1772
samples:
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chrom: chr9
strand: +
right_annotated: ENSMUSG00000038664.16:Herc1:protein_coding:15153
samples:
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chrom: chr9
strand: -
right_annotated: ENSMUSG00000100130.1:Gm28379:antisense_RNA:3157
samples:
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chrom: chr9
strand: -
right_annotated: ENSMUSG00000050503.8:Fbxl22:protein_coding:3935
samples:
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chrom: chr9
strand: -
right_annotated: ENSMUSG00000032376.12:Usp3:protein_coding:5607
samples:
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chrom: chr9
strand: +
right_annotated: ENSMUSG00000032373.15:Car12:protein_coding:3716
samples:
,0:3217,1:2086,2:12893,3:47053,4:9196,5:19743,6:500186,7:69128,8:254353,9:122595,11:146797,12:760,13:5382,15:6049,16:5046,18:282,19:2747


chrom: chr9
strand: -
right_annotated: ENSMUSG00000032375.15:Aph1b:protein_coding:4910
samples:
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chrom: chr9
strand: -
right_annotated: ENSMUSG00000059237.6:Ppp1r2-ps4:processed_pseudogene:633
samples:
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chrom: chr9
strand: -
right_annotated: ENSMUSG00000053040.13:Aph1c:protein_coding:5205
samples:
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chrom: chr9
strand: -
right_annotated: ENSMUSG00000036943.9:Rab8b:protein_coding:4733
samples:
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chrom: chr9
strand: +
right_annotated: ENSMUSG00000036781.13:Rps27l:protein_coding:580
samples:
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chrom: chr9
strand: -
right_annotated: ENSMUSG00000032370.8:Lactb:protein_coding:2036
samples:
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chrom: chr9
strand: -
right_annotated: ENSMUSG00000032366.15:Tpm1:protein_coding:4780
samples:
,0:57045,1:33308,2:1775692,3:895952,4:513684,5:666788,6:3636061,7:532328,8:1102972,9:976479,10:1404601,11:3567902,12:1661416,13:1416289,14:269667,15:144949,16:290191,17:203942,18:223855,19:195857


chrom: chr9
strand: -
right_annotated: ENSMUSG00000052698.15:Tln2:protein_coding:12491
samples:
,0:827985,1:587917,2:177893,3:80923,4:98720,5:197287,6:603030,7:67439,8:314773,9:162838,10:34896,11:33186,12:3350,14:132754,15:85288,16:115394,17:40726,18:89156,19:67806


chrom: chr9
strand: -
right_annotated: ENSMUSG00000111272.1:CT573422.1:processed_pseudogene:688
samples:
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chrom: chr9
strand: -
right_annotated: ENSMUSG00000055125.7:M5C1000I18Rik:lincRNA:1414
samples:
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chrom: chr9
strand: +
right_annotated: ENSMUSG00000091956.2:C2cd4b:protein_coding:1327
samples:
,0:30387,1:22282,3:515,4:3865,5:7794,6:15568,7:2350,8:9127,9:6810,11:713,12:505,13:102,14:2757,15:437,16:1239,17:1978,18:2910,19:4023


chrom: chr9
strand: +
right_annotated: ENSMUSG00000035284.10:Vps13c:protein_coding:11527
samples:
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chrom: chr9
strand: +
right_annotated: ENSMUSG00000032238.17:Rora:protein_coding:11245
samples:
,0:144600,1:77247,2:573354,3:147021,4:112105,5:262594,6:597804,7:82874,8:88765,9:166447,10:80852,11:534498,12:183640,13:113571,14:10901,15:18146,16:41071,17:75253,18:59644,19:40270


chrom: chr9
strand: -
right_annotated: ENSMUSG00000086648.1:Gm15511:antisense_RNA:557
samples:
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chrom: chr9
strand: +
right_annotated: ENSMUSG00000032235.15:Ice2:protein_coding:4756
samples:
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chrom: chr9
strand: -
right_annotated: ENSMUSG00000111621.1:CT009708.2:processed_pseudogene:262
samples:
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chrom: chr9
strand: -
right_annotated: ENSMUSG00000062874.6:Gm4978:processed_pseudogene:801
samples:
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chrom: chr9
strand: +
right_annotated: ENSMUSG00000032231.14:Anxa2:protein_coding:1447
samples:
,0:193150,1:111020,2:1680897,3:1049962,4:1043112,5:1722481,6:4633514,7:574093,8:2974707,9:2383089,10:11122776,11:8640595,12:686343,13:469354,16:777,19:1655


chrom: chr9
strand: -
right_annotated: ENSMUSG00000101555.1:Gm28731:antisense_RNA:1569
samples:
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chrom: chr9
strand: +
right_annotated: ENSMUSG00000011958.17:Bnip2:protein_coding:2804
samples:
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chrom: chr9
strand: +
right_annotated: ENSMUSG00000033543.17:Gtf2a2:protein_coding:1184
samples:
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chrom: chr9
strand: -
right_annotated: ENSMUSG00000032226.5:Gcnt3:protein_coding:4301
samples:
,0:60361,1:40365,2:100,3:149,4:843,5:899,6:6541,7:2795,8:15211,10:35,11:4711,12:35,15:4293,16:32,19:681


chrom: chr9
strand: -
right_annotated: ENSMUSG00000032224.15:Fam81a:protein_coding:3703
samples:
,0:1784,1:1232,2:109643,3:93108,4:4679,5:7393,6:848991,7:82062,8:285054,9:135472,10:38,11:28,12:35,13:1018,14:763403,15:478139,16:766632,17:738469,18:946057,19:593538


chrom: chr9
strand: +
right_annotated: ENSMUSG00000032220.10:Myo1e:protein_coding:4625
samples:
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chrom: chr9
strand: -
right_annotated: ENSMUSG00000032218.7:Ccnb2:protein_coding:1531
samples:
,0:393676,1:274686,2:160337,3:140119,4:19326,5:21530,6:63241,7:12392,8:32367,9:79377,11:12069,15:891,16:2099,18:774,19:368


chrom: chr9
strand: -
right_annotated: ENSMUSG00000032217.13:Rnf111:protein_coding:5256
samples:
,0:76414,1:53218,2:207602,3:107717,4:103100,5:213131,6:727121,7:217261,8:196248,9:183357,10:185083,11:113433,12:180583,13:2138,14:30416,15:35589,16:60406,17:31283,18:44628,19:47151


chrom: chr9
strand: +
right_annotated: ENSMUSG00000032212.10:Sltm:protein_coding:3809
samples:
,0:878063,1:529799,2:396686,3:234748,4:116327,5:187881,6:1364696,7:257607,8:690129,9:609147,10:627349,11:1326560,12:98931,13:264935,14:46904,15:69070,16:89266,17:121592,18:156103,19:83603


chrom: chr9
strand: -
right_annotated: ENSMUSG00000042444.10:Mindy2:protein_coding:8081
samples:
,0:31187,1:16539,2:156295,3:60017,4:42993,5:65879,6:1309986,7:245348,8:415693,9:173085,10:210812,11:591528,12:4689,14:75146,15:64034,16:55335,17:69486,18:15812,19:18311


chrom: chr9
strand: +
right_annotated: ENSMUSG00000074213.2:Gm10642:protein_coding:1610
samples:
,0:3518,1:1575,2:11451,3:3424,4:4505,5:4086,6:35586,7:2442,8:8449,9:8282,11:10795,12:1259,14:6800,15:2052,16:5049,17:12875,18:1915,19:1290


chrom: chr9
strand: +
right_annotated: ENSMUSG00000054693.14:Adam10:protein_coding:4593
samples:
,0:95177,1:55699,2:894319,3:583850,4:548660,5:1077954,6:9537339,7:1387829,8:3459832,9:2725314,10:1781575,11:1750504,12:474625,13:201699,14:95274,15:83625,16:160287,17:114698,18:168812,19:124446


chrom: chr9
strand: +
right_annotated: ENSMUSG00000096160.2:Gm3436:processed_pseudogene:840
samples:
,0:41134,1:30794,2:53214,3:37898,4:32618,5:57307,6:9198,7:1440,8:4321,9:8131,10:18205,11:37503,12:19755,13:5469,14:44909,15:18464,16:31133,17:46547,18:53593,19:29863


chrom: chr9
strand: +
right_annotated: ENSMUSG00000013584.5:Aldh1a2:protein_coding:2264
samples:
,0:321499,1:202053,2:261052,3:301524,4:124144,5:131709,6:327107,7:52942,8:225527,9:15962,16:49,18:366


chrom: chr9
strand: -
right_annotated: ENSMUSG00000032199.12:Polr2m:protein_coding:2424
samples:
,0:136615,1:80161,2:619932,3:364617,4:287729,5:471674,6:1092068,7:195087,8:226740,9:268088,10:180390,11:1010944,12:323531,13:19150,14:390955,15:260622,16:371370,17:359676,18:347346,19:286798


chrom: chr9
strand: -
right_annotated: ENSMUSG00000092137.7:Gcom1:protein_coding:1726
samples:
,0:39621,1:23388,2:134583,3:99641,4:122622,5:214153,6:169372,7:31045,8:43300,9:43578,10:128604,11:185087,12:111244,13:68918,14:94476,15:65521,16:91721,17:85603,18:83647,19:67474


chrom: chr9
strand: -
right_annotated: ENSMUSG00000041361.13:Myzap:protein_coding:2283
samples:
,0:21682,1:12402,2:27411,3:38006,4:100347,5:207067,6:105389,7:17884,8:28524,9:14205,10:167779,11:103647,12:68795,13:97140,16:23,18:315


chrom: chr9
strand: -
right_annotated: ENSMUSG00000032232.14:Cgnl1:protein_coding:7231
samples:
,0:162906,1:98727,2:303773,3:362902,4:547594,5:794974,6:380472,7:76540,8:171232,9:112328,10:232447,11:95152,12:10893,15:1900,16:935,18:2343,19:100


chrom: chr9
strand: -
right_annotated: ENSMUSG00000032228.16:Tcf12:protein_coding:6790
samples:
,0:72281,1:38213,2:604757,3:332615,4:206161,5:340780,6:1492422,7:292299,8:356160,9:157954,10:475679,11:477473,12:30464,13:63036,14:30039,15:8524,16:8838,17:10302,18:10307,19:5314


chrom: chr9
strand: -
right_annotated: ENSMUSG00000102143.1:Gm38057:TEC:3203
samples:
,0:1248,1:150,2:12337,3:5359,4:5214,5:10587,6:82581,7:7812,8:33549,9:36882,10:74,11:44933,13:15,16:348,19:1950


chrom: chr9
strand: +
right_annotated: ENSMUSG00000098761.1:Gm18821:processed_pseudogene:709
samples:
,0:4020,1:2033,2:11037,3:6189,4:2277,5:4335,6:2133,7:1502,8:853,9:763,10:285,11:558,12:50,14:2048,15:698,16:1500,17:2300,18:1400,19:797


chrom: chr9
strand: +
right_annotated: ENSMUSG00000098915.1:Rpl15-ps2:processed_pseudogene:613
samples:
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chrom: chr9
strand: +
right_annotated: ENSMUSG00000099253.1:Gm7863:processed_pseudogene:805
samples:
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chrom: chr9
strand: -
right_annotated: ENSMUSG00000061390.6:Gm7866:processed_pseudogene:379
samples:
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chrom: chr9
strand: +
right_annotated: ENSMUSG00000098412.1:Gm7870:processed_pseudogene:616
samples:
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chrom: chr9
strand: +
right_annotated: ENSMUSG00000038535.17:Zfp280d:protein_coding:5968
samples:
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chrom: chr9
strand: +
right_annotated: ENSMUSG00000098492.1:Gm19353:processed_pseudogene:445
samples:
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chrom: chr9
strand: -
right_annotated: ENSMUSG00000098893.1:Gm17828:processed_pseudogene:799
samples:
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chrom: chr9
strand: +
right_annotated: ENSMUSG00000103388.1:Gm37581:TEC:988
samples:
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chrom: chr9
strand: -
right_annotated: ENSMUSG00000097211.2:BC065403:antisense_RNA:1867
samples:
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chrom: chr9
strand: -
right_annotated: ENSMUSG00000099019.1:Gm27254:processed_pseudogene:517
samples:
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chrom: chr9
strand: +
right_annotated: ENSMUSG00000032221.14:Mns1:protein_coding:5250
samples:
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chrom: chr9
strand: +
right_annotated: ENSMUSG00000103445.1:Gm36948:TEC:3247
samples:
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chrom: chr9
strand: -
right_annotated: ENSMUSG00000090626.9:Tex9:protein_coding:4238
samples:
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chrom: chr9
strand: +
right_annotated: ENSMUSG00000037674.15:Rfx7:protein_coding:8648
samples:
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chrom: chr9
strand: +
right_annotated: ENSMUSG00000102672.1:Gm37105:TEC:2085
samples:
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chrom: chr9
strand: -
right_annotated: ENSMUSG00000099051.1:Gm27241:antisense_RNA:794
samples:
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chrom: chr9
strand: -
right_annotated: ENSMUSG00000098573.1:Gm27232:antisense_RNA:597
samples:
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chrom: chr9
strand: +
right_annotated: ENSMUSG00000032216.14:Nedd4:protein_coding:9177
samples:
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chrom: chr9
strand: +
right_annotated: ENSMUSG00000104273.1:A530064N14Rik:TEC:1492
samples:
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chrom: chr9
strand: +
right_annotated: ENSMUSG00000102411.1:Gm36936:TEC:2749
samples:
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chrom: chr9
strand: +
right_annotated: ENSMUSG00000036030.9:Prtg:protein_coding:9148
samples:
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chrom: chr9
strand: +
right_annotated: ENSMUSG00000034910.5:Pygo1:protein_coding:7916
samples:
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chrom: chr9
strand: +
right_annotated: ENSMUSG00000092192.7:Dyx1c1:protein_coding:1975
samples:
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chrom: chr9
strand: +
right_annotated: ENSMUSG00000089865.2:Gm44503:protein_coding:4383
samples:
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chrom: chr9
strand: -
right_annotated: ENSMUSG00000102797.1:Gm37710:TEC:1274
samples:
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chrom: chr9
strand: -
right_annotated: ENSMUSG00000086158.2:Ccpg1os:protein_coding:711
samples:
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chrom: chr9
strand: +
right_annotated: ENSMUSG00000034563.16:Ccpg1:protein_coding:4097
samples:
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chrom: chr9
strand: -
right_annotated: ENSMUSG00000079469.10:Pigb:protein_coding:5059
samples:
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chrom: chr9
strand: +
right_annotated: ENSMUSG00000098332.2:2310009A05Rik:processed_transcript:496
samples:
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chrom: chr9
strand: +
right_annotated: ENSMUSG00000032202.11:Rab27a:protein_coding:3168
samples:
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chrom: chr9
strand: +
right_annotated: ENSMUSG00000092310.2:Gm20509:protein_coding:1016
samples:
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chrom: chr9
strand: +
right_annotated: ENSMUSG00000032215.15:Rsl24d1:protein_coding:1706
samples:
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chrom: chr9
strand: -
right_annotated: ENSMUSG00000062151.13:Unc13c:protein_coding:8796
samples:
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chrom: chr9
strand: +
right_annotated: ENSMUSG00000034858.16:Fam214a:protein_coding:4610
samples:
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chrom: chr9
strand: +
right_annotated: ENSMUSG00000007656.13:Arpp19:protein_coding:4449
samples:
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chrom: chr9
strand: -
right_annotated: ENSMUSG00000111027.1:CT033761.1:processed_pseudogene:694
samples:
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chrom: chr9
strand: +
right_annotated: ENSMUSG00000034593.16:Myo5a:protein_coding:11783
samples:
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chrom: chr9
strand: -
right_annotated: ENSMUSG00000090001.1:Gm9719:processed_pseudogene:543
samples:
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chrom: chr9
strand: +
right_annotated: ENSMUSG00000033590.8:Myo5c:protein_coding:6727
samples:
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chrom: chr9
strand: +
right_annotated: ENSMUSG00000032192.9:Gnb5:protein_coding:2333
samples:
,0:12669,1:5589,2:168459,3:121805,4:38740,5:56949,6:308581,7:57763,8:340334,9:260265,10:240194,11:337974,12:79333,13:54132,14:684890,15:421532,16:595127,17:490478,18:451299,19:370472


chrom: chr9
strand: -
right_annotated: ENSMUSG00000111348.1:AC133947.2:antisense_RNA:1377
samples:
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chrom: chr9
strand: -
right_annotated: ENSMUSG00000042688.16:Mapk6:protein_coding:4232
samples:
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chrom: chr9
strand: +
right_annotated: ENSMUSG00000042487.6:Leo1:protein_coding:2180
samples:
,0:144075,1:88038,2:156890,3:107541,4:87421,5:167087,6:301437,7:39012,8:187604,9:141370,10:452913,11:56057,12:61345,13:48187,14:77812,15:38246,16:80463,17:67578,18:91086,19:86693


chrom: chr9
strand: +
right_annotated: ENSMUSG00000109032.1:Gm7972:transcribed_unprocessed_pseudogene:3237
samples:
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chrom: chr9
strand: -
right_annotated: ENSMUSG00000058587.9:Tmod3:protein_coding:4146
samples:
,0:63736,1:36409,2:522797,3:269151,4:310363,5:532262,6:449737,7:100472,8:433202,9:124377,10:379973,11:437524,12:191972,13:4217,14:205835,15:65872,16:80590,17:155597,18:169241,19:111868


chrom: chr9
strand: -
right_annotated: ENSMUSG00000032186.15:Tmod2:protein_coding:11244
samples:
,0:346441,1:234403,2:29369,3:7736,4:25869,5:32706,6:387522,7:64289,8:130398,9:71262,10:380826,11:535195,12:23629,13:86018,14:911788,15:708128,16:1064954,17:899290,18:801275,19:765127


chrom: chr9
strand: +
right_annotated: ENSMUSG00000032184.5:Lysmd2:protein_coding:1189
samples:
,0:5675,1:3199,2:79734,3:51100,4:48627,5:79261,6:140619,7:24772,8:50404,9:16818,10:122871,11:137423,12:43332,13:9193,14:160175,15:87596,16:156632,17:205825,18:122940,19:111750


chrom: chr9
strand: -
right_annotated: ENSMUSG00000032181.7:Scg3:protein_coding:2384
samples:
,0:2739,1:3169,2:16343,3:8844,4:11150,5:20086,6:199190,7:43599,8:131124,9:84354,10:369382,11:93206,12:81678,13:19022,14:756321,15:468753,16:663733,17:672316,18:728630,19:568616


chrom: chr9
strand: -
right_annotated: ENSMUSG00000098232.1:Gm3671:processed_pseudogene:1007
samples:
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chrom: chr9
strand: -
right_annotated: ENSMUSG00000097836.1:Gm26903:antisense_RNA:4583
samples:
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chrom: chr9
strand: +
right_annotated: ENSMUSG00000007908.14:Hmgcll1:protein_coding:3737
samples:
,0:5439,1:2820,2:6732,3:3539,4:2064,5:1294,6:52215,7:22808,8:45809,9:20604,10:180,11:227213,12:13327,13:41285,14:60331,15:22333,16:66991,17:49833,18:25604,19:25629


chrom: chr9
strand: -
right_annotated: ENSMUSG00000032352.16:Lrrc1:protein_coding:4089
samples:
,0:573458,1:392551,2:231817,3:99650,4:144590,5:223268,6:365361,7:46777,8:144187,9:71966,10:497469,11:209078,12:129297,13:108434,14:816,15:5022,16:4702,18:466,19:668


chrom: chr9
strand: +
right_annotated: ENSMUSG00000099094.1:Gm19569:processed_transcript:1305
samples:
,0:5835,1:2881,2:7308,3:2593,4:3085,5:5249,6:82886,7:2552,8:18916,9:4561,10:90,12:126,14:1933,16:3532


chrom: chr9
strand: +
right_annotated: ENSMUSG00000044938.8:Klhl31:protein_coding:6494
samples:
,0:15314,1:10214,2:83282,3:66852,4:9539,5:11288,6:8533,7:1314,8:3454,9:1071,10:752,11:906,12:1521,13:2762,14:548,15:171,16:1875,17:71,18:201,19:285


chrom: chr9
strand: +
right_annotated: ENSMUSG00000032350.9:Gclc:protein_coding:3423
samples:
,0:115697,1:63776,2:344430,3:228277,4:73338,5:127581,6:821036,7:130586,8:146112,9:215063,10:88,11:165334,12:8465,13:33753,14:16859,15:20688,16:51705,17:24009,18:64649,19:35910


chrom: chr9
strand: +
right_annotated: ENSMUSG00000032349.13:Elovl5:protein_coding:2782
samples:
,0:176686,1:100646,2:4599806,3:689177,4:506826,5:842001,6:1214180,7:217665,8:372823,9:315898,10:346332,11:267854,12:242464,13:98367,14:7693,15:10705,16:32325,17:9567,18:25280,19:14644


chrom: chr9
strand: -
right_annotated: ENSMUSG00000001366.14:Fbxo9:protein_coding:2574
samples:
,0:107543,1:67170,2:208340,3:103041,4:116938,5:188756,6:374435,7:84809,8:210513,9:131241,10:96250,11:115763,12:143274,13:4318,14:286749,15:173128,16:275907,17:356005,18:73528,19:54141


chrom: chr9
strand: +
right_annotated: ENSMUSG00000009828.15:Ick:protein_coding:8336
samples:
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chrom: chr9
strand: -
right_annotated: ENSMUSG00000065037.1:Rn7sk:misc_RNA:331
samples:
,0:5316,1:2346,2:15075,3:4819,4:2764,5:4734,6:69299,7:10168,8:30692,9:22310,10:74501,11:42133,13:180,14:3755,15:2941,16:3541,17:1298,18:3516,19:1406


chrom: chr9
strand: +
right_annotated: ENSMUSG00000097574.1:C920006O11Rik:lincRNA:1444
samples:
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chrom: chr9
strand: +
right_annotated: ENSMUSG00000032348.6:Gsta4:protein_coding:977
samples:
,0:122694,1:63554,2:254592,3:232675,4:673435,5:1306834,6:2249169,7:371053,8:2316605,9:1691560,10:3913470,11:2215556,12:500394,13:518384,14:68309,15:41244,16:68740,17:111435,18:54514,19:39885


chrom: chr9
strand: +
right_annotated: ENSMUSG00000074183.3:Gsta1:protein_coding:875
samples:
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chrom: chr9
strand: -
right_annotated: ENSMUSG00000032344.17:Mb21d1:protein_coding:4082
samples:
,0:30274,1:15933,2:20430,3:11370,4:6134,5:9941,6:1151,7:236,8:64,11:36,13:119,14:4393,15:83,16:4497,18:880


chrom: chr9
strand: -
right_annotated: ENSMUSG00000090317.1:Gm17324:protein_coding:922
samples:
,0:7196,1:4180,2:7216,3:3641,4:2209,5:3937,9:431,10:16748,12:2626,14:6932,15:1267,16:7924,17:6366,18:7489,19:5832


chrom: chr9
strand: +
right_annotated: ENSMUSG00000032342.13:Mto1:protein_coding:2366
samples:
,0:58428,1:38063,2:112375,3:56590,4:30638,5:53677,6:19238,7:16759,8:38623,9:14687,10:37040,11:1858,12:32819,14:110141,15:38594,16:127950,17:86195,18:72547,19:62308


chrom: chr9
strand: -
right_annotated: ENSMUSG00000037742.14:Eef1a1:protein_coding:1794
samples:
,0:3882575,1:2467348,2:21075842,3:14249253,4:6346215,5:7754517,6:48138053,7:9526217,8:28197020,9:23095212,10:62915638,11:74537309,12:10275870,13:5813374,14:775710,15:518819,16:830490,17:638422,18:577897,19:574787


chrom: chr9
strand: -
right_annotated: ENSMUSG00000076138.1:Gm26377:miRNA:108
samples:
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chrom: chr9
strand: -
right_annotated: ENSMUSG00000049624.14:Slc17a5:protein_coding:3236
samples:
,0:7365,1:4510,2:101108,3:40156,4:33592,5:53760,6:220992,7:39425,8:23724,9:143236,10:22780,11:350000,12:12862,13:78568,14:82257,15:42749,16:119005,17:75752,18:109088,19:59697


chrom: chr9
strand: -
right_annotated: ENSMUSG00000059422.5:Gm8116:processed_pseudogene:1201
samples:
,0:87738,1:52976,2:167517,3:72369,4:68647,5:140042,6:117771,7:29875,8:21955,9:32055,15:1632,16:4251,17:5878,18:5580,19:4488


chrom: chr9
strand: +
right_annotated: ENSMUSG00000111336.1:AC160338.2:processed_pseudogene:753
samples:
,0:9725,1:5704,2:27181,3:23136,4:8818,5:14098,6:1822,7:108,8:589,9:769,10:939,11:755,12:413,14:31083,15:15620,16:31331,17:37406,18:33596,19:28931


chrom: chr9
strand: -
right_annotated: ENSMUSG00000032332.17:Col12a1:protein_coding:12154
samples:
,0:46920,1:31675,2:109023,3:133509,4:119907,5:119926,6:135946,7:19319,8:19135,9:3677,10:6,11:4662,14:20950,15:20834,16:26321,17:22402,18:19521,19:19085


