# intron

chrom: chr1
strand: -
right_annotated: ENSMUSG00000051951.5:Xkr4:protein_coding:3634
samples:
,1:100,2:690,3:841,4:1689,5:2330,6:383,7:3329,9:2773,14:16421,15:33357,16:44289,17:22315,18:17966,19:12353


chrom: chr1
strand: +
right_annotated: ENSMUSG00000103147.1:Gm7341:processed_pseudogene:926
samples:
,0:196,1:248,2:4367,3:1797,4:1538,5:3440,6:180,11:48,12:358,13:866,14:1079,15:100,16:976,17:536,18:289,19:99


chrom: chr1
strand: -
right_annotated: ENSMUSG00000102331.1:Gm19938:sense_intronic:3259
samples:
,2:12,3:7,5:50,6:45432,7:7903,8:15,9:579,10:17,11:4117,13:9,14:3294,15:1862,16:2649,17:2735,18:255,19:718


chrom: chr1
strand: +
right_annotated: ENSMUSG00000102269.1:Gm7357:processed_pseudogene:2991
samples:
,0:2848,1:2047,2:17217,3:13352,4:15159,5:27447,6:66,8:56,11:1160,13:258,15:650,16:100,18:2128,19:250


chrom: chr1
strand: +
right_annotated: ENSMUSG00000102735.1:Gm7369:processed_pseudogene:936
samples:
,0:5458,1:2800,2:396,3:380,4:226,5:144,6:6104,7:1272,8:8854,9:5623,10:4612,11:3384,12:737,13:1353,14:1873,15:880,16:432,17:1409,18:1866,19:1210


chrom: chr1
strand: -
right_annotated: ENSMUSG00000098104.1:Gm6085:processed_pseudogene:1470
samples:
,0:18634,1:13554,2:60726,3:37752,4:21924,5:29951,6:19701,7:1717,8:8514,9:6593,10:16169,11:4649,12:2856,13:793,14:9531,15:5234,16:10750,17:10215,18:20822,19:12982


chrom: chr1
strand: -
right_annotated: ENSMUSG00000102175.1:Gm6119:processed_pseudogene:1206
samples:
,0:3106,1:1527,2:4769,3:2239,4:1470,5:2596,6:317,7:351,8:70,13:235,14:33,16:137,17:320,18:47,19:1466


chrom: chr1
strand: +
right_annotated: ENSMUSG00000103922.1:Gm6123:processed_pseudogene:1069
samples:
,0:141097,1:80631,2:138384,3:94798,4:52523,5:95762,6:211082,7:28350,8:192876,9:140507,10:338326,11:344927,12:64462,13:50095,14:131284,15:73240,16:148827,17:140486,18:178899,19:114278


chrom: chr1
strand: -
right_annotated: ENSMUSG00000033845.13:Mrpl15:protein_coding:5289
samples:
,0:87308,1:55222,2:155639,3:109000,4:49545,5:78712,6:569721,7:73773,8:382357,9:327543,10:456374,11:812717,12:168328,13:78144,14:105790,15:59243,16:90992,17:73134,18:86963,19:77713


chrom: chr1
strand: -
right_annotated: ENSMUSG00000102275.1:Gm37144:TEC:1150
samples:
,0:236,1:202,2:1193,3:679,4:790,5:799,6:5966,7:2395,8:2784,9:1906,10:1210,11:2936,12:913,13:1286,14:169,15:424,16:677,17:445,18:367,19:386


chrom: chr1
strand: +
right_annotated: ENSMUSG00000025903.14:Lypla1:protein_coding:2661
samples:
,0:276440,1:175791,2:335854,3:174095,4:108817,5:171650,6:1875901,7:415057,8:504055,9:358238,10:343877,11:1369667,12:251819,13:109530,14:65677,15:35118,16:84662,17:29566,18:127730,19:50185


chrom: chr1
strand: +
right_annotated: ENSMUSG00000104217.1:Gm37988:protein_coding:825
samples:
,0:209113,1:134578,2:114879,3:59826,4:38789,5:59736,6:473885,7:73157,8:240089,9:169116,10:222064,11:515354,12:109497,13:57122,14:25263,15:15312,16:29451,17:16781,18:43838,19:23493


chrom: chr1
strand: +
right_annotated: ENSMUSG00000033813.15:Tcea1:protein_coding:3017
samples:
,0:69028,1:37272,2:312596,3:155029,4:98841,5:160901,6:1371016,7:346627,8:731842,9:515538,10:465293,11:756072,12:118939,13:109291,14:63071,15:36935,16:72903,17:57753,18:75043,19:55727


chrom: chr1
strand: -
right_annotated: ENSMUSG00000062588.4:Gm6104:processed_pseudogene:603
samples:
,0:30324,1:16274,2:123753,3:76373,4:114045,5:255314,6:165309,7:23686,8:124041,9:88818,10:160547,11:168831,12:49805,13:10576,14:29639,15:11958,16:28828,17:28972,18:43524,19:34091


chrom: chr1
strand: -
right_annotated: ENSMUSG00000002459.17:Rgs20:protein_coding:2514
samples:
,0:973,1:299,2:200,3:353,4:1938,5:1271,6:115209,7:18035,8:30749,9:35423,14:33353,15:23341,16:29477,17:33065,18:41456,19:17957


chrom: chr1
strand: +
right_annotated: ENSMUSG00000033793.12:Atp6v1h:protein_coding:2176
samples:
,0:197689,1:124975,2:529886,3:218223,4:156461,5:276778,6:1258383,7:212220,8:740244,9:784208,10:1245919,11:2723318,12:221652,13:74286,14:727372,15:473937,16:791280,17:641319,18:1129335,19:899304


chrom: chr1
strand: -
right_annotated: ENSMUSG00000104352.1:Gm7182:processed_pseudogene:732
samples:
,3:26,6:1845,7:242,8:896,9:478,10:1510,11:852,12:506,14:17296,15:9258,16:16268,17:27468,18:21219,19:15192


chrom: chr1
strand: -
right_annotated: ENSMUSG00000090031.2:4732440D04Rik:antisense_RNA:5428
samples:
,0:40042,1:25337,2:44557,3:18993,4:22308,5:42681,6:127198,7:21033,8:56078,9:54686,10:82957,11:92757,12:5404,14:24829,15:4170,16:9904,17:10708,18:9643,19:6643


chrom: chr1
strand: +
right_annotated: ENSMUSG00000025907.14:Rb1cc1:protein_coding:7607
samples:
,0:1617311,1:1103576,2:474970,3:229110,4:169362,5:309217,6:1185765,7:326650,8:289817,9:225130,10:635029,11:857662,12:103878,13:19918,14:183666,15:141099,16:197766,17:331453,18:163525,19:194616


chrom: chr1
strand: +
right_annotated: ENSMUSG00000103355.1:Gm2147:processed_pseudogene:639
samples:
,0:3128,1:1552,2:14660,3:5881,4:6355,5:9521,6:29638,7:6255,8:14678,9:13379,10:16748,11:25893,12:4278,13:3750,14:4145,15:2847,16:5329,17:4063,18:5381,19:3570


chrom: chr1
strand: -
right_annotated: ENSMUSG00000103845.1:Gm19026:processed_pseudogene:4530
samples:
,0:102336,1:72672,2:19514,3:9723,4:13702,5:25546,6:3190,7:188,8:3002,9:1047,11:1534,12:720,13:1530,14:9929,15:6752,16:5783,17:5085,18:7810,19:5832


chrom: chr1
strand: +
right_annotated: ENSMUSG00000102135.1:Gm37108:processed_pseudogene:626
samples:
,0:3591,1:2131,2:48219,3:34122,4:11572,5:13022,6:83692,7:17311,8:40250,9:29761,10:72574,11:36879,12:11142,13:6724,14:1054,15:1061,16:1537,17:1368,18:1610,19:1002


chrom: chr1
strand: +
right_annotated: ENSMUSG00000051285.17:Pcmtd1:protein_coding:5232
samples:
,0:28533,1:16912,2:506056,3:183477,4:203318,5:392059,6:1121210,7:349825,8:396531,9:267874,10:31202,11:924430,12:101969,13:60498,14:223800,15:96979,16:220852,17:137485,18:171975,19:111324


chrom: chr1
strand: -
right_annotated: ENSMUSG00000098201.1:Gm26983:processed_pseudogene:388
samples:
,0:13872,1:7420,2:77190,3:59713,4:15945,5:23153,6:3031,7:1056,8:2376,9:2063,10:3281,11:2082,12:180,13:229,16:50,18:48,19:50


chrom: chr1
strand: +
right_annotated: ENSMUSG00000048538.7:Gm9826:processed_pseudogene:1299
samples:
,0:20576,1:13887,2:116394,3:54634,4:44812,5:67476,6:35237,7:4167,8:16794,9:4900,10:3706,11:38079,12:646,13:10136,14:7943,15:11485,16:8124,17:10999,18:19351,19:15053


chrom: chr1
strand: -
right_annotated: ENSMUSG00000097797.6:Gm26901:lincRNA:1742
samples:
,0:2000,1:1343,2:3589,3:3415,4:2222,5:3107,6:18529,7:332,8:306,9:4089,10:12785,12:275,13:224,14:2125,16:2924,17:481,18:2767,19:1073


chrom: chr1
strand: +
right_annotated: ENSMUSG00000103903.1:Rps2-ps2:processed_pseudogene:881
samples:
,0:50,1:47,2:749,3:466,5:293,6:2276,7:741,8:488,9:445,10:591,11:961,12:245,14:289,15:48,16:324,17:47,18:385,19:96


chrom: chr1
strand: -
right_annotated: ENSMUSG00000025909.16:Sntg1:protein_coding:4887
samples:
,0:17830,1:11619,2:345,3:4939,4:2932,5:4892,6:125,14:20143,15:9245,16:32167,17:5863,18:28970,19:15067


chrom: chr1
strand: -
right_annotated: ENSMUSG00000084353.1:Gm15452:processed_pseudogene:240
samples:
,0:98897,1:56288,2:75259,3:69655,4:20731,5:36623,6:7899,7:5501,8:18367,9:9451,10:3841,11:1794,12:5467,14:155,15:391,16:50,18:644,19:333


chrom: chr1
strand: +
right_annotated: ENSMUSG00000103933.1:Gm36964:processed_pseudogene:198
samples:
,0:1128,1:1090,2:6441,3:5269,4:2051,5:2780,6:10505,7:1844,8:6432,9:5235,10:11246,11:10974,12:837,13:912,14:1381,15:1165,16:1905,17:1143,18:1778,19:1400


chrom: chr1
strand: +
right_annotated: ENSMUSG00000076135.1:Gm24276:miRNA:110
samples:
,0:123,1:34,2:961,3:503,4:174,5:408,6:15217,7:3675,8:6264,9:6074,10:8807,11:17524,12:1618,13:861,14:398,15:128,16:311,17:147,18:141,19:193


chrom: chr1
strand: -
right_annotated: ENSMUSG00000066693.2:Gm7493:processed_pseudogene:626
samples:
,0:2607,1:2399,2:4911,3:2509,4:2200,5:4239,6:5666,7:444,8:1893,9:859,10:3255,11:2014,12:1051,13:3816,14:3559,15:854,16:2875,17:3518,18:4790,19:2684


chrom: chr1
strand: -
right_annotated: ENSMUSG00000101571.2:Gm6187:processed_pseudogene:960
samples:
,0:49,1:50,2:1974,3:1065,4:146,5:408,6:400,7:83,8:282,9:237,10:742,11:827,12:131,14:241,15:100,16:292,18:95,19:216


chrom: chr1
strand: +
right_annotated: ENSMUSG00000061024.8:Rrs1:protein_coding:2048
samples:
,0:38669,1:19552,2:168118,3:75652,4:55980,5:99821,6:97796,7:11513,8:30143,9:7115,10:5896,11:66,12:321,13:11550,14:46015,15:20197,16:21931,17:39206,18:36048,19:19897


chrom: chr1
strand: +
right_annotated: ENSMUSG00000025911.14:Adhfe1:protein_coding:3239
samples:
,0:14340,1:5652,2:113404,3:37257,4:18152,5:22076,6:166939,7:26727,8:30645,9:25558,11:121603,15:185,17:454,18:439,19:103


chrom: chr1
strand: -
right_annotated: ENSMUSG00000079671.8:2610203C22Rik:processed_transcript:4561
samples:
,0:2190,1:1254,2:5099,3:2766,4:5919,5:12576,6:17418,7:5360,8:12165,9:11392,11:3843,14:322328,15:230586,16:320012,17:392765,18:209635,19:164078


chrom: chr1
strand: +
right_annotated: ENSMUSG00000081441.3:Gm6161:processed_pseudogene:1102
samples:
,0:41496,1:21475,2:126808,3:81105,4:33849,5:54799,6:35308,7:8946,8:31094,9:29134,10:56266,11:80908,12:4597,13:7864,14:1295,15:1940,16:1828,17:2599,18:3415,19:1772


chrom: chr1
strand: +
right_annotated: ENSMUSG00000067879.3:3110035E14Rik:protein_coding:3256
samples:
,0:14831,1:7993,2:200,3:1795,4:53609,5:150521,6:4863,7:2539,8:459,9:513,12:180,14:4687127,15:2913801,16:4505149,17:5018169,18:2848455,19:2225740


chrom: chr1
strand: -
right_annotated: ENSMUSG00000025912.16:Mybl1:protein_coding:4980
samples:
,0:211467,1:140908,2:32344,3:23630,4:71424,5:183917,6:114572,7:36232,8:17865,9:43743,13:32,14:500,15:606,16:2071,17:828,18:2250,19:599


chrom: chr1
strand: -
right_annotated: ENSMUSG00000045210.8:Vcpip1:protein_coding:9749
samples:
,0:203634,1:139006,2:337977,3:174180,4:255860,5:522451,6:1014029,7:155057,8:310477,9:248376,10:3292,11:742476,12:41690,14:110454,15:124172,16:250366,17:144002,18:137263,19:134953


chrom: chr1
strand: +
right_annotated: ENSMUSG00000097893.8:1700034P13Rik:antisense_RNA:2418
samples:
,0:21959,1:15236,2:11309,3:7914,4:11031,5:19439,6:2042,7:1448,8:5402,9:3490,10:70432,11:504,12:90,14:4108,15:3241,16:8303,17:5055,18:3198,19:4326


chrom: chr1
strand: +
right_annotated: ENSMUSG00000025915.14:Sgk3:protein_coding:4081
samples:
,0:92995,1:59962,2:86249,3:39661,4:149192,5:307520,6:86594,7:83400,8:114478,9:125961,11:1983,12:52908,13:17810,14:40800,15:13355,16:38915,17:10107,18:19777,19:20892