chrom: chr9
strand: -
right_annotated: ENSMUSG00000032330.7:Cox7a2:protein_coding:659
samples:
,0:418695,1:253637,2:508886,3:327536,4:108081,5:159019,6:1180735,7:316697,8:866023,9:548176,10:2042073,11:926991,12:215345,13:161575,14:279219,15:145080,16:256077,17:258070,18:297108,19:201966


chrom: chr9
strand: -
right_annotated: ENSMUSG00000032328.12:Tmem30a:protein_coding:3735
samples:
,0:455820,1:289925,2:1131391,3:500277,4:317942,5:553835,6:1462269,7:410459,8:269271,9:329129,10:416209,11:1111835,12:111345,13:82071,14:997454,15:558624,16:1114023,17:967846,18:991384,19:740885


chrom: chr9
strand: +
right_annotated: ENSMUSG00000086918.1:4930429F24Rik:lincRNA:1520
samples:
,0:22640,1:12972,2:2639,3:4158,4:6050,5:12563,6:25164,7:4127,8:3109,9:17874,11:187273,12:18563,13:270,17:438


chrom: chr9
strand: -
right_annotated: ENSMUSG00000034898.16:Filip1:protein_coding:4640
samples:
,0:65106,1:43776,2:27543,3:34077,4:63452,5:121815,6:70895,7:17878,8:80829,9:143387,11:56954,12:13924,13:8002,19:1969


chrom: chr9
strand: +
right_annotated: ENSMUSG00000034252.14:Senp6:protein_coding:5132
samples:
,0:318202,1:202069,2:696462,3:334155,4:256439,5:450488,6:1624176,7:359598,8:577614,9:450646,10:808034,11:1106986,12:39136,13:127659,14:61273,15:54540,16:77132,17:52904,18:44585,19:65196


chrom: chr9
strand: -
right_annotated: ENSMUSG00000084917.3:Gm17477:antisense_RNA:2581
samples:
,0:7008,1:4280,2:23226,3:10404,4:7933,5:16471,6:253694,7:95133,8:119052,9:60319,10:17124,11:54774,13:3030,14:1938,15:556,16:1889,17:1555,18:2330,19:1627


chrom: chr9
strand: +
right_annotated: ENSMUSG00000033577.18:Myo6:protein_coding:7972
samples:
,0:86580,1:51476,2:572105,3:530074,4:293167,5:611877,6:5754928,7:1033875,8:2422159,9:1861930,10:2589760,11:2995497,12:654234,13:247232,14:4233,15:110,18:1638,19:1087


chrom: chr9
strand: +
right_annotated: ENSMUSG00000079225.3:Gm9531:transcribed_processed_pseudogene:1080
samples:
,0:156518,1:92041,2:588761,3:302245,4:217371,5:410907,6:420571,7:104276,8:138203,9:132047,10:148908,11:311975,12:20481,13:9520,14:24931,15:19599,16:34941,17:39324,18:22472,19:25817


chrom: chr9
strand: +
right_annotated: ENSMUSG00000081273.1:Gm15896:processed_pseudogene:440
samples:
,0:250,2:312,3:586,4:180,5:150,6:10513,7:2754,8:10537,9:7241,10:8602,11:6482,12:771,13:430,14:47,17:540


chrom: chr9
strand: +
right_annotated: ENSMUSG00000032251.12:Irak1bp1:protein_coding:2158
samples:
,0:195458,1:125918,2:49394,3:29308,4:25624,5:39640,6:174494,7:24560,8:39832,9:31879,10:25048,11:86808,12:2068,13:2856,14:48001,15:15184,16:36707,17:37228,18:60158,19:51819


chrom: chr9
strand: -
right_annotated: ENSMUSG00000032253.13:Phip:protein_coding:10756
samples:
,0:84475,1:47206,2:784580,3:459741,4:304172,5:566662,6:3182594,7:666619,8:1061623,9:720275,10:110786,11:1198841,12:64553,13:81005,14:152914,15:103512,16:127854,17:156120,18:158842,19:95534


chrom: chr9
strand: -
right_annotated: ENSMUSG00000066456.14:Hmgn3:protein_coding:1546
samples:
,0:12539,1:6105,2:78274,3:51055,4:28757,5:44468,6:2374764,7:671024,8:1299011,9:1052723,10:521860,11:522478,12:140003,13:33484,14:138899,15:44034,16:104433,17:78978,18:269468,19:120269


chrom: chr9
strand: +
right_annotated: ENSMUSG00000102882.1:Gm2065:TEC:2757
samples:
,0:651,1:337,2:3692,3:2182,4:1378,5:2558,6:39977,7:13626,8:32149,9:23077,10:12676,11:8225,12:2569,13:678,14:8024,15:2296,16:2395,17:1934,18:6675,19:3189


chrom: chr9
strand: +
right_annotated: ENSMUSG00000101144.2:Gm29054:processed_transcript:1185
samples:
,0:1295,1:606,2:7000,3:5433,4:3062,5:3774,6:232383,7:92953,8:216402,9:158297,10:75643,11:54001,12:13810,13:5683,14:25000,15:8124,16:15905,17:13116,18:38635,19:21717


chrom: chr9
strand: -
right_annotated: ENSMUSG00000104080.1:Gm38279:TEC:1131
samples:
,0:499,1:159,2:200,3:50,4:143,5:296,6:488,8:90,9:1,11:460,12:90,13:90,14:59,15:150,16:50,17:100,18:188,19:50


chrom: chr9
strand: -
right_annotated: ENSMUSG00000032258.15:Lca5:protein_coding:4757
samples:
,0:81173,1:47050,2:67099,3:36969,4:21540,5:31000,6:144870,7:27498,8:38030,9:108552,10:78541,13:19349,14:23458,15:10677,16:5944,17:12513,18:5843,19:6183


chrom: chr9
strand: +
right_annotated: ENSMUSG00000058838.9:Rps27a-ps2:processed_pseudogene:467
samples:
,0:106473,1:69495,2:1273328,3:912443,4:301693,5:365106,6:2050867,7:1109081,8:1247238,9:969998,10:2819828,11:1464484,12:251667,13:159456,14:33422,15:35970,16:48110,17:40054,18:40473,19:32696


chrom: chr9
strand: +
right_annotated: ENSMUSG00000032261.16:Sh3bgrl2:protein_coding:7277
samples:
,0:52241,1:32910,2:38098,3:26709,4:30157,5:54107,6:61900,7:9575,8:19312,9:14991,10:535659,11:1476248,12:17378,14:26654,15:23422,16:23123,17:32122,18:55808,19:20071


chrom: chr9
strand: -
right_annotated: ENSMUSG00000032262.13:Elovl4:protein_coding:3001
samples:
,0:1642,1:675,2:4942,3:3226,4:1796,5:2838,6:707912,7:98291,8:143566,9:243430,10:227901,11:77496,12:60518,13:15366,14:218538,15:165714,16:291218,17:256585,18:309209,19:204081


chrom: chr9
strand: +
right_annotated: ENSMUSG00000038379.15:Ttk:protein_coding:2902
samples:
,0:210312,1:147762,2:116207,3:117861,4:16131,5:22353,6:4039,7:2267,8:6115,9:20060,17:1290,18:346,19:50


chrom: chr9
strand: +
right_annotated: ENSMUSG00000032263.14:Bckdhb:protein_coding:1613
samples:
,0:6529,1:3293,2:72541,3:74049,4:40907,5:59049,6:533360,7:81528,8:365879,9:183040,10:449788,11:157157,12:131211,13:6,14:59765,15:43997,16:42963,17:44821,18:46016,19:40286


chrom: chr9
strand: -
right_annotated: ENSMUSG00000101077.1:Gm29164:processed_pseudogene:1024
samples:
,0:95,1:50,2:640,3:133,4:225,5:287,6:658,7:156,8:467,9:322,10:60,11:272,13:208,14:247,15:99,16:586,17:250,18:600,19:350


chrom: chr9
strand: +
right_annotated: ENSMUSG00000099927.1:Gm8226:processed_pseudogene:798
samples:
,0:86308,1:52002,2:599096,3:430704,4:151205,5:176390,6:1188803,7:189749,8:777212,9:535882,10:1248962,11:715121,12:317900,13:99043,14:22951,15:15868,16:35532,17:21760,18:24723,19:27324


chrom: chr9
strand: -
right_annotated: ENSMUSG00000099779.1:Gm8228:processed_pseudogene:2192
samples:
,0:37122,1:21155,2:88874,3:44692,4:33267,5:53094,6:104832,7:20677,8:40909,9:32152,10:93211,11:72482,12:14920,13:26267,14:31914,15:15533,16:33693,17:31199,18:18383,19:19953


chrom: chr9
strand: -
right_annotated: ENSMUSG00000032265.14:Fam46a:protein_coding:5703
samples:
,0:3687,1:2912,2:188164,3:64309,4:38430,5:45637,6:2901314,7:602412,8:756366,9:711358,10:1197954,11:4439860,12:73280,16:374,17:3161


chrom: chr9
strand: -
right_annotated: ENSMUSG00000035941.15:Ibtk:protein_coding:5650
samples:
,0:94799,1:58230,2:592772,3:425307,4:143666,5:246527,6:835444,7:132969,8:202568,9:200907,10:266711,11:952487,12:32566,13:15451,14:35095,15:20640,16:22178,17:21960,18:32534,19:18757


chrom: chr9
strand: +
right_annotated: ENSMUSG00000103715.1:4933431K14Rik:TEC:1352
samples:
,0:31379,1:18812,2:25295,3:15048,4:6987,5:13670,6:38023,7:5173,8:34173,9:11949,11:26215,12:1566,14:162,15:77,16:187,17:7292,18:192,19:2005


chrom: chr9
strand: -
right_annotated: ENSMUSG00000099980.1:Gm5619:processed_pseudogene:760
samples:
,0:23301,1:11688,2:163601,3:120477,4:42093,5:49763,6:109192,7:17442,8:71139,9:49816,10:113706,11:64094,12:31864,13:10113,14:4916,15:3953,16:9540,17:5337,18:7024,19:7101


chrom: chr9
strand: -
right_annotated: ENSMUSG00000056031.13:9330154J02Rik:processed_transcript:2557
samples:
,0:607,1:149,2:17752,3:14402,4:2379,5:2554,6:15022,7:872,8:28363,9:61,11:69299,12:270,14:12931,15:11648,16:13371,17:16053,18:11019,19:14347


chrom: chr9
strand: +
right_annotated: ENSMUSG00000035274.13:Tpbg:protein_coding:3694
samples:
,0:1169,1:548,2:96028,3:67236,4:9547,5:10926,6:1031615,7:161811,8:273564,9:162183,10:272357,11:988651,12:13936,13:1813,14:179698,15:121277,16:123789,17:149983,18:143773,19:160116


chrom: chr9
strand: -
right_annotated: ENSMUSG00000032415.14:Ube2cbp:protein_coding:1790
samples:
,0:6072,1:2332,2:15133,3:12940,4:2740,5:3537,6:71338,7:21965,8:17115,9:44717,10:43157,11:71243,12:28447,14:26643,15:11804,16:4999,17:17790,18:19162,19:10354


chrom: chr9
strand: +
right_annotated: ENSMUSG00000034973.16:Dopey1:protein_coding:9193
samples:
,0:224212,1:122218,2:236317,3:109026,4:115496,5:199888,6:346425,7:80692,8:205404,9:129394,10:50088,11:430342,12:35695,13:16699,14:61903,15:62054,16:114218,17:50578,18:52255,19:40590


chrom: chr9
strand: -
right_annotated: ENSMUSG00000103731.1:Gm17530:TEC:472
samples:
,0:479,1:390,2:7407,3:2994,4:2002,5:6336,6:28105,7:2909,8:992,9:2454,11:382,15:400,16:2029,18:627,19:850


chrom: chr9
strand: -
right_annotated: ENSMUSG00000056131.13:Pgm3:protein_coding:2667
samples:
,0:34410,1:17710,2:129575,3:91273,4:115524,5:207224,6:545184,7:63775,8:449044,9:297718,10:393927,11:146601,12:87864,13:63273,14:1209,15:20296,16:30799,17:13671,18:36015,19:42314


chrom: chr9
strand: +
right_annotated: ENSMUSG00000032417.10:Rwdd2a:protein_coding:1380
samples:
,0:161784,1:108552,2:15550,3:9031,4:7991,5:10946,6:38417,7:5734,8:29205,9:26907,10:30705,12:502,13:1717,14:82089,15:39182,16:68094,17:86002,18:113290,19:113097


chrom: chr9
strand: -
right_annotated: ENSMUSG00000032418.15:Me1:protein_coding:3608
samples:
,0:649950,1:442964,2:3489761,3:1820726,4:749851,5:1301606,6:2295862,7:368238,8:631028,9:578652,10:465051,11:421492,12:93405,13:74067,14:48428,15:29533,16:43924,17:38570,18:55199,19:34724


chrom: chr9
strand: +
right_annotated: ENSMUSG00000087466.3:A330041J22Rik:antisense_RNA:1825
samples:
,0:6695,1:4565,2:21704,3:11703,4:17708,5:38304,6:6405,7:6903,8:14924,9:3711,10:126,11:737,12:366,14:864,15:425,16:2860,17:2418,18:4601,19:1463


chrom: chr9
strand: +
right_annotated: ENSMUSG00000033491.13:Prss35:protein_coding:3444
samples:
,0:42199,1:28136,2:2518896,3:2706331,4:860430,5:1327088,6:1354726,7:109707,8:597530,9:395909,10:55226,11:196271,12:11754,14:29041,15:30428,16:58050,17:43428,18:67729,19:24588


chrom: chr9
strand: -
right_annotated: ENSMUSG00000033419.15:Snap91:protein_coding:4349
samples:
,0:6121,1:4689,2:35992,3:3983,4:1198,5:1598,6:1033146,7:187730,8:346467,9:356049,10:610509,11:2892458,12:46560,13:32466,14:309484,15:230872,16:458517,17:456855,18:376880,19:344656


chrom: chr9
strand: -
right_annotated: ENSMUSG00000103891.1:Gm37941:TEC:2309
samples:
,2:395,4:100,6:41483,7:14459,8:19799,10:127,11:184687,13:29805,14:350,15:527,16:1662,18:4387,19:2900


chrom: chr9
strand: +
right_annotated: ENSMUSG00000032872.16:Cyb5r4:protein_coding:2644
samples:
,0:142816,1:91416,2:217653,3:75255,4:52686,5:86752,6:362156,7:69279,8:119907,9:108118,10:67285,11:13863,12:35236,13:3417,14:51843,15:31621,16:68620,17:73992,18:37544,19:21625


chrom: chr9
strand: +
right_annotated: ENSMUSG00000042761.14:Mrap2:protein_coding:2257
samples:
,0:616,1:100,2:4503,3:4520,4:2494,5:1895,6:15120,7:7739,8:7347,9:4813,10:60,11:713,12:3247,14:41801,15:12271,16:25078,17:15214,18:52723,19:20076


chrom: chr9
strand: -
right_annotated: ENSMUSG00000056919.9:Cep162:protein_coding:7685
samples:
,0:210270,1:123041,2:123526,3:63021,4:36994,5:61215,6:493684,7:85979,8:201628,9:214611,10:185888,11:634784,12:39120,13:9670,14:9247,15:13413,16:6605,17:17559,18:41891,19:9404


chrom: chr9
strand: +
right_annotated: ENSMUSG00000102683.1:Gm37375:TEC:387
samples:
,0:50,1:50,2:100,3:100,4:100,5:149,6:1731,7:331,8:593,9:128,10:180,11:180,12:90,13:85,14:154,15:50,16:50,17:100,18:121,19:70


chrom: chr9
strand: -
right_annotated: ENSMUSG00000100337.1:Gm5066:processed_pseudogene:822
samples:
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chrom: chr9
strand: +
right_annotated: ENSMUSG00000111795.1:AC116713.1:processed_pseudogene:430
samples:
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chrom: chr9
strand: +
right_annotated: ENSMUSG00000032420.8:Nt5e:protein_coding:3995
samples:
,0:55127,1:30595,2:51283,3:40481,4:593746,5:1100882,6:867,7:9369,8:40581,9:23657,11:204364,12:29377,13:17623,14:892,15:108,18:735


chrom: chr9
strand: -
right_annotated: ENSMUSG00000032422.17:Snx14:protein_coding:3143
samples:
,0:122332,1:81018,2:331032,3:134140,4:105021,5:194686,6:406846,7:68622,8:86259,9:103812,10:168056,11:411604,12:50498,13:72160,14:154050,15:127477,16:212670,17:149727,18:135470,19:98188


chrom: chr9
strand: +
right_annotated: ENSMUSG00000066443.5:Gm10163:processed_pseudogene:481
samples:
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chrom: chr9
strand: -
right_annotated: ENSMUSG00000092541.7:Gm20537:protein_coding:889
samples:
,0:32864,1:20352,2:126867,3:66874,4:44268,5:84283,6:149919,7:21261,8:45741,9:38616,10:39672,11:80910,12:32393,13:15392,14:35415,15:24575,16:50690,17:33395,18:34872,19:24509


chrom: chr9
strand: -
right_annotated: ENSMUSG00000101335.1:Gm28229:sense_intronic:2153
samples:
,0:7339,1:5340,2:8847,3:5827,4:3133,5:6229,6:81577,7:7381,8:2625,9:17370,11:20841,12:96,14:684,15:133,16:796,19:675


chrom: chr9
strand: -
right_annotated: ENSMUSG00000032423.12:Syncrip:protein_coding:10235
samples:
,0:123599,1:72244,2:852764,3:515395,4:323770,5:617087,6:1945173,7:533822,8:1044436,9:829776,10:621418,11:3701452,12:133734,13:30473,14:54152,15:55364,16:111950,17:71739,18:114252,19:33973


chrom: chr9
strand: -
right_annotated: ENSMUSG00000097195.9:Snhg5:processed_transcript:1045
samples:
,0:32032,1:18240,2:294906,3:125967,4:55884,5:81333,6:654983,7:127177,8:397836,9:355922,10:926872,11:864884,12:98536,13:67671,14:5610,15:6260,16:3367,17:8006,18:11083,19:3902


chrom: chr9
strand: -
right_annotated: ENSMUSG00000094263.1:Snord50a:snoRNA:72
samples:
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chrom: chr9
strand: -
right_annotated: ENSMUSG00000094179.1:Snord50b:snoRNA:72
samples:
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chrom: chr9
strand: +
right_annotated: ENSMUSG00000032425.15:Zfp949:protein_coding:3472
samples:
,0:60615,1:36304,2:61100,3:34631,4:24670,5:40294,6:354291,7:43584,8:62659,9:71913,10:258458,11:444131,12:11289,13:40236,14:32362,15:25854,16:50163,17:61460,18:85187,19:32894


chrom: chr9
strand: +
right_annotated: ENSMUSG00000092805.2:Gm26461:misc_RNA:290
samples:
,0:285,1:84,2:80,4:450,6:9481,7:3185,8:1537,9:2231,10:1387,11:3299,12:46,13:57,14:214,15:235,16:171,18:718,19:79


chrom: chr9
strand: -
right_annotated: ENSMUSG00000097073.7:9430037G07Rik:lincRNA:3177
samples:
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chrom: chr9
strand: -
right_annotated: ENSMUSG00000079427.10:Mthfsl:protein_coding:970
samples:
,0:6555,1:3450,2:43334,3:28443,4:12781,5:20276,6:329242,7:48049,8:183896,9:162728,10:400736,11:196829,12:42214,13:24802,14:15264,15:7067,16:14208,17:17063,18:22365,19:15694


chrom: chr9
strand: +
right_annotated: ENSMUSG00000074149.9:Gm10634:antisense_RNA:2464
samples:
,0:119551,1:71696,2:4388,3:2809,4:1218,5:1485,6:21813,7:3965,8:16656,9:10925,10:38106,11:13826,12:1753,13:1082,14:575,16:40,17:412,18:1197,19:1015


chrom: chr9
strand: +
right_annotated: ENSMUSG00000101698.1:Gm29562:lincRNA:904
samples:
,0:823,1:691,2:2211,3:921,4:387,5:1032,6:15206,7:3294,8:3468,9:1738,10:4295,11:3748,12:891,13:1225,14:350,15:50,16:250,17:250,18:100,19:149


chrom: chr9
strand: -
right_annotated: ENSMUSG00000097177.8:9330159M07Rik:processed_transcript:3661
samples:
,0:51284,1:31731,2:8536,3:8413,4:3928,5:3998,6:7505,7:5709,8:8283,9:1391,10:1928,11:6456,12:440,13:11420,14:1631,15:536,16:207,17:56,18:2415,19:793


chrom: chr9
strand: +
right_annotated: ENSMUSG00000100838.1:Gm29094:protein_coding:664
samples:
,0:1809,1:636,2:27133,3:11959,4:7098,5:9621,6:88129,7:13222,8:29614,9:33928,10:98885,11:90183,12:16658,13:8839,14:3079,15:632,16:1253,17:2945,18:4151,19:2659


chrom: chr9
strand: +
right_annotated: ENSMUSG00000066442.17:Mthfs:protein_coding:1104
samples:
,0:4152,1:2072,2:39012,3:20573,4:10816,5:14355,6:284982,7:45616,8:139312,9:117320,10:278695,11:215589,12:48900,13:27848,14:10607,15:3019,16:7766,17:12548,18:14307,19:7582


chrom: chr9
strand: -
right_annotated: ENSMUSG00000111806.1:AC121793.2:lincRNA:2728
samples:
,0:34,2:478,3:658,4:345,5:270,6:15961,7:10379,8:1374,9:18340,10:1184,11:1287,12:1815,13:2023,14:217,15:1419,16:139,17:149,18:211,19:113


chrom: chr9
strand: -
right_annotated: ENSMUSG00000032353.9:Tmed3:protein_coding:1346
samples:
,0:130215,1:74895,2:356826,3:290687,4:223735,5:344847,6:1399426,7:175618,8:899794,9:649440,10:1591961,11:782935,12:75007,13:72533,14:74324,15:37997,16:66419,17:55676,18:90617,19:52848


chrom: chr9
strand: +
right_annotated: ENSMUSG00000032356.12:Rasgrf1:protein_coding:8493
samples:
,0:23110,1:15479,2:545,3:598,4:387,5:200,6:4565,7:710,8:152,10:406037,11:531,12:1049,14:93342,15:77148,16:55050,17:164427,18:197688,19:157161


chrom: chr9
strand: +
right_annotated: ENSMUSG00000032359.14:Ctsh:protein_coding:1617
samples:
,0:28230,1:16835,2:245356,3:216846,4:197971,5:236157,6:551628,7:53852,8:292814,9:102717,10:217306,12:32631,16:500


chrom: chr9
strand: -
right_annotated: ENSMUSG00000062270.13:Morf4l1:protein_coding:1941
samples:
,0:483281,1:320112,2:302849,3:140734,4:92288,5:147323,6:1935966,7:310955,8:897203,9:694815,10:768487,11:1623518,12:169562,13:187622,14:146627,15:81444,16:127472,17:133547,18:174465,19:115727


chrom: chr9
strand: +
right_annotated: ENSMUSG00000096976.1:Gm26882:lincRNA:1537
samples:
,0:47257,1:33962,2:27399,3:15547,4:10903,5:17066,6:389690,7:49626,8:147610,9:117690,10:149650,11:173610,12:24388,13:64025,14:11803,15:7787,16:9205,17:11628,18:15072,19:9362


chrom: chr9
strand: +
right_annotated: ENSMUSG00000096647.2:Gm6223:processed_pseudogene:871
samples:
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chrom: chr9
strand: +
right_annotated: ENSMUSG00000032363.15:Adamts7:protein_coding:5736
samples:
,0:9396,1:6791,2:50197,3:35001,4:31048,5:61317,6:33005,7:9688,8:10422,9:47591,10:138,11:18187,12:111037,14:120,15:1733,17:529,18:248


chrom: chr9
strand: -
right_annotated: ENSMUSG00000037410.13:Tbc1d2b:protein_coding:8688
samples:
,0:14573,1:7818,2:182878,3:139764,4:258557,5:398438,6:149635,7:17074,8:23671,9:12211,10:33103,11:11039,14:5689,15:6801,16:6795,17:14243,18:5114,19:4563


chrom: chr9
strand: -
right_annotated: ENSMUSG00000081520.1:Gm16200:processed_pseudogene:331
samples:
,0:358,1:452,2:3609,3:2086,4:907,5:1346,6:14518,7:3776,8:5408,9:4713,10:9655,11:3756,12:827,13:993,14:636,15:1292,16:746,17:831,18:902,19:355


chrom: chr9
strand: +
right_annotated: ENSMUSG00000056904.3:Gm5620:processed_pseudogene:1348
samples:
,0:30394,1:16195,2:291565,3:226434,4:155666,5:264695,6:457555,7:49653,8:275215,9:214194,10:393184,11:334646,12:97895,13:72280,14:128266,15:88994,16:152666,17:147790,18:140732,19:129173


chrom: chr9
strand: -
right_annotated: ENSMUSG00000109896.1:Gm31409:lincRNA:710
samples:
,0:34,5:36,6:9193,7:4429,8:4190,9:3999,10:2299,11:3290,12:3131,13:4657,14:639,15:491,16:898,17:573,18:498,19:633


chrom: chr9
strand: +
right_annotated: ENSMUSG00000095654.2:Plscr5:protein_coding:1191
samples:
,0:242,1:131,2:14,6:120042,7:11256,8:18468,9:40569,10:113556,11:206655,12:12512,13:8976,15:266,17:430


chrom: chr9
strand: +
right_annotated: ENSMUSG00000032369.13:Plscr1:protein_coding:2366
samples:
,0:2404,1:899,2:117590,3:57627,4:33051,5:33321,6:135684,7:27733,8:166163,9:124269,10:5293,11:5148,12:7382,13:11043,15:13,16:950,18:288


chrom: chr9
strand: +
right_annotated: ENSMUSG00000032372.14:Plscr2:protein_coding:1991
samples:
,0:4994,1:2095,2:43191,3:29291,4:44192,5:46926,6:464305,7:104078,8:610610,9:364900,10:150499,11:4058,12:225,13:9326,17:37


chrom: chr9
strand: -
right_annotated: ENSMUSG00000103622.1:Gm38391:TEC:4069
samples:
,0:2301,1:850,2:86323,3:41246,4:22348,5:46409,6:51342,7:8163,8:11628,9:21667,10:39396,11:182,12:5634,13:1381,16:3945


chrom: chr9
strand: +
right_annotated: ENSMUSG00000032374.14:Plod2:protein_coding:3712
samples:
,0:34791,1:17056,2:2008981,3:984148,4:469210,5:904974,6:1585247,7:285629,8:484975,9:417649,10:886427,11:815096,12:156937,13:112101,15:340,16:10832,18:1916,19:200


chrom: chr9
strand: +
right_annotated: ENSMUSG00000101309.1:Gm29397:processed_pseudogene:333
samples:
,0:1887,1:649,2:24426,3:13990,4:15323,5:29438,6:44295,7:2845,8:20850,9:9594,10:31921,11:21797,12:7496,13:343,16:50,18:300


chrom: chr9
strand: -
right_annotated: ENSMUSG00000045414.7:1190002N15Rik:protein_coding:3950
samples:
,0:15982,1:11885,2:547365,3:210663,4:94963,5:155209,6:327611,7:98457,8:72370,9:116270,10:158061,11:622836,14:200,16:3472,17:79,18:848,19:3091


chrom: chr9
strand: +
right_annotated: ENSMUSG00000031129.9:Slc9a9:protein_coding:3468
samples:
,0:4531,1:2568,2:14129,3:20121,4:17005,5:18114,6:319036,7:33956,8:106817,9:36120,10:100614,11:150608,12:151,13:48388,15:24,16:3247,18:6640,19:2077


chrom: chr9
strand: -
right_annotated: ENSMUSG00000033350.7:Chst2:protein_coding:7328
samples:
,0:6487,1:6620,2:64055,3:62274,4:18009,5:25631,6:1683015,7:124154,8:1265952,9:563459,10:427089,11:3919569,12:1362025,13:475737,14:62400,15:76988,16:62172,17:86132,18:202976,19:89166


chrom: chr9
strand: -
right_annotated: ENSMUSG00000101281.1:Gm8449:processed_pseudogene:988
samples:
,0:4521,1:3753,2:589,3:1100,4:648,5:1013,6:2135,7:33,9:34,10:31,11:475,13:37,14:400,16:450,18:150,19:150


chrom: chr9
strand: -
right_annotated: ENSMUSG00000032407.14:U2surp:protein_coding:7732
samples:
,0:141257,1:91421,2:634282,3:362592,4:192088,5:317632,6:2078730,7:348106,8:1124497,9:694013,10:1800275,11:2461521,12:96189,13:149457,14:183709,15:124502,16:192905,17:143124,18:211599,19:165967


chrom: chr9
strand: +
right_annotated: ENSMUSG00000101037.1:Gm28424:antisense_RNA:1319
samples:
,0:4731,1:3653,2:2444,3:1444,4:3149,5:3946,6:1605,7:37,8:887,9:8727,12:90,14:2884,15:1576,16:6604,17:50,18:2519,19:2055


chrom: chr9
strand: +
right_annotated: ENSMUSG00000064225.6:Paqr9:protein_coding:8367
samples:
,0:299247,1:219086,2:40921,3:22622,4:40868,5:24606,6:34363,7:8100,9:14203,10:159249,11:111657,12:84319,13:98027,14:90219,15:51119,16:78361,17:59322,18:86473,19:60754


chrom: chr9
strand: +
right_annotated: ENSMUSG00000015354.8:Pcolce2:protein_coding:4438
samples:
,0:5558,1:2459,2:1401,3:300,4:14496,5:8848,6:72934,7:8090,8:35616,9:11166,10:1923529,11:1158616,12:107686,13:15672,14:1889,16:554,18:7940,19:3811


chrom: chr9
strand: -
right_annotated: ENSMUSG00000032839.13:Trpc1:protein_coding:4559
samples:
,0:37053,1:19939,2:16415,3:10969,4:15056,5:16378,6:643442,7:138721,8:140003,9:209229,10:98947,11:231210,12:442,13:16125,14:33133,15:8222,16:42325,17:42794,18:41019,19:36351


chrom: chr9
strand: -
right_annotated: ENSMUSG00000049493.13:Pls1:protein_coding:3704
samples:
,0:10963,1:8528,2:11988,3:11234,4:31235,5:48005,6:11498417,7:1995042,8:4163704,9:2748502,10:1701442,11:4945034,12:283067,13:422215,14:462,15:600,16:5245,17:299,18:10381,19:5808


chrom: chr9
strand: -
right_annotated: ENSMUSG00000096655.2:1700065D16Rik:antisense_RNA:2905
samples:
,0:34229,1:22640,2:1979,3:1322,4:1600,5:3239,6:1858,7:4642,8:5151,9:2015,11:1348,15:315,17:202,18:1401,19:41


chrom: chr9
strand: +
right_annotated: ENSMUSG00000032409.15:Atr:protein_coding:8211
samples:
,0:1120108,1:728573,2:310370,3:184072,4:185577,5:331100,6:583286,7:80166,8:277995,9:139453,10:506224,11:94461,12:6058,13:24431,14:1914,15:19397,16:26382,17:20099,18:16395,19:10223


chrom: chr9
strand: -
right_annotated: ENSMUSG00000097777.7:Gm16794:antisense_RNA:3351
samples:
,0:103264,1:66183,2:38304,3:20993,4:19020,5:33509,6:158085,7:23826,8:61509,9:82137,10:194649,11:9761,12:18308,13:40302,14:8574,15:4104,16:1372,17:1107,18:10710,19:4619


chrom: chr9
strand: +
right_annotated: ENSMUSG00000032410.13:Xrn1:protein_coding:10481
samples:
,0:68391,1:46240,2:270874,3:171853,4:139304,5:233690,6:930570,7:166250,8:422714,9:188835,10:949450,11:675616,12:73382,13:21349,14:27885,15:18396,16:38627,17:18944,18:39968,19:55360


chrom: chr9
strand: -
right_annotated: ENSMUSG00000101867.1:C78334:antisense_RNA:600
samples:
,0:1839,1:970,2:3536,3:2789,4:2240,5:3925,6:10068,7:3669,8:5500,9:2094,13:208,14:732,18:3122,19:1344


chrom: chr9
strand: +
right_annotated: ENSMUSG00000041440.18:Gk5:protein_coding:5652
samples:
,0:24951,1:13686,2:73679,3:49624,4:80455,5:169737,6:390367,7:44209,8:69563,9:41823,11:94635,12:44930,13:720,14:14952,15:1997,16:5178,17:378,18:4669,19:2327


chrom: chr9
strand: +
right_annotated: ENSMUSG00000032411.15:Tfdp2:protein_coding:7603
samples:
,0:87044,1:52000,2:501114,3:302314,4:275288,5:538081,6:684326,7:95073,8:229979,9:173869,10:440763,11:315226,12:47223,13:35347,14:32054,15:23919,16:55116,17:82735,18:51958,19:39286


chrom: chr9
strand: -
right_annotated: ENSMUSG00000100382.1:Gm28924:processed_pseudogene:241
samples:
,2:146,4:50,5:83,6:1142,7:811,8:881,9:570,10:268,11:1743,12:144,13:78,14:304,15:175,16:753,17:127,18:603,19:266


chrom: chr9
strand: -
right_annotated: ENSMUSG00000032412.8:Atp1b3:protein_coding:1994
samples:
,0:1219973,1:801835,2:731227,3:470188,4:341635,5:567980,6:729063,7:128332,8:405857,9:379732,10:108829,11:254384,12:93526,13:20545,14:83240,15:73456,16:129581,17:117421,18:124798,19:99009


chrom: chr9
strand: -
right_annotated: ENSMUSG00000051234.6:Rnf7:protein_coding:1232
samples:
,0:194220,1:120281,2:250375,3:176509,4:116295,5:211658,6:1750728,7:323720,8:978291,9:633491,10:1089699,11:581658,12:245219,13:173582,14:95781,15:77251,16:74270,17:90327,18:118690,19:69520


chrom: chr9
strand: -
right_annotated: ENSMUSG00000032413.12:Rasa2:protein_coding:5813
samples:
,0:42095,1:25704,2:124001,3:64852,4:53802,5:113064,6:757449,7:129361,8:272846,9:180073,10:44659,11:119125,12:6027,13:12170,14:40852,15:49262,16:46954,17:41094,18:26273,19:15284


chrom: chr9
strand: -
right_annotated: ENSMUSG00000040433.16:Zbtb38:protein_coding:7406
samples:
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chrom: chr9
strand: -
right_annotated: ENSMUSG00000100922.1:Gm8520:processed_pseudogene:868
samples:
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chrom: chr9
strand: -
right_annotated: ENSMUSG00000043587.15:Pxylp1:protein_coding:3295
samples:
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chrom: chr9
strand: +
right_annotated: ENSMUSG00000062933.7:Gm10123:processed_pseudogene:490
samples:
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chrom: chr9
strand: +
right_annotated: ENSMUSG00000101209.1:Gm8524:processed_pseudogene:379
samples:
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chrom: chr9
strand: +
right_annotated: ENSMUSG00000097258.1:Gm26767:lincRNA:4476
samples:
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chrom: chr9
strand: -
right_annotated: ENSMUSG00000032449.13:Slc25a36:protein_coding:5305
samples:
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chrom: chr9
strand: +
right_annotated: ENSMUSG00000084911.1:Gm16185:antisense_RNA:3207
samples:
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chrom: chr9
strand: +
right_annotated: ENSMUSG00000101502.1:Rpl7a-ps10:processed_pseudogene:798
samples:
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chrom: chr9
strand: -
right_annotated: ENSMUSG00000101000.1:Gm5371:processed_pseudogene:1577
samples:
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chrom: chr9
strand: -
right_annotated: ENSMUSG00000101953.1:Gm29241:processed_pseudogene:1096
samples:
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chrom: chr9
strand: -
right_annotated: ENSMUSG00000032452.12:Clstn2:protein_coding:5691
samples:
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chrom: chr9
strand: +
right_annotated: ENSMUSG00000032456.13:Nmnat3:protein_coding:2478
samples:
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chrom: chr9
strand: +
right_annotated: ENSMUSG00000101452.1:Gm28530:processed_pseudogene:577
samples:
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chrom: chr9
strand: +
right_annotated: ENSMUSG00000046402.10:Rbp1:protein_coding:2652
samples:
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chrom: chr9
strand: -
right_annotated: ENSMUSG00000051074.4:4930579K19Rik:processed_transcript:632
samples:
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chrom: chr9
strand: +
right_annotated: ENSMUSG00000032458.6:Copb2:protein_coding:3050
samples:
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chrom: chr9
strand: -
right_annotated: ENSMUSG00000032459.9:Mrps22:protein_coding:1197
samples:
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chrom: chr9
strand: +
right_annotated: ENSMUSG00000102861.1:Gm37637:antisense_RNA:1256
samples:
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chrom: chr9
strand: -
right_annotated: ENSMUSG00000100839.1:Gm5920:processed_pseudogene:853
samples:
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chrom: chr9
strand: -
right_annotated: ENSMUSG00000101240.1:Gm28266:processed_pseudogene:439
samples:
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chrom: chr9
strand: +
right_annotated: ENSMUSG00000032463.10:Faim:protein_coding:1076
samples:
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chrom: chr9
strand: -
right_annotated: ENSMUSG00000032462.14:Pik3cb:protein_coding:6478
samples:
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chrom: chr9
strand: -
right_annotated: ENSMUSG00000096316.7:Faiml:protein_coding:798
samples:
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chrom: chr9
strand: -
right_annotated: ENSMUSG00000103638.1:Gm38327:TEC:1755
samples:
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chrom: chr9
strand: +
right_annotated: ENSMUSG00000056267.14:Cep70:protein_coding:4017
samples:
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chrom: chr9
strand: -
right_annotated: ENSMUSG00000100281.1:4930422M22Rik:antisense_RNA:948
samples:
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chrom: chr9
strand: +
right_annotated: ENSMUSG00000103857.1:Gm37249:TEC:2869
samples:
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chrom: chr9
strand: -
right_annotated: ENSMUSG00000032470.16:Mras:protein_coding:4821
samples:
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chrom: chr9
strand: -
right_annotated: ENSMUSG00000032468.11:Armc8:protein_coding:6330
samples:
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chrom: chr9
strand: +
right_annotated: ENSMUSG00000032469.12:Dbr1:protein_coding:2261
samples:
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chrom: chr9
strand: +
right_annotated: ENSMUSG00000037784.14:Dzip1l:protein_coding:4420
samples:
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chrom: chr9
strand: -
right_annotated: ENSMUSG00000099631.1:Gm8641:processed_pseudogene:826
samples:
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chrom: chr9
strand: -
right_annotated: ENSMUSG00000032475.15:Nck1:protein_coding:4607
samples:
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chrom: chr9
strand: -
right_annotated: ENSMUSG00000070287.3:Slc35g2:protein_coding:1590
samples:
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chrom: chr9
strand: +
right_annotated: ENSMUSG00000037286.15:Stag1:protein_coding:6186
samples:
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chrom: chr9
strand: -
right_annotated: ENSMUSG00000032527.13:Pccb:protein_coding:2320
samples:
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chrom: chr9
strand: +
right_annotated: ENSMUSG00000066415.4:Msl2:protein_coding:5627
samples:
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chrom: chr9
strand: -
right_annotated: ENSMUSG00000043154.15:Ppp2r3a:protein_coding:7229
samples:
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chrom: chr9
strand: +
right_annotated: ENSMUSG00000104392.1:Gm37962:TEC:2034
samples:
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chrom: chr9
strand: +
right_annotated: ENSMUSG00000103672.1:Gm37621:TEC:5531
samples:
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chrom: chr9
strand: -
right_annotated: ENSMUSG00000104094.1:Gm37314:TEC:2685
samples:
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chrom: chr9
strand: -
right_annotated: ENSMUSG00000061486.7:Gm5161:processed_pseudogene:853
samples:
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chrom: chr9
strand: -
right_annotated: ENSMUSG00000100807.2:Gm29521:processed_transcript:1232
samples:
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chrom: chr9
strand: -
right_annotated: ENSMUSG00000032537.15:Ephb1:protein_coding:6487
samples:
,0:23493,1:13113,2:19480,3:11471,4:122564,5:247015,6:750497,7:68569,8:304065,9:234204,10:169602,11:282870,12:156051,13:106198,14:128706,15:75033,16:128336,17:140404,18:63292,19:49135


chrom: chr9
strand: +
right_annotated: ENSMUSG00000097524.1:Gm26846:lincRNA:4869
samples:
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chrom: chr9
strand: -
right_annotated: ENSMUSG00000032534.18:Cep63:protein_coding:4958
samples:
,0:2079244,1:1393278,2:187290,3:87744,4:72126,5:120818,6:235970,7:64503,8:229079,9:87705,10:36908,11:248152,12:167801,13:11106,14:51977,15:8701,16:23647,17:33087,18:54625,19:42238


chrom: chr9
strand: +
right_annotated: ENSMUSG00000035048.13:Anapc13:protein_coding:1192
samples:
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chrom: chr9
strand: +
right_annotated: ENSMUSG00000032531.15:Amotl2:protein_coding:4462
samples:
,0:17692,1:9835,2:454853,3:131225,4:300286,5:505026,6:685211,7:88270,8:242824,9:226985,10:316873,11:636276,12:18319,13:10460,15:24,16:282,17:4014,18:123,19:399


chrom: chr9
strand: -
right_annotated: ENSMUSG00000102204.1:Gm36958:TEC:1875
samples:
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chrom: chr9
strand: +
right_annotated: ENSMUSG00000032547.12:Ryk:protein_coding:2916
samples:
,0:43273,1:25355,2:370217,3:179040,4:226764,5:440739,6:589937,7:102321,8:224408,9:176583,10:3965,11:205781,12:30331,13:350,14:1089,15:2624,16:1520,17:6781,18:9410,19:2303


chrom: chr9
strand: +
right_annotated: ENSMUSG00000032548.14:Slco2a1:protein_coding:7122
samples:
,0:13764,1:8210,2:262937,3:66797,4:35174,5:22810,6:20519,7:9874,8:34658,9:203,10:120,11:62,12:34,15:767,16:139,17:281,18:1385


chrom: chr9
strand: +
right_annotated: ENSMUSG00000032549.7:Rab6b:protein_coding:5031
samples:
,0:9053,1:5694,2:68329,3:29189,4:16358,5:16863,6:151351,7:42969,8:16305,9:42123,10:306,11:10897,12:3236,14:773654,15:638744,16:1048514,17:980581,18:845272,19:675492


chrom: chr9
strand: -
right_annotated: ENSMUSG00000032553.14:Srprb:protein_coding:3064
samples:
,0:185235,1:116632,2:315986,3:162044,4:135881,5:233698,6:537664,7:125037,8:439941,9:332603,10:245336,11:372259,12:215176,13:95905,14:113116,15:59310,16:75238,17:84199,18:43099,19:25294


chrom: chr9
strand: -
right_annotated: ENSMUSG00000090639.1:Gm20425:protein_coding:3028
samples:
,0:184662,1:130674,2:298436,3:368211,4:1063303,5:1529510,6:439333,7:24003,8:176566,9:115628,10:18250,11:135426,12:111275,13:43577,14:40914,15:20244,16:24850,17:33307,18:17846,19:12443


chrom: chr9
strand: -
right_annotated: ENSMUSG00000032554.15:Trf:protein_coding:2749
samples:
,0:69019,1:56886,2:166583,3:310271,4:1062073,5:1508586,6:370951,7:9088,8:15575,9:12360,12:46928,14:1245,15:465,16:264,17:8249,18:2527,19:2356


chrom: chr9
strand: +
right_annotated: ENSMUSG00000032555.10:Topbp1:protein_coding:5224
samples:
,0:305702,1:198510,2:408987,3:307818,4:130505,5:229180,6:76684,7:29890,8:35650,9:20201,10:162119,11:32680,12:12401,13:872,14:10990,15:18739,16:40516,17:48470,18:30193,19:21061


chrom: chr9
strand: -
right_annotated: ENSMUSG00000032803.15:Cdv3:protein_coding:4620
samples:
,0:723489,1:448803,2:914991,3:545699,4:376026,5:642757,6:1847818,7:162595,8:313287,9:289327,10:522423,11:1982588,12:314352,13:234228,14:74265,15:40516,16:85350,17:88369,18:109994,19:61876


chrom: chr9
strand: -
right_annotated: ENSMUSG00000042757.16:Tmem108:protein_coding:4220
samples:
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chrom: chr9
strand: +
right_annotated: ENSMUSG00000032558.19:Nphp3:protein_coding:5899
samples:
,0:43602,1:28591,2:82957,3:48197,4:38020,5:66641,6:212708,7:38182,8:34979,9:3315,10:20040,12:31512,13:22338,15:44,16:665,18:1710,19:1000


chrom: chr9
strand: +
right_annotated: ENSMUSG00000101152.1:Gm28305:protein_coding:365
samples:
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chrom: chr9
strand: -
right_annotated: ENSMUSG00000103062.1:Gm37200:TEC:2172
samples:
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chrom: chr9
strand: -
right_annotated: ENSMUSG00000032557.12:Uba5:protein_coding:2404
samples:
,0:47833,1:29050,2:269348,3:138627,4:95607,5:166304,6:662370,7:102653,8:234030,9:243525,10:82,11:120524,12:100893,13:17410,14:144197,15:49976,16:98687,17:136416,18:77684,19:92121


chrom: chr9
strand: +
right_annotated: ENSMUSG00000090150.10:Acad11:protein_coding:3972
samples:
,0:86936,1:54009,2:258220,3:91204,4:83720,5:166292,6:275493,7:46174,8:179854,9:120223,10:915761,11:515803,12:75121,13:8157,14:40523,15:18591,16:53836,17:31926,18:28293,19:20981


chrom: chr9
strand: -
right_annotated: ENSMUSG00000079355.5:Ackr4:protein_coding:2964
samples:
,0:12023,1:6253,2:47015,3:15456,4:11046,5:24245,6:318448,7:26679,8:129261,9:83743,10:295050,11:153485,12:73494,13:53524,14:6836,15:3394,16:5365,17:4247,18:3639,19:3994


chrom: chr9
strand: -
right_annotated: ENSMUSG00000032560.14:Dnajc13:protein_coding:8027
samples:
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chrom: chr9
strand: -
right_annotated: ENSMUSG00000099773.1:Hmgb1-rs16:processed_pseudogene:613
samples:
,0:198,1:149,2:280,3:139,4:351,5:539,6:248,7:1863,8:437,9:368,10:246,11:1100,12:720,13:42,14:393,15:100,16:98,17:176,18:473,19:231


chrom: chr9
strand: -
right_annotated: ENSMUSG00000032561.15:Acpp:protein_coding:5952
samples:
,0:3862,1:2579,2:6380,3:3258,4:4377,5:3068,6:57324,7:3448,8:37540,9:8811,10:39530,11:3426,14:214,18:5229,19:727


chrom: chr9
strand: +
right_annotated: ENSMUSG00000032563.16:Mrpl3:protein_coding:5205
samples:
,0:91909,1:51826,2:227810,3:124058,4:124646,5:251900,6:226345,7:44856,8:217887,9:103512,10:201590,11:171798,12:40676,13:13839,14:96821,15:72957,16:112931,17:124149,18:84134,19:109270


chrom: chr9
strand: +
right_annotated: ENSMUSG00000104344.1:Gm38077:TEC:3245
samples:
,0:7457,1:3319,2:13087,3:5894,4:10484,5:19357,6:21244,7:742,8:318,11:127046,14:2,15:250,16:6003,17:5,18:7848,19:603


chrom: chr9
strand: -
right_annotated: ENSMUSG00000032565.9:Nudt16:protein_coding:1631
samples:
,0:11408,1:7918,2:27175,3:22169,4:28736,5:37142,6:349348,7:49650,8:171085,9:87130,10:289791,11:90268,12:11762,14:27622,15:28434,16:37389,17:47835,18:60896,19:35823


chrom: chr9
strand: -
right_annotated: ENSMUSG00000035032.12:Nek11:protein_coding:3173
samples:
,0:106605,1:67492,2:2280,3:1132,4:2948,5:2599,6:239139,7:23224,8:51082,9:40321,11:166224,12:610,14:3092,15:1036,16:291,17:75,18:3442,19:1531


chrom: chr9
strand: +
right_annotated: ENSMUSG00000032567.15:Aste1:protein_coding:2863
samples:
,0:213323,1:137222,2:42223,3:22012,4:15468,5:29477,6:139624,7:42812,8:73169,9:48305,11:3306,12:3203,14:28950,15:1961,16:562,17:34634,18:10483,19:9807


chrom: chr9
strand: -
right_annotated: ENSMUSG00000032570.17:Atp2c1:protein_coding:6234
samples:
,0:150339,1:80078,2:527406,3:262835,4:155974,5:240067,6:2026276,7:299183,8:931705,9:497291,10:590145,11:1192263,12:183309,13:158539,14:428542,15:199155,16:392430,17:404069,18:207145,19:136066


chrom: chr9
strand: -
right_annotated: ENSMUSG00000101464.1:Gm7436:processed_pseudogene:391
samples:
,0:9406,1:7075,2:5198,3:2108,4:1498,5:1697,6:669,7:179,8:273,9:394,11:121,14:613,15:178,16:875,17:502,18:1241,19:379


chrom: chr9
strand: -
right_annotated: ENSMUSG00000101597.2:Gm28555:processed_pseudogene:640
samples:
,0:5187,1:2324,2:254059,3:161268,4:50689,5:52637,6:85568,7:24517,8:60236,9:47137,10:100154,11:49272,12:10834,13:5256,14:3497,15:4274,16:6356,17:5805,18:3580,19:3283


chrom: chr9
strand: +
right_annotated: ENSMUSG00000032571.14:Pik3r4:protein_coding:5079
samples:
,0:62008,1:44126,2:291683,3:159288,4:121982,5:197059,6:239868,7:40932,8:76194,9:51943,10:4656,11:251322,12:2075,13:1611,14:103362,15:73163,16:109237,17:70724,18:142473,19:109934