chrom: chr1
strand: -
right_annotated: ENSMUSG00000046334.4:Gm6195:processed_pseudogene:357
samples:
,0:2494,1:1697,2:25092,3:14887,4:4144,5:7132,6:20914,7:5373,8:27970,9:22338,10:29761,11:34902,12:8337,13:4284,14:1168,15:450,16:750,17:1222,18:391,19:249


chrom: chr1
strand: +
right_annotated: ENSMUSG00000046101.16:Mcmdc2:protein_coding:5916
samples:
,0:37702,1:21089,2:5216,3:703,4:226,5:1316,6:16848,7:4415,8:3031,9:30911,10:5234,11:2493,12:17199,13:264,14:22364,15:1389,16:3242,17:7122,18:4067,19:9367


chrom: chr1
strand: -
right_annotated: ENSMUSG00000098234.7:Snhg6:lincRNA:979
samples:
,0:15244,1:8105,2:117184,3:58056,4:29250,5:47226,6:505247,7:57830,8:167255,9:164952,10:468030,11:127653,12:254053,13:10782,14:13147,15:6365,16:20897,17:12822,18:30751,19:14162


chrom: chr1
strand: -
right_annotated: ENSMUSG00000093178.1:Snord87:snoRNA:87
samples:
,1:170,2:1146,3:1063,4:900,5:1586,6:11526,7:431,8:10169,9:4084,10:29130,12:7752,13:2503,15:29,16:82,18:864,19:649


chrom: chr1
strand: +
right_annotated: ENSMUSG00000104025.1:E330040D14Rik:TEC:1374
samples:
,0:3815,1:1912,2:1666,3:1071,4:1993,5:3451,6:1027,7:92,8:355,9:90,11:1793,12:92,14:37,15:141,16:70,19:107


chrom: chr1
strand: -
right_annotated: ENSMUSG00000025916.10:Ppp1r42:protein_coding:1425
samples:
,0:306426,1:201637,2:1098,3:974,4:460,5:1568,6:63917,7:13339,8:20386,9:26720,11:136924,12:5017,14:5542,15:4890,16:5359,18:63,19:5088


chrom: chr1
strand: -
right_annotated: ENSMUSG00000025917.9:Cops5:protein_coding:1698
samples:
,0:638981,1:412379,2:546040,3:294224,4:138739,5:233880,6:1113191,7:207601,8:633903,9:479925,10:822970,11:1656806,12:147440,13:198485,14:161382,15:76264,16:237205,17:196112,18:284507,19:239201


chrom: chr1
strand: +
right_annotated: ENSMUSG00000056763.16:Cspp1:protein_coding:6070
samples:
,0:198364,1:133139,2:120187,3:67977,4:54975,5:110585,6:1024741,7:223251,8:362034,9:261600,10:327931,11:493194,12:293513,13:13066,14:20050,15:18446,16:17580,17:1480,18:28334,19:7384


chrom: chr1
strand: -
right_annotated: ENSMUSG00000067851.11:Arfgef1:protein_coding:7097
samples:
,0:501761,1:334426,2:990399,3:311507,4:278163,5:496338,6:1836109,7:402318,8:783933,9:383455,10:260535,11:931614,12:66523,13:120951,14:168748,15:108593,16:134389,17:117823,18:90990,19:75810


chrom: chr1
strand: -
right_annotated: ENSMUSG00000042501.12:Cpa6:protein_coding:1932
samples:
,0:22087,1:9309,3:200,4:100,5:100,6:47402,7:29680,8:60456,9:28958,11:332583,12:43144,13:98061,14:10403,16:21847,17:3078,18:480,19:1605


chrom: chr1
strand: -
right_annotated: ENSMUSG00000083422.1:Gm15604:processed_pseudogene:1456
samples:
,0:99,1:50,2:1665,3:1253,4:816,5:781,6:53065,7:8485,8:18746,9:11453,10:26331,11:26575,12:4699,13:5891,14:20860,15:14718,16:16965,17:22071,18:14986,19:14331


chrom: chr1
strand: +
right_annotated: ENSMUSG00000100648.1:Gm28659:processed_pseudogene:759
samples:
,0:282,1:50,2:2849,3:1351,4:730,5:1159,6:15256,7:3477,8:18956,9:5121,10:21626,11:10053,12:3971,13:1600,14:9264,15:5982,16:9469,17:7608,18:11617,19:6348


chrom: chr1
strand: +
right_annotated: ENSMUSG00000048960.13:Prex2:protein_coding:11053
samples:
,0:5157,1:2541,2:55610,3:23632,4:32260,5:28928,6:212620,7:28542,8:115701,9:12432,10:6255,11:9301,12:50,13:88,14:4521,15:3802,16:2254,17:2287,18:5218,19:1082


chrom: chr1
strand: -
right_annotated: ENSMUSG00000101827.1:Gm28686:processed_pseudogene:609
samples:
,0:20,1:50,2:222,3:77,4:110,5:94,6:302,7:350,8:102,9:153,10:3,11:72,14:41,15:45,16:567,17:325,18:437,19:171


chrom: chr1
strand: +
right_annotated: ENSMUSG00000057715.13:A830018L16Rik:protein_coding:8282
samples:
,0:2700,1:1529,2:1199,3:2973,4:5267,5:4552,6:37821,7:31024,8:2209,9:8085,10:121770,11:290707,13:39197,14:355712,15:182269,16:388310,17:428128,18:338392,19:265024


chrom: chr1
strand: +
right_annotated: ENSMUSG00000101610.1:Gm7560:processed_pseudogene:873
samples:
,0:100,1:50,2:1595,3:832,4:576,5:1113,6:23031,7:2879,8:19878,9:10731,10:15623,11:18676,12:2956,13:2739,14:14429,15:4279,16:6552,17:9256,18:12575,19:6010


chrom: chr1
strand: +
right_annotated: ENSMUSG00000097628.1:Gm2383:processed_pseudogene:807
samples:
,0:300,1:44,2:2025,3:1203,4:809,5:1164,6:42126,7:8290,8:14618,9:13374,10:14972,11:14491,12:6454,13:5428,14:34134,15:38391,16:73882,17:43628,18:65524,19:45592


chrom: chr1
strand: +
right_annotated: ENSMUSG00000016918.15:Sulf1:protein_coding:7454
samples:
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samples:
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chrom: chr1
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samples:
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chrom: chr1
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samples:
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chrom: chr1
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samples:
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chrom: chr1
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samples:
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chrom: chr1
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samples:
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chrom: chr1
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samples:
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chrom: chr1
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samples:
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samples:
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chrom: chr1
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samples:
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chrom: chr1
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samples:
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chrom: chr1
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samples:
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chrom: chr1
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samples:
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chrom: chr1
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samples:
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chrom: chr1
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samples:
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chrom: chr1
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samples:
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chrom: chr1
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samples:
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chrom: chr1
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samples:
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chrom: chr1
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right_annotated: ENSMUSG00000102457.1:Gm38342:TEC:2980
samples:
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chrom: chr1
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samples:
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chrom: chr1
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right_annotated: ENSMUSG00000097744.1:D030040B21Rik:lincRNA:2788
samples:
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chrom: chr1
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samples:
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chrom: chr1
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right_annotated: ENSMUSG00000025940.6:Tmem70:protein_coding:1716
samples:
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chrom: chr1
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samples:
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chrom: chr1
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samples:
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chrom: chr1
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samples:
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chrom: chr1
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samples:
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chrom: chr1
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samples:
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chrom: chr1
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samples:
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chrom: chr1
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samples:
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chrom: chr1
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samples:
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chrom: chr1
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samples:
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chrom: chr1
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samples:
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chrom: chr1
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samples:
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chrom: chr1
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samples:
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chrom: chr1
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samples:
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chrom: chr1
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samples:
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chrom: chr1
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samples:
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chrom: chr1
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samples:
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chrom: chr1
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samples:
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chrom: chr1
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samples:
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chrom: chr1
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samples:
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chrom: chr1
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samples:
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chrom: chr1
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samples:
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chrom: chr1
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samples:
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chrom: chr1
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samples:
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chrom: chr1
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samples:
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chrom: chr1
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samples:
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chrom: chr1
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samples:
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chrom: chr1
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samples:
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chrom: chr1
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samples:
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chrom: chr1
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samples:
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chrom: chr1
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samples:
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chrom: chr1
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samples:
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chrom: chr1
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samples:
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chrom: chr1
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samples:
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chrom: chr1
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samples:
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chrom: chr1
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samples:
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chrom: chr1
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samples:
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samples:
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chrom: chr1
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samples:
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chrom: chr1
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samples:
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chrom: chr1
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samples:
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chrom: chr1
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samples:
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chrom: chr1
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samples:
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chrom: chr1
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samples:
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chrom: chr1
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samples:
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chrom: chr1
strand: +
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samples:
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chrom: chr1
strand: +
right_annotated: ENSMUSG00000100450.1:Gm9443:processed_pseudogene:816
samples:
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chrom: chr1
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samples:
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chrom: chr1
strand: +
right_annotated: ENSMUSG00000101514.1:Gm5524:lincRNA:2002
samples:
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chrom: chr1
strand: +
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samples:
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chrom: chr1
strand: -
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samples:
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chrom: chr1
strand: -
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samples:
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chrom: chr1
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samples:
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chrom: chr1
strand: +
right_annotated: ENSMUSG00000101726.1:Gm7858:processed_pseudogene:622
samples:
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chrom: chr1
strand: +
right_annotated: ENSMUSG00000100261.1:Gm6473:unprocessed_pseudogene:1210
samples:
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chrom: chr1
strand: -
right_annotated: ENSMUSG00000048874.15:Phf3:protein_coding:7568
samples:
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chrom: chr1
strand: -
right_annotated: ENSMUSG00000104315.1:Gm37906:TEC:3035
samples:
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chrom: chr1
strand: -
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samples:
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chrom: chr1
strand: +
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samples:
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chrom: chr1
strand: +
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samples:
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chrom: chr1
strand: +
right_annotated: ENSMUSG00000104498.1:Gm37110:TEC:1628
samples:
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chrom: chr1
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samples:
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chrom: chr1
strand: +
right_annotated: ENSMUSG00000102917.1:Gm37724:lincRNA:1221
samples:
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chrom: chr1
strand: +
right_annotated: ENSMUSG00000100481.1:Gm7114:processed_pseudogene:1789
samples:
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chrom: chr1
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samples:
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chrom: chr1
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samples:
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chrom: chr1
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samples:
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chrom: chr1
strand: +
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samples:
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chrom: chr1
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samples:
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chrom: chr1
strand: +
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samples:
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chrom: chr1
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samples:
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chrom: chr1
strand: +
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samples:
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chrom: chr1
strand: -
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samples:
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chrom: chr1
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samples:
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chrom: chr1
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samples:
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chrom: chr1
strand: +
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samples:
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chrom: chr1
strand: +
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samples:
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chrom: chr1
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samples:
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chrom: chr1
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samples:
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chrom: chr1
strand: +
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samples:
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chrom: chr1
strand: -
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samples:
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chrom: chr1
strand: -
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samples:
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chrom: chr1
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samples:
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chrom: chr1
strand: +
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samples:
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chrom: chr1
strand: +
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samples:
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chrom: chr1
strand: +
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samples:
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chrom: chr1
strand: -
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samples:
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chrom: chr1
strand: -
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samples:
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chrom: chr1
strand: +
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samples:
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chrom: chr1
strand: +
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samples:
,0:54414,1:38360,2:216699,3:88396,4:47889,5:57692,6:324440,7:47852,8:109008,9:80362,10:45480,11:738824,12:327028,13:166949,14:451540,15:281890,16:535202,17:524594,18:477424,19:423382


chrom: chr1
strand: -
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samples:
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chrom: chr1
strand: +
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samples:
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chrom: chr1
strand: +
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samples:
,0:16810,1:9009,2:328451,3:190860,4:209699,5:404551,6:236655,7:51543,8:95604,9:30036,10:10461,11:55337,12:42524,13:25420,14:6407,15:7024,16:8086,17:588,18:8055,19:9273