chrom: chr9
strand: -
right_annotated: ENSMUSG00000032572.9:Col6a4:protein_coding:7371
samples:
,0:72153,1:45634,2:484320,3:80921,4:72607,5:89138,6:24665,7:18,9:14092,10:54085,12:5389,13:30826,14:2775,16:197,17:156,18:3787,19:738


chrom: chr9
strand: +
right_annotated: ENSMUSG00000086296.2:D030055H07Rik:antisense_RNA:4746
samples:
,0:41929,1:29160,2:5376,3:4168,4:3261,5:5683,6:4207,7:283,8:8145,9:2592,12:22808,13:18110,14:6517,15:3736,16:11261,17:275,18:8829,19:4947


chrom: chr9
strand: -
right_annotated: ENSMUSG00000020258.16:Glyctk:protein_coding:4229
samples:
,0:67386,1:46596,2:10235,3:6640,4:5506,5:11286,6:13475,7:5829,8:14344,9:791,12:51900,13:37993,14:18138,15:7384,16:15565,17:5128,18:8810,19:13506


chrom: chr9
strand: +
right_annotated: ENSMUSG00000020257.13:Wdr82:protein_coding:3747
samples:
,0:118526,1:74783,2:665144,3:410808,4:445723,5:892535,6:991071,7:102674,8:130085,9:210495,10:274553,11:8317,12:166933,13:90668,14:87192,15:75326,16:138198,17:100863,18:70371,19:57888


chrom: chr9
strand: -
right_annotated: ENSMUSG00000020253.15:Ppm1m:protein_coding:2117
samples:
,0:63595,1:43524,2:119688,3:79171,4:167747,5:338418,6:55331,7:4845,8:9550,9:5268,11:107758,13:11056,14:5840,15:4469,17:20724,18:3644,19:11667


chrom: chr9
strand: +
right_annotated: ENSMUSG00000023277.12:Twf2:protein_coding:1687
samples:
,0:28570,1:17539,2:120945,3:90355,4:85373,5:125742,6:313535,7:30883,8:127983,9:94751,10:97673,11:313031,12:144186,13:74116,14:98086,15:104397,16:198425,17:93267,18:155225,19:98154


chrom: chr9
strand: -
right_annotated: ENSMUSG00000032786.16:Alas1:protein_coding:3959
samples:
,0:257324,1:166466,2:398734,3:175804,4:263917,5:230326,6:239279,7:28960,8:186301,9:100192,10:277296,11:249373,12:121253,13:91795,14:108577,15:130778,16:190697,17:213404,18:218469,19:154386


chrom: chr9
strand: +
right_annotated: ENSMUSG00000023345.17:Poc1a:protein_coding:2483
samples:
,0:95771,1:58898,2:34554,3:29720,4:8081,5:11764,6:40322,7:3001,8:13774,9:16596,11:86483,12:19774,13:6,14:27832,15:33526,16:32565,17:34460,18:47795,19:27427


chrom: chr9
strand: +
right_annotated: ENSMUSG00000053716.9:Dusp7:protein_coding:3213
samples:
,0:4275,1:2241,2:94662,3:39285,4:31953,5:43948,6:196572,7:20415,8:8608,9:94728,10:15941,11:171803,12:91685,14:64156,15:44323,16:63236,17:52864,18:65719,19:53630


chrom: chr9
strand: +
right_annotated: ENSMUSG00000048758.14:Rpl29:protein_coding:796
samples:
,0:71965,1:51804,2:347182,3:60025,4:18669,5:24063,6:1253953,7:307138,8:131972,9:115570,10:954341,11:491569,12:64695,13:71537,14:24542,15:16022,16:27521,17:21703,18:14683,19:13246


chrom: chr9
strand: -
right_annotated: ENSMUSG00000023262.13:Acy1:protein_coding:1529
samples:
,0:5450,1:2993,2:60146,3:50630,4:21522,5:29522,6:93858,7:12254,8:33070,9:76759,11:284876,12:49819,13:29076,15:5006,16:8235,17:5116,18:2198,19:649


chrom: chr9
strand: -
right_annotated: ENSMUSG00000042210.17:Abhd14a:protein_coding:1489
samples:
,0:160376,1:104852,2:95747,3:65727,4:25534,5:36960,6:279877,7:56282,8:252360,9:138476,10:602825,11:397096,12:39839,13:61923,14:146513,15:77636,16:133180,17:119367,18:102024,19:66415


chrom: chr9
strand: +
right_annotated: ENSMUSG00000042073.15:Abhd14b:protein_coding:2350
samples:
,0:26464,1:18234,2:133271,3:34276,4:25488,5:24050,6:918219,7:96727,8:342301,9:221365,10:216575,11:433085,12:455338,13:289177,14:33286,15:7574,16:14236,17:17033,18:35106,19:23410


chrom: chr9
strand: -
right_annotated: ENSMUSG00000100039.1:Gm28959:antisense_RNA:551
samples:
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chrom: chr9
strand: +
right_annotated: ENSMUSG00000023495.13:Pcbp4:protein_coding:2035
samples:
,0:83079,1:56480,2:71182,3:46883,4:49479,5:64578,6:392813,7:31405,8:111540,9:35912,10:279901,11:166676,12:317502,13:38596,14:26392,15:43523,16:29829,17:40857,18:43400,19:38916


chrom: chr9
strand: -
right_annotated: ENSMUSG00000091735.2:Gpr62:protein_coding:1977
samples:
,0:106426,1:67168,2:1362,3:1490,4:847,5:773,6:16457,7:4203,8:1478,9:6532,10:1642,11:4073,12:1478,13:872,14:20302,15:19776,16:28439,17:22333,18:31739,19:18591


chrom: chr9
strand: -
right_annotated: ENSMUSG00000023249.15:Parp3:protein_coding:3272
samples:
,0:11682,1:6249,2:66078,3:62179,4:32624,5:37433,6:841,7:2759,9:8570,10:11938,11:5600,12:26664,13:19035,15:1755,16:1668,19:2992


chrom: chr9
strand: +
right_annotated: ENSMUSG00000041506.15:Rrp9:protein_coding:1586
samples:
,0:58514,1:35277,2:93697,3:73383,4:58097,5:101921,6:35822,7:3665,8:45990,9:34391,10:360,11:88752,12:37064,13:2586,14:29727,15:36537,16:34681,17:46995,18:48777,19:22159


chrom: chr9
strand: -
right_annotated: ENSMUSG00000023192.12:Grm2:protein_coding:4713
samples:
,0:3134,1:2494,2:16668,3:5922,4:3571,5:5302,6:642,7:540,8:3859,14:12013,15:6503,16:14164,17:17067,18:5260,19:2668


chrom: chr9
strand: -
right_annotated: ENSMUSG00000040813.16:Tex264:protein_coding:1977
samples:
,0:127566,1:93179,2:251109,3:137594,4:135414,5:214567,6:367075,7:29692,8:200015,9:139460,10:500298,11:70440,12:163749,13:59097,14:164651,15:128184,16:149630,17:220445,18:194191,19:142608


chrom: chr9
strand: -
right_annotated: ENSMUSG00000040661.6:Rad54l2:protein_coding:9305
samples:
,0:150530,1:103593,2:330727,3:169417,4:118115,5:232655,6:236031,7:14037,8:63020,9:40867,10:4996,11:31826,12:8138,13:56992,14:23541,15:17339,16:16933,17:14266,18:27931,19:7160


chrom: chr9
strand: +
right_annotated: ENSMUSG00000040325.16:Vprbp:protein_coding:5765
samples:
,0:642719,1:425730,2:301675,3:171026,4:123537,5:227947,6:409358,7:49075,8:74076,9:108602,10:7609,11:319530,12:264,13:17426,14:33251,15:35498,16:29773,17:112503,18:28135,19:26000


chrom: chr9
strand: +
right_annotated: ENSMUSG00000103835.1:Gm37612:sense_intronic:582
samples:
,0:193,2:288,3:28,5:50,6:29700,7:7840,8:8116,9:1146,10:144,11:503,12:89,13:333,14:50,15:50,16:27,17:1380,18:590,19:27


chrom: chr9
strand: -
right_annotated: ENSMUSG00000074102.4:Rbm15b:protein_coding:6511
samples:
,0:81729,1:56593,2:382040,3:199338,4:128238,5:251276,6:310635,7:45812,8:124939,9:102457,10:90520,11:573532,12:41967,13:4577,14:44974,15:20453,16:47969,17:24936,18:18778,19:27952


chrom: chr9
strand: -
right_annotated: ENSMUSG00000032575.16:Manf:protein_coding:2464
samples:
,0:421456,1:248742,2:717561,3:654111,4:433291,5:911613,6:1414884,7:309187,8:1468903,9:1210609,10:2045079,11:1277971,12:374302,13:108144,14:51912,15:61820,16:82673,17:86983,18:38883,19:39095


chrom: chr9
strand: +
right_annotated: ENSMUSG00000090207.2:4930524O07Rik:antisense_RNA:2360
samples:
,0:111722,1:67701,2:69436,3:62535,4:47780,5:96742,6:316833,7:45023,8:202965,9:121537,10:244338,11:185643,12:45342,13:31449,14:77341,15:88685,16:118147,17:73132,18:99383,19:62605


chrom: chr9
strand: -
right_annotated: ENSMUSG00000039716.12:Dock3:protein_coding:9063
samples:
,0:136475,1:84651,2:20725,3:7055,4:48984,5:100854,6:206556,7:10204,8:44865,9:5019,11:41308,13:6605,14:246297,15:236274,16:421039,17:315604,18:311439,19:264361


chrom: chr9
strand: -
right_annotated: ENSMUSG00000091366.1:Gm17040:transcribed_processed_pseudogene:1150
samples:
,0:193,1:225,2:13477,3:707,4:2733,5:5862,6:2329,7:292,8:764,9:450,10:511,11:452,12:418,14:3449,15:1139,16:534,17:1116,18:576,19:638


chrom: chr9
strand: +
right_annotated: ENSMUSG00000032578.7:Cish:protein_coding:3647
samples:
,0:5463,1:2347,2:235820,3:15784,4:46953,5:105396,6:304015,7:32519,8:48825,9:21939,13:360,14:5109,15:36897,16:38634,17:51371,18:30827,19:31531


chrom: chr9
strand: -
right_annotated: ENSMUSG00000090570.1:Gm17041:antisense_RNA:479
samples:
,0:1220,1:332,2:65404,3:3998,4:13128,5:28644,6:62658,7:6475,8:9447,9:3381,13:276,14:574,15:9073,16:9079,17:11819,18:7066,19:7700


chrom: chr9
strand: -
right_annotated: ENSMUSG00000032579.14:Hemk1:protein_coding:2192
samples:
,0:42591,1:29719,2:246165,3:64941,4:31844,5:54193,6:94341,7:15636,8:155457,9:25511,10:92408,11:143338,12:93885,13:46890,14:20781,15:20466,16:32606,17:4428,18:29452,19:27558


chrom: chr9
strand: +
right_annotated: ENSMUSG00000037977.6:6430571L13Rik:protein_coding:2599
samples:
,0:4397,1:2677,2:7331,3:2374,4:789,5:2979,6:10869,7:346,11:36896,14:3865,15:2432,16:8272,18:13998,19:11142


chrom: chr9
strand: +
right_annotated: ENSMUSG00000010066.15:Cacna2d2:protein_coding:5831
samples:
,0:19231,1:10289,2:30871,3:11964,4:3122,5:4391,6:26887,7:3353,8:4295,9:7406,10:1253,11:4340,12:733,15:622,16:4994,17:1698,18:100,19:200


chrom: chr9
strand: +
right_annotated: ENSMUSG00000010045.2:Tmem115:protein_coding:2194
samples:
,0:101911,1:79722,2:163246,3:91675,4:94154,5:165344,6:153497,7:12423,8:70457,9:6290,10:51044,11:8098,12:26836,13:21689,14:103555,15:64026,16:81996,17:56419,18:72086,19:65754


chrom: chr9
strand: -
right_annotated: ENSMUSG00000037190.12:Cyb561d2:protein_coding:1945
samples:
,0:21164,1:13766,2:64372,3:39270,4:33611,5:54071,6:476036,7:65668,8:225275,9:151742,10:355592,11:249327,12:122895,13:33193,14:52608,15:6472,16:27592,17:58437,18:59035,19:27035


chrom: chr9
strand: +
right_annotated: ENSMUSG00000010057.8:Nprl2:protein_coding:1441
samples:
,0:59665,1:43449,2:116325,3:61931,4:30966,5:45080,6:391614,7:34262,8:276443,9:131826,10:725522,11:298356,12:143903,13:109784,14:86505,15:73415,16:143505,17:125613,18:121451,19:85432


chrom: chr9
strand: +
right_annotated: ENSMUSG00000010044.12:Zmynd10:protein_coding:1765
samples:
,0:777068,1:579080,2:4634,3:3255,4:3580,5:4096,6:16404,7:6210,8:31033,9:27700,12:351,13:6105,14:7924,19:2607


chrom: chr9
strand: +
right_annotated: ENSMUSG00000010067.13:Rassf1:protein_coding:2142
samples:
,0:167798,1:105832,2:108234,3:65648,4:52601,5:72574,6:582853,7:62492,8:275467,9:178921,10:782798,11:578743,12:191875,13:32172,14:34676,15:22119,16:3517,17:42750,18:40915,19:27668


chrom: chr9
strand: -
right_annotated: ENSMUSG00000097099.2:Gm9917:antisense_RNA:5540
samples:
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chrom: chr9
strand: +
right_annotated: ENSMUSG00000010054.4:Tusc2:protein_coding:1665
samples:
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chrom: chr9
strand: +
right_annotated: ENSMUSG00000010047.12:Hyal2:protein_coding:3258
samples:
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chrom: chr9
strand: +
right_annotated: ENSMUSG00000010051.15:Hyal1:protein_coding:3777
samples:
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chrom: chr9
strand: +
right_annotated: ENSMUSG00000079334.8:Nat6:protein_coding:2053
samples:
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chrom: chr9
strand: +
right_annotated: ENSMUSG00000036091.8:Hyal3:protein_coding:1948
samples:
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chrom: chr9
strand: +
right_annotated: ENSMUSG00000010048.10:Ifrd2:protein_coding:2056
samples:
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chrom: chr9
strand: -
right_annotated: ENSMUSG00000057969.15:Sema3b:protein_coding:3707
samples:
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chrom: chr9
strand: -
right_annotated: ENSMUSG00000032562.13:Gnai2:protein_coding:2300
samples:
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chrom: chr9
strand: -
right_annotated: ENSMUSG00000010064.15:Slc38a3:protein_coding:3558
samples:
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chrom: chr9
strand: -
right_annotated: ENSMUSG00000034684.12:Sema3f:protein_coding:3488
samples:
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chrom: chr9
strand: -
right_annotated: ENSMUSG00000032580.12:Rbm5:protein_coding:3205
samples:
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chrom: chr9
strand: -
right_annotated: ENSMUSG00000032582.14:Rbm6:protein_coding:3999
samples:
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chrom: chr9
strand: +
right_annotated: ENSMUSG00000032583.7:Mon1a:protein_coding:2826
samples:
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chrom: chr9
strand: +
right_annotated: ENSMUSG00000032584.12:Mst1r:protein_coding:4722
samples:
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chrom: chr9
strand: +
right_annotated: ENSMUSG00000032936.13:Camkv:protein_coding:3297
samples:
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chrom: chr9
strand: +
right_annotated: ENSMUSG00000032586.9:Traip:protein_coding:2706
samples:
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chrom: chr9
strand: +
right_annotated: ENSMUSG00000032596.14:Uba7:protein_coding:3195
samples:
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chrom: chr9
strand: -
right_annotated: ENSMUSG00000042106.5:Fam212a:protein_coding:1025
samples:
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chrom: chr9
strand: +
right_annotated: ENSMUSG00000032595.10:Cdhr4:protein_coding:2552
samples:
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chrom: chr9
strand: +
right_annotated: ENSMUSG00000093456.7:Gm20662:protein_coding:601
samples:
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chrom: chr9
strand: +
right_annotated: ENSMUSG00000032594.11:Ip6k1:protein_coding:6074
samples:
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chrom: chr9
strand: +
right_annotated: ENSMUSG00000070284.10:Gmppb:protein_coding:2702
samples:
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chrom: chr9
strand: -
right_annotated: ENSMUSG00000041528.15:Rnf123:protein_coding:5024
samples:
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chrom: chr9
strand: +
right_annotated: ENSMUSG00000092218.1:Gm20529:processed_transcript:203
samples:
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chrom: chr9
strand: +
right_annotated: ENSMUSG00000032593.5:Amigo3:protein_coding:2543
samples:
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chrom: chr9
strand: -
right_annotated: ENSMUSG00000032590.14:Apeh:protein_coding:2518
samples:
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chrom: chr9
strand: -
right_annotated: ENSMUSG00000032589.14:Bsn:protein_coding:15938
samples:
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chrom: chr9
strand: +
right_annotated: ENSMUSG00000103658.1:Gm37201:processed_pseudogene:523
samples:
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chrom: chr9
strand: -
right_annotated: ENSMUSG00000039952.15:Dag1:protein_coding:5961
samples:
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chrom: chr9
strand: +
right_annotated: ENSMUSG00000032606.7:Nicn1:protein_coding:2133
samples:
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chrom: chr9
strand: +
right_annotated: ENSMUSG00000032607.12:Amt:protein_coding:2082
samples:
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chrom: chr9
strand: -
right_annotated: ENSMUSG00000039461.12:Tcta:protein_coding:1838
samples:
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chrom: chr9
strand: +
right_annotated: ENSMUSG00000007815.13:Rhoa:protein_coding:2197
samples:
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chrom: chr9
strand: -
right_annotated: ENSMUSG00000104208.1:Gm37401:antisense_RNA:347
samples:
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chrom: chr9
strand: +
right_annotated: ENSMUSG00000063856.7:Gpx1:protein_coding:1072
samples:
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chrom: chr9
strand: +
right_annotated: ENSMUSG00000032612.14:Usp4:protein_coding:3662
samples:
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chrom: chr9
strand: -
right_annotated: ENSMUSG00000104280.1:Rps2-ps11:processed_pseudogene:868
samples:
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chrom: chr9
strand: +
right_annotated: ENSMUSG00000104399.1:Gm37963:sense_intronic:613
samples:
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chrom: chr9
strand: -
right_annotated: ENSMUSG00000047220.5:Ccdc36:protein_coding:2890
samples:
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chrom: chr9
strand: -
right_annotated: ENSMUSG00000032609.12:Klhdc8b:protein_coding:3222
samples:
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chrom: chr9
strand: +
right_annotated: ENSMUSG00000049305.6:Ccdc71:protein_coding:3267
samples:
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chrom: chr9
strand: +
right_annotated: ENSMUSG00000052911.9:Lamb2:protein_coding:5629
samples:
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chrom: chr9
strand: +
right_annotated: ENSMUSG00000006676.16:Usp19:protein_coding:5292
samples:
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chrom: chr9
strand: +
right_annotated: ENSMUSG00000032604.16:Qars:protein_coding:2800
samples:
,0:313463,1:209726,2:659224,3:538328,4:275146,5:451300,6:1047376,7:88597,8:457823,9:427804,10:1148468,11:800760,12:351217,13:199742,14:36467,15:51957,16:110603,17:104823,18:100716,19:71676


chrom: chr9
strand: +
right_annotated: ENSMUSG00000006673.14:Qrich1:protein_coding:3685
samples:
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chrom: chr9
strand: +
right_annotated: ENSMUSG00000103970.1:Gm37678:TEC:1146
samples:
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chrom: chr9
strand: +
right_annotated: ENSMUSG00000062867.13:Impdh2:protein_coding:1858
samples:
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chrom: chr9
strand: -
right_annotated: ENSMUSG00000070283.4:Ndufaf3:protein_coding:1487
samples:
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chrom: chr9
strand: +
right_annotated: ENSMUSG00000019039.13:Dalrd3:protein_coding:1746
samples:
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chrom: chr9
strand: -
right_annotated: ENSMUSG00000066357.6:Wdr6:protein_coding:4163
samples:
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chrom: chr9
strand: -
right_annotated: ENSMUSG00000006675.10:P4htm:protein_coding:2492
samples:
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chrom: chr9
strand: -
right_annotated: ENSMUSG00000064145.12:Arih2:protein_coding:3924
samples:
,0:479491,1:308581,2:214402,3:123423,4:91748,5:165329,6:404380,7:67543,8:134792,9:95510,10:530483,11:340232,12:96652,13:48050,14:113977,15:68269,16:110754,17:61092,18:149415,19:83945


chrom: chr9
strand: +
right_annotated: ENSMUSG00000032602.6:Slc25a20:protein_coding:1783
samples:
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chrom: chr9
strand: +
right_annotated: ENSMUSG00000032601.13:Prkar2a:protein_coding:4965
samples:
,0:764733,1:493859,2:211698,3:129484,4:115781,5:226694,6:977760,7:178434,8:557084,9:475137,10:526717,11:588790,12:61401,13:58668,14:29492,15:14478,16:27629,17:55225,18:43578,19:38950


chrom: chr9
strand: +
right_annotated: ENSMUSG00000032599.12:Ip6k2:protein_coding:2854
samples:
,0:99833,1:59065,2:316205,3:194894,4:174617,5:325831,6:590420,7:85050,8:286411,9:208716,10:122296,11:125782,12:43043,13:148845,14:18040,15:9819,16:29656,17:37349,18:39029,19:26064


chrom: chr9
strand: +
right_annotated: ENSMUSG00000032598.8:Nckipsd:protein_coding:3441
samples:
,0:10997,1:8570,2:57396,3:27298,4:36947,5:59078,6:202395,7:15202,8:11396,9:28913,10:43961,11:3074,12:44858,13:21441,14:164548,15:164722,16:150830,17:150900,18:181556,19:179478


chrom: chr9
strand: +
right_annotated: ENSMUSG00000023473.12:Celsr3:protein_coding:11571
samples:
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chrom: chr9
strand: +
right_annotated: ENSMUSG00000023259.16:Slc26a6:protein_coding:2402
samples:
,0:7770,1:4860,2:34183,3:20890,4:17509,5:28603,6:35921,7:1400,8:1530,9:7309,10:1675,11:337605,12:1028,13:99,14:4983,15:6774,16:6558,17:12942,18:8529,19:15482


chrom: chr9
strand: +
right_annotated: ENSMUSG00000025651.14:Uqcrc1:protein_coding:1653
samples:
,0:717839,1:490635,2:620958,3:373617,4:262974,5:397666,6:2235531,7:179485,8:1901568,9:1073835,10:3293386,11:2106920,12:655100,13:331952,14:1199506,15:643643,16:1213168,17:1332533,18:2346287,19:1322873


chrom: chr9
strand: +
right_annotated: ENSMUSG00000025650.12:Col7a1:protein_coding:9250
samples:
,0:7081,1:4461,2:9183,3:7471,4:8188,5:15453,6:45969,7:6473,8:9103,9:310,10:23786,11:8071,12:162146,13:26025,15:863,16:335,17:1072,18:413,19:218


chrom: chr9
strand: +
right_annotated: ENSMUSG00000025648.17:Pfkfb4:protein_coding:3488
samples:
,0:167699,1:120649,2:94712,3:34710,4:26522,5:40172,6:111884,7:7307,8:43506,9:38611,10:131661,12:33854,13:9001,15:1325,16:35248,17:22801,18:933,19:9014


chrom: chr9
strand: +
right_annotated: ENSMUSG00000025647.16:Shisa5:protein_coding:2369
samples:
,0:16631,1:11429,2:622799,3:305268,4:148093,5:171877,6:867252,7:94799,8:289103,9:243847,10:251807,11:307546,12:322050,13:281192,14:228096,15:80946,16:132968,17:133874,18:107873,19:72504


chrom: chr9
strand: -
right_annotated: ENSMUSG00000049734.9:Trex1:protein_coding:1147
samples:
,0:5817,1:2851,2:54020,3:35771,4:21215,5:22916,6:213322,7:42285,8:178679,9:137859,10:42609,11:144841,13:2576,14:14265,15:3386,16:20001,17:6436,18:22277,19:17793


chrom: chr9
strand: -
right_annotated: ENSMUSG00000105383.4:Gm42641:protein_coding:4248
samples:
,0:37712,1:23039,2:154934,3:94554,4:54935,5:70923,6:307565,7:62066,8:295070,9:171218,10:95992,11:564901,12:135101,13:5580,14:26868,15:34181,16:82449,17:68665,18:156701,19:116571


chrom: chr9
strand: -
right_annotated: ENSMUSG00000025646.8:Atrip:protein_coding:2572
samples:
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chrom: chr9
strand: -
right_annotated: ENSMUSG00000091537.2:Tma7:protein_coding:1278
samples:
,0:70402,1:47519,2:141640,3:61897,4:48482,5:79814,6:1100905,7:335614,8:755675,9:620008,10:1635104,11:1080842,12:184839,13:129862,14:64289,15:28674,16:64786,17:52187,18:55456,19:29264