chrom: chr1
strand: -
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samples:
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chrom: chr1
strand: +
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samples:
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chrom: chr1
strand: -
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samples:
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chrom: chr1
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samples:
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chrom: chr1
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samples:
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chrom: chr1
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samples:
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chrom: chr1
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samples:
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chrom: chr1
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right_annotated: ENSMUSG00000037408.10:Cnnm4:protein_coding:4547
samples:
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chrom: chr1
strand: +
right_annotated: ENSMUSG00000001138.13:Cnnm3:protein_coding:5292
samples:
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chrom: chr1
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samples:
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chrom: chr1
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samples:
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chrom: chr1
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right_annotated: ENSMUSG00000079610.9:Ankrd39:protein_coding:2144
samples:
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chrom: chr1
strand: -
right_annotated: ENSMUSG00000026121.13:Sema4c:protein_coding:4260
samples:
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chrom: chr1
strand: +
right_annotated: ENSMUSG00000089906.1:Gm6428:processed_pseudogene:345
samples:
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chrom: chr1
strand: +
right_annotated: ENSMUSG00000061518.10:Cox5b:protein_coding:865
samples:
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chrom: chr1
strand: -
right_annotated: ENSMUSG00000037351.9:Actr1b:protein_coding:3248
samples:
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chrom: chr1
strand: -
right_annotated: ENSMUSG00000026116.11:Tmem131:protein_coding:6701
samples:
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chrom: chr1
strand: -
right_annotated: ENSMUSG00000102930.1:Gm38115:sense_intronic:2413
samples:
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chrom: chr1
strand: -
right_annotated: ENSMUSG00000080054.3:Rpl12-ps1:processed_pseudogene:498
samples:
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chrom: chr1
strand: +
right_annotated: ENSMUSG00000026113.17:Inpp4a:protein_coding:7717
samples:
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chrom: chr1
strand: -
right_annotated: ENSMUSG00000026112.7:Coa5:protein_coding:3863
samples:
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chrom: chr1
strand: +
right_annotated: ENSMUSG00000026111.15:Unc50:protein_coding:1445
samples:
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chrom: chr1
strand: -
right_annotated: ENSMUSG00000026110.15:Mgat4a:protein_coding:7368
samples:
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chrom: chr1
strand: -
right_annotated: ENSMUSG00000026090.16:2010300C02Rik:protein_coding:4634
samples:
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chrom: chr1
strand: -
right_annotated: ENSMUSG00000060771.14:Tsga10:protein_coding:7665
samples:
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chrom: chr1
strand: +
right_annotated: ENSMUSG00000037216.5:Lipt1:protein_coding:1485
samples:
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chrom: chr1
strand: -
right_annotated: ENSMUSG00000026088.15:Mitd1:protein_coding:1556
samples:
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chrom: chr1
strand: +
right_annotated: ENSMUSG00000026087.11:Mrpl30:protein_coding:973
samples:
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chrom: chr1
strand: -
right_annotated: ENSMUSG00000058407.12:Txndc9:protein_coding:6602
samples:
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chrom: chr1
strand: +
right_annotated: ENSMUSG00000026083.12:Eif5b:protein_coding:7797
samples:
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chrom: chr1
strand: -
right_annotated: ENSMUSG00000026082.11:Rev1:protein_coding:4262
samples:
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chrom: chr1
strand: -
right_annotated: ENSMUSG00000037138.17:Aff3:protein_coding:6014
samples:
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chrom: chr1
strand: +
right_annotated: ENSMUSG00000087131.7:Gm16152:antisense_RNA:1853
samples:
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chrom: chr1
strand: -
right_annotated: ENSMUSG00000048814.10:Lonrf2:protein_coding:6932
samples:
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chrom: chr1
strand: -
right_annotated: ENSMUSG00000026080.13:Chst10:protein_coding:5071
samples:
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chrom: chr1
strand: +
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samples:
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chrom: chr1
strand: +
right_annotated: ENSMUSG00000026078.10:Pdcl3:protein_coding:3914
samples:
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chrom: chr1
strand: -
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samples:
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chrom: chr1
strand: +
right_annotated: ENSMUSG00000026077.15:Npas2:protein_coding:4236
samples:
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chrom: chr1
strand: +
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samples:
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chrom: chr1
strand: +
right_annotated: ENSMUSG00000073702.11:Rpl31:protein_coding:1498
samples:
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chrom: chr1
strand: -
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samples:
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chrom: chr1
strand: +
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samples:
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chrom: chr1
strand: -
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samples:
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chrom: chr1
strand: -
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samples:
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chrom: chr1
strand: -
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samples:
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chrom: chr1
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samples:
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chrom: chr1
strand: +
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samples:
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chrom: chr1
strand: +
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samples:
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chrom: chr1
strand: -
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samples:
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chrom: chr1
strand: +
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samples:
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chrom: chr1
strand: +
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samples:
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chrom: chr1
strand: +
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samples:
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chrom: chr1
strand: +
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samples:
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chrom: chr1
strand: +
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samples:
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chrom: chr1
strand: -
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samples:
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chrom: chr1
strand: -
right_annotated: ENSMUSG00000060424.14:Pantr1:lincRNA:4060
samples:
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chrom: chr1
strand: +
right_annotated: ENSMUSG00000093436.6:Gm20646:sense_overlapping:1712
samples:
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chrom: chr1
strand: +
right_annotated: ENSMUSG00000045515.3:Pou3f3:protein_coding:7409
samples:
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chrom: chr1
strand: +
right_annotated: ENSMUSG00000060679.14:Mrps9:protein_coding:1418
samples:
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chrom: chr1
strand: -
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samples:
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samples:
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samples:
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samples:
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samples:
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samples:
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samples:
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samples:
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samples:
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samples:
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samples:
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chrom: chr1
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samples:
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chrom: chr1
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samples:
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chrom: chr1
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samples:
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chrom: chr1
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samples:
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chrom: chr1
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samples:
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chrom: chr1
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samples:
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chrom: chr1
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samples:
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chrom: chr1
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samples:
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chrom: chr1
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samples:
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chrom: chr1
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samples:
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samples:
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chrom: chr1
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samples:
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chrom: chr1
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samples:
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chrom: chr1
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samples:
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chrom: chr1
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samples:
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chrom: chr1
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chrom: chr1
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samples:
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chrom: chr1
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samples:
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chrom: chr1
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samples:
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chrom: chr1
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samples:
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chrom: chr1
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samples:
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chrom: chr1
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samples:
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chrom: chr1
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samples:
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chrom: chr1
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samples:
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chrom: chr1
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samples:
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chrom: chr1
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samples:
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samples:
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chrom: chr1
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samples:
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chrom: chr1
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samples:
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chrom: chr1
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samples:
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chrom: chr1
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samples:
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chrom: chr1
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samples:
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chrom: chr1
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samples:
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chrom: chr1
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samples:
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chrom: chr1
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samples:
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chrom: chr1
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samples:
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chrom: chr1
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samples:
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chrom: chr1
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samples:
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chrom: chr1
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samples:
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chrom: chr1
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samples:
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chrom: chr1
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samples:
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chrom: chr1
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samples:
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chrom: chr1
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samples:
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chrom: chr1
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samples:
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chrom: chr1
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samples:
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chrom: chr1
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samples:
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chrom: chr1
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samples:
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chrom: chr1
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samples:
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chrom: chr1
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samples:
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chrom: chr1
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samples:
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chrom: chr1
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samples:
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chrom: chr1
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samples:
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chrom: chr1
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samples:
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chrom: chr1
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samples:
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chrom: chr1
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right_annotated: ENSMUSG00000025982.13:Sf3b1:protein_coding:6195
samples:
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chrom: chr1
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samples:
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chrom: chr1
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right_annotated: ENSMUSG00000025981.13:Coq10b:protein_coding:1733
samples:
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chrom: chr1
strand: +
right_annotated: ENSMUSG00000101122.1:Gm17971:processed_pseudogene:806
samples:
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chrom: chr1
strand: -
right_annotated: ENSMUSG00000025980.14:Hspd1:protein_coding:2423
samples:
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chrom: chr1
strand: +
right_annotated: ENSMUSG00000073676.4:Hspe1:protein_coding:774
samples:
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chrom: chr1
strand: -
right_annotated: ENSMUSG00000100736.1:Gm5147:processed_pseudogene:794
samples:
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chrom: chr1
strand: +
right_annotated: ENSMUSG00000089670.1:Gm16581:processed_pseudogene:991
samples:
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chrom: chr1
strand: +
right_annotated: ENSMUSG00000025979.13:Mob4:protein_coding:2840
samples:
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chrom: chr1
strand: -
right_annotated: ENSMUSG00000061863.6:Gm6822:processed_pseudogene:307
samples:
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chrom: chr1
strand: -
right_annotated: ENSMUSG00000025978.14:Rftn2:protein_coding:4241
samples:
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chrom: chr1
strand: +
right_annotated: ENSMUSG00000046994.9:Mars2:protein_coding:11294
samples:
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chrom: chr1
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right_annotated: ENSMUSG00000100215.1:Gm8292:processed_pseudogene:396
samples:
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chrom: chr1
strand: -
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samples:
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chrom: chr1
strand: -
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samples:
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chrom: chr1
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right_annotated: ENSMUSG00000102145.1:Gm38056:TEC:5027
samples:
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chrom: chr1
strand: -
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samples:
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chrom: chr1
strand: +
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samples:
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chrom: chr1
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samples:
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chrom: chr1
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samples:
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chrom: chr1
strand: +
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samples:
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chrom: chr1
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samples:
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chrom: chr1
strand: +
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samples:
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chrom: chr1
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samples:
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chrom: chr1
strand: +
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samples:
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chrom: chr1
strand: -
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samples:
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chrom: chr1
strand: +
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samples:
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chrom: chr1
strand: +
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samples:
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chrom: chr1
strand: +
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samples:
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chrom: chr1
strand: +
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samples:
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chrom: chr1
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samples:
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chrom: chr1
strand: +
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samples:
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chrom: chr1
strand: -
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samples:
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chrom: chr1
strand: -
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samples:
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chrom: chr1
strand: +
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samples:
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chrom: chr1
strand: -
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samples:
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chrom: chr1
strand: +
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samples:
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chrom: chr1
strand: -
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samples:
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chrom: chr1
strand: +
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samples:
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chrom: chr1
strand: +
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samples:
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chrom: chr1
strand: -
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samples:
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chrom: chr1
strand: +
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samples:
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chrom: chr1
strand: +
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samples:
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chrom: chr1
strand: +
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samples:
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chrom: chr1
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samples:
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chrom: chr1
strand: -
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samples:
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chrom: chr1
strand: +
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samples:
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chrom: chr1
strand: -
right_annotated: ENSMUSG00000038079.14:Tmem237:protein_coding:2101
samples:
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chrom: chr1
strand: +
right_annotated: ENSMUSG00000097573.2:G730003C15Rik:antisense_RNA:2309
samples:
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chrom: chr1
strand: -
right_annotated: ENSMUSG00000079550.9:Mpp4:protein_coding:3141
samples:
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chrom: chr1
strand: +
right_annotated: ENSMUSG00000101586.1:Gm29017:antisense_RNA:2092
samples:
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chrom: chr1
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samples:
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chrom: chr1
strand: +
right_annotated: ENSMUSG00000026023.16:Cdk15:protein_coding:2108
samples:
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chrom: chr1
strand: +
right_annotated: ENSMUSG00000041075.8:Fzd7:protein_coding:4532
samples:
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chrom: chr1
strand: -
right_annotated: ENSMUSG00000026021.15:Sumo1:protein_coding:1215
samples:
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chrom: chr1
strand: +
right_annotated: ENSMUSG00000026020.9:Nop58:protein_coding:9539
samples:
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chrom: chr1
strand: +
right_annotated: ENSMUSG00000067336.6:Bmpr2:protein_coding:12899
samples:
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chrom: chr1
strand: +
right_annotated: ENSMUSG00000041040.12:Fam117b:protein_coding:5532
samples:
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chrom: chr1
strand: +
right_annotated: ENSMUSG00000103696.1:Gm37531:TEC:5415
samples:
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chrom: chr1
strand: -
right_annotated: ENSMUSG00000026018.12:Ica1l:protein_coding:3770
samples:
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chrom: chr1
strand: -
right_annotated: ENSMUSG00000026019.15:Wdr12:protein_coding:10613
samples:
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chrom: chr1
strand: +
right_annotated: ENSMUSG00000026017.13:Carf:protein_coding:5465
samples:
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chrom: chr1
strand: +
right_annotated: ENSMUSG00000082609.1:Gm15464:processed_pseudogene:431
samples:
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chrom: chr1
strand: +
right_annotated: ENSMUSG00000073664.11:Nbeal1:protein_coding:15731
samples:
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chrom: chr1
strand: +
right_annotated: ENSMUSG00000049439.13:Cyp20a1:protein_coding:2223
samples:
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chrom: chr1
strand: +
right_annotated: ENSMUSG00000026782.15:Abi2:protein_coding:6056
samples:
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chrom: chr1
strand: -
right_annotated: ENSMUSG00000026014.15:Raph1:protein_coding:10449
samples:
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chrom: chr1
strand: -
right_annotated: ENSMUSG00000081562.1:Gm11575:processed_pseudogene:228
samples:
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chrom: chr1
strand: -
right_annotated: ENSMUSG00000082160.1:Gm11578:processed_pseudogene:459
samples:
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chrom: chr1
strand: +
right_annotated: ENSMUSG00000101188.1:Eif4a-ps4:processed_pseudogene:1218
samples:
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chrom: chr1
strand: +
right_annotated: ENSMUSG00000083355.1:Gm11581:processed_pseudogene:763
samples:
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chrom: chr1
strand: +
right_annotated: ENSMUSG00000081382.1:Rpl18-ps1:processed_pseudogene:525
samples:
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chrom: chr1
strand: -
right_annotated: ENSMUSG00000080800.1:Gm11582:processed_pseudogene:236
samples:
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chrom: chr1
strand: +
right_annotated: ENSMUSG00000082804.3:Rpl17-ps1:processed_pseudogene:552
samples:
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chrom: chr1
strand: +
right_annotated: ENSMUSG00000052062.14:Pard3b:protein_coding:8392
samples:
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chrom: chr1
strand: -
right_annotated: ENSMUSG00000100750.1:Gm29084:antisense_RNA:1452
samples:
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chrom: chr1
strand: +
right_annotated: ENSMUSG00000084333.1:Gm11599:processed_pseudogene:878
samples:
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chrom: chr1
strand: +
right_annotated: ENSMUSG00000025969.15:Nrp2:protein_coding:10380
samples:
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chrom: chr1
strand: -
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samples:
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chrom: chr1
strand: +
right_annotated: ENSMUSG00000081429.1:Rps27-ps1:processed_pseudogene:246
samples:
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chrom: chr1
strand: +
right_annotated: ENSMUSG00000084799.7:Ino80dos:lincRNA:2154
samples:
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chrom: chr1
strand: +
right_annotated: ENSMUSG00000101599.1:Gm20342:lincRNA:9720
samples:
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chrom: chr1
strand: -
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samples:
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chrom: chr1
strand: +
right_annotated: ENSMUSG00000025967.16:Eef1b2:protein_coding:1939
samples:
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chrom: chr1
strand: +
right_annotated: ENSMUSG00000098850.1:Gm27390:misc_RNA:176
samples:
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chrom: chr1
strand: +
right_annotated: ENSMUSG00000027520.15:Zdbf2:protein_coding:12629
samples:
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chrom: chr1
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samples:
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chrom: chr1
strand: +
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samples:
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chrom: chr1
strand: +
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samples:
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chrom: chr1
strand: -
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samples:
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chrom: chr1
strand: +
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samples:
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chrom: chr1
strand: +
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samples:
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chrom: chr1
strand: +
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samples:
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chrom: chr1
strand: +
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samples:
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chrom: chr1
strand: -
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samples:
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chrom: chr1
strand: -
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samples:
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chrom: chr1
strand: +
right_annotated: ENSMUSG00000070871.10:Ccnyl1:protein_coding:3426
samples:
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chrom: chr1
strand: -
right_annotated: ENSMUSG00000045005.9:Fzd5:protein_coding:6915
samples:
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chrom: chr1
strand: -
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samples:
,0:28386,1:20187,2:107212,3:63613,4:63582,5:121382,6:170635,7:22369,8:48387,9:42148,11:3035,12:90,13:109879,14:54469,15:33381,16:55926,17:121021,18:40104,19:39721


chrom: chr1
strand: -
right_annotated: ENSMUSG00000084416.3:Rpl10a-ps1:processed_pseudogene:654
samples:
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chrom: chr1
strand: -
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samples:
,0:356256,1:148947,2:13959415,3:7060991,4:927083,5:902555,6:2067,7:1808,8:32670,9:7750,17:913,18:720


chrom: chr1
strand: +
right_annotated: ENSMUSG00000090042.1:Gm8550:processed_pseudogene:653
samples:
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chrom: chr1
strand: +
right_annotated: ENSMUSG00000100774.1:Gm7329:processed_pseudogene:210
samples:
,0:31636,1:19423,2:160319,3:95281,4:36639,5:71315,6:62126,7:13129,8:18393,9:19327,10:14779,11:16629,12:4451,13:821,14:1928,15:945,16:1817,17:927,18:2482,19:1063