chrom: chr9
strand: +
right_annotated: ENSMUSG00000025645.8:Ccdc51:protein_coding:1526
samples:
,0:4763,1:3847,2:47767,3:31832,4:13523,5:24497,6:11245,7:10021,8:39396,9:418,10:231247,12:109718,14:8152,15:11213,16:31635,17:7885,18:18191,19:7022


chrom: chr9
strand: +
right_annotated: ENSMUSG00000053646.13:Plxnb1:protein_coding:8649
samples:
,0:52040,1:29050,2:698326,3:717868,4:159930,5:162158,6:576362,7:58359,8:182910,9:89179,10:146101,11:89082,12:178835,13:186902,15:750,16:7088,18:1865,19:2892


chrom: chr9
strand: -
right_annotated: ENSMUSG00000070282.6:3000002C10Rik:transcribed_processed_pseudogene:3981
samples:
,0:7076,1:4405,2:28033,3:18312,4:9588,5:21446,6:52082,7:20817,8:55565,9:23138,10:151553,11:1158,12:62779,13:54120,14:10356,15:5058,16:6278,17:29783,18:20746,19:16872


chrom: chr9
strand: +
right_annotated: ENSMUSG00000032478.14:Nme6:protein_coding:1240
samples:
,0:157512,1:110323,2:44902,3:29865,4:17224,5:25315,6:173240,7:62531,8:209481,9:117490,10:681348,11:356973,12:15995,13:32886,14:14220,15:5469,16:14228,17:4370,18:5717,19:4762


chrom: chr9
strand: +
right_annotated: ENSMUSG00000032477.13:Cdc25a:protein_coding:4709
samples:
,0:277481,1:200138,2:177225,3:93305,4:105542,5:241279,6:407988,7:28286,8:101363,9:98031,10:606,11:537538,12:30039,13:8445,14:346,15:6533,16:10189,17:13045,18:1024,19:3573


chrom: chr9
strand: +
right_annotated: ENSMUSG00000032479.15:Map4:protein_coding:10986
samples:
,0:1227497,1:857728,2:988511,3:568242,4:1261022,5:2546532,6:776737,7:108578,8:294224,9:293458,10:192165,11:781921,12:1046790,13:57587,14:213535,15:185496,16:383393,17:323023,18:344663,19:259414


chrom: chr9
strand: +
right_annotated: ENSMUSG00000106208.1:Gm4734:processed_pseudogene:777
samples:
,0:8209,1:4116,2:91619,3:56040,4:21131,5:25384,6:30398,7:10630,8:25058,9:20502,10:36661,11:21708,12:2999,13:2279,14:3647,15:3673,16:3798,17:3652,18:4418,19:3387


chrom: chr9
strand: -
right_annotated: ENSMUSG00000032480.17:Dhx30:protein_coding:5729
samples:
,0:818335,1:591801,2:466896,3:259138,4:157001,5:279771,6:601978,7:91731,8:334229,9:144929,10:313152,11:444425,12:147182,13:261452,14:144291,15:155537,16:227337,17:300287,18:387472,19:292211


chrom: chr9
strand: -
right_annotated: ENSMUSG00000098956.1:Gm27855:misc_RNA:128
samples:
,0:20714,1:13545,2:8946,3:4459,4:2973,5:6061,6:7054,7:973,8:1643,9:1522,11:4261,12:1625,13:3318,14:1922,15:1531,16:3540,17:2816,18:3998,19:3179


chrom: chr9
strand: +
right_annotated: ENSMUSG00000032481.16:Smarcc1:protein_coding:6483
samples:
,0:218516,1:144946,2:743471,3:384607,4:270059,5:507041,6:1448372,7:245480,8:546576,9:538405,10:276127,11:542472,12:18894,13:31101,14:110507,15:71074,16:84130,17:95737,18:55546,19:72861


chrom: chr9
strand: +
right_annotated: ENSMUSG00000032482.9:Cspg5:protein_coding:9859
samples:
,0:8785,1:5191,2:7427,3:4981,4:15884,5:54538,6:891625,7:84926,8:334119,9:296484,10:12892,11:135328,12:23281,13:3934,14:104617,15:72644,16:150265,17:101036,18:105067,19:72227


chrom: chr9
strand: -
right_annotated: ENSMUSG00000104988.1:Gm43622:TEC:2019
samples:
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chrom: chr9
strand: +
right_annotated: ENSMUSG00000098973.1:Mir6236:miRNA:123
samples:
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chrom: chr9
strand: +
right_annotated: ENSMUSG00000054836.12:Elp6:protein_coding:2250
samples:
,0:8575,1:5368,2:44593,3:31902,4:14706,5:23444,6:120250,7:7900,8:105713,9:30691,10:264522,11:90,12:60980,13:25115,15:14445,16:38946,17:32620,18:39727,19:26369


chrom: chr9
strand: +
right_annotated: ENSMUSG00000032485.14:Scap:protein_coding:4227
samples:
,0:80353,1:47198,2:1396462,3:953916,4:254414,5:464435,6:245243,7:43600,8:84712,9:22834,10:177666,11:235090,12:121971,13:30613,14:123596,15:82673,16:110281,17:108524,18:131357,19:91185


chrom: chr9
strand: -
right_annotated: ENSMUSG00000091102.1:5830462I19Rik:TEC:3383
samples:
,0:17015,1:10485,2:286507,3:192988,4:51581,5:97337,6:1369,7:1992,8:14264,9:621,10:19776,11:68155,12:18621,14:17256,15:11439,16:15151,17:19592,18:14654,19:12402


chrom: chr9
strand: -
right_annotated: ENSMUSG00000036057.11:Ptpn23:protein_coding:5346
samples:
,0:166795,1:119887,2:360048,3:192421,4:187552,5:365054,6:304478,7:21590,8:20265,9:40725,11:457,12:69816,13:8737,14:28609,15:22183,16:26136,17:27037,18:32462,19:19143


chrom: chr9
strand: -
right_annotated: ENSMUSG00000054792.15:Klhl18:protein_coding:4884
samples:
,0:44731,1:32777,2:106808,3:57068,4:56401,5:95341,6:82982,7:9146,8:17054,9:14923,10:106,11:121667,12:14426,13:36645,14:25641,15:26071,16:54250,17:3405,18:31701,19:33569


chrom: chr9
strand: +
right_annotated: ENSMUSG00000032489.17:Kif9:protein_coding:4262
samples:
,0:1148289,1:787402,2:18325,3:12280,4:14413,5:21578,6:704869,7:54236,8:187263,9:220098,10:3233,11:54393,12:144,13:33861,15:5448,16:6026,17:16715,18:5387,19:734


chrom: chr9
strand: +
right_annotated: ENSMUSG00000044791.16:Setd2:protein_coding:8350
samples:
,0:237375,1:149006,2:581608,3:335161,4:301008,5:544573,6:1060306,7:229566,8:264484,9:451177,10:1673119,11:630406,12:58071,13:34865,14:67213,15:75730,16:75181,17:98490,18:161422,19:73352


chrom: chr9
strand: +
right_annotated: ENSMUSG00000104983.1:Gm42763:TEC:2087
samples:
,0:1289,1:337,2:212,3:210,4:569,5:307,6:16126,7:7865,8:1398,9:49640,11:174,12:42,16:3996,18:22,19:424


chrom: chr9
strand: -
right_annotated: ENSMUSG00000056724.14:Nbeal2:protein_coding:8803
samples:
,0:28795,1:17913,2:48157,3:22660,4:44967,5:88086,6:51401,7:16143,8:33446,9:3201,10:244837,11:15407,12:7083,13:471


chrom: chr9
strand: +
right_annotated: ENSMUSG00000019659.8:Ccdc12:protein_coding:834
samples:
,0:39456,1:22811,2:66302,3:42993,4:31943,5:49671,6:334893,7:52849,8:225084,9:167853,10:304306,11:279596,12:61706,13:65452,14:84441,15:30716,16:71928,17:65889,18:77384,19:53534


chrom: chr9
strand: -
right_annotated: ENSMUSG00000032492.14:Pth1r:protein_coding:2807
samples:
,0:4281,1:2394,2:38479,3:23920,4:9967,5:7991,6:153347,7:6786,8:19449,9:198,10:387,11:73439,12:5872,13:306,14:3079,15:9625,16:13319,17:4572,18:6767,19:7455


chrom: chr9
strand: -
right_annotated: ENSMUSG00000049555.10:Tmie:protein_coding:2802
samples:
,0:9600,1:4874,2:42211,3:18386,4:40729,5:91627,6:142142,7:10121,8:53223,9:15776,10:497,11:50288,12:98788,13:37550,15:584,16:36,18:133


chrom: chr9
strand: +
right_annotated: ENSMUSG00000044037.15:Als2cl:protein_coding:5209
samples:
,0:16710,1:8679,2:148634,3:58649,4:48623,5:80928,6:152228,7:12514,8:62246,9:4099,10:138897,11:221,12:20840,13:129489,18:15,19:614


chrom: chr9
strand: +
right_annotated: ENSMUSG00000032495.8:Lrrc2:protein_coding:3657
samples:
,0:1494,1:949,2:130005,3:88459,4:26812,5:37181,6:33927,7:1681,8:83,9:140,10:54,11:110,12:70,13:4454,14:270,16:50,18:4153,19:100


chrom: chr9
strand: +
right_annotated: ENSMUSG00000032497.16:Lrrfip2:protein_coding:3994
samples:
,0:855428,1:507545,2:196146,3:95190,4:73122,5:134415,6:287402,7:35645,8:116016,9:84540,10:163602,11:25233,12:21489,13:14292,14:14514,15:32048,16:83891,17:16386,18:40683,19:40354


chrom: chr9
strand: -
right_annotated: ENSMUSG00000032498.9:Mlh1:protein_coding:2754
samples:
,0:41070,1:25998,2:62765,3:55115,4:21776,5:43292,6:332988,7:52208,8:197697,9:92657,10:318881,11:131,12:17396,13:85699,15:21795,16:20235,17:13795,18:25321,19:15146


chrom: chr9
strand: +
right_annotated: ENSMUSG00000046785.8:Epm2aip1:protein_coding:7165
samples:
,0:68553,1:43237,2:913627,3:426650,4:247340,5:485321,6:2493939,7:435198,8:800805,9:467989,10:540520,11:257527,12:10765,13:108467,14:168754,15:166820,16:182893,17:152502,18:239262,19:208828


chrom: chr9
strand: +
right_annotated: ENSMUSG00000062296.8:Trank1:protein_coding:10520
samples:
,0:218876,1:160903,2:28818,3:64406,4:1690822,5:3976891,6:1416,7:2206,8:16942,9:144,14:65807,15:68818,16:122409,17:126489,18:219906,19:120195


chrom: chr9
strand: +
right_annotated: ENSMUSG00000032500.10:Dclk3:protein_coding:3005
samples:
,0:927,1:395,2:553,3:100,4:6990,5:8440,6:27842,7:4496,8:4785,9:346,14:19690,15:48442,16:95574,17:163202,18:139727,19:83631


chrom: chr9
strand: -
right_annotated: ENSMUSG00000032503.18:Arpp21:protein_coding:9091
samples:
,0:2089,1:750,2:5,3:153,5:200,6:6450,7:2813,8:1262,9:47,10:20,11:69,12:32,13:13,14:596273,15:456368,16:837160,17:936661,18:729921,19:505968


chrom: chr9
strand: -
right_annotated: ENSMUSG00000109890.2:AU023762:lincRNA:3140
samples:
,0:185,1:143,2:1702,3:424,4:430,5:945,6:109,7:168,8:55,12:86912,14:17838,15:7134,16:14681,17:23133,18:146


chrom: chr9
strand: +
right_annotated: ENSMUSG00000111388.1:CT025751.2:processed_pseudogene:1005
samples:
,0:50,2:880,3:455,4:294,5:354,6:2276,7:120,8:867,9:699,10:587,11:295,12:606,13:422,14:742,15:536,16:1500,17:971,18:1253,19:916


chrom: chr9
strand: -
right_annotated: ENSMUSG00000032504.15:Pdcd6ip:protein_coding:5966
samples:
,0:163653,1:106188,2:684735,3:285831,4:436461,5:798599,6:649668,7:119607,8:271044,9:240489,10:107455,11:215993,12:54744,13:81716,14:117595,15:120502,16:141425,17:110992,18:150012,19:131990


chrom: chr9
strand: +
right_annotated: ENSMUSG00000033392.16:Clasp2:protein_coding:7682
samples:
,0:79620,1:46432,2:717979,3:297035,4:194475,5:355434,6:1215336,7:113105,8:178472,9:124835,10:111637,11:140620,12:21640,13:55359,14:452027,15:297233,16:482078,17:490711,18:538726,19:334698


chrom: chr9
strand: +
right_annotated: ENSMUSG00000009741.15:Ubp1:protein_coding:3944
samples:
,0:305798,1:194400,2:434682,3:195877,4:201848,5:403806,6:885126,7:103600,8:236559,9:106057,10:148959,11:784542,12:858001,13:489459,14:40692,15:25664,16:42367,17:31956,18:57615,19:35589


chrom: chr9
strand: -
right_annotated: ENSMUSG00000111793.1:CT025531.1:antisense_RNA:622
samples:
,0:17623,1:11654,2:14896,3:6526,4:7312,5:15237,6:9772,7:1184,8:8094,9:3161,11:23066,12:30141,13:22026,14:539,15:2169,16:1484,17:1329,18:3136,19:786


chrom: chr9
strand: -
right_annotated: ENSMUSG00000032507.15:Fbxl2:protein_coding:3464
samples:
,0:11804,1:7208,2:53776,3:28161,4:24826,5:50713,6:422558,7:68205,8:39354,9:93160,10:37851,11:295944,12:100235,13:78129,14:116745,15:85024,16:147488,17:127033,18:101941,19:88703


chrom: chr9
strand: -
right_annotated: ENSMUSG00000032431.6:Crtap:protein_coding:1674
samples:
,0:51854,1:31019,2:352980,3:304593,4:263990,5:321007,6:90429,7:9830,8:8573,9:4968,10:222,12:49805,13:8447,15:2717,16:3733,18:20


chrom: chr9
strand: +
right_annotated: ENSMUSG00000045594.10:Glb1:protein_coding:2396
samples:
,0:38198,1:21421,2:246308,3:151766,4:95038,5:137118,6:395069,7:65165,8:181832,9:256882,10:847722,11:588857,12:50122,13:82953,14:103425,15:12264,16:107536,17:92193,18:61653,19:47480


chrom: chr9
strand: +
right_annotated: ENSMUSG00000079260.3:Tmppe:protein_coding:2921
samples:
,0:3817,1:2430,2:40244,3:26560,4:24086,5:36027,6:21528,7:4390,8:17818,9:9420,10:15581,11:19351,12:1945,13:2363,14:27048,15:22852,16:27983,17:21157,18:25539,19:21338


chrom: chr9
strand: -
right_annotated: ENSMUSG00000079259.2:Trim71:protein_coding:9332
samples:
,0:13903,1:10360,2:14725,3:9540,4:5377,5:7559,6:310525,7:17048,8:98255,9:115904,10:20502,11:39924,12:961,13:56081,15:536,18:4634,19:295


chrom: chr9
strand: -
right_annotated: ENSMUSG00000056167.7:Cnot10:protein_coding:3227
samples:
,0:249364,1:162757,2:416957,3:269375,4:151036,5:232098,6:441991,7:53567,8:213096,9:143750,10:2619,11:599975,12:219816,13:28809,14:89320,15:57326,16:93801,17:109648,18:105635,19:96940


chrom: chr9
strand: -
right_annotated: ENSMUSG00000111744.1:AC161419.1:processed_pseudogene:406
samples:
,0:156,1:329,2:1954,3:1074,4:371,5:554,6:4327,7:833,8:4309,9:2715,10:4553,11:2140,12:486,13:508,16:40,17:26,18:13


chrom: chr9
strand: +
right_annotated: ENSMUSG00000032435.9:Dync1li1:protein_coding:2601
samples:
,0:37813,1:21418,2:233963,3:146918,4:91913,5:158097,6:3006146,7:402387,8:1092766,9:672219,10:357001,11:243064,12:437747,13:68194,14:251631,15:151350,16:271127,17:288640,18:276606,19:209431


chrom: chr9
strand: +
right_annotated: ENSMUSG00000032434.9:Cmtm6:protein_coding:3383
samples:
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chrom: chr9
strand: -
right_annotated: ENSMUSG00000032436.17:Cmtm7:protein_coding:1483
samples:
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chrom: chr9
strand: +
right_annotated: ENSMUSG00000052724.7:Gm9888:antisense_RNA:965
samples:
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chrom: chr9
strand: -
right_annotated: ENSMUSG00000041012.4:Cmtm8:protein_coding:1064
samples:
,0:728,1:447,2:12480,3:2587,4:3495,5:7610,6:441686,7:83618,8:214102,9:142186,10:100316,11:103604,12:113876,13:27752,18:355


chrom: chr9
strand: -
right_annotated: ENSMUSG00000050627.13:Gpd1l:protein_coding:4843
samples:
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chrom: chr9
strand: +
right_annotated: ENSMUSG00000040875.12:Osbpl10:protein_coding:2554
samples:
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chrom: chr9
strand: -
right_annotated: ENSMUSG00000050621.7:Rps27rt:protein_coding:374
samples:
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chrom: chr9
strand: -
right_annotated: ENSMUSG00000032437.10:Stt3b:protein_coding:4221
samples:
,0:2180315,1:1461112,2:928874,3:518710,4:321065,5:532217,6:2269946,7:314022,8:594360,9:530601,10:658837,11:2838280,12:151300,13:49677,14:100681,15:101863,16:115391,17:149877,18:61887,19:71400


chrom: chr9
strand: -
right_annotated: ENSMUSG00000111564.1:AC162179.1:processed_pseudogene:462
samples:
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chrom: chr9
strand: +
right_annotated: ENSMUSG00000111530.1:AC161265.1:processed_pseudogene:472
samples:
,0:295,1:150,2:3025,3:2782,4:1348,5:1986,6:2200,7:350,8:1803,9:730,10:768,11:666,12:270,13:175,14:640,15:800,16:1349,17:1099,18:2217,19:627


chrom: chr9
strand: -
right_annotated: ENSMUSG00000074034.1:Gm5921:processed_pseudogene:882
samples:
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chrom: chr9
strand: +
right_annotated: ENSMUSG00000056880.12:Gadl1:protein_coding:3966
samples:
,0:124714,1:78659,2:535773,3:369762,4:113500,5:122483,6:1341041,7:378252,8:1069782,9:854702,10:2333773,11:960760,12:222340,13:146936,14:35510,15:32965,16:44947,17:36959,18:36667,19:38097


chrom: chr9
strand: -
right_annotated: ENSMUSG00000080848.3:Gm9385:processed_pseudogene:472
samples:
,0:247362,1:164015,2:1374184,3:913054,4:280133,5:310635,6:2836009,7:746838,8:2019154,9:1617260,10:4522287,11:1911367,12:463378,13:317514,14:77219,15:65911,16:99382,17:84530,18:77993,19:85379


chrom: chr9
strand: -
right_annotated: ENSMUSG00000032440.13:Tgfbr2:protein_coding:8187
samples:
,0:14612,1:8518,2:250021,3:179550,4:153660,5:144854,6:361934,7:27227,8:97806,9:60591,11:200105,14:22013,16:11432,18:14853,19:2260


chrom: chr9
strand: -
right_annotated: ENSMUSG00000039607.15:Rbms3:protein_coding:8216
samples:
,0:2763,1:1746,2:175213,3:78522,4:44453,5:48576,6:3071518,7:486048,8:1107203,9:967978,10:266853,11:688179,12:8994,13:32546,14:2776,15:897,16:1771,17:79,18:1529,19:514


chrom: chr9
strand: -
right_annotated: ENSMUSG00000032443.16:Zcwpw2:transcribed_unprocessed_pseudogene:2849
samples:
,0:16868,1:10481,2:1851,3:1125,4:1203,5:1713,6:20684,7:1681,8:21316,9:91,13:540,15:289,16:1649,17:7853,18:3376,19:18


chrom: chr9
strand: +
right_annotated: ENSMUSG00000039285.12:Azi2:protein_coding:4705
samples:
,0:375442,1:250185,2:373089,3:201358,4:121685,5:205258,6:1235192,7:208454,8:206240,9:202731,10:6301,11:440642,12:140462,13:64193,14:108608,15:72764,16:203997,17:121833,18:174262,19:130021


chrom: chr9
strand: -
right_annotated: ENSMUSG00000039163.10:Cmc1:protein_coding:1169
samples:
,0:15578,1:9116,2:94315,3:57487,4:37496,5:67749,6:224090,7:43259,8:150999,9:120552,10:440669,11:194152,12:55781,13:20661,14:33144,15:10599,16:22459,17:11291,18:26265,19:25998


chrom: chr9
strand: +
right_annotated: ENSMUSG00000038708.10:Golga4:protein_coding:7583
samples:
,0:1342116,1:865088,2:663250,3:348376,4:337717,5:696016,6:996156,7:151119,8:401413,9:304437,10:322948,11:475427,12:10227,13:113243,14:98188,15:88552,16:101087,17:135057,18:98326,19:90586


chrom: chr9
strand: +
right_annotated: ENSMUSG00000039115.13:Itga9:protein_coding:7145
samples:
,0:16242,1:10919,2:901021,3:421049,4:293396,5:450735,6:51553,7:9670,8:56444,9:14326,11:14492,12:63439,13:10829,14:640,15:429,16:64,17:105,18:3059


chrom: chr9
strand: -
right_annotated: ENSMUSG00000066270.3:Gm10157:processed_pseudogene:343
samples:
,0:77864,1:51071,2:58823,3:25094,4:18899,5:31331,6:409282,7:79262,8:141943,9:111471,10:98884,11:62828,12:25329,13:14578,14:19680,15:17397,16:24858,17:18551,18:29112,19:22186


chrom: chr9
strand: -
right_annotated: ENSMUSG00000086119.2:Gm2415:antisense_RNA:3735
samples:
,0:62540,1:44982,2:30738,3:11342,4:11439,5:20268,6:10487,7:888,9:3185,13:336,14:2369,15:894,16:4430,17:2620,18:3535,19:1645


chrom: chr9
strand: +
right_annotated: ENSMUSG00000087041.1:Gm16295:lincRNA:643
samples:
,0:21058,1:16481,2:11314,3:3937,4:4370,5:6815,6:3670,7:106,9:1139,14:539,15:151,16:1271,17:149,18:340,19:356


chrom: chr9
strand: +
right_annotated: ENSMUSG00000047409.13:Ctdspl:protein_coding:4589
samples:
,0:43700,1:27950,2:228659,3:120724,4:220554,5:424990,6:417172,7:50959,8:150402,9:62562,10:192547,11:50009,12:39480,13:132051,14:29782,15:9563,16:40529,17:8355,18:17705,19:20213


chrom: chr9
strand: +
right_annotated: ENSMUSG00000038775.14:Vill:protein_coding:3063
samples:
,0:20349,1:12781,2:52656,3:34377,4:14299,5:11449,6:78769,7:7512,8:33891,9:34503,10:337,11:289848,12:200161,13:385126,16:1458,18:116,19:306


chrom: chr9
strand: -
right_annotated: ENSMUSG00000010660.3:Plcd1:protein_coding:2851
samples:
,0:28035,1:17559,2:118726,3:81452,4:155946,5:294119,6:201217,7:26607,8:96330,9:98904,11:66973,12:135239,13:76910,14:24,15:10137,16:21337,17:3449,18:18833,19:3123


chrom: chr9
strand: +
right_annotated: ENSMUSG00000038060.15:Dlec1:protein_coding:5826
samples:
,0:210359,1:164310,2:11116,3:7694,4:11343,5:17189,6:7539,7:6109,8:6584,9:195,10:431,11:222,12:6035,14:218,15:355,16:1155,17:1212,18:965,19:3324


chrom: chr9
strand: -
right_annotated: ENSMUSG00000010651.4:Acaa1b:protein_coding:1689
samples:
,0:16117,1:9287,2:61442,3:37721,4:24593,5:32540,6:58124,7:2918,8:21584,9:16304,10:59279,11:48057,12:44259,13:1300,14:16187,15:14115,16:29711,17:31331,18:13742,19:14361


chrom: chr9
strand: +
right_annotated: ENSMUSG00000111197.1:AC055818.1:processed_pseudogene:676
samples:
,0:30286,1:17810,2:123430,3:47566,4:43016,5:80137,6:120440,7:20815,8:91106,9:63650,10:155794,11:141573,12:38055,13:20097,14:44845,15:23754,16:45279,17:50068,18:52826,19:34965


chrom: chr9
strand: -
right_annotated: ENSMUSG00000036737.12:Oxsr1:protein_coding:4647
samples:
,0:48556,1:32119,2:312168,3:196276,4:107496,5:197065,6:318276,7:32542,8:39108,9:97311,11:115488,12:3520,14:17537,15:15741,16:41475,17:22559,18:8195,19:23262


chrom: chr9
strand: -
right_annotated: ENSMUSG00000032508.8:Myd88:protein_coding:1960
samples:
,0:46529,1:30181,2:118636,3:78434,4:48005,5:56856,6:71268,7:13519,8:55945,9:15853,11:115223,12:1495,13:46376,14:34711,15:6645,16:7101,17:14174,18:7815,19:1299


chrom: chr9
strand: +
right_annotated: ENSMUSG00000036138.16:Acaa1a:protein_coding:1762
samples:
,0:24764,1:11891,2:300682,3:194158,4:110055,5:173406,6:262909,7:19354,8:99193,9:103575,10:352767,11:299656,12:254801,13:9441,14:63803,15:48464,16:98663,17:104062,18:49214,19:33593


chrom: chr9
strand: +
right_annotated: ENSMUSG00000035769.9:Xylb:protein_coding:3383
samples:
,0:22668,1:16039,2:23881,3:23261,4:5871,5:7740,6:2128,7:3840,8:259,9:1168,10:41304,11:87421,12:32873,13:90,14:16317,15:17276,16:17954,17:20018,18:40059,19:30924


chrom: chr9
strand: +
right_annotated: ENSMUSG00000061393.14:Acvr2b:protein_coding:3573
samples:
,0:8828,1:6575,2:33825,3:18557,4:12059,5:14942,6:77201,7:15467,8:34597,9:13437,10:97936,11:113642,12:11100,13:6161,14:3382,15:10550,16:8637,17:11892,18:16342,19:10305


chrom: chr9
strand: -
right_annotated: ENSMUSG00000097504.1:4930516B21Rik:lincRNA:1195
samples:
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chrom: chr9
strand: +
right_annotated: ENSMUSG00000042787.14:Exog:protein_coding:3906
samples:
,0:17067,1:11538,2:57393,3:35990,4:17521,5:32669,6:168233,7:19656,8:130664,9:58699,11:272087,12:37285,13:720,14:50932,15:33445,16:133924,17:158385,18:87643,19:71895


chrom: chr9
strand: -
right_annotated: ENSMUSG00000034533.10:Scn10a:protein_coding:6710
samples:
,0:8899,1:3622,2:12342,3:5308,4:3637,5:7303,6:3435,8:3443,9:410,15:3388,16:4390,17:11018,18:35881,19:63041


chrom: chr9
strand: -
right_annotated: ENSMUSG00000034115.10:Scn11a:protein_coding:5931
samples:
,0:3356,1:1530,2:1332,3:1399,4:1953,5:5974,6:32868,7:8158,8:42944,9:18236,10:4352,11:832,14:107,15:1034,17:2001,18:710


chrom: chr9
strand: +
right_annotated: ENSMUSG00000032512.7:Wdr48:protein_coding:5160
samples:
,0:1374632,1:938274,2:454547,3:234034,4:198581,5:385216,6:315251,7:54494,8:218789,9:129510,10:152440,11:342327,12:83926,13:38115,14:114301,15:82419,16:148317,17:108469,18:110617,19:82445


chrom: chr9
strand: -
right_annotated: ENSMUSG00000032513.8:Gorasp1:protein_coding:3906
samples:
,0:267993,1:182806,2:238041,3:139348,4:114653,5:213823,6:177890,7:40065,8:92203,9:107219,10:216498,11:40345,12:69062,13:189115,14:54520,15:95637,16:61873,17:47094,18:89009,19:37879


chrom: chr9
strand: +
right_annotated: ENSMUSG00000032514.11:Ttc21a:protein_coding:4182
samples:
,0:789718,1:543843,2:2842,3:2172,4:6789,5:4323,6:176310,7:12541,8:32589,9:43220,10:28,12:10477,13:15475,14:747,16:1594,18:249,19:76


chrom: chr9
strand: -
right_annotated: ENSMUSG00000032515.8:Csrnp1:protein_coding:3287
samples:
,0:158617,1:109637,2:40635,3:16528,4:39612,5:66950,6:203331,7:40986,8:56735,9:82034,10:64154,11:61742,13:542,14:12271,15:11223,16:15214,17:6507,18:31803,19:21807


chrom: chr9
strand: +
right_annotated: ENSMUSG00000111639.1:AC117245.4:antisense_RNA:4947
samples:
,0:116505,1:74243,2:1055,3:738,4:1759,5:2701,6:6120,7:1264,8:1385,9:348,11:433,13:90,14:324,15:324,16:449,17:412,18:642,19:459


chrom: chr9
strand: +
right_annotated: ENSMUSG00000032519.11:Slc25a38:protein_coding:1791
samples:
,0:45422,1:30119,2:104041,3:54107,4:38844,5:67124,6:130848,7:9563,8:72345,9:41255,10:318342,11:137132,12:108334,13:11076,14:39213,15:13252,16:64153,17:33482,18:64117,19:50449


chrom: chr9
strand: +
right_annotated: ENSMUSG00000032518.6:Rpsa:protein_coding:2551
samples:
,0:71641,1:47641,2:716790,3:525003,4:185878,5:195611,6:2319104,7:484090,8:1241188,9:967753,10:4717361,11:2237533,12:452020,13:311159,14:6796,15:11349,16:19991,17:11957,18:19730,19:10986


chrom: chr9
strand: +
right_annotated: ENSMUSG00000041794.13:Myrip:protein_coding:4906
samples:
,0:1954,1:797,2:19246,3:13393,4:8713,5:10040,6:308,7:344,8:1286,14:11527,15:4885,16:20374,17:25714,18:3731,19:28783


chrom: chr9
strand: +
right_annotated: ENSMUSG00000083772.1:Gm15566:processed_pseudogene:590
samples:
,0:248,1:50,2:1410,3:946,4:247,5:380,6:2737,7:271,8:1877,9:1533,10:3455,11:2065,12:534,13:126,14:450,15:250,16:350,17:200,18:445,19:308


chrom: chr9
strand: -
right_annotated: ENSMUSG00000111828.1:AC123708.2:antisense_RNA:1041
samples:
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chrom: chr9
strand: +
right_annotated: ENSMUSG00000006941.5:Eif1b:protein_coding:1035
samples:
,0:322457,1:202048,2:187959,3:99866,4:100795,5:164197,6:946335,7:121817,8:450101,9:407667,10:890156,11:416473,12:171581,13:51949,14:156397,15:104887,16:227083,17:157099,18:203167,19:184216


chrom: chr9
strand: +
right_annotated: ENSMUSG00000041608.8:Entpd3:protein_coding:3453
samples:
,0:1197,1:548,2:451,3:200,4:2246,5:2114,6:127539,7:41561,8:41780,9:97862,14:22339,15:23326,16:15587,17:11700,18:37276,19:14488


chrom: chr9
strand: +
right_annotated: ENSMUSG00000025794.9:Rpl14:protein_coding:1009
samples:
,0:50701,1:32784,2:570918,3:450393,4:195980,5:228441,6:3269686,7:1132669,8:2388301,9:1878727,10:5096679,11:2606121,12:543510,13:471031,14:44727,15:29899,16:40553,17:42894,18:34546,19:33524


chrom: chr9
strand: +
right_annotated: ENSMUSG00000052658.5:5830454E08Rik:lincRNA:744
samples:
,0:11170,1:5668,2:6172,3:2244,4:1997,5:2240,6:20353,7:1931,8:8529,9:2463,11:12844,15:500,16:2423,17:1879,18:1416,19:2091


chrom: chr9
strand: -
right_annotated: ENSMUSG00000110726.1:AC118476.1:processed_pseudogene:548
samples:
,0:3525,1:2802,2:18830,3:12995,4:7817,5:12192,6:30249,7:5187,8:22828,9:21728,10:37619,11:25534,12:13785,13:6794,14:24334,15:11138,16:20596,17:19608,18:22641,19:17521


chrom: chr9
strand: +
right_annotated: ENSMUSG00000006932.17:Ctnnb1:protein_coding:3623
samples:
,0:442001,1:272553,2:4123849,3:2564901,4:1632467,5:2758129,6:5831810,7:992355,8:1807115,9:1697468,10:2483375,11:3715178,12:538005,13:539575,14:349122,15:267327,16:394876,17:298901,18:302711,19:395902


chrom: chr9
strand: -
right_annotated: ENSMUSG00000040936.15:Ulk4:protein_coding:4350
samples:
,0:1080633,1:779015,2:21249,3:23904,4:23976,5:40016,6:166416,7:12750,8:103268,9:95106,12:26552,13:15590,15:4389,16:23073,17:10934,18:10330,19:5082


chrom: chr9
strand: +
right_annotated: ENSMUSG00000110863.1:AC163350.2:bidirectional_promoter_lncRNA:877
samples:
,0:7994,1:4897,2:2439,3:1197,4:1729,5:2682,6:28659,7:2555,8:180,9:21948,10:9775,12:3541,13:1881,14:2761,15:1605,16:1131,17:4432,18:3310,19:2865


chrom: chr9
strand: +
right_annotated: ENSMUSG00000032536.11:Trak1:protein_coding:10622
samples:
,0:132335,1:95341,2:229582,3:110324,4:316048,5:621769,6:737409,7:65621,8:283884,9:244228,10:376914,11:358701,12:195319,13:81776,14:147228,15:94694,16:115186,17:95801,18:124742,19:84227


chrom: chr9
strand: +
right_annotated: ENSMUSG00000032528.5:Vipr1:protein_coding:4902
samples:
,0:2949,1:2524,2:2436,3:1719,4:1736,5:1123,6:26109,7:180,9:2409,14:49089,15:16432,16:41181,17:28854,18:28436,19:11818


chrom: chr9
strand: -
right_annotated: ENSMUSG00000061536.13:Sec22c:protein_coding:5783
samples:
,0:24395,1:16443,2:53265,3:28644,4:24231,5:44330,6:231722,7:33027,8:203532,9:25146,10:18683,11:338,12:10213,14:10078,15:14648,16:48082,17:25835,18:52521,19:49339


chrom: chr9
strand: +
right_annotated: ENSMUSG00000032526.11:Ss18l2:protein_coding:2426
samples:
,0:7191,1:6190,2:70937,3:40791,4:22254,5:32372,6:1336791,7:269147,8:706875,9:595295,10:322911,11:138805,12:165391,13:44655,14:85307,15:38199,16:92524,17:59093,18:121432,19:65459


chrom: chr9
strand: +
right_annotated: ENSMUSG00000032525.15:Nktr:protein_coding:7022
samples:
,0:771896,1:495416,2:624345,3:310731,4:250645,5:491898,6:2301821,7:433949,8:772850,9:811370,10:832853,11:2359999,12:147989,13:64691,14:23827,15:32495,16:75317,17:45393,18:56145,19:33776


chrom: chr9
strand: -
right_annotated: ENSMUSG00000097820.3:E530011L22Rik:antisense_RNA:5282
samples:
,0:96798,1:60327,2:219024,3:102575,4:73619,5:147619,6:1327732,7:194703,8:210309,9:191105,10:196116,11:327146,12:72884,13:12634,14:6153,15:4165,16:12988,17:6103,18:15908,19:10691


chrom: chr9
strand: +
right_annotated: ENSMUSG00000013419.7:Zfp651:protein_coding:6353
samples:
,0:13466,1:8094,2:212863,3:104140,4:80724,5:111030,6:317920,7:48425,8:62641,9:129521,10:88913,11:41090,12:89713,13:144553,14:34110,15:30299,16:78674,17:42089,18:47493,19:41383


chrom: chr9
strand: +
right_annotated: ENSMUSG00000074001.3:Klhl40:protein_coding:2370
samples:
,0:928,1:400,2:5128,3:885,4:3809,5:1274,6:5209,13:35,14:20556,15:11120,16:32942,17:16611,18:37821,19:44003


chrom: chr9
strand: -
right_annotated: ENSMUSG00000032523.11:Hhatl:protein_coding:1995
samples:
,0:18627,1:11256,2:2540,3:1096,4:1761,5:3800,6:283214,7:44969,8:110892,9:264215,11:777,12:27287,13:18008,14:15279,15:6405,16:9367,17:9585,18:21280,19:3821


chrom: chr9
strand: -
right_annotated: ENSMUSG00000079235.10:Ccdc13:protein_coding:2640
samples:
,0:494020,1:352106,2:5103,3:3488,4:3445,5:6017,6:130096,7:27075,8:86339,9:44747,11:388,12:3294,13:7568,14:756,15:16,16:5804,17:16434,18:4942,19:13007


chrom: chr9
strand: +
right_annotated: ENSMUSG00000092042.1:Gm17163:antisense_RNA:432
samples:
,0:25992,1:19213,2:481,3:382,4:30,5:141,6:36086,7:6130,8:9789,9:11713,14:50,16:890,17:2596,18:586,19:1705


chrom: chr9
strand: -
right_annotated: ENSMUSG00000038412.8:Higd1a:protein_coding:3030
samples:
,0:108187,1:61762,2:111974,3:67098,4:70986,5:158877,6:1158412,7:253403,8:737279,9:541385,10:397412,11:761130,12:75101,13:35318,14:238080,15:133623,16:186780,17:159958,18:273587,19:141599


chrom: chr9
strand: +
right_annotated: ENSMUSG00000111079.1:AC165080.2:antisense_RNA:1530
samples:
,0:25760,1:12692,2:9124,3:4933,4:3652,5:7022,6:43841,7:790,8:2466,9:5123,14:96,15:2123,16:3772,17:493,18:3865,19:571


chrom: chr9
strand: +
right_annotated: ENSMUSG00000111465.1:AC165080.4:lincRNA:9507
samples:
,0:16862,1:9128,2:1971,3:2176,4:2651,5:5573,6:148149,7:1702,9:4434,11:81,14:438,15:899,16:955,17:49,19:6840


chrom: chr9
strand: +
right_annotated: ENSMUSG00000043773.5:1700048O20Rik:lincRNA:1900
samples:
,0:75525,1:51633,2:27718,3:26717,4:11467,5:6027,6:44534,7:17992,8:25106,9:11617,11:110106,13:28202,14:13538,15:5974,16:21153,17:2522,18:22675,19:10899


chrom: chr9
strand: +
right_annotated: ENSMUSG00000111053.1:AC164092.2:lincRNA:753
samples:
,0:34243,1:22667,2:10161,3:9860,4:4148,5:3131,6:16822,7:1234,8:15408,9:4425,11:12390,12:20380,13:2739,14:3740,15:1835,16:5278,17:642,18:3500,19:2914


chrom: chr9
strand: +
right_annotated: ENSMUSG00000038233.9:Fam198a:protein_coding:3871
samples:
,0:1538,1:937,2:45666,3:26957,4:9042,5:12057,6:345598,7:26603,8:38371,9:71131,10:209616,11:285764,12:281909,13:38519,15:3028,16:4662,18:1580,19:1216


chrom: chr9
strand: -
right_annotated: ENSMUSG00000066235.7:Pomgnt2:protein_coding:2582
samples:
,0:17507,1:8885,2:79807,3:48363,4:48677,5:84450,6:65612,7:8004,8:29724,9:19539,11:102702,12:113445,13:101015,14:28179,15:48493,16:41308,17:129473,18:81547,19:51585


chrom: chr9
strand: +
right_annotated: ENSMUSG00000038145.17:Snrk:protein_coding:4811
samples:
,0:96164,1:56707,2:351331,3:141504,4:199759,5:360226,6:191630,7:49920,8:43711,9:120104,10:261042,11:279210,12:848,13:75,14:117967,15:128039,16:220474,17:94779,18:121453,19:90645


chrom: chr9
strand: -
right_annotated: ENSMUSG00000037949.8:Ano10:protein_coding:2879
samples:
,0:191654,1:127849,2:212497,3:107877,4:133704,5:234659,6:571697,7:48694,8:281222,9:103864,10:26904,11:50711,12:133821,14:26604,15:16726,16:39798,17:21169,18:14306,19:17711


chrom: chr9
strand: -
right_annotated: ENSMUSG00000097572.2:Gm26797:lincRNA:2746
samples:
,0:930,1:447,2:9158,3:4292,4:2843,5:4884,6:19984,7:2356,8:8862,9:6673,11:12790,12:9551,13:21588,15:518


chrom: chr9
strand: +
right_annotated: ENSMUSG00000032540.16:Abhd5:protein_coding:3157
samples:
,0:587458,1:393857,2:137931,3:65042,4:87856,5:166233,6:127236,7:44433,8:67516,9:153525,10:133101,11:303204,12:1533,14:36033,15:18444,16:42942,17:34512,18:15620,19:27934


chrom: chr9
strand: -
right_annotated: ENSMUSG00000093598.1:A730085K08Rik:antisense_RNA:2013
samples:
,0:9289,1:6176,2:32529,3:15985,4:20465,5:45606,6:48343,7:17614,8:18280,9:20437,11:77434,12:464,14:4674,15:5507,16:5991,17:7694,18:3031,19:6245


chrom: chr9
strand: +
right_annotated: ENSMUSG00000097736.8:9530059O14Rik:lincRNA:5989
samples:
,0:1031,1:1307,2:61,3:50,4:200,5:100,7:171,11:8775,14:17050,15:10930,16:12709,17:1049,18:8712,19:12209


chrom: chr9
strand: +
right_annotated: ENSMUSG00000046603.16:Tcaim:protein_coding:3049
samples:
,0:47995,1:27806,2:77861,3:24363,4:53986,5:112980,6:163668,7:20947,8:10038,9:34090,11:256519,12:8009,13:5749,14:58607,15:16319,16:29432,17:7666,18:34426,19:19328


chrom: chr9
strand: -
right_annotated: ENSMUSG00000047036.8:Zfp445:protein_coding:6392
samples:
,0:190631,1:116947,2:894511,3:436983,4:471978,5:896439,6:2030612,7:333238,8:562328,9:679227,10:413006,11:1599126,12:58437,13:178478,14:176062,15:126568,16:130566,17:196048,18:189913,19:111616


chrom: chr9
strand: -
right_annotated: ENSMUSG00000111325.1:AC125374.3:sense_intronic:1400
samples:
,0:1493,1:1148,2:3242,3:1424,4:1421,5:2754,6:2364,7:180,8:110,9:47,10:238,11:113,14:1524,15:48,16:37,18:478,19:350


chrom: chr9
strand: -
right_annotated: ENSMUSG00000097322.8:A530083I20Rik:processed_transcript:3665
samples:
,0:21450,1:12450,2:24769,3:14207,4:13175,5:25390,6:54454,7:5543,8:28591,9:2488,11:136933,13:3583,15:650,16:502,17:319


chrom: chr9
strand: +
right_annotated: ENSMUSG00000063488.6:Zkscan7:protein_coding:7253
samples:
,0:115255,1:65544,2:133857,3:72935,4:76485,5:149869,6:147410,7:12947,8:75694,9:29288,10:25169,11:353302,12:22499,13:57307,15:70,16:3913,18:5326


chrom: chr9
strand: +
right_annotated: ENSMUSG00000111063.1:AC125374.1:transcribed_unprocessed_pseudogene:5650
samples:
,0:6496,1:3268,2:53290,3:20698,4:11621,5:11463,6:143245,7:40567,8:25942,9:69520,11:14,12:582,13:19909,17:7910,18:4738


chrom: chr9
strand: +
right_annotated: ENSMUSG00000057895.11:Zfp105:protein_coding:2010
samples:
,0:173776,1:113574,2:67559,3:36950,4:25120,5:34534,6:170868,7:23739,8:57693,9:107103,11:75972,12:32227,13:16948,14:23971,15:242,16:5825,17:100,18:4139,19:5139


chrom: chr9
strand: +
right_annotated: ENSMUSG00000111163.1:AC125374.2:transcribed_unprocessed_pseudogene:6329
samples:
,0:3014,1:1303,2:6648,3:3499,4:1678,5:2294,6:13480,7:4999,8:2383,9:17920,10:1829,11:34769,12:52264,13:190,14:1220,15:802,16:3198,17:1248,18:3764,19:1094


chrom: chr9
strand: +
right_annotated: ENSMUSG00000111428.1:AC125374.4:transcribed_processed_pseudogene:162
samples:
,0:1157,1:447,2:3717,3:2158,4:608,5:1047,6:4038,7:848,8:1276,9:1107,10:1639,11:2935,12:456,13:183,14:322,15:152,16:1076,17:696,18:394,19:402


chrom: chr9
strand: -
right_annotated: ENSMUSG00000032551.7:1110059G10Rik:protein_coding:3361
samples:
,0:21016,1:11178,2:96819,3:49712,4:29617,5:53157,6:388659,7:80576,8:136954,9:126540,10:82058,11:210062,12:23650,13:56244,14:33744,15:22248,16:41931,17:44574,18:58040,19:37173


chrom: chr9
strand: +
right_annotated: ENSMUSG00000036768.6:Kif15:protein_coding:4858
samples:
,0:237257,1:143917,2:137634,3:145790,4:13243,5:14036,6:50326,7:6211,8:113591,9:1967,10:54,11:46245,12:15202,13:6359,14:311,15:736,18:465,19:757


chrom: chr9
strand: -
right_annotated: ENSMUSG00000110945.1:AC133650.1:antisense_RNA:2578
samples:
,0:10090,1:6758,2:37791,3:19738,4:17016,5:40354,6:107618,7:15892,8:49201,9:47492,10:132569,11:89643,12:2835,13:6230,14:16081,15:8064,16:10523,17:6335,18:13510,19:7200


chrom: chr9
strand: +
right_annotated: ENSMUSG00000066233.6:Tmem42:protein_coding:1259
samples:
,0:11998,1:8890,2:64060,3:38350,4:20875,5:31412,6:247054,7:29881,8:131006,9:140353,10:62229,11:88081,12:19487,13:37483,14:73033,15:40119,16:52458,17:44548,18:47910,19:30935


chrom: chr9
strand: +
right_annotated: ENSMUSG00000111789.1:AC133650.3:processed_transcript:607
samples:
,0:3504,1:2406,2:18890,3:12001,4:6933,5:11215,6:62571,7:6581,8:32572,9:34457,10:17552,11:20828,12:5357,13:9124,14:19255,15:10366,16:13374,17:12142,18:12577,19:8461


chrom: chr9
strand: +
right_annotated: ENSMUSG00000025787.6:Tgm4:protein_coding:2785
samples:
,0:4607,1:1846,2:26753,3:14293,4:11959,5:23097,6:25607,7:9189,8:24803,9:12929,13:27804,16:614,17:305,18:636,19:2477


chrom: chr9
strand: -
right_annotated: ENSMUSG00000025786.16:Zdhhc3:protein_coding:6987
samples:
,0:47678,1:31058,2:248929,3:121499,4:119780,5:230611,6:147214,7:46788,8:66490,9:100918,10:61134,11:230379,12:130804,14:192173,15:147972,16:273685,17:150259,18:232495,19:179663


chrom: chr9
strand: +
right_annotated: ENSMUSG00000025785.5:Exosc7:protein_coding:1053
samples:
,0:24484,1:14792,2:123932,3:72503,4:55379,5:86436,6:397667,7:91941,8:320238,9:228414,10:531903,11:343277,12:102446,13:36412,14:129449,15:39681,16:68758,17:54731,18:107789,19:62157


chrom: chr9
strand: -
right_annotated: ENSMUSG00000035498.10:Cdcp1:protein_coding:5310
samples:
,0:609,1:298,2:7619,3:3608,4:5736,5:2889,6:361008,7:31987,8:74426,9:143099,10:9997,11:84586,12:3516,16:100,19:1800


chrom: chr9
strand: -
right_annotated: ENSMUSG00000054871.5:Tmem158:protein_coding:1712
samples:
,0:847,1:500,2:15393,3:9271,4:7859,5:8010,6:1481,7:598,8:644,9:1714,11:3505,12:180,14:52421,15:14763,16:45960,17:44395,18:29596,19:20276


chrom: chr9
strand: -
right_annotated: ENSMUSG00000058492.5:Scp2-ps2:transcribed_unprocessed_pseudogene:1427
samples:
,0:36306,1:21708,2:379342,3:178334,4:109877,5:160852,6:999787,7:176066,8:671857,9:469390,10:1873649,11:1552884,12:246338,13:140057,14:90576,15:55528,16:120158,17:103611,18:140436,19:73080


chrom: chr9
strand: +
right_annotated: ENSMUSG00000111371.1:AC164123.1:lincRNA:447
samples:
,0:14893,1:8800,2:146418,3:70799,4:46030,5:63789,6:439868,7:73744,8:297364,9:203742,10:968263,11:813799,12:113394,13:66034,14:37532,15:24072,16:49453,17:42859,18:60175,19:30523


chrom: chr9
strand: +
right_annotated: ENSMUSG00000035202.8:Lars2:protein_coding:3894
samples:
,0:708665,1:387915,2:488667,3:297295,4:199509,5:421327,6:1719477,7:160232,8:279490,9:214845,10:404624,11:684798,12:102194,13:15990,14:473415,15:729459,16:766475,17:467191,18:413202,19:639647


chrom: chr9
strand: +
right_annotated: ENSMUSG00000025239.3:Limd1:protein_coding:4848
samples:
,0:125430,1:79109,2:333980,3:192880,4:109122,5:169206,6:927619,7:144283,8:333354,9:310458,10:491921,11:288230,12:72920,13:77408,14:5099,15:4370,16:11552,18:5881,19:1491