chrom: chr1
strand: -
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samples:
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chrom: chr1
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samples:
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chrom: chr1
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samples:
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chrom: chr1
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samples:
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chrom: chr1
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samples:
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chrom: chr1
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samples:
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chrom: chr1
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samples:
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chrom: chr1
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samples:
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chrom: chr1
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samples:
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chrom: chr1
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samples:
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chrom: chr1
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samples:
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chrom: chr1
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right_annotated: ENSMUSG00000055567.18:Unc80:protein_coding:13613
samples:
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chrom: chr1
strand: +
right_annotated: ENSMUSG00000026005.15:Rpe:protein_coding:2724
samples:
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chrom: chr1
strand: -
right_annotated: ENSMUSG00000026004.15:Kansl1l:protein_coding:4570
samples:
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chrom: chr1
strand: -
right_annotated: ENSMUSG00000102559.1:Gm37570:TEC:3106
samples:
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chrom: chr1
strand: +
right_annotated: ENSMUSG00000102776.1:Gm38162:TEC:4597
samples:
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chrom: chr1
strand: -
right_annotated: ENSMUSG00000026003.5:Acadl:protein_coding:1916
samples:
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chrom: chr1
strand: -
right_annotated: ENSMUSG00000082769.3:Gm15793:processed_pseudogene:495
samples:
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chrom: chr1
strand: -
right_annotated: ENSMUSG00000094191.1:Rpl31-ps14:processed_pseudogene:378
samples:
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chrom: chr1
strand: -
right_annotated: ENSMUSG00000026000.16:Lancl1:protein_coding:4461
samples:
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chrom: chr1
strand: +
right_annotated: ENSMUSG00000025991.8:Cps1:protein_coding:5555
samples:
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chrom: chr1
strand: -
right_annotated: ENSMUSG00000062209.15:Erbb4:protein_coding:12085
samples:
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chrom: chr1
strand: -
right_annotated: ENSMUSG00000025997.13:Ikzf2:protein_coding:9548
samples:
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chrom: chr1
strand: +
right_annotated: ENSMUSG00000053153.14:Spag16:protein_coding:4707
samples:
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chrom: chr1
strand: -
right_annotated: ENSMUSG00000101730.1:Gm28580:unprocessed_pseudogene:88
samples:
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chrom: chr1
strand: -
right_annotated: ENSMUSG00000101617.1:Gm6947:processed_pseudogene:78
samples:
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chrom: chr1
strand: +
right_annotated: ENSMUSG00000026192.13:Atic:protein_coding:2845
samples:
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chrom: chr1
strand: -
right_annotated: ENSMUSG00000026193.15:Fn1:protein_coding:8479
samples:
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chrom: chr1
strand: -
right_annotated: ENSMUSG00000101834.1:Gm5829:processed_pseudogene:351
samples:
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chrom: chr1
strand: -
right_annotated: ENSMUSG00000100319.1:Gm5256:processed_pseudogene:877
samples:
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chrom: chr1
strand: +
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samples:
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chrom: chr1
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samples:
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chrom: chr1
strand: -
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samples:
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chrom: chr1
strand: +
right_annotated: ENSMUSG00000097131.1:D230017M19Rik:lincRNA:4595
samples:
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chrom: chr1
strand: -
right_annotated: ENSMUSG00000026189.13:Pecr:protein_coding:1361
samples:
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chrom: chr1
strand: +
right_annotated: ENSMUSG00000026188.11:Tmem169:protein_coding:2928
samples:
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chrom: chr1
strand: +
right_annotated: ENSMUSG00000026187.8:Xrcc5:protein_coding:2555
samples:
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chrom: chr1
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samples:
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chrom: chr1
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samples:
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chrom: chr1
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samples:
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chrom: chr1
strand: +
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samples:
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chrom: chr1
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samples:
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chrom: chr1
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samples:
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chrom: chr1
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samples:
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chrom: chr1
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samples:
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chrom: chr1
strand: +
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samples:
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chrom: chr1
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samples:
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chrom: chr1
strand: +
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samples:
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chrom: chr1
strand: +
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samples:
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chrom: chr1
strand: -
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samples:
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chrom: chr1
strand: +
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samples:
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chrom: chr1
strand: +
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samples:
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chrom: chr1
strand: +
right_annotated: ENSMUSG00000026175.12:Vil1:protein_coding:3124
samples:
,0:1104,1:365,2:38102,3:14044,4:5555,5:9532,6:5497,7:965,8:1665,9:2578,10:535,11:1701,12:293,13:298,14:203,15:3671,16:8236,17:12795,18:663,19:72


chrom: chr1
strand: -
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samples:
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chrom: chr1
strand: -
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samples:
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chrom: chr1
strand: +
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samples:
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chrom: chr1
strand: +
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samples:
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chrom: chr1
strand: -
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samples:
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chrom: chr1
strand: +
right_annotated: ENSMUSG00000026172.12:Bcs1l:protein_coding:2018
samples:
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chrom: chr1
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samples:
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chrom: chr1
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samples:
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chrom: chr1
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samples:
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chrom: chr1
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samples:
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chrom: chr1
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samples:
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chrom: chr1
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samples:
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chrom: chr1
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samples:
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chrom: chr1
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samples:
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chrom: chr1
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samples:
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chrom: chr1
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samples:
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chrom: chr1
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samples:
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chrom: chr1
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samples:
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chrom: chr1
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right_annotated: ENSMUSG00000026199.17:Ankzf1:protein_coding:3016
samples:
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chrom: chr1
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samples:
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chrom: chr1
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right_annotated: ENSMUSG00000026201.12:Stk16:protein_coding:2876
samples:
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chrom: chr1
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samples:
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chrom: chr1
strand: +
right_annotated: ENSMUSG00000026203.16:Dnajb2:protein_coding:3332
samples:
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chrom: chr1
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right_annotated: ENSMUSG00000026204.15:Ptprn:protein_coding:3554
samples:
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chrom: chr1
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right_annotated: ENSMUSG00000026209.15:Dnpep:protein_coding:3445
samples:
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chrom: chr1
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samples:
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chrom: chr1
strand: +
right_annotated: ENSMUSG00000033021.16:Gmppa:protein_coding:1706
samples:
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chrom: chr1
strand: -
right_annotated: ENSMUSG00000032997.16:Chpf:protein_coding:3071
samples:
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chrom: chr1
strand: +
right_annotated: ENSMUSG00000051703.14:Tmem198:protein_coding:2504
samples:
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chrom: chr1
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samples:
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chrom: chr1
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samples:
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chrom: chr1
strand: +
right_annotated: ENSMUSG00000026213.15:Stk11ip:protein_coding:4579
samples:
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chrom: chr1
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samples:
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chrom: chr1
strand: +
right_annotated: ENSMUSG00000082012.1:Gm5257:processed_pseudogene:790
samples:
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chrom: chr1
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samples:
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chrom: chr1
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samples:
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chrom: chr1
strand: -
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samples:
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chrom: chr1
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samples:
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chrom: chr1
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samples:
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chrom: chr1
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samples:
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chrom: chr1
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samples:
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chrom: chr1
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samples:
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chrom: chr1
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samples:
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chrom: chr1
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samples:
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chrom: chr1
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samples:
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chrom: chr1
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samples:
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chrom: chr1
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samples:
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chrom: chr1
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samples:
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chrom: chr1
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samples:
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chrom: chr1
strand: -
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samples:
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chrom: chr1
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samples:
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chrom: chr1
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samples:
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chrom: chr1
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samples:
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chrom: chr1
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samples:
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chrom: chr1
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samples:
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chrom: chr1
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samples:
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chrom: chr1
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samples:
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chrom: chr1
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samples:
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chrom: chr1
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samples:
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chrom: chr1
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samples:
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chrom: chr1
strand: +
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samples:
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chrom: chr1
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samples:
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chrom: chr1
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samples:
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chrom: chr1
strand: +
right_annotated: ENSMUSG00000101450.1:Gm28941:sense_intronic:1017
samples:
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chrom: chr1
strand: +
right_annotated: ENSMUSG00000026159.13:Agfg1:protein_coding:8098
samples:
,0:669167,1:436424,2:485299,3:252531,4:180298,5:325883,6:810442,7:151779,8:210010,9:205804,10:541022,11:163109,12:13521,13:112093,14:51683,15:27789,16:86784,17:91150,18:45089,19:27003


chrom: chr1
strand: -
right_annotated: ENSMUSG00000101784.1:Gm7553:processed_pseudogene:1426
samples:
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chrom: chr1
strand: +
right_annotated: ENSMUSG00000100432.1:Gm7539:processed_pseudogene:630
samples:
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chrom: chr1
strand: +
right_annotated: ENSMUSG00000101173.1:Gm29519:processed_pseudogene:398
samples:
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chrom: chr1
strand: -
right_annotated: ENSMUSG00000101896.1:Gm6244:processed_pseudogene:841
samples:
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chrom: chr1
strand: -
right_annotated: ENSMUSG00000026163.17:Sphkap:protein_coding:8154
samples:
,0:451949,1:303856,2:1783,3:2693,4:26795,5:10252,6:193388,7:52054,8:1582,9:87038,10:93338,14:22357,15:15374,16:93741,17:124283,18:175222,19:143571


chrom: chr1
strand: +
right_annotated: ENSMUSG00000079140.3:Gm6374:processed_pseudogene:788
samples:
,0:10041,1:5202,2:10022,3:4528,4:3282,5:4382,6:352,7:1176,8:1036,9:320,10:1440,11:1812,12:135,14:3923,15:1050,16:3298,17:950,18:2386,19:450


chrom: chr1
strand: -
right_annotated: ENSMUSG00000045658.16:Pid1:protein_coding:6844
samples:
,0:4112,1:1387,2:149482,3:69382,4:79174,5:83792,6:81894,7:28735,8:157481,9:38523,11:34,12:21138,13:89,14:38946,15:14252,16:37269,17:71092,18:29179,19:23694


chrom: chr1
strand: -
right_annotated: ENSMUSG00000036766.12:Dner:protein_coding:3632
samples:
,0:3095,1:2077,2:2243,3:1292,4:2946,5:6194,6:569443,7:57447,8:56461,9:30346,10:40,12:45787,14:79659,15:77965,16:55382,17:70792,18:25665,19:26931


chrom: chr1
strand: -
right_annotated: ENSMUSG00000026219.14:Trip12:protein_coding:9666
samples:
,0:3653281,1:2506590,2:1499262,3:838741,4:1151078,5:2292167,6:1517218,7:342518,8:500163,9:447878,10:554473,11:1953902,12:136137,13:148620,14:115173,15:73473,16:124227,17:218504,18:118411,19:101002


chrom: chr1
strand: -
right_annotated: ENSMUSG00000104503.1:Gm37738:TEC:4716
samples:
,0:300,1:100,2:250,4:996,5:1048,6:8241,7:15965,8:6149,9:14706,10:5626,11:88025,12:1741,13:140,14:50,15:79,16:1148,17:50


chrom: chr1
strand: +
right_annotated: ENSMUSG00000073633.9:Fbxo36:protein_coding:901
samples:
,0:265727,1:181476,2:33850,3:21973,4:24213,5:48890,6:288140,7:80756,8:164985,9:116821,10:81012,11:72518,12:28537,13:32929,14:8815,15:1802,16:600,17:6878,18:2682,19:4614


chrom: chr1
strand: -
right_annotated: ENSMUSG00000026220.6:Slc16a14:protein_coding:3207
samples:
,0:7381,1:4195,2:231,3:100,4:6720,5:16778,6:180,9:32,14:22300,15:5395,16:32934,17:16992,18:9201,19:20958


chrom: chr1
strand: +
right_annotated: ENSMUSG00000064281.7:Rpl19-ps1:processed_pseudogene:591
samples:
,0:81454,1:49219,2:703713,3:478350,4:194671,5:225157,6:352415,7:89898,8:270766,9:226659,10:561121,11:259721,12:59330,13:46939,14:36689,15:23660,16:43158,17:29977,18:47926,19:30705


chrom: chr1
strand: +
right_annotated: ENSMUSG00000098842.1:Gm27907:miRNA:80
samples:
,0:15493,1:8428,2:118219,3:79546,4:33193,5:41944,6:102873,7:25063,8:75757,9:66807,10:165438,11:76764,12:17827,13:15406,14:6184,15:3954,16:6940,17:4873,18:7344,19:4638


chrom: chr1
strand: -
right_annotated: ENSMUSG00000101279.1:Gm18342:unprocessed_pseudogene:694
samples:
,0:100,1:31,2:308,3:307,4:161,5:373,6:485,7:20,8:516,9:239,12:431,13:98,14:592,15:97,16:100,17:100,18:682


chrom: chr1
strand: -
right_annotated: ENSMUSG00000089844.7:A530032D15Rik:protein_coding:1603
samples:
,0:1163,1:220,2:8143,3:6236,4:2395,5:5262,6:11359,7:1266,8:1401,9:109,11:1561,12:472,14:4524,15:868,16:596,17:478,18:4110,19:498


chrom: chr1
strand: +
right_annotated: ENSMUSG00000073631.1:Gm10553:protein_coding:372
samples:
,0:158,1:3,2:4231,3:4735,4:1162,5:2378,6:1488,7:432,8:5530,11:4484,14:327,15:50,16:142,18:300,19:105


chrom: chr1
strand: +
right_annotated: ENSMUSG00000072109.11:A530040E14Rik:antisense_RNA:1515
samples:
,0:930,1:592,2:50874,3:39704,4:15975,5:24698,6:10856,7:3236,8:1245,10:795,11:3723,12:89,14:1704,15:248,16:1220,17:306,18:2126,19:594


chrom: chr1
strand: -
right_annotated: ENSMUSG00000052477.15:C130026I21Rik:protein_coding:2713
samples:
,0:1605,1:836,2:26813,3:18045,4:7815,5:12706,6:9159,7:1542,8:1160,11:2117,12:409,14:2981,15:1312,16:802,17:170,18:4025,19:774


chrom: chr1
strand: +
right_annotated: ENSMUSG00000089716.7:Gm6264:transcribed_unprocessed_pseudogene:1474
samples:
,0:1134,1:413,2:3858,3:2069,4:1463,5:3268,6:10890,7:784,8:1339,9:1067,10:356,11:1355,12:719,14:2393,15:650,16:939,17:604,18:2604,19:470


chrom: chr1
strand: +
right_annotated: ENSMUSG00000079457.9:Gm7609:transcribed_unprocessed_pseudogene:2496
samples:
,0:175,2:3851,3:3569,4:1484,5:1324,6:816,7:35,8:385,9:334,10:211,11:565,12:945,13:1356,14:2962,15:427,16:209,17:250,18:3059,19:166


chrom: chr1
strand: +
right_annotated: ENSMUSG00000089652.1:Gm16025:lincRNA:2425
samples:
,0:200,1:200,2:932,3:481,4:539,5:918,6:354,7:160,8:130,9:82,12:1704,14:4188,15:1723,16:200,17:100,18:108,19:50