chrom: chr9
strand: +
right_annotated: ENSMUSG00000025240.9:Sacm1l:protein_coding:3558
samples:
,0:61476,1:35176,2:631872,3:194751,4:163415,5:298265,6:1275340,7:233027,8:521009,9:438708,10:501023,11:882391,12:14361,13:29190,14:79553,15:62277,16:119969,17:70494,18:116685,19:75396


chrom: chr9
strand: -
right_annotated: ENSMUSG00000025243.15:Slc6a20b:protein_coding:6307
samples:
,0:35070,1:20105,2:342865,3:110677,4:85621,5:161533,6:897775,7:191227,8:324327,9:240898,10:275688,11:490755,12:8126,13:16546,14:42356,15:29521,16:70041,17:35533,18:55886,19:29347


chrom: chr9
strand: -
right_annotated: ENSMUSG00000036814.13:Slc6a20a:protein_coding:4084
samples:
,0:5967,1:4390,2:10308,3:8000,4:3825,5:6761,6:35143,7:5805,8:148,9:165,10:125,11:149,12:32,13:236,18:276,19:1375


chrom: chr9
strand: +
right_annotated: ENSMUSG00000090608.1:Gm17200:lincRNA:2022
samples:
,0:142510,1:91011,2:66725,3:20851,4:20500,5:42016,6:261471,7:74498,8:135661,9:129814,10:178249,11:319254,12:18235,13:7169,14:27439,15:14506,16:23394,17:22969,18:21342,19:11187


chrom: chr9
strand: -
right_annotated: ENSMUSG00000058922.7:Gm10052:processed_pseudogene:960
samples:
,0:64631,1:31852,2:921113,3:703274,4:244698,5:362635,6:866489,7:120365,8:698845,9:542868,10:2004702,11:2428355,12:248584,13:216134,14:24239,15:35187,16:37761,17:30155,18:32310,19:31534


chrom: chr9
strand: -
right_annotated: ENSMUSG00000025245.14:Lztfl1:protein_coding:4070
samples:
,0:345509,1:216090,2:221784,3:65671,4:64242,5:122988,6:988922,7:339915,8:607513,9:484273,10:464257,11:861784,12:97656,13:17356,14:94257,15:48415,16:94007,17:85732,18:65189,19:39967


chrom: chr9
strand: -
right_annotated: ENSMUSG00000091661.2:Gm17021:sense_overlapping:2371
samples:
,0:27900,1:21230,2:22878,3:16955,4:21636,5:40756,6:54894,7:3644,8:6649,9:8951,11:27821,12:25335,15:150,17:3041,18:284


chrom: chr9
strand: -
right_annotated: ENSMUSG00000025241.16:Fyco1:protein_coding:8068
samples:
,0:450366,1:331707,2:363584,3:225491,4:306870,5:598599,6:615500,7:80787,8:96785,9:129662,10:53889,11:341187,12:146351,13:3174,14:7845,15:5127,16:7194,17:18783,18:13871,19:6110


chrom: chr9
strand: -
right_annotated: ENSMUSG00000060509.4:Xcr1:protein_coding:4453
samples:
,0:411,1:299,2:4206,3:1250,4:4111,5:11352,6:1525,7:2952,8:120,9:4488,11:53,12:87,14:115,17:50,18:214


chrom: chr9
strand: -
right_annotated: ENSMUSG00000111148.1:AC242682.1:processed_pseudogene:1165
samples:
,0:1000,1:349,2:1982,3:1112,4:717,5:1648,6:303,8:312,11:256,12:74,13:30,14:1592,15:1597,16:1478,17:2288,18:1430,19:1250


chrom: chr9
strand: -
right_annotated: ENSMUSG00000110834.1:CAAA01180111.2:lincRNA:461
samples:
,0:2270,1:835,2:7236,3:4413,4:3106,5:4279,6:28353,7:17069,8:34394,9:22100,10:33040,11:17594,12:14112,14:9946,15:6083,16:10823,17:9821,18:16188,19:5921


chrom: chr9
strand: -
right_annotated: ENSMUSG00000074829.10:2010315B03Rik:protein_coding:2623
samples:
,0:2955,1:949,2:73990,3:35730,4:16395,5:26509,6:191669,7:159677,8:153601,9:199952,10:308186,11:2887,12:51720,13:55860,14:30430,15:17460,16:14347,17:33750,18:11341,19:11422


chrom: chr9
strand: -
right_annotated: ENSMUSG00000093803.3:Ppp2r3d:protein_coding:450
samples:
,0:17906,1:11789,2:11946,3:6221,4:8596,5:10627,6:2487,7:378,8:1902,9:562,12:2133,14:1400,15:537,16:469,17:510,18:916,19:517


chrom: chrM
strand: +
right_annotated: ENSMUSG00000064336.1:mt-Tf:Mt_tRNA:68
samples:
,0:5,2:685,3:404,5:189,6:2091,7:1095,8:2277,9:813,10:7335,11:6856,13:360,14:120,15:770,16:303,17:985,18:639,19:189


chrom: chrM
strand: +
right_annotated: ENSMUSG00000064337.1:mt-Rnr1:Mt_rRNA:955
samples:
,0:185657,1:96773,2:1406810,3:540319,4:188253,5:347108,6:12244463,7:6822982,8:5442965,9:3420467,10:5704652,11:3722988,12:43046,13:32490,14:595133,15:830398,16:1147886,17:389156,18:578392,19:513700


chrom: chrM
strand: +
right_annotated: ENSMUSG00000064338.1:mt-Tv:Mt_tRNA:69
samples:
,0:65,1:3,2:296,3:205,4:345,5:192,6:18774,7:3994,8:2482,9:4997,10:15839,11:6730,12:1030,13:604,14:724,15:67,16:1011,17:982,18:991,19:215


chrom: chrM
strand: +
right_annotated: ENSMUSG00000064339.1:mt-Rnr2:Mt_rRNA:1582
samples:
,0:406958,1:239159,2:1737836,3:835534,4:277894,5:467606,6:68072374,7:44201534,8:25138547,9:17711409,10:37636141,11:32830648,12:554115,13:518384,14:6484813,15:11752741,16:15278350,17:5350209,18:7407622,19:8477243


chrom: chrM
strand: +
right_annotated: ENSMUSG00000064340.1:mt-Tl1:Mt_tRNA:75
samples:
,0:25287,1:16492,2:57507,3:29712,4:28906,5:46135,6:184448,7:98048,8:81714,9:61039,10:181630,11:340904,12:95787,13:87891,14:4155,15:4224,16:6310,17:1828,18:12905,19:8246


chrom: chrM
strand: +
right_annotated: ENSMUSG00000064341.1:mt-Nd1:protein_coding:957
samples:
,0:2589414,1:1621612,2:19904031,3:8249702,4:5395233,5:10420305,6:67496432,7:27696087,8:24523994,9:16376500,10:33858088,11:39851296,12:8292881,13:7293118,14:3513617,15:2964386,16:3937313,17:2389392,18:4783198,19:2825837


chrom: chrM
strand: +
right_annotated: ENSMUSG00000064342.1:mt-Ti:Mt_tRNA:69
samples:
,0:714,1:285,2:9603,3:4383,4:3282,5:8322,6:32565,7:11145,8:13237,9:9163,10:12548,11:18134,12:2257,13:1187,14:1872,15:2764,16:3630,17:1076,18:3108,19:455


chrom: chrM
strand: -
right_annotated: ENSMUSG00000064343.1:mt-Tq:Mt_tRNA:71
samples:
,0:517,1:683,2:5961,3:3136,4:2551,5:5991,6:207304,7:44046,8:142973,9:107865,10:208805,11:333661,12:15709,13:9513,14:6538,15:7797,16:12458,17:12958,18:9210,19:2310


chrom: chrM
strand: +
right_annotated: ENSMUSG00000064344.1:mt-Tm:Mt_tRNA:69
samples:
,0:606,1:256,2:5652,3:2795,4:2865,5:8246,6:27121,7:6401,8:10495,9:6267,10:32599,11:39467,12:603,13:6710,14:5152,15:6849,16:5986,17:8442,18:6464,19:1990


chrom: chrM
strand: +
right_annotated: ENSMUSG00000064345.1:mt-Nd2:protein_coding:1038
samples:
,0:1553286,1:950383,2:16514258,3:5311946,4:4930934,5:11184358,6:19294757,7:5913858,8:6478179,9:4405202,10:6984881,11:9147512,12:1358427,13:1111032,14:281790,15:311611,16:412349,17:245511,18:314872,19:228507


chrom: chrM
strand: +
right_annotated: ENSMUSG00000064346.1:mt-Tw:Mt_tRNA:67
samples:
,0:1215,1:986,2:4970,3:2287,4:1640,5:3249,6:12161,7:1474,8:3835,9:3671,10:1728,11:15469,12:1557,13:341,14:223,15:455,16:576,17:242,18:1498,19:729


chrom: chrM
strand: -
right_annotated: ENSMUSG00000064347.1:mt-Ta:Mt_tRNA:69
samples:
,0:8084,1:3967,2:45598,3:34683,4:12875,5:22202,6:41948,7:5881,8:26699,9:22641,10:176100,11:133522,12:7331,13:7196,14:1190,15:1010,16:2981,17:1766,18:3576,19:1911


chrom: chrM
strand: -
right_annotated: ENSMUSG00000064348.1:mt-Tn:Mt_tRNA:71
samples:
,0:5408,1:3010,2:30635,3:20473,4:9328,5:15968,6:22239,7:3571,8:16202,9:14252,10:149952,11:105621,12:6008,13:6499,14:887,15:455,16:1175,17:921,18:1403,19:783


chrom: chrM
strand: -
right_annotated: ENSMUSG00000064349.1:mt-Tc:Mt_tRNA:66
samples:
,0:12863,1:5714,2:75707,3:47985,4:18589,5:40447,6:19786,7:4254,8:17824,9:18099,10:151410,11:83589,12:10454,13:8505,14:1211,15:715,16:2308,17:1015,18:2622,19:1468


chrom: chrM
strand: -
right_annotated: ENSMUSG00000064350.1:mt-Ty:Mt_tRNA:67
samples:
,0:5071,1:3064,2:38255,3:15478,4:8485,5:22109,6:21157,7:7742,8:16467,9:10561,10:90812,11:56169,12:8256,13:6865,14:2154,15:2347,16:4050,17:1737,18:3471,19:2668


chrom: chrM
strand: +
right_annotated: ENSMUSG00000064351.1:mt-Co1:protein_coding:1545
samples:
,0:12727923,1:7504652,2:72893800,3:31797032,4:21098862,5:41689880,6:104186367,7:42746837,8:44625229,9:28770086,10:114688890,11:123281401,12:16084062,13:12929721,14:5004133,15:5545140,16:5340242,17:3956214,18:3872737,19:3681843


chrom: chrM
strand: -
right_annotated: ENSMUSG00000064352.1:mt-Ts1:Mt_tRNA:69
samples:
,0:50017,1:31424,2:314318,3:136382,4:86846,5:180867,6:2906368,7:1307557,8:956453,9:691515,10:2464173,11:2513975,12:340581,13:282197,14:128547,15:136798,16:140462,17:98379,18:108098,19:92769


chrom: chrM
strand: +
right_annotated: ENSMUSG00000064353.1:mt-Td:Mt_tRNA:70
samples:
,0:283,1:169,2:1589,3:810,4:541,5:1214,6:8182,7:3389,8:2000,9:2458,10:1242,11:1570,12:312,13:505,14:226,15:59,16:908,17:374,18:399,19:29


chrom: chrM
strand: +
right_annotated: ENSMUSG00000064354.1:mt-Co2:protein_coding:684
samples:
,0:2558224,1:1568278,2:11249300,3:6944966,4:4067547,5:7243110,6:38330280,7:17617418,8:16125702,9:11565237,10:41292625,11:29017227,12:4297471,13:3632682,14:724868,15:690214,16:751473,17:591363,18:785040,19:597299


chrom: chrM
strand: +
right_annotated: ENSMUSG00000064355.1:mt-Tk:Mt_tRNA:65
samples:
,0:332,1:184,2:1364,3:1556,4:650,5:1107,6:3261,7:1398,8:2173,9:1566,10:12382,11:3798,12:906,13:122,14:668,15:688,16:757,17:377,18:1265,19:224


chrom: chrM
strand: +
right_annotated: ENSMUSG00000064356.3:mt-Atp8:protein_coding:204
samples:
,0:465875,1:299400,2:3486987,3:1812196,4:1067087,5:1875889,6:10644663,7:8340815,8:4662880,9:3392694,10:6892961,11:9225813,12:964452,13:737442,14:434079,15:362878,16:491170,17:318499,18:541146,19:385418


chrom: chrM
strand: +
right_annotated: ENSMUSG00000064357.1:mt-Atp6:protein_coding:681
samples:
,0:1934429,1:1270165,2:14930768,3:7715454,4:4495208,5:7969795,6:67741814,7:45579746,8:23862933,9:17102465,10:29549682,11:37912341,12:5189295,13:3958769,14:1858023,15:1501328,16:2201217,17:1358452,18:2414331,19:1600752


chrom: chrM
strand: +
right_annotated: ENSMUSG00000064358.1:mt-Co3:protein_coding:784
samples:
,0:2866903,1:1783121,2:17668079,3:9978345,4:5107968,5:9268997,6:77609370,7:38923218,8:33078645,9:20948198,10:106094944,11:93395652,12:10114854,13:8077841,14:1206681,15:1512717,16:1854122,17:1182117,18:944799,19:1030545


chrom: chrM
strand: +
right_annotated: ENSMUSG00000064359.1:mt-Tg:Mt_tRNA:68
samples:
,0:412,1:27,2:2053,3:4018,4:1455,5:2438,6:4931,7:1356,8:1084,9:731,10:4176,11:2250,12:182,13:150,14:580,15:171,16:537,17:251,18:98,19:63


chrom: chrM
strand: +
right_annotated: ENSMUSG00000064360.1:mt-Nd3:protein_coding:348
samples:
,0:136332,1:86929,2:1032813,3:662737,4:294178,5:514472,6:2908367,7:1050812,8:1133529,9:784399,10:1195348,11:773393,12:154537,13:154049,14:40434,15:46484,16:88715,17:33969,18:33237,19:33671


chrom: chrM
strand: +
right_annotated: ENSMUSG00000064361.1:mt-Tr:Mt_tRNA:68
samples:
,0:344,1:44,2:812,3:1217,4:483,5:1624,6:1665,7:649,8:587,9:77,10:2356,11:2146,12:122,13:135,14:195,15:122,16:160,17:20,18:27,19:52


chrom: chrM
strand: +
right_annotated: ENSMUSG00000065947.3:mt-Nd4l:protein_coding:297
samples:
,0:269182,1:146152,2:1509998,3:787895,4:534824,5:1092923,6:2087842,7:615633,8:1017932,9:578444,10:1084876,11:1250925,12:160564,13:141908,14:130748,15:136386,16:137345,17:86749,18:106229,19:83008


chrom: chrM
strand: +
right_annotated: ENSMUSG00000064363.1:mt-Nd4:protein_coding:1378
samples:
,0:2151351,1:1309712,2:14968424,3:7892610,4:4903703,5:9959359,6:35959801,7:14066153,8:11439079,9:7505535,10:15861188,11:19510136,12:2741998,13:2555168,14:1109817,15:974881,16:1044921,17:729795,18:870195,19:621695


chrom: chrM
strand: +
right_annotated: ENSMUSG00000064364.1:mt-Th:Mt_tRNA:67
samples:
,0:2567,1:241,2:1811,3:9454,4:5516,5:9446,6:4349,7:497,8:38,9:263,10:472,11:518,12:10,13:5,14:676,15:451,16:471,17:171,18:859,19:62


chrom: chrM
strand: +
right_annotated: ENSMUSG00000064365.1:mt-Ts2:Mt_tRNA:59
samples:
,0:2852,1:275,2:2008,3:10535,4:6680,5:10097,6:5133,7:911,8:987,9:1080,10:1770,11:522,14:518,15:452,16:416,17:356,18:1074,19:44


chrom: chrM
strand: +
right_annotated: ENSMUSG00000064366.1:mt-Tl2:Mt_tRNA:71
samples:
,0:2583,1:292,2:1640,3:12793,4:7560,5:9871,6:4268,7:370,8:1199,9:1691,10:2531,11:3141,14:733,15:627,16:918,17:185,18:1516,19:39


chrom: chrM
strand: +
right_annotated: ENSMUSG00000064367.1:mt-Nd5:protein_coding:1824
samples:
,0:1797843,1:1244487,2:11265566,3:6496793,4:3119217,5:6616490,6:21468979,7:6511117,8:9332155,9:6248106,10:8979384,11:23809000,12:2211785,13:1819222,14:1143911,15:1357108,16:1220015,17:752246,18:863177,19:801944


chrom: chrM
strand: -
right_annotated: ENSMUSG00000064368.1:mt-Nd6:protein_coding:519
samples:
,0:417509,1:340262,2:3228225,3:2119068,4:743945,5:1840520,6:6236374,7:2351202,8:1807797,9:1437094,10:1441447,11:3505690,12:497093,13:428055,14:129506,15:107523,16:163681,17:87001,18:121421,19:85103


chrom: chrM
strand: -
right_annotated: ENSMUSG00000064369.1:mt-Te:Mt_tRNA:69
samples:
,0:30133,1:18398,2:173695,3:127117,4:59555,5:129342,6:168758,7:69671,8:62248,9:56654,10:49532,11:130427,12:26286,13:25554,14:4254,15:3229,16:6720,17:2511,18:3591,19:2528


chrom: chrM
strand: +
right_annotated: ENSMUSG00000064370.1:mt-Cytb:protein_coding:1144
samples:
,0:2792297,1:1586986,2:19795162,3:10848277,4:6249038,5:11274128,6:125860045,7:57608817,8:45033263,9:29890724,10:71521223,11:87396368,12:11412679,13:10418035,14:4089352,15:2664900,16:2837973,17:2781795,18:3010786,19:1953532


chrom: chrM
strand: +
right_annotated: ENSMUSG00000064371.1:mt-Tt:Mt_tRNA:67
samples:
,0:221,1:5,2:1563,3:1048,4:679,5:372,6:9074,7:2529,8:6699,9:5177,10:8843,11:10344,12:806,13:1407,14:581,15:202,16:933,17:696,18:1519,19:481


chrom: chrM
strand: -
right_annotated: ENSMUSG00000064372.1:mt-Tp:Mt_tRNA:67
samples:
,0:7811,1:3904,2:48407,3:29977,4:10024,5:18184,6:142920,7:31252,8:75097,9:58846,10:34316,11:66088,12:7978,13:5792,14:828,15:1015,16:1542,17:1512,18:2614,19:861


chrom: chrX
strand: -
right_annotated: ENSMUSG00000081232.3:Gm14373:processed_pseudogene:2158
samples:
,0:28127,1:19552,2:78511,3:38188,4:25500,5:42894,6:18269,7:2526,8:43815,9:28390,10:682,11:64374,13:180,14:6738,15:12731,16:13685,17:21495,18:14996,19:14320


chrom: chrX
strand: -
right_annotated: ENSMUSG00000080186.2:Gm14448:processed_pseudogene:210
samples:
,0:150,1:100,2:1747,3:1250,4:289,5:493,6:12672,7:3967,8:3595,9:3459,10:12584,11:13392,12:1411,13:2432,14:5628,15:3473,16:4769,17:4487,18:4796,19:3966


chrom: chrX
strand: +
right_annotated: ENSMUSG00000081661.1:Gm14450:processed_pseudogene:240
samples:
,0:137,1:88,2:1453,3:625,4:387,5:662,6:274,7:15,8:451,9:201,10:209,11:321,14:2611,15:1320,16:3003,17:2074,18:2682,19:2356


chrom: chrX
strand: +
right_annotated: ENSMUSG00000073295.4:Nudt11:protein_coding:3036
samples:
,0:9465,1:6253,2:38103,3:17038,4:21247,5:44840,6:116711,7:15737,8:94462,9:10655,10:2974,11:596911,13:512,14:32899,15:34044,16:50314,17:79657,18:28898,19:43986


chrom: chrX
strand: +
right_annotated: ENSMUSG00000082109.1:Rpl19-ps12:processed_pseudogene:591
samples:
,0:429,1:419,2:6031,3:4350,4:2259,5:2789,6:8027,7:1845,8:6788,9:6802,10:7543,11:4644,12:834,13:260,14:1963,15:2057,16:2278,17:1118,18:2559,19:1839


chrom: chrX
strand: -
right_annotated: ENSMUSG00000073293.4:Nudt10:protein_coding:1775
samples:
,0:7611,1:4505,2:19232,3:8128,4:5280,5:7671,6:150730,7:27164,8:25940,9:10349,10:82,11:844170,12:31459,13:3566,14:48642,15:25181,16:22153,17:15015,18:44108,19:33276


chrom: chrX
strand: +
right_annotated: ENSMUSG00000068270.15:Shroom4:protein_coding:8761
samples:
,0:5038,1:4079,2:79599,3:36870,4:18286,5:29732,6:75508,7:10703,8:1138,9:5719,11:15113,12:3138,13:14377,18:500,19:398


chrom: chrX
strand: -
right_annotated: ENSMUSG00000004317.14:Clcn5:protein_coding:8390
samples:
,0:31216,1:18363,2:375472,3:98084,4:154188,5:331246,6:482773,7:123360,8:240885,9:182815,10:200913,11:224926,12:86,13:9463,14:13642,15:3623,16:16678,17:400,18:12322,19:391


chrom: chrX
strand: -
right_annotated: ENSMUSG00000046269.16:Usp27x:protein_coding:4277
samples:
,0:20235,1:10384,2:43410,3:33830,4:59628,5:130543,6:25704,7:5418,8:15345,9:3572,11:29389,12:29,13:61,14:10960,15:400,16:737,17:10043,18:6331,19:5113


chrom: chrX
strand: -
right_annotated: ENSMUSG00000063018.6:2010204K13Rik:processed_transcript:885
samples:
,0:4738,1:2339,2:8985,3:13864,4:13116,5:30229,6:28552,7:2963,8:5460,9:3620,10:35541,11:10789,12:1349,14:6507,15:1552,16:6542,17:8107,18:2577,19:3053


chrom: chrX
strand: -
right_annotated: ENSMUSG00000039556.16:Ppp1r3f:protein_coding:4760
samples:
,0:10186,1:6951,2:28965,3:12171,4:9237,5:16538,6:35063,7:8895,8:2477,9:19503,10:2527,11:562,14:27801,15:4650,16:23077,17:18477,18:19233,19:19863


chrom: chrX
strand: -
right_annotated: ENSMUSG00000103436.1:Gm36995:processed_transcript:5727
samples:
,0:15313,1:8363,2:132745,3:91230,4:44643,5:66325,6:62255,7:19171,8:60942,9:51472,10:2527,11:259665,12:55562,13:1680,14:79164,15:60158,16:101866,17:128328,18:84470,19:82114


chrom: chrX
strand: +
right_annotated: ENSMUSG00000039545.15:Flicr:antisense_RNA:3455
samples:
,0:1917,1:2191,2:3240,3:1266,4:1324,5:2711,6:19807,7:2565,8:56,11:70,14:561,15:635,16:453,17:510,18:524,19:290


chrom: chrX
strand: +
right_annotated: ENSMUSG00000039521.12:Foxp3:protein_coding:3989
samples:
,0:3867,1:2078,2:40015,3:29334,4:12923,5:18626,6:25750,7:7144,8:15680,9:16280,11:118676,12:13848,13:2636,14:18117,15:15899,16:23112,17:36343,18:17661,19:23381


chrom: chrX
strand: -
right_annotated: ENSMUSG00000031143.4:Ccdc22:protein_coding:2353
samples:
,0:8436,1:3627,2:113463,3:83917,4:38406,5:56278,6:36133,7:11175,8:63890,9:42456,11:292430,12:50126,13:2645,14:54812,15:60290,16:88005,17:122711,18:73176,19:74944


chrom: chrX
strand: +
right_annotated: ENSMUSG00000031144.15:Syp:protein_coding:2591
samples:
,0:1355,1:750,2:17805,3:17899,4:5545,5:6481,6:12320,7:131,8:7968,9:89,11:11189,12:24119,13:29327,14:2118832,15:1920050,16:2995038,17:2455642,18:2348258,19:2169961


chrom: chrX
strand: -
right_annotated: ENSMUSG00000087644.1:Gm14703:antisense_RNA:1820
samples:
,0:491,1:356,2:11991,3:9668,4:2689,5:3805,6:12599,7:522,8:3276,9:89,10:33,11:6872,12:9307,13:13883,14:797031,15:726791,16:1155672,17:887814,18:950828,19:796531


chrom: chrX
strand: +
right_annotated: ENSMUSG00000031145.15:Prickle3:protein_coding:2617
samples:
,0:1422,1:1461,2:85656,3:43134,4:23075,5:23597,6:132565,7:24498,8:83435,9:41074,10:229787,11:89767,12:36627,13:11111,14:2409,15:1671,16:7517,17:2205,18:2103,19:452