chrom: chr1
strand: -
right_annotated: ENSMUSG00000089937.1:Gm7281:unprocessed_pseudogene:543
samples:
,0:56,1:26,2:588,3:335,4:439,5:746,6:2413,7:624,8:293,9:229,10:34,11:44,12:240,13:42,14:251,15:469,16:160,17:248,18:617,19:192


chrom: chr1
strand: +
right_annotated: ENSMUSG00000101751.1:Gm2427:unprocessed_pseudogene:881
samples:
,0:407,1:131,2:1706,3:5700,4:6032,5:10144,6:5643,7:798,8:644,9:1182,11:180,12:4310,13:1701,14:989,15:300,16:500,17:418,18:2252,19:390


chrom: chr1
strand: -
right_annotated: ENSMUSG00000089714.1:Gm16092:lincRNA:2405
samples:
,0:300,1:92,2:1459,3:5211,4:5416,5:9322,6:4721,7:798,8:378,9:933,11:90,12:6534,13:1701,14:894,15:335,16:200,17:100,18:250,19:50


chrom: chr1
strand: -
right_annotated: ENSMUSG00000070034.13:Sp110:protein_coding:1921
samples:
,0:1049,1:537,2:50595,3:28368,4:12704,5:22862,6:1684,7:500,8:82,11:170,14:1013,15:903,16:370,17:69,18:1446,19:139


chrom: chr1
strand: +
right_annotated: ENSMUSG00000070031.11:Sp140:protein_coding:2417
samples:
,0:1665,1:482,2:25810,3:15447,4:9287,5:12828,6:18136,7:2991,8:944,9:817,10:46,11:3600,12:2312,13:90,14:4573,15:1879,16:1353,17:891,18:5171,19:1593


chrom: chr1
strand: -
right_annotated: ENSMUSG00000073628.5:Gm10552:antisense_RNA:1056
samples:
,0:495,1:101,2:13282,3:7454,4:2920,5:5938,6:13173,7:1087,8:249,9:76,11:2661,12:8,14:1114,15:387,16:421,18:1246,19:444


chrom: chr1
strand: -
right_annotated: ENSMUSG00000090246.1:Gm17017:antisense_RNA:2405
samples:
,0:349,1:300,2:4092,3:2890,4:1835,5:3129,6:630,8:60,9:181,12:2516,13:90,14:589,15:250,16:350,17:200,18:350,19:100


chrom: chr1
strand: +
right_annotated: ENSMUSG00000026222.16:Sp100:protein_coding:3801
samples:
,0:3099,1:1070,2:98303,3:52757,4:22045,5:23052,6:17361,7:636,8:84,9:131,11:193,14:343,15:99,17:601,18:159


chrom: chr1
strand: +
right_annotated: ENSMUSG00000036707.16:Cab39:protein_coding:3961
samples:
,0:333938,1:220561,2:900090,3:330332,4:288959,5:499886,6:1443886,7:248123,8:282347,9:345232,10:17964,11:1906258,12:80595,13:131230,14:196467,15:95816,16:210030,17:302656,18:281008,19:215075


chrom: chr1
strand: +
right_annotated: ENSMUSG00000026223.15:Itm2c:protein_coding:2230
samples:
,0:212652,1:136163,2:1152634,3:658325,4:820129,5:1332232,6:1723335,7:253349,8:338981,9:301153,10:163489,11:139654,12:302443,13:86705,14:3365621,15:2254661,16:3468502,17:3491517,18:3823404,19:3063595


chrom: chr1
strand: +
right_annotated: ENSMUSG00000026224.11:4933407L21Rik:protein_coding:1217
samples:
,0:4504,1:3454,2:408,3:103,4:8065,5:19386,6:78072,7:35270,8:78872,9:47043,14:6007,16:6429,17:2938,18:12613,19:8581


chrom: chr1
strand: -
right_annotated: ENSMUSG00000099342.1:Gm18180:processed_pseudogene:1484
samples:
,0:6303,1:4689,2:44049,3:24407,4:12381,5:18690,6:223160,7:49996,8:68052,9:56014,11:182426,12:69906,13:1916,14:32946,15:20734,16:18351,17:27297,18:25074,19:12379


chrom: chr1
strand: +
right_annotated: ENSMUSG00000026227.11:2810459M11Rik:protein_coding:3331
samples:
,0:1736,1:1146,2:6038,3:588,4:848,5:597,6:6452,7:1392,9:16419,14:19458,15:8510,16:13194,17:5174,19:9583


chrom: chr1
strand: +
right_annotated: ENSMUSG00000026229.17:Psmd1:protein_coding:3112
samples:
,0:271580,1:161029,2:678381,3:416687,4:261468,5:422679,6:1406766,7:220704,8:999389,9:743145,10:1998270,11:2077867,12:206772,13:305073,14:595209,15:316143,16:379056,17:695550,18:695539,19:544019


chrom: chr1
strand: +
right_annotated: ENSMUSG00000103272.1:Gm37914:TEC:2679
samples:
,0:450,1:100,2:2987,3:761,4:1598,5:2596,6:19057,7:8378,8:101,9:4841,11:38,12:74,13:79,14:100,15:50,18:100


chrom: chr1
strand: +
right_annotated: ENSMUSG00000094638.1:Gm21972:protein_coding:776
samples:
,0:66597,1:42002,2:93405,3:59243,4:33278,5:54145,6:207051,7:18887,8:60453,9:48567,10:132294,11:97495,12:6816,13:15201,14:19965,15:8513,16:14303,17:13726,18:22937,19:15860


chrom: chr1
strand: +
right_annotated: ENSMUSG00000062590.13:Armc9:protein_coding:5239
samples:
,0:237498,1:168026,2:84199,3:46889,4:35779,5:64722,6:281581,7:34254,8:41446,9:85706,10:408251,11:254674,12:16962,13:77896,14:59551,15:48793,16:82673,17:50572,18:145517,19:67069


chrom: chr1
strand: +
right_annotated: ENSMUSG00000079445.3:B3gnt7:protein_coding:2582
samples:
,0:699,1:400,2:35425,3:34895,4:13300,5:11889,6:134035,7:10211,8:25198,9:40591,10:679,11:53423,12:39828,13:17392,15:94,19:2659


chrom: chr1
strand: +
right_annotated: ENSMUSG00000091806.1:Gm5258:processed_pseudogene:327
samples:
,0:39,2:45,3:40,6:15213,7:6127,8:6701,9:6512,10:6367,11:3401,12:2160,13:1568,14:70,16:23,17:48,18:33,19:289


chrom: chr1
strand: -
right_annotated: ENSMUSG00000026234.12:Ncl:protein_coding:8202
samples:
,0:335385,1:208113,2:2371257,3:1761359,4:736529,5:1143385,6:4093743,7:600774,8:2460830,9:1891806,10:2666849,11:4136523,12:478154,13:301431,14:385876,15:228350,16:493341,17:319056,18:492018,19:458765


chrom: chr1
strand: +
right_annotated: ENSMUSG00000073627.7:C130036L24Rik:processed_transcript:3109
samples:
,0:861,1:458,2:3599,3:2690,4:1733,5:3422,6:1902,7:1482,8:745,9:44,11:30,14:3001,15:6787,16:3721,17:1166,18:1965,19:6613


chrom: chr1
strand: +
right_annotated: ENSMUSG00000026238.14:Ptma:protein_coding:1216
samples:
,0:89514,1:47766,2:1774001,3:1119596,4:417538,5:623399,6:5773101,7:1209795,8:2913114,9:2496759,10:2939085,11:2865109,12:588401,13:599092,14:82086,15:46308,16:96815,17:77367,18:82020,19:53402


chrom: chr1
strand: -
right_annotated: ENSMUSG00000026239.14:Pde6d:protein_coding:1469
samples:
,0:198972,1:136353,2:171013,3:95388,4:57294,5:81432,6:258428,7:50129,8:148716,9:96100,10:292818,11:164796,12:100161,13:10976,14:75600,15:62190,16:91923,17:104285,18:106575,19:79302


chrom: chr1
strand: +
right_annotated: ENSMUSG00000026240.12:Cops7b:protein_coding:5383
samples:
,0:54446,1:39366,2:107121,3:70431,4:41947,5:77068,6:139561,7:25652,8:188737,9:118079,10:48556,11:102128,12:96765,13:88004,14:24931,15:16951,16:25861,17:37267,18:46031,19:32540


chrom: chr1
strand: -
right_annotated: ENSMUSG00000026241.5:Nppc:protein_coding:1042
samples:
,0:350,2:44830,3:32398,4:1387,5:1300,6:27879,7:1409,8:61,9:17629,10:5547,14:47253,15:26041,16:54231,17:55486,18:91727,19:60195


chrom: chr1
strand: +
right_annotated: ENSMUSG00000053333.15:Dis3l2:protein_coding:3154
samples:
,0:128320,1:88779,2:159031,3:114141,4:50542,5:83524,6:140263,7:23223,8:72125,9:40108,10:9004,11:92929,13:79211,14:57737,15:58783,16:73653,17:45699,18:123987,19:110689


chrom: chr1
strand: -
right_annotated: ENSMUSG00000084106.4:Gm6136:processed_pseudogene:891
samples:
,0:152327,1:107403,2:1925442,3:1221362,4:436868,5:509536,6:2364624,7:504588,8:1606518,9:1288534,10:3637788,11:2177632,12:389035,13:299569,14:120168,15:89633,16:146401,17:128228,18:129275,19:119549


chrom: chr1
strand: -
right_annotated: ENSMUSG00000026247.13:Ecel1:protein_coding:3179
samples:
,0:7338,1:3828,2:2970,3:45645,4:1324,5:714,6:76185,7:8370,8:3864,9:30179,11:198779,12:48605,13:5175,17:8599,18:751,19:200


chrom: chr1
strand: +
right_annotated: ENSMUSG00000026253.14:Chrng:protein_coding:2780
samples:
,0:276,2:4191,3:749,4:500,5:999,6:264246,7:29129,8:84779,9:94259,10:128103,11:294199,12:341703,13:195765


chrom: chr1
strand: +
right_annotated: ENSMUSG00000026254.17:Eif4e2:protein_coding:7497
samples:
,0:506953,1:337010,2:356163,3:202882,4:140996,5:249800,6:464263,7:81128,8:403625,9:407845,10:597469,11:488273,12:103916,13:130213,14:37856,15:64770,16:71452,17:80399,18:114698,19:90141


chrom: chr1
strand: +
right_annotated: ENSMUSG00000026255.15:Efhd1:protein_coding:1854
samples:
,0:1043174,1:702006,2:1143934,3:182635,4:610786,5:1138335,6:840164,7:111776,8:281257,9:271553,10:1960141,11:1293966,12:510154,13:51876,18:3713,19:2363


chrom: chr1
strand: -
right_annotated: ENSMUSG00000089821.1:Efhd1os:antisense_RNA:332
samples:
,0:124076,1:85209,2:146841,3:23468,4:80509,5:139028,6:6657,7:808,8:14540,9:14672,10:77470,11:56135,12:44312,13:6263


chrom: chr1
strand: +
right_annotated: ENSMUSG00000048000.15:Gigyf2:protein_coding:5724
samples:
,0:401342,1:250825,2:429241,3:260029,4:278932,5:529385,6:480342,7:44539,8:143473,9:104213,10:177752,11:411421,12:24553,13:82,14:40048,15:94323,16:133445,17:83915,18:82330,19:49710


chrom: chr1
strand: -
right_annotated: ENSMUSG00000026259.14:Ngef:protein_coding:3379
samples:
,0:2958,1:1750,2:26586,3:13512,4:12270,5:12443,7:45,14:1443240,15:1061693,16:1582682,17:1428950,18:1546798,19:1012111


chrom: chr1
strand: +
right_annotated: ENSMUSG00000091123.1:Gm17181:processed_pseudogene:123
samples:
,0:185,1:50,2:431,3:273,4:100,5:98,6:4478,7:883,8:4938,9:2600,10:3760,11:6485,12:519,13:595,14:13283,15:8379,16:20563,17:14663,18:18898,19:12787


chrom: chr1
strand: -
right_annotated: ENSMUSG00000090994.1:Gm6153:processed_pseudogene:1058
samples:
,0:1759,1:955,2:4330,3:2942,4:1337,5:1691,6:2640,7:677,8:1786,9:1906,10:1736,11:4286,12:163,13:318,14:450,15:446,16:248,17:689,18:450,19:124