chrom: chrX
strand: -
right_annotated: ENSMUSG00000031146.6:Plp2:protein_coding:1157
samples:
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chrom: chrX
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samples:
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chrom: chrX
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samples:
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chrom: chrX
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samples:
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chrom: chrX
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samples:
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chrom: chrX
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samples:
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chrom: chrX
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samples:
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chrom: chrX
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samples:
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chrom: chrX
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samples:
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chrom: chrX
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samples:
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chrom: chrX
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samples:
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chrom: chrX
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samples:
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chrom: chrX
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samples:
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chrom: chrX
strand: -
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samples:
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chrom: chrX
strand: +
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samples:
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chrom: chrX
strand: +
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samples:
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chrom: chrX
strand: -
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samples:
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chrom: chrX
strand: -
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samples:
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chrom: chrX
strand: +
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samples:
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chrom: chrX
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samples:
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chrom: chrX
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samples:
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chrom: chrX
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samples:
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chrom: chrX
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samples:
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chrom: chrX
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samples:
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chrom: chrX
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samples:
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chrom: chrX
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samples:
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chrom: chrX
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samples:
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chrom: chrX
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samples:
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chrom: chrX
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samples:
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chrom: chrX
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samples:
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chrom: chrX
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samples:
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chrom: chrX
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samples:
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chrom: chrX
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samples:
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chrom: chrX
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samples:
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chrom: chrX
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samples:
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chrom: chrX
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samples:
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chrom: chrX
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samples:
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chrom: chrX
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samples:
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chrom: chrX
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samples:
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chrom: chrX
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samples:
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chrom: chrX
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samples:
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chrom: chrX
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samples:
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chrom: chrX
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samples:
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chrom: chrX
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samples:
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chrom: chrX
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samples:
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chrom: chrX
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samples:
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chrom: chrX
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samples:
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chrom: chrX
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samples:
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chrom: chrX
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samples:
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chrom: chrX
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samples:
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chrom: chrX
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samples:
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chrom: chrX
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samples:
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chrom: chrX
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samples:
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chrom: chrX
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samples:
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chrom: chrX
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samples:
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chrom: chrX
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samples:
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chrom: chrX
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samples:
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chrom: chrX
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samples:
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samples:
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samples:
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samples:
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samples:
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samples:
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chrom: chrX
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samples:
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samples:
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samples:
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chrom: chrX
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samples:
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chrom: chrX
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samples:
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chrom: chrX
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samples:
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chrom: chrX
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samples:
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chrom: chrX
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chrom: chrX
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samples:
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chrom: chrX
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samples:
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chrom: chrX
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samples:
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chrom: chrX
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samples:
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chrom: chrX
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chrom: chrX
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samples:
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chrom: chrX
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chrom: chrX
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chrom: chrX
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samples:
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chrom: chrX
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samples:
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samples:
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chrom: chrX
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chrom: chrX
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samples:
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chrom: chrX
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chrom: chrX
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samples:
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chrom: chrX
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samples:
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samples:
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chrom: chrX
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samples:
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chrom: chrX
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samples:
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chrom: chrX
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samples:
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chrom: chrX
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samples:
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chrom: chrX
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samples:
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chrom: chrX
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samples:
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chrom: chrX
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samples:
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chrom: chrX
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samples:
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chrom: chrX
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samples:
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chrom: chrX
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samples:
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chrom: chrX
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samples:
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chrom: chrX
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samples:
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chrom: chrX
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samples:
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chrom: chrX
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samples:
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chrom: chrX
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samples:
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chrom: chrX
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samples:
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chrom: chrX
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samples:
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chrom: chrX
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samples:
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chrom: chrX
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samples:
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chrom: chrX
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samples:
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chrom: chrX
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samples:
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chrom: chrX
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samples:
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chrom: chrX
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samples:
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chrom: chrX
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chrom: chrX
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samples:
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chrom: chrX
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samples:
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chrom: chrX
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samples:
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chrom: chrX
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samples:
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chrom: chrX
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samples:
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chrom: chrX
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samples:
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chrom: chrX
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samples:
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chrom: chrX
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samples:
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chrom: chrX
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samples:
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chrom: chrX
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samples:
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chrom: chrX
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samples:
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chrom: chrX
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samples:
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chrom: chrX
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samples:
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chrom: chrX
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samples:
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chrom: chrX
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samples:
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chrom: chrX
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samples:
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chrom: chrX
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samples:
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chrom: chrX
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samples:
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chrom: chrX
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samples:
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chrom: chrX
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samples:
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chrom: chrX
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samples:
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chrom: chrX
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samples:
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chrom: chrX
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samples:
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chrom: chrX
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samples:
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chrom: chrX
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samples:
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chrom: chrX
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samples:
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chrom: chrX
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samples:
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chrom: chrX
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samples:
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chrom: chrX
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samples:
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chrom: chrX
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samples:
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chrom: chrX
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samples:
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chrom: chrX
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samples:
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chrom: chrX
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samples:
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chrom: chrX
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samples:
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chrom: chrX
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samples:
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chrom: chrX
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samples:
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chrom: chrX
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samples:
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chrom: chrX
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samples:
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chrom: chrX
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samples:
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chrom: chrX
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samples:
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chrom: chrX
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samples:
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chrom: chrX
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samples:
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chrom: chrX
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samples:
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chrom: chrX
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samples:
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chrom: chrX
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samples:
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chrom: chrX
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samples:
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chrom: chrX
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samples:
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chrom: chrX
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samples:
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chrom: chrX
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samples:
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chrom: chrX
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samples:
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chrom: chrX
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samples:
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chrom: chrX
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samples:
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chrom: chrX
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samples:
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chrom: chrX
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samples:
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chrom: chrX
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samples:
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chrom: chrX
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samples:
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chrom: chrX
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samples:
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samples:
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samples:
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samples:
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samples:
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chrom: chrX
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samples:
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chrom: chrX
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samples:
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chrom: chrX
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samples:
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samples:
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chrom: chrX
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samples:
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chrom: chrX
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samples:
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chrom: chrX
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samples:
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chrom: chrX
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samples:
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chrom: chrX
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samples:
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chrom: chrX
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samples:
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chrom: chrX
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samples:
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chrom: chrX
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samples:
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chrom: chrX
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samples:
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chrom: chrX
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samples:
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chrom: chrX
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samples:
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chrom: chrX
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samples:
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chrom: chrX
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samples:
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chrom: chrX
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samples:
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chrom: chrX
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samples:
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chrom: chrX
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samples:
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chrom: chrX
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samples:
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chrom: chrX
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samples:
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chrom: chrX
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samples:
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chrom: chrX
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samples:
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chrom: chrX
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samples:
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chrom: chrX
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samples:
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chrom: chrX
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samples:
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chrom: chrX
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samples:
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chrom: chrX
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samples:
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chrom: chrX
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samples:
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chrom: chrX
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samples:
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chrom: chrX
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samples:
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chrom: chrX
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samples:
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chrom: chrX
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samples:
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chrom: chrX
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samples:
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chrom: chrX
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samples:
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chrom: chrX
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samples:
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chrom: chrX
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samples:
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chrom: chrX
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samples:
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chrom: chrX
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samples:
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chrom: chrX
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samples:
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chrom: chrX
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samples:
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chrom: chrX
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samples:
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chrom: chrX
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samples:
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chrom: chrX
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samples:
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chrom: chrX
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samples:
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chrom: chrX
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samples:
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chrom: chrX
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samples:
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chrom: chrX
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samples:
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chrom: chrX
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samples:
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chrom: chrX
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samples:
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chrom: chrX
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samples:
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chrom: chrX
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samples:
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chrom: chrX
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chrom: chrX
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samples:
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chrom: chrX
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samples:
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chrom: chrX
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samples:
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chrom: chrX
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samples:
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chrom: chrX
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samples:
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chrom: chrX
strand: +
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samples:
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chrom: chrX
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samples:
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chrom: chrX
strand: +
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samples:
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chrom: chrX
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samples:
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chrom: chrX
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samples:
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chrom: chrX
strand: +
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samples:
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chrom: chrX
strand: +
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samples:
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chrom: chrX
strand: +
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samples:
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chrom: chrX
strand: +
right_annotated: ENSMUSG00000031398.13:Plxna3:protein_coding:6943
samples:
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chrom: chrX
strand: -
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samples:
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chrom: chrX
strand: -
right_annotated: ENSMUSG00000015290.15:Ubl4a:protein_coding:2785
samples:
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chrom: chrX
strand: -
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samples:
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chrom: chrX
strand: -
right_annotated: ENSMUSG00000031399.15:Fam3a:protein_coding:1920
samples:
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chrom: chrX
strand: +
right_annotated: ENSMUSG00000004221.16:Ikbkg:protein_coding:7331
samples:
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chrom: chrX
strand: -
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samples:
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chrom: chrX
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samples:
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chrom: chrX
strand: +
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samples:
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chrom: chrX
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samples:
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chrom: chrX
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samples:
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chrom: chrX
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samples:
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chrom: chrX
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samples:
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chrom: chrX
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samples:
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chrom: chrX
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samples:
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chrom: chrX
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samples:
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chrom: chrX
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samples:
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chrom: chrX
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samples:
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chrom: chrX
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samples:
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chrom: chrX
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samples:
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chrom: chrX
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samples:
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chrom: chrX
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samples:
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chrom: chrX
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samples:
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chrom: chrX
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samples:
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chrom: chrX
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samples:
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chrom: chrX
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samples:
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chrom: chrX
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samples:
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chrom: chrX
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samples:
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chrom: chrX
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samples:
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chrom: chrX
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samples:
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chrom: chrX
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samples:
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chrom: chrX
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samples:
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chrom: chrX
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samples:
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chrom: chrX
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samples:
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chrom: chrX
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samples:
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chrom: chrX
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samples:
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chrom: chrX
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samples:
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chrom: chrX
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samples:
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chrom: chrX
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samples:
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chrom: chrX
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samples:
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chrom: chrX
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samples:
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chrom: chrX
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samples:
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chrom: chrX
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samples:
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chrom: chrX
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samples:
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samples:
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chrom: chrX
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samples:
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chrom: chrX
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samples:
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chrom: chrX
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samples:
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chrom: chrX
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samples:
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chrom: chrX
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samples:
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chrom: chrX
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samples:
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chrom: chrX
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samples:
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chrom: chrX
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samples:
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chrom: chrX
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samples:
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chrom: chrX
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samples:
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chrom: chrX
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samples:
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chrom: chrX
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samples:
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chrom: chrX
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samples:
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chrom: chrX
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samples:
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chrom: chrX
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samples:
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chrom: chrX
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samples:
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chrom: chrX
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samples:
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chrom: chrX
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samples:
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chrom: chrX
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samples:
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chrom: chrX
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samples:
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chrom: chrX
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samples:
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chrom: chrX
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samples:
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chrom: chrX
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samples:
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chrom: chrX
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samples:
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chrom: chrX
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samples:
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chrom: chrX
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samples:
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chrom: chrX
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samples:
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chrom: chrX
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samples:
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chrom: chrX
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samples:
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chrom: chrX
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samples:
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chrom: chrX
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samples:
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chrom: chrX
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samples:
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chrom: chrX
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samples:
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chrom: chrX
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samples:
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chrom: chrX
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samples:
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chrom: chrX
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samples:
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chrom: chrX
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samples:
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chrom: chrX
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samples:
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chrom: chrX
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samples:
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chrom: chrX
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samples:
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chrom: chrX
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samples:
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chrom: chrX
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samples:
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chrom: chrX
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samples:
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chrom: chrX
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samples:
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chrom: chrX
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samples:
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chrom: chrX
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samples:
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chrom: chrX
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samples:
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chrom: chrX
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samples:
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chrom: chrX
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samples:
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chrom: chrX
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samples:
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chrom: chrX
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samples:
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chrom: chrX
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samples:
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chrom: chrX
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samples:
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chrom: chrX
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samples:
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chrom: chrX
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samples:
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chrom: chrX
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samples:
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chrom: chrX
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samples:
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samples:
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samples:
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chrom: chrX
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samples:
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chrom: chrX
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samples:
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chrom: chrX
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samples:
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chrom: chrX
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samples:
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samples:
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chrom: chrX
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samples:
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chrom: chrX
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samples:
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chrom: chrX
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samples:
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chrom: chrX
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samples:
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chrom: chrX
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samples:
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chrom: chrX
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samples:
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chrom: chrX
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samples:
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chrom: chrX
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chrom: chrX
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chrom: chrX
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samples:
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chrom: chrX
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chrom: chrX
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samples:
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chrom: chrX
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samples:
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chrom: chrX
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samples:
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chrom: chrX
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samples:
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chrom: chrX
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samples:
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chrom: chrX
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samples:
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chrom: chrX
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samples:
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chrom: chrX
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samples:
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chrom: chrX
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samples:
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chrom: chrX
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samples:
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chrom: chrX
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samples:
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chrom: chrX
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chrom: chrX
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samples:
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chrom: chrX
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samples:
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chrom: chrX
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samples:
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chrom: chrX
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samples:
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chrom: chrX
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samples:
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chrom: chrX
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samples:
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chrom: chrX
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samples:
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chrom: chrX
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samples:
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chrom: chrX
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samples:
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chrom: chrX
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chrom: chrX
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samples:
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chrom: chrX
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samples:
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chrom: chrX
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samples:
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chrom: chrX
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samples:
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chrom: chrX
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samples:
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chrom: chrX
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samples:
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chrom: chrX
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samples:
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chrom: chrX
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samples:
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chrom: chrX
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samples:
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chrom: chrX
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samples:
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chrom: chrX
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samples:
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chrom: chrX
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samples:
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chrom: chrX
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samples:
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chrom: chrX
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samples:
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chrom: chrX
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samples:
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chrom: chrX
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samples:
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chrom: chrX
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samples:
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chrom: chrX
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samples:
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chrom: chrX
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samples:
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chrom: chrX
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samples:
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chrom: chrX
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samples:
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chrom: chrX
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samples:
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chrom: chrX
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samples:
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chrom: chrX
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samples:
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chrom: chrX
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samples:
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chrom: chrX
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samples:
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chrom: chrX
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samples:
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chrom: chrX
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samples:
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chrom: chrX
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samples:
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chrom: chrX
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samples:
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chrom: chrX
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samples:
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chrom: chrX
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samples:
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chrom: chrX
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samples:
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chrom: chrX
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samples:
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chrom: chrX
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samples:
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chrom: chrX
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samples:
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chrom: chrX
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samples:
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chrom: chrX
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samples:
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chrom: chrX
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samples:
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chrom: chrX
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samples:
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chrom: chrX
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samples:
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chrom: chrX
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samples:
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chrom: chrX
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samples:
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chrom: chrX
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samples:
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chrom: chrX
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samples:
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chrom: chrX
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samples:
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chrom: chrX
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samples:
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chrom: chrX
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samples:
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chrom: chrX
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samples:
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chrom: chrX
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samples:
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chrom: chrX
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samples:
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chrom: chrX
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samples:
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chrom: chrX
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samples:
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chrom: chrX
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samples:
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chrom: chrX
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samples:
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chrom: chrX
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samples:
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chrom: chrX
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samples:
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chrom: chrX
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samples:
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chrom: chrX
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samples:
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chrom: chrX
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samples:
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chrom: chrX
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samples:
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chrom: chrX
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samples:
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chrom: chrX
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samples:
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chrom: chrX
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samples:
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chrom: chrX
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samples:
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chrom: chrX
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samples:
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chrom: chrX
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samples:
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chrom: chrX
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samples:
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chrom: chrX
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samples:
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chrom: chrX
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samples:
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chrom: chrX
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samples:
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chrom: chrX
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samples:
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chrom: chrX
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samples:
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chrom: chrX
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samples:
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chrom: chrX
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samples:
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chrom: chrX
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chrom: chrX
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samples:
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chrom: chrX
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samples:
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chrom: chrX
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samples:
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chrom: chrX
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samples:
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chrom: chrX
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samples:
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chrom: chrX
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samples:
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chrom: chrX
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samples:
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chrom: chrX
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samples:
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chrom: chrX
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samples:
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chrom: chrX
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samples:
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chrom: chrX
strand: +
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samples:
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chrom: chrX
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samples:
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chrom: chrX
strand: +
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samples:
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chrom: chrX
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samples:
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chrom: chrX
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samples:
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chrom: chrX
strand: +
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samples:
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chrom: chrX
strand: -
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samples:
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chrom: chrX
strand: +
right_annotated: ENSMUSG00000087368.7:BC065397:processed_transcript:3201
samples:
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chrom: chrX
strand: +
right_annotated: ENSMUSG00000031425.15:Plp1:protein_coding:4699
samples:
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chrom: chrX
strand: -
right_annotated: ENSMUSG00000043463.6:Rab9b:protein_coding:3980
samples:
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chrom: chrX
strand: +
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samples:
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chrom: chrX
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samples:
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chrom: chrX
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samples:
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chrom: chrX
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samples:
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chrom: chrX
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samples:
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chrom: chrX
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samples:
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chrom: chrX
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samples:
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chrom: chrX
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samples:
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chrom: chrX
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samples:
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chrom: chrX
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samples:
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chrom: chrX
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samples:
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chrom: chrX
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samples:
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chrom: chrX
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samples:
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chrom: chrX
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samples:
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chrom: chrX
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samples:
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chrom: chrX
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samples:
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chrom: chrX
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samples:
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chrom: chrX
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samples:
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chrom: chrX
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samples:
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chrom: chrX
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samples:
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chrom: chrX
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samples:
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chrom: chrX
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samples:
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chrom: chrX
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samples:
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chrom: chrX
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samples:
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chrom: chrX
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samples:
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chrom: chrX
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samples:
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chrom: chrX
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samples:
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chrom: chrX
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samples:
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chrom: chrX
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samples:
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chrom: chrX
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samples:
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chrom: chrX
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samples:
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chrom: chrX
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samples:
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chrom: chrX
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samples:
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chrom: chrX
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samples:
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chrom: chrX
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samples:
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chrom: chrX
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samples:
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chrom: chrX
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samples:
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samples:
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chrom: chrX
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samples:
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chrom: chrX
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samples:
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chrom: chrX
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samples:
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chrom: chrX
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samples:
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chrom: chrX
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samples:
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chrom: chrX
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chrom: chrX
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chrom: chrX
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samples:
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chrom: chrX
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samples:
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chrom: chrX
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samples:
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chrom: chrX
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samples:
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chrom: chrX
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samples:
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chrom: chrX
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samples:
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chrom: chrX
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samples:
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chrom: chrX
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samples:
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chrom: chrX
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samples:
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chrom: chrX
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samples:
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chrom: chrX
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samples:
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chrom: chrX
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samples:
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chrom: chrX
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samples:
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chrom: chrX
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samples:
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chrom: chrX
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samples:
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chrom: chrX
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samples:
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chrom: chrX
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samples:
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chrom: chrX
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samples:
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chrom: chrX
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samples:
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chrom: chrX
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samples:
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chrom: chrX
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samples:
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chrom: chrX
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samples:
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chrom: chrX
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samples:
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chrom: chrX
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samples:
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chrom: chrX
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samples:
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chrom: chrX
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samples:
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chrom: chrX
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samples:
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chrom: chrX
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samples:
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chrom: chrX
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samples:
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chrom: chrX
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samples:
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chrom: chrX
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samples:
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chrom: chrX
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samples:
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chrom: chrX
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samples:
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chrom: chrX
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samples:
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chrom: chrX
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samples:
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chrom: chrX
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samples:
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chrom: chrX
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samples:
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chrom: chrX
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samples:
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chrom: chrX
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samples:
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chrom: chrX
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samples:
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chrom: chrX
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samples:
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chrom: chrX
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samples:
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chrom: chrX
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samples:
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chrom: chrX
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samples:
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chrom: chrX
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samples:
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chrom: chrX
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samples:
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chrom: chrX
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samples:
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chrom: chrX
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samples:
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chrom: chrX
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samples:
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chrom: chrX
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samples:
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samples:
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samples:
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chrom: chrX
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samples:
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samples:
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samples:
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chrom: chrX
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samples:
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chrom: chrX
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samples:
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chrom: chrX
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samples:
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chrom: chrX
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samples:
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chrom: chrX
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samples:
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chrom: chrX
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samples:
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chrom: chrX
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samples:
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chrom: chrX
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samples:
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chrom: chrX
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chrom: chrX
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samples:
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chrom: chrX
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samples:
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chrom: chrX
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chrom: chrX
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samples:
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chrom: chrX
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samples:
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chrom: chrX
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samples:
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chrom: chrX
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samples:
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chrom: chrX
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samples:
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chrom: chrX
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chrom: chrX
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samples:
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chrom: chrX
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samples:
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chrom: chrX
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samples:
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chrom: chrX
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samples:
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chrom: chrX
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samples:
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chrom: chrX
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samples:
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chrom: chrX
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samples:
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chrom: chrX
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samples:
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chrom: chrX
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samples:
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samples:
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chrom: chrX
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samples:
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chrom: chrX
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samples:
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chrom: chrX
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chrom: chrX
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samples:
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chrom: chrX
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samples:
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chrom: chrX
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samples:
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chrom: chrX
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samples:
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chrom: chrX
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samples:
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chrom: chrX
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samples:
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chrom: chrX
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samples:
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chrom: chrX
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samples:
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chrom: chrX
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samples:
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chrom: chrX
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samples:
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chrom: chrX
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samples:
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chrom: chrX
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samples:
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chrom: chrX
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chrom: chrX
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samples:
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chrom: chrX
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samples:
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chrom: chrX
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samples:
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chrom: chrX
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chrom: chrX
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samples:
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chrom: chrX
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samples:
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chrom: chrX
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right_annotated: ENSMUSG00000059461.7:Gm7331:processed_pseudogene:387
samples:
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chrom: chrX
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samples:
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chrom: chrX
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samples:
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chrom: chrX
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samples:
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chrom: chrX
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samples:
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chrom: chrX
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right_annotated: ENSMUSG00000031360.14:Ctps2:protein_coding:3808
samples:
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chrom: chrX
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samples:
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chrom: chrX
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samples:
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chrom: chrX
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right_annotated: ENSMUSG00000031373.4:Car5b:protein_coding:3436
samples:
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chrom: chrX
strand: -
right_annotated: ENSMUSG00000040749.11:Siah1b:protein_coding:1812
samples:
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chrom: chrX
strand: +
right_annotated: ENSMUSG00000031379.13:Pir:protein_coding:1599
samples:
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chrom: chrX
strand: +
right_annotated: ENSMUSG00000031380.10:Vegfd:protein_coding:2049
samples:
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chrom: chrX
strand: +
right_annotated: ENSMUSG00000031381.16:Piga:protein_coding:3654
samples:
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chrom: chrX
strand: -
right_annotated: ENSMUSG00000061778.10:Mospd2:protein_coding:3190
samples:
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chrom: chrX
strand: +
right_annotated: ENSMUSG00000047757.16:Fancb:protein_coding:2983
samples:
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chrom: chrX
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right_annotated: ENSMUSG00000082134.1:Gm15236:processed_pseudogene:379
samples:
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chrom: chrX
strand: +
right_annotated: ENSMUSG00000040621.14:Gemin8:protein_coding:2206
samples:
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chrom: chrX
strand: +
right_annotated: ENSMUSG00000031342.17:Gpm6b:protein_coding:4990
samples:
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chrom: chrX
strand: -
right_annotated: ENSMUSG00000040586.8:Ofd1:protein_coding:4453
samples:
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chrom: chrX
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right_annotated: ENSMUSG00000079317.10:Trappc2:protein_coding:1684
samples:
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chrom: chrX
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right_annotated: ENSMUSG00000079316.10:Rab9:protein_coding:1447
samples:
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chrom: chrX
strand: +
right_annotated: ENSMUSG00000081875.1:Gm15223:processed_pseudogene:826
samples:
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chrom: chrX
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samples:
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chrom: chrX
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samples:
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chrom: chrX
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samples:
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chrom: chrX
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samples:
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chrom: chrX
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samples:
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chrom: chrX
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samples:
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chrom: chrX
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samples:
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chrom: chrX
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samples:
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chrom: chrX
strand: -
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samples:
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chrom: chrX
strand: +
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samples:
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chrom: chrX
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samples:
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chrom: chrX
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samples:
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chrom: chrX
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samples:
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chrom: chrX
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samples:
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chrom: chrX
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samples:
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chrom: chrX
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samples:
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chrom: chrX
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samples:
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chrom: chrY
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samples:
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chrom: chrY
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samples:
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chrom: chrY
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samples:
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chrom: chrY
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samples:
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chrom: chrY
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samples:
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chrom: chrY
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samples:
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chrom: chrY
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samples:
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chrom: chrY
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samples:
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chrom: chrY
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samples:
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chrom: chrY
strand: +
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samples:
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chrom: chrY
strand: +
right_annotated: ENSMUSG00000095134.2:Mid1-ps1:unprocessed_pseudogene:1248
samples:
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chrom: chrY
strand: -
right_annotated: ENSMUSG00000095366.1:Gm21860:protein_coding:309
samples:
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chrom: chrY
strand: +
right_annotated: ENSMUSG00000096768.7:Erdr1:protein_coding:1124
samples:
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chrom: chrY
strand: +
right_annotated: ENSMUSG00000099871.1:Gm21742:unprocessed_pseudogene:548
samples:
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chrom: chrY
strand: -
right_annotated: ENSMUSG00000096850.1:Gm21748:protein_coding:309
samples:
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