chrom: chr1
strand: +
right_annotated: ENSMUSG00000026288.14:Inpp5d:protein_coding:4981
samples:
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chrom: chr1
strand: +
right_annotated: ENSMUSG00000026289.15:Atg16l1:protein_coding:3178
samples:
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chrom: chr1
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right_annotated: ENSMUSG00000056055.13:Sag:protein_coding:1729
samples:
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chrom: chr1
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right_annotated: ENSMUSG00000070738.10:Dgkd:protein_coding:5695
samples:
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chrom: chr1
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samples:
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chrom: chr1
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right_annotated: ENSMUSG00000103996.1:4833421G17Rik:TEC:844
samples:
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chrom: chr1
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right_annotated: ENSMUSG00000005501.14:Usp40:protein_coding:5316
samples:
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chrom: chr1
strand: +
right_annotated: ENSMUSG00000084021.1:Gm5832:processed_pseudogene:1582
samples:
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chrom: chr1
strand: +
right_annotated: ENSMUSG00000090124.7:Ugt1a7c:protein_coding:4217
samples:
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chrom: chr1
strand: -
right_annotated: ENSMUSG00000081984.3:Dnajb3:protein_coding:1051
samples:
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chrom: chr1
strand: +
right_annotated: ENSMUSG00000079429.9:Mroh2a:protein_coding:7555
samples:
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chrom: chr1
strand: -
right_annotated: ENSMUSG00000044783.16:Hjurp:protein_coding:4892
samples:
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chrom: chr1
strand: -
right_annotated: ENSMUSG00000049866.12:Arl4c:protein_coding:5490
samples:
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chrom: chr1
strand: +
right_annotated: ENSMUSG00000036206.12:Sh3bp4:protein_coding:4995
samples:
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chrom: chr1
strand: +
right_annotated: ENSMUSG00000102700.1:Gm38312:TEC:1746
samples:
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chrom: chr1
strand: -
right_annotated: ENSMUSG00000102083.1:Gm5259:processed_pseudogene:800
samples:
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chrom: chr1
strand: +
right_annotated: ENSMUSG00000055013.15:Agap1:protein_coding:13355
samples:
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chrom: chr1
strand: -
right_annotated: ENSMUSG00000102009.6:4933400F21Rik:processed_transcript:3322
samples:
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chrom: chr1
strand: -
right_annotated: ENSMUSG00000026301.16:Iqca:protein_coding:3362
samples:
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chrom: chr1
strand: +
right_annotated: ENSMUSG00000044337.5:Ackr3:protein_coding:3065
samples:
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chrom: chr1
strand: +
right_annotated: ENSMUSG00000034432.11:Cops8:protein_coding:2287
samples:
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chrom: chr1
strand: -
right_annotated: ENSMUSG00000048126.16:Col6a3:protein_coding:10852
samples:
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chrom: chr1
strand: +
right_annotated: ENSMUSG00000026303.6:Mlph:protein_coding:4499
samples:
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chrom: chr1
strand: +
right_annotated: ENSMUSG00000026305.15:Lrrfip1:protein_coding:5807
samples:
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chrom: chr1
strand: -
right_annotated: ENSMUSG00000100018.1:Gm7776:processed_pseudogene:720
samples:
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chrom: chr1
strand: +
right_annotated: ENSMUSG00000034353.14:Ramp1:protein_coding:3022
samples:
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chrom: chr1
strand: +
right_annotated: ENSMUSG00000034343.14:Ube2f:protein_coding:6084
samples:
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chrom: chr1
strand: +
right_annotated: ENSMUSG00000083064.1:Gm7785:processed_pseudogene:892
samples:
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chrom: chr1
strand: -
right_annotated: ENSMUSG00000097285.1:Gm26683:lincRNA:470
samples:
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chrom: chr1
strand: +
right_annotated: ENSMUSG00000026307.12:Scly:protein_coding:2202
samples:
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chrom: chr1
strand: -
right_annotated: ENSMUSG00000090322.1:Gm17090:antisense_RNA:490
samples:
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chrom: chr1
strand: +
right_annotated: ENSMUSG00000049515.12:Espnl:protein_coding:5445
samples:
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chrom: chr1
strand: -
right_annotated: ENSMUSG00000026309.14:Ilkap:protein_coding:1378
samples:
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chrom: chr1
strand: -
right_annotated: ENSMUSG00000067071.8:Hes6:protein_coding:1335
samples:
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chrom: chr1
strand: -
right_annotated: ENSMUSG00000055866.9:Per2:protein_coding:5833
samples:
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chrom: chr1
strand: +
right_annotated: ENSMUSG00000034292.13:Traf3ip1:protein_coding:3680
samples:
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chrom: chr1
strand: +
right_annotated: ENSMUSG00000026311.16:Asb1:protein_coding:6432
samples:
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chrom: chr1
strand: -
right_annotated: ENSMUSG00000100980.1:Gm29100:antisense_RNA:4410
samples:
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chrom: chr1
strand: -
right_annotated: ENSMUSG00000026313.16:Hdac4:protein_coding:8100
samples:
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chrom: chr1
strand: +
right_annotated: ENSMUSG00000096941.1:Gm26720:lincRNA:3538
samples:
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chrom: chr1
strand: -
right_annotated: ENSMUSG00000026260.12:Ndufa10:protein_coding:2020
samples:
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chrom: chr1
strand: -
right_annotated: ENSMUSG00000073616.10:Cops9:protein_coding:759
samples:
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chrom: chr1
strand: -
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samples:
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chrom: chr1
strand: +
right_annotated: ENSMUSG00000034220.7:Gpc1:protein_coding:4176
samples:
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chrom: chr1
strand: +
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samples:
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chrom: chr1
strand: -
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samples:
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chrom: chr1
strand: +
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samples:
,0:203899,1:142831,2:270950,3:114823,4:195665,5:422825,6:478877,7:50730,8:90843,9:57963,10:493008,11:116887,12:48758,13:720,14:200,15:15626,16:20376,17:7971,18:13806,19:21590


chrom: chr1
strand: -
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samples:
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chrom: chr1
strand: +
right_annotated: ENSMUSG00000026270.11:Capn10:protein_coding:3374
samples:
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chrom: chr1
strand: -
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samples:
,0:74717,1:54831,2:36388,3:19761,4:278583,5:657691,6:426262,7:57400,8:191142,9:164439,10:367988,11:438343,12:54076,13:97548,14:730817,15:720119,16:1085200,17:930693,18:942508,19:808972


chrom: chr1
strand: +
right_annotated: ENSMUSG00000047793.13:Sned1:protein_coding:9147
samples:
,0:33101,1:27651,2:502820,3:232280,4:92889,5:112710,6:203368,7:24688,8:15703,9:10891,10:3208,11:15417,12:68549,13:55055,16:4812,19:2718


chrom: chr1
strand: -
right_annotated: ENSMUSG00000026273.13:Mterf4:protein_coding:4161
samples:
,0:61658,1:41076,2:257013,3:144358,4:56582,5:81038,6:255970,7:42602,8:164876,9:125111,10:3208,11:76880,12:5514,13:115527,14:39849,15:14337,16:25202,17:35469,18:27037,19:22987


chrom: chr1
strand: +
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samples:
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chrom: chr1
strand: -
right_annotated: ENSMUSG00000100351.1:Gm7867:processed_pseudogene:546
samples:
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chrom: chr1
strand: -
right_annotated: ENSMUSG00000026274.11:Pask:protein_coding:5779
samples:
,0:432883,1:305447,2:72056,3:59034,4:18601,5:33985,6:244792,7:12745,8:163377,9:8564,10:21563,11:528343,13:60479,15:1273,16:1304,17:727,18:6013,19:4870


chrom: chr1
strand: +
right_annotated: ENSMUSG00000026275.13:Ppp1r7:protein_coding:10315
samples:
,0:223164,1:143015,2:209061,3:143261,4:97430,5:168141,6:370281,7:75740,8:207652,9:234182,10:350870,11:177385,12:35636,13:69437,14:191278,15:127689,16:308922,17:230299,18:304114,19:245902


chrom: chr1
strand: -
right_annotated: ENSMUSG00000034088.15:Hdlbp:protein_coding:6338
samples:
,0:2151515,1:1463032,2:3352252,3:2409148,4:1136186,5:1799686,6:1754464,7:254303,8:915161,9:632495,10:647146,11:2547511,12:183812,13:366735,14:139797,15:171834,16:295959,17:213053,18:195211,19:157081


chrom: chr1
strand: +
right_annotated: ENSMUSG00000090489.3:Gm17415:processed_pseudogene:789
samples:
,0:3833,1:3110,2:25435,3:19306,4:5778,5:8505,6:8372,7:1067,8:8170,9:4592,10:7433,11:4955,12:2441,13:428,14:1461,15:971,16:1884,17:932,18:1093,19:1206


chrom: chr1
strand: +
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samples:
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chrom: chr1
strand: +
right_annotated: ENSMUSG00000112508.1:Sept2:protein_coding:3335
samples:
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chrom: chr1
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samples:
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chrom: chr1
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samples:
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chrom: chr1
strand: +
right_annotated: ENSMUSG00000100927.1:Gm28536:antisense_RNA:1317
samples:
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chrom: chr1
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right_annotated: ENSMUSG00000026278.14:Bok:protein_coding:1479
samples:
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chrom: chr1
strand: -
right_annotated: ENSMUSG00000026279.14:Thap4:protein_coding:5628
samples:
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chrom: chr1
strand: +
right_annotated: ENSMUSG00000101952.1:Gm10550:antisense_RNA:982
samples:
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chrom: chr1
strand: +
right_annotated: ENSMUSG00000026280.17:Atg4b:protein_coding:4173
samples:
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chrom: chr1
strand: -
right_annotated: ENSMUSG00000026281.15:Dtymk:protein_coding:2271
samples:
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chrom: chr1
strand: +
right_annotated: ENSMUSG00000026283.13:Ing5:protein_coding:4706
samples:
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chrom: chr1
strand: +
right_annotated: ENSMUSG00000073609.9:D2hgdh:protein_coding:3493
samples:
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chrom: chr1
strand: +
right_annotated: ENSMUSG00000101660.1:Gm18666:unprocessed_pseudogene:958
samples:
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chrom: chr1
strand: +
right_annotated: ENSMUSG00000099624.1:Gm7889:unprocessed_pseudogene:958
samples:
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chrom: chr1
strand: -
right_annotated: ENSMUSG00000100347.1:Gm7895:processed_pseudogene:1173
samples:
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chrom: chr1
strand: -
right_annotated: ENSMUSG00000099592.1:Gm5264:processed_pseudogene:848
samples:
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chrom: chr1
strand: +
right_annotated: ENSMUSG00000051185.9:Fam174a:protein_coding:4814
samples:
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chrom: chr1
strand: +
right_annotated: ENSMUSG00000103973.1:BC055308:TEC:2538
samples:
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chrom: chr1
strand: +
right_annotated: ENSMUSG00000081051.4:Gm15427:processed_pseudogene:531
samples:
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chrom: chr1
strand: -
right_annotated: ENSMUSG00000040710.10:St8sia4:protein_coding:14346
samples:
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chrom: chr1
strand: +
right_annotated: ENSMUSG00000100362.1:Gm1833:processed_pseudogene:682
samples:
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chrom: chr1
strand: -
right_annotated: ENSMUSG00000040693.7:Slco4c1:protein_coding:4908
samples:
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chrom: chr1
strand: -
right_annotated: ENSMUSG00000100454.1:Gm28901:lincRNA:474
samples:
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chrom: chr1
strand: +
right_annotated: ENSMUSG00000044757.7:Gm6430:processed_pseudogene:1248
samples:
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chrom: chr1
strand: -
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samples:
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chrom: chr1
strand: -
right_annotated: ENSMUSG00000040648.14:Ppip5k2:protein_coding:6239
samples:
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chrom: chr1
strand: +
right_annotated: ENSMUSG00000026333.14:Gin1:protein_coding:3406
samples:
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chrom: chr1
strand: -
right_annotated: ENSMUSG00000026335.16:Pam:protein_coding:4106
samples:
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chrom: chr1
strand: -
right_annotated: ENSMUSG00000089782.1:Gm3531:processed_pseudogene:489
samples:
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chrom: chr1
strand: -
right_annotated: ENSMUSG00000089706.7:B230216N24Rik:processed_transcript:1497
samples:
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chrom: chr1
strand: +
right_annotated: ENSMUSG00000099634.1:Gm29462:processed_pseudogene:288
samples:
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chrom: chr1
strand: +
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samples:
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chrom: chr1
strand: +
right_annotated: ENSMUSG00000067028.11:Cntnap5b:protein_coding:4027
samples:
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chrom: chr1
strand: -
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samples:
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chrom: chr1
strand: +
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samples:
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chrom: chr1
strand: -
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samples:
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chrom: chr1
strand: +
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samples:
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chrom: chr1
strand: +
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samples:
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chrom: chr1
strand: -
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samples:
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chrom: chr1
strand: +
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samples:
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chrom: chr1
strand: +
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samples:
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chrom: chr1
strand: -
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samples:
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chrom: chr1
strand: +
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samples:
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chrom: chr1
strand: -
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samples:
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chrom: chr1
strand: +
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samples:
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chrom: chr1
strand: +
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samples:
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chrom: chr1
strand: +
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samples:
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chrom: chr1
strand: +
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samples:
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chrom: chr1
strand: +
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samples:
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chrom: chr1
strand: +
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samples:
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chrom: chr1
strand: +
right_annotated: ENSMUSG00000044340.7:Phlpp1:protein_coding:6226
samples:
,0:850676,1:609527,2:112131,3:71849,4:36803,5:47527,6:973546,7:111800,8:464659,9:159543,10:221982,11:792519,12:137860,13:143387,14:16451,15:9620,16:37016,17:57279,18:65376,19:40491


chrom: chr1
strand: +
right_annotated: ENSMUSG00000099604.1:Gm6651:processed_pseudogene:271
samples:
,0:98,2:1710,3:1743,4:469,5:763,6:3077,7:1018,8:4860,9:3544,10:4824,11:3862,12:946,13:409,14:150,15:35,16:150,17:150,18:200,19:214


chrom: chr1
strand: -
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samples:
,0:2199,1:897,2:48102,3:31279,4:37471,5:47105,6:645406,7:83207,8:295806,9:103136,10:1558172,11:3205500,12:36866,13:49736,14:68735,15:35892,16:31755,17:31627,18:11563,19:13618


chrom: chr1
strand: +
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samples:
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chrom: chr1
strand: -
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samples:
,0:19123,1:15399,2:149749,3:98936,4:58764,5:97038,6:842422,7:154480,8:769082,9:323851,10:1994140,11:6061673,12:147933,13:146505,14:49427,15:69373,16:100042,17:58100,18:75610,19:76155


chrom: chr1
strand: -
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samples:
,0:100178,1:64683,2:666623,3:350624,4:213421,5:373875,6:975343,7:218566,8:501035,9:344270,10:980261,11:1137370,12:235727,13:193546,14:88281,15:47023,16:86137,17:118500,18:80464,19:69749


chrom: chr1
strand: -
right_annotated: ENSMUSG00000083884.1:Gm15388:processed_pseudogene:726
samples:
,0:30,2:98,3:150,4:29,6:8463,7:3146,8:6112,9:4760,10:12311,11:7458,12:1007,13:1053,14:137,15:94,17:418,18:224,19:210


chrom: chr1
strand: +
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samples:
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chrom: chr1
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samples:
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chrom: chr1
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samples:
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chrom: chr1
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right_annotated: ENSMUSG00000026312.17:Cdh7:protein_coding:9696
samples:
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chrom: chr1
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samples:
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chrom: chr1
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samples:
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chrom: chr1
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right_annotated: ENSMUSG00000101875.1:Gm6028:processed_pseudogene:574
samples:
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chrom: chr1
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right_annotated: ENSMUSG00000070695.4:Cntnap5a:protein_coding:10945
samples:
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chrom: chr1
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right_annotated: ENSMUSG00000099870.1:Gm7200:processed_pseudogene:1163
samples:
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chrom: chr1
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right_annotated: ENSMUSG00000026374.14:Tsn:protein_coding:7063
samples:
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chrom: chr1
strand: +
right_annotated: ENSMUSG00000026377.12:Nifk:protein_coding:1889
samples:
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chrom: chr1
strand: +
right_annotated: ENSMUSG00000064302.13:Clasp1:protein_coding:11349
samples:
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chrom: chr1
strand: -
right_annotated: ENSMUSG00000107722.1:2900060B14Rik:antisense_RNA:616
samples:
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chrom: chr1
strand: -
right_annotated: ENSMUSG00000080542.1:Gm22710:snRNA:125
samples:
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chrom: chr1
strand: +
right_annotated: ENSMUSG00000026380.10:Tfcp2l1:protein_coding:9269
samples:
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chrom: chr1
strand: -
right_annotated: ENSMUSG00000100767.1:Gm3508:processed_pseudogene:792
samples:
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chrom: chr1
strand: -
right_annotated: ENSMUSG00000004451.14:Ralb:protein_coding:2289
samples:
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chrom: chr1
strand: -
right_annotated: ENSMUSG00000098447.2:Gm27184:antisense_RNA:607
samples:
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chrom: chr1
strand: +
right_annotated: ENSMUSG00000098923.1:Tmem185b:protein_coding:2824
samples:
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chrom: chr1
strand: -
right_annotated: ENSMUSG00000026383.14:Epb41l5:protein_coding:12049
samples:
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chrom: chr1
strand: -
right_annotated: ENSMUSG00000026384.13:Ptpn4:protein_coding:11120
samples:
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chrom: chr1
strand: +
right_annotated: ENSMUSG00000091876.1:Gm3851:processed_pseudogene:318
samples:
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chrom: chr1
strand: -
right_annotated: ENSMUSG00000036975.5:Tmem177:protein_coding:3341
samples:
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chrom: chr1
strand: -
right_annotated: ENSMUSG00000050777.7:Tmem37:protein_coding:1311
samples:
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chrom: chr1
strand: -
right_annotated: ENSMUSG00000026385.16:Dbi:protein_coding:871
samples:
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chrom: chr1
strand: +
right_annotated: ENSMUSG00000026388.15:3110009E18Rik:protein_coding:1089
samples:
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chrom: chr1
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right_annotated: ENSMUSG00000026389.16:Steap3:protein_coding:5644
samples:
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chrom: chr1
strand: -
right_annotated: ENSMUSG00000003721.14:Insig2:protein_coding:2953
samples:
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chrom: chr1
strand: +
right_annotated: ENSMUSG00000104253.1:Gm37174:TEC:3058
samples:
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chrom: chr1
strand: +
right_annotated: ENSMUSG00000026339.18:Ccdc93:protein_coding:7274
samples:
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chrom: chr1
strand: +
right_annotated: ENSMUSG00000081130.1:Gm8217:processed_pseudogene:465
samples:
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chrom: chr1
strand: -
right_annotated: ENSMUSG00000001674.11:Ddx18:protein_coding:2258
samples:
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chrom: chr1
strand: +
right_annotated: ENSMUSG00000100913.1:Gm8392:processed_pseudogene:835
samples:
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chrom: chr1
strand: +
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samples:
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chrom: chr1
strand: -
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samples:
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chrom: chr1
strand: +
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samples:
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chrom: chr1
strand: -
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samples:
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chrom: chr1
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samples:
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chrom: chr1
strand: +
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samples:
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chrom: chr1
strand: -
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samples:
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chrom: chr1
strand: -
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samples:
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chrom: chr1
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samples:
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chrom: chr1
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samples:
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chrom: chr1
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samples:
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chrom: chr1
strand: +
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samples:
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chrom: chr1
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samples:
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chrom: chr1
strand: +
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samples:
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chrom: chr1
strand: +
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samples:
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chrom: chr1
strand: -
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samples:
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chrom: chr1
strand: +
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samples:
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chrom: chr1
strand: -
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samples:
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chrom: chr1
strand: +
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samples:
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chrom: chr1
strand: +
right_annotated: ENSMUSG00000056211.13:R3hdm1:protein_coding:6742
samples:
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chrom: chr1
strand: +
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samples:
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chrom: chr1
strand: +
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samples:
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chrom: chr1
strand: -
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samples:
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chrom: chr1
strand: -
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samples:
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chrom: chr1
strand: -
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samples:
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chrom: chr1
strand: -
right_annotated: ENSMUSG00000045382.6:Cxcr4:protein_coding:1805
samples:
,0:7525,1:3624,2:29590,3:38145,4:29639,5:60684,6:782196,7:69791,8:507550,9:395833,10:41180,11:28770,12:5541,13:1263,19:8


chrom: chr1
strand: +
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samples:
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chrom: chr1
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samples:
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chrom: chr1
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samples:
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chrom: chr1
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samples:
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chrom: chr1
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samples:
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chrom: chr1
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samples:
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chrom: chr1
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samples:
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chrom: chr1
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samples:
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chrom: chr1
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right_annotated: ENSMUSG00000104515.1:Gm37163:TEC:1690
samples:
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chrom: chr1
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right_annotated: ENSMUSG00000016528.10:Mapkapk2:protein_coding:2854
samples:
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chrom: chr1
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right_annotated: ENSMUSG00000016526.8:Dyrk3:protein_coding:3164
samples:
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chrom: chr1
strand: +
right_annotated: ENSMUSG00000026427.16:Eif2d:protein_coding:4135
samples:
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chrom: chr1
strand: -
right_annotated: ENSMUSG00000026430.16:Rassf5:protein_coding:3926
samples:
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chrom: chr1
strand: -
right_annotated: ENSMUSG00000026425.15:Srgap2:protein_coding:8348
samples:
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chrom: chr1
strand: +
right_annotated: ENSMUSG00000052688.12:Rab7b:protein_coding:4532
samples:
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chrom: chr1
strand: +
right_annotated: ENSMUSG00000042268.10:Slc26a9:protein_coding:4739
samples:
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chrom: chr1
strand: +
right_annotated: ENSMUSG00000013275.9:Slc41a1:protein_coding:4697
samples:
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chrom: chr1
strand: +
right_annotated: ENSMUSG00000026433.13:Rab29:protein_coding:1350
samples:
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chrom: chr1
strand: +
right_annotated: ENSMUSG00000026434.12:Nucks1:protein_coding:6020
samples:
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chrom: chr1
strand: -
right_annotated: ENSMUSG00000103975.1:Gm37676:TEC:507
samples:
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chrom: chr1
strand: +
right_annotated: ENSMUSG00000026436.15:Elk4:protein_coding:4642
samples:
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chrom: chr1
strand: -
right_annotated: ENSMUSG00000059149.17:Mfsd4a:protein_coding:6498
samples:
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chrom: chr1
strand: +
right_annotated: ENSMUSG00000097454.1:Gm26892:lincRNA:1636
samples:
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chrom: chr1
strand: -
right_annotated: ENSMUSG00000026437.11:Cdk18:protein_coding:4355
samples:
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chrom: chr1
strand: +
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samples:
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chrom: chr1
strand: +
right_annotated: ENSMUSG00000009772.15:Nuak2:protein_coding:3131
samples:
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chrom: chr1
strand: -
right_annotated: ENSMUSG00000042066.15:Tmcc2:protein_coding:4017
samples:
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chrom: chr1
strand: +
right_annotated: ENSMUSG00000042046.15:Dstyk:protein_coding:6282
samples:
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chrom: chr1
strand: -
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samples:
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chrom: chr1
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samples:
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chrom: chr1
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samples:
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chrom: chr1
strand: -
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samples:
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chrom: chr1
strand: -
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samples:
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chrom: chr1
strand: +
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samples:
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chrom: chr1
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samples:
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chrom: chr1
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samples:
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chrom: chr1
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samples:
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chrom: chr1
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samples:
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chrom: chr1
strand: +
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samples:
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chrom: chr1
strand: +
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samples:
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chrom: chr1
strand: +
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samples:
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chrom: chr1
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samples:
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chrom: chr1
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samples:
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chrom: chr1
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samples:
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chrom: chr1
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samples:
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chrom: chr1
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samples:
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chrom: chr1
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samples:
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chrom: chr1
strand: -
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samples:
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chrom: chr1
strand: -
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samples:
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chrom: chr1
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samples:
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chrom: chr1
strand: +
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samples:
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chrom: chr1
strand: -
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samples:
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chrom: chr1
strand: -
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samples:
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chrom: chr1
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samples:
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chrom: chr1
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samples:
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chrom: chr1
strand: +
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samples:
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chrom: chr1
strand: +
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samples:
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chrom: chr1
strand: +
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samples:
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chrom: chr1
strand: +
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samples:
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chrom: chr1
strand: +
right_annotated: ENSMUSG00000042207.17:Kdm5b:protein_coding:9197
samples:
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chrom: chr1
strand: +
right_annotated: ENSMUSG00000026452.15:Syt2:protein_coding:7243
samples:
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chrom: chr1
strand: -
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samples:
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chrom: chr1
strand: +
right_annotated: ENSMUSG00000101168.1:Gm28892:antisense_RNA:2721
samples:
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chrom: chr1
strand: +
right_annotated: ENSMUSG00000026429.9:Ube2t:protein_coding:1116
samples:
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chrom: chr1
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samples:
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chrom: chr1
strand: +
right_annotated: ENSMUSG00000026426.10:Arl8a:protein_coding:1713
samples:
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chrom: chr1
strand: +
right_annotated: ENSMUSG00000079139.4:Gm4204:processed_pseudogene:1231
samples:
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chrom: chr1
strand: +
right_annotated: ENSMUSG00000097680.1:Gm26642:antisense_RNA:2782
samples:
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chrom: chr1
strand: -
right_annotated: ENSMUSG00000041926.15:Rnpep:protein_coding:2288
samples:
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chrom: chr1
strand: -
right_annotated: ENSMUSG00000062580.9:Timm17a:protein_coding:7280
samples:
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chrom: chr1
strand: +
right_annotated: ENSMUSG00000048096.7:Lmod1:protein_coding:3948
samples:
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chrom: chr1
strand: -
right_annotated: ENSMUSG00000041889.7:Shisa4:protein_coding:1763
samples:
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chrom: chr1
strand: -
right_annotated: ENSMUSG00000041879.13:Ipo9:protein_coding:6247
samples:
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chrom: chr1
strand: -
right_annotated: ENSMUSG00000009418.15:Nav1:protein_coding:13364
samples:
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chrom: chr1
strand: +
right_annotated: ENSMUSG00000026421.14:Csrp1:protein_coding:1956
samples:
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chrom: chr1
strand: +
right_annotated: ENSMUSG00000041801.5:Phlda3:protein_coding:1435
samples:
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chrom: chr1
strand: +
right_annotated: ENSMUSG00000026414.13:Tnnt2:protein_coding:1263
samples:
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chrom: chr1
strand: +
right_annotated: ENSMUSG00000101482.1:Gm28883:processed_pseudogene:369
samples:
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chrom: chr1
strand: +
right_annotated: ENSMUSG00000026411.17:Tmem9:protein_coding:2258
samples:
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chrom: chr1
strand: +
right_annotated: ENSMUSG00000041642.18:Kif21b:protein_coding:9115
samples:
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chrom: chr1
strand: -
right_annotated: ENSMUSG00000041605.16:5730559C18Rik:protein_coding:2988
samples:
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chrom: chr1
strand: +
right_annotated: ENSMUSG00000097433.1:Gm26781:antisense_RNA:1477
samples:
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chrom: chr1
strand: -
right_annotated: ENSMUSG00000041570.14:Camsap2:protein_coding:7856
samples:
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chrom: chr1
strand: -
right_annotated: ENSMUSG00000097403.2:9230116N13Rik:processed_transcript:2097
samples:
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chrom: chr1
strand: +
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samples:
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chrom: chr1
strand: +
right_annotated: ENSMUSG00000101413.1:Gm29485:processed_pseudogene:282
samples:
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chrom: chr1
strand: +
right_annotated: ENSMUSG00000041483.14:Zfp281:protein_coding:4937
samples:
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chrom: chr1
strand: +
right_annotated: ENSMUSG00000097113.7:Gm19705:lincRNA:1483
samples:
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chrom: chr1
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right_annotated: ENSMUSG00000104360.1:Gm8762:processed_pseudogene:339
samples:
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chrom: chr1
strand: +
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samples:
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chrom: chr1
strand: +
right_annotated: ENSMUSG00000104145.1:D130019J16Rik:TEC:2158
samples:
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chrom: chr1
strand: -
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samples:
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chrom: chr1
strand: +
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samples:
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chrom: chr1
strand: -
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samples:
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chrom: chr1
strand: -
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samples:
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chrom: chr1
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samples:
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chrom: chr1
strand: +
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samples:
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chrom: chr1
strand: -
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samples:
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chrom: chr1
strand: -
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samples:
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chrom: chr1
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samples:
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chrom: chr1
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samples:
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chrom: chr1
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samples:
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chrom: chr1
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samples:
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chrom: chr1
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samples:
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chrom: chr1
strand: +
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samples:
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chrom: chr1
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samples:
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chrom: chr1
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samples:
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chrom: chr1
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samples:
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chrom: chr1
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samples:
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chrom: chr1
strand: +
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samples:
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chrom: chr1
strand: +
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samples:
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chrom: chr1
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samples:
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chrom: chr1
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samples:
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chrom: chr1
strand: +
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samples:
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chrom: chr1
strand: -
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samples:
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chrom: chr1
strand: -
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samples:
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chrom: chr1
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samples:
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chrom: chr1
strand: -
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samples:
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chrom: chr1
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right_annotated: ENSMUSG00000090323.2:Gm5263:processed_pseudogene:601
samples:
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chrom: chr1
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right_annotated: ENSMUSG00000035131.14:Brinp3:protein_coding:4078
samples:
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chrom: chr1
strand: +
right_annotated: ENSMUSG00000080078.2:Gm15583:processed_pseudogene:3510
samples:
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chrom: chr1
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samples:
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chrom: chr1
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samples:
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chrom: chr1
strand: -
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samples:
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chrom: chr1
strand: +
right_annotated: ENSMUSG00000032487.8:Ptgs2:protein_coding:4453
samples:
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chrom: chr1
strand: -
right_annotated: ENSMUSG00000099875.1:Rbm3-ps:processed_pseudogene:465
samples:
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chrom: chr1
strand: -
right_annotated: ENSMUSG00000100690.1:Gm4322:processed_pseudogene:336
samples:
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chrom: chr1
strand: -
right_annotated: ENSMUSG00000006010.14:BC003331:protein_coding:3359
samples:
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chrom: chr1
strand: +
right_annotated: ENSMUSG00000006005.17:Tpr:protein_coding:7656
samples:
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chrom: chr1
strand: -
right_annotated: ENSMUSG00000006014.16:Prg4:protein_coding:4280
samples:
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chrom: chr1
strand: +
right_annotated: ENSMUSG00000101519.1:Ska2l-ps:processed_pseudogene:360
samples:
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chrom: chr1
strand: -
right_annotated: ENSMUSG00000066842.18:Hmcn1:protein_coding:17908
samples:
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chrom: chr1
strand: +
right_annotated: ENSMUSG00000100595.1:Gm19087:processed_pseudogene:946
samples:
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chrom: chr1
strand: -
right_annotated: ENSMUSG00000100954.4:Gm10138:antisense_RNA:366
samples:
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chrom: chr1
strand: +
right_annotated: ENSMUSG00000023150.14:Ivns1abp:protein_coding:5036
samples:
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chrom: chr1
strand: -
right_annotated: ENSMUSG00000052748.14:Swt1:protein_coding:3688
samples:
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chrom: chr1
strand: +
right_annotated: ENSMUSG00000053286.11:Trmt1l:protein_coding:2749
samples:
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chrom: chr1
strand: -
right_annotated: ENSMUSG00000026484.13:Rnf2:protein_coding:3345
samples:
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chrom: chr1
strand: -
right_annotated: ENSMUSG00000100551.1:Gm19503:processed_pseudogene:241
samples:
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chrom: chr1
strand: -
right_annotated: ENSMUSG00000100594.1:2810414N06Rik:lincRNA:1381
samples:
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chrom: chr1
strand: +
right_annotated: ENSMUSG00000043019.12:Edem3:protein_coding:6381
samples:
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chrom: chr1
strand: -
right_annotated: ENSMUSG00000032666.16:1700025G04Rik:protein_coding:9559
samples:
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chrom: chr1
strand: -
right_annotated: ENSMUSG00000014980.14:Tsen15:protein_coding:1133
samples:
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chrom: chr1
strand: +
right_annotated: ENSMUSG00000032649.14:Colgalt2:protein_coding:4093
samples:
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chrom: chr1
strand: -
right_annotated: ENSMUSG00000026482.13:Rgl1:protein_coding:5372
samples:
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chrom: chr1
strand: -
right_annotated: ENSMUSG00000080950.1:Gm7278:processed_pseudogene:1401
samples:
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chrom: chr1
strand: +
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samples:
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chrom: chr1
strand: +
right_annotated: ENSMUSG00000026480.12:Ncf2:protein_coding:3550
samples:
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chrom: chr1
strand: -
right_annotated: ENSMUSG00000042772.15:Smg7:protein_coding:6069
samples:
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chrom: chr1
strand: -
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samples:
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chrom: chr1
strand: +
right_annotated: ENSMUSG00000042751.14:Nmnat2:protein_coding:4626
samples:
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chrom: chr1
strand: -
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samples:
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chrom: chr1
strand: -
right_annotated: ENSMUSG00000026478.14:Lamc1:protein_coding:7622
samples:
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chrom: chr1
strand: +
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samples:
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chrom: chr1
strand: +
right_annotated: ENSMUSG00000042708.12:Shcbp1l:protein_coding:2092
samples:
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chrom: chr1
strand: -
right_annotated: ENSMUSG00000042699.11:Dhx9:protein_coding:4616
samples:
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chrom: chr1
strand: -
right_annotated: ENSMUSG00000042684.8:Npl:protein_coding:1735
samples:
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chrom: chr1
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samples:
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chrom: chr1
strand: +
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samples:
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chrom: chr1
strand: +
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samples:
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chrom: chr1
strand: +
right_annotated: ENSMUSG00000066800.11:Rnasel:protein_coding:4758
samples:
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chrom: chr1
strand: -
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samples:
,0:143823,1:101151,2:1935,3:1155,4:617,5:1597,9:692,14:632,15:5047,16:8156,17:35329,18:1688,19:10221


chrom: chr1
strand: -
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samples:
,0:19294,1:10897,2:20232,3:18766,4:30637,5:37458,6:19667,7:3554,8:23369,9:8550,10:30460,11:4080,12:407,14:38496,15:17654,16:23543,17:31617,18:11461,19:11245


chrom: chr1
strand: +
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samples:
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chrom: chr1
strand: +
right_annotated: ENSMUSG00000026473.15:Glul:protein_coding:2792
samples:
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chrom: chr1
strand: -
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samples:
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chrom: chr1
strand: -
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samples:
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chrom: chr1
strand: -
right_annotated: ENSMUSG00000056708.5:Ier5:protein_coding:3276
samples:
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chrom: chr1
strand: -
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samples:
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chrom: chr1
strand: +
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samples:
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chrom: chr1
strand: +
right_annotated: ENSMUSG00000104181.1:Gm8850:processed_pseudogene:588
samples:
,0:61,1:50,2:1289,3:846,4:881,5:1592,6:6134,7:917,8:509,9:274,10:829,11:410,12:240,14:316,15:712,16:1083,17:237,18:500,19:433


chrom: chr1
strand: -
right_annotated: ENSMUSG00000026469.14:Xpr1:protein_coding:8123
samples:
,0:303863,1:192743,2:302175,3:164127,4:132086,5:252955,6:1282056,7:181210,8:513106,9:274407,10:251759,11:266128,12:5798,13:38192,14:120462,15:62327,16:121226,17:102361,18:197749,19:61037


chrom: chr1
strand: +
right_annotated: ENSMUSG00000033701.13:Acbd6:protein_coding:6044
samples:
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chrom: chr1
strand: -
right_annotated: ENSMUSG00000033684.14:Qsox1:protein_coding:3348
samples:
,0:348516,1:218711,2:433666,3:443326,4:379582,5:656718,6:31252,7:4082,8:33824,9:19581,10:8730,11:24442,12:156533,13:41092,14:35067,15:21318,16:50574,17:21080,18:71236,19:38712


chrom: chr1
strand: +
right_annotated: ENSMUSG00000102299.1:Gm37539:TEC:235
samples:
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chrom: chr1
strand: -
right_annotated: ENSMUSG00000033671.18:Cep350:protein_coding:13307
samples:
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chrom: chr1
strand: -
right_annotated: ENSMUSG00000026466.16:Tor1aip1:protein_coding:4439
samples:
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chrom: chr1
strand: -
right_annotated: ENSMUSG00000102964.1:9430034N14Rik:TEC:3785
samples:
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chrom: chr1
strand: +
right_annotated: ENSMUSG00000050565.16:Tor1aip2:protein_coding:8766
samples:
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chrom: chr1
strand: +
right_annotated: ENSMUSG00000078193.2:Gm2000:protein_coding:445
samples:
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chrom: chr1
strand: -
right_annotated: ENSMUSG00000026600.12:Soat1:protein_coding:8377
samples:
,0:148698,1:95432,2:4511764,3:2082136,4:964404,5:1856133,6:1172887,7:202105,8:388333,9:331854,10:270160,11:335843,12:72,13:633,14:48164,15:38195,16:49807,17:19000,18:15302,19:10766


chrom: chr1
strand: +
right_annotated: ENSMUSG00000101523.1:Gm10031:protein_coding:2653
samples:
,0:49704,1:28999,2:402020,3:208609,4:164536,5:302673,6:457240,7:75683,8:162116,9:128616,10:150348,11:121521,12:22128,13:2477,14:58479,15:37521,16:82333,17:79081,18:76612,19:45561


chrom: chr1
strand: +
right_annotated: ENSMUSG00000026596.13:Abl2:protein_coding:10463
samples:
,0:97364,1:63116,2:314776,3:147116,4:89041,5:179599,6:577690,7:70150,8:51257,9:93682,10:63203,11:217578,12:5407,13:71065,14:42624,15:41619,16:54465,17:50755,18:38910,19:41438


chrom: chr1
strand: -
right_annotated: ENSMUSG00000060519.11:Tor3a:protein_coding:3285
samples:
,0:4769,1:2885,2:84807,3:59906,4:34687,5:36238,6:24714,7:3041,9:1937,11:27677,12:60163,14:866,15:3491,16:5575,17:10250,18:27272,19:13543


chrom: chr1
strand: -
right_annotated: ENSMUSG00000033557.17:Fam20b:protein_coding:4546
samples:
,0:253345,1:158849,2:538924,3:322179,4:183302,5:336998,6:465940,7:77759,8:300463,9:126362,10:167480,11:78244,13:25902,14:75375,15:49505,16:90834,17:66338,18:70647,19:73607


chrom: chr1
strand: +
right_annotated: ENSMUSG00000102961.1:Gm19918:TEC:400
samples:
,0:18345,1:11421,2:38762,3:23787,4:12057,5:22575,6:101537,7:17640,8:50524,9:25234,10:33607,11:18064,13:3228,14:7494,15:5258,16:5834,17:6493,18:5970,19:5357


chrom: chr1
strand: -
right_annotated: ENSMUSG00000026594.14:Ralgps2:protein_coding:9627
samples:
,0:809616,1:555003,2:378852,3:179304,4:69588,5:84201,6:435619,7:109096,8:178998,9:168139,10:149088,11:661745,12:72654,13:61544,14:69960,15:41657,16:61893,17:65779,18:65582,19:33985


chrom: chr1
strand: +
right_annotated: ENSMUSG00000033544.6:Angptl1:protein_coding:2841
samples:
,0:1644,1:626,2:89983,3:27440,4:5127,5:5443,6:94839,7:15253,8:47689,9:5512,10:43,14:292,15:351,16:577,18:916,19:247


chrom: chr1
strand: -
right_annotated: ENSMUSG00000070565.11:Rasal2:protein_coding:10047
samples:
,0:267827,1:180077,2:145412,3:65310,4:58235,5:100101,6:689857,7:104315,8:252776,9:122494,10:2197,11:80925,12:671,13:1412,14:43058,15:35074,16:61565,17:38447,18:38387,19:35584


chrom: chr1
strand: -
right_annotated: ENSMUSG00000103808.1:Gm37060:TEC:2397
samples:
,0:34,1:100,2:37,3:76,4:31,5:77,6:389708,7:71235,8:90393,9:9846,10:127,11:29,13:69,14:46,17:1787,18:197,19:774


chrom: chr1
strand: +
right_annotated: ENSMUSG00000049881.13:2810025M15Rik:transcribed_processed_pseudogene:1194
samples:
,0:298222,1:206378,2:93872,3:81901,4:25428,5:47585,6:343677,7:60111,8:139501,9:114284,10:193378,11:41112,12:8405,13:4836,14:20899,15:4473,16:16306,17:19861,18:13421,19:7666


chrom: chr1
strand: +
right_annotated: ENSMUSG00000033488.11:BC026585:protein_coding:1621
samples:
,0:12540,1:8605,2:188300,3:117062,4:75201,5:95242,6:627086,7:94955,8:327146,9:262982,10:62869,11:505273,12:175862,13:39824,14:8136,17:7861,18:244,19:1100


chrom: chr1
strand: +
right_annotated: ENSMUSG00000103021.1:Gm37682:processed_pseudogene:522
samples:
,2:169,3:227,4:161,5:50,6:88288,7:34259,8:32400,9:28511,10:56427,11:34878,12:6909,13:5996,14:5172,15:4317,16:5032,17:3803,18:6944,19:2834


chrom: chr1
strand: -
right_annotated: ENSMUSG00000004031.13:Brinp2:protein_coding:4167
samples:
,0:100,2:5697,3:5529,4:500,5:880,6:51956,7:4670,8:7107,9:13297,10:35,12:89726,13:4880,14:187474,15:201997,16:386056,17:311323,18:459348,19:310953


chrom: chr1
strand: +
right_annotated: ENSMUSG00000026587.15:Astn1:protein_coding:8390
samples:
,0:1894,1:1605,2:3721,3:1546,4:835,5:1050,6:310842,7:77653,8:23797,9:156648,11:998,12:1150,13:49,14:230007,15:225929,16:421271,17:293179,18:339730,19:270109


chrom: chr1
strand: -
right_annotated: ENSMUSG00000102618.1:Gm37848:TEC:3103
samples:
,2:41,5:82,6:5684,7:2548,8:5077,9:4173,10:2480,11:4761,12:6537,13:8042,15:769,16:596,17:120,18:2449,19:524


chrom: chr1
strand: -
right_annotated: ENSMUSG00000073530.11:Pappa2:protein_coding:9518
samples:
,0:3200,1:1668,2:1741,3:49190,4:1335,5:1985,6:75,7:956,9:2680,10:737218,11:599607,12:90,14:1076,15:3146,16:1420,18:2540,19:831


chrom: chr1
strand: -
right_annotated: ENSMUSG00000061992.2:Gm4953:processed_pseudogene:483
samples:
,0:835,1:246,2:3582,3:2291,4:1312,5:1311,6:1880,7:364,8:1762,9:1472,10:1119,11:828,12:100,13:86,14:4221,15:2609,16:4442,17:4013,18:4926,19:3134


chrom: chr1
strand: +
right_annotated: ENSMUSG00000040782.12:Rfwd2:protein_coding:5116
samples:
,0:97698,1:55228,2:167917,3:70971,4:56665,5:92015,6:240112,7:60865,8:80360,9:64295,10:120348,11:19321,12:23346,13:4809,14:13021,15:10429,16:10429,17:19032,18:12869,19:17653


chrom: chr1
strand: +
right_annotated: ENSMUSG00000015829.13:Tnr:protein_coding:12203
samples:
,0:500,1:225,2:949,3:1111,4:896,5:326,6:4422,7:1922,8:1950,9:707,11:6283,13:430,14:120126,15:70152,16:127407,17:113056,18:92617,19:79253


chrom: chr1
strand: -
right_annotated: ENSMUSG00000026729.9:4930562F07Rik:lincRNA:830
samples:
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chrom: chr1
strand: +
right_annotated: ENSMUSG00000090394.8:4930523C07Rik:protein_coding:300
samples:
,0:18204,1:11464,2:4796,3:3451,4:2281,5:1947,6:33697,7:7760,8:23632,9:11436,10:71395,11:76997,12:38661,13:25752,16:304


chrom: chr1
strand: +
right_annotated: ENSMUSG00000058267.13:Mrps14:protein_coding:3233
samples:
,0:68899,1:43101,2:242317,3:112988,4:61869,5:108792,6:1073394,7:307621,8:785717,9:519897,10:890939,11:267243,12:116330,13:97335,14:152898,15:49067,16:84381,17:84977,18:86480,19:69211


chrom: chr1
strand: -
right_annotated: ENSMUSG00000014226.10:Cacybp:protein_coding:2098
samples:
,0:157580,1:106675,2:510125,3:267410,4:131327,5:212738,6:1484312,7:336654,8:812767,9:663381,10:875471,11:1312887,12:210065,13:173603,14:284244,15:119119,16:256597,17:292022,18:265814,19:212700


chrom: chr1
strand: -
right_annotated: ENSMUSG00000026721.15:Rabgap1l:protein_coding:9115
samples:
,0:174993,1:120577,2:201675,3:117171,4:80199,5:132634,6:1030314,7:231813,8:373061,9:193988,10:2108321,11:4478884,12:203338,13:228013,14:110988,15:96790,16:173137,17:132381,18:206536,19:139961


chrom: chr1
strand: +
right_annotated: ENSMUSG00000104302.1:Gm36975:antisense_RNA:1828
samples:
,0:4233,1:2879,2:4108,3:1548,4:1894,5:2290,6:12659,7:2703,8:7773,9:235,10:4888,11:14995,12:368,13:2301,14:3063,15:3158,16:2592,17:2101,18:2299,19:1489


chrom: chr1
strand: +
right_annotated: ENSMUSG00000057499.3:Gm6177:processed_pseudogene:465
samples:
,0:250,1:443,2:4099,3:1949,4:715,5:863,6:22929,7:5981,8:16957,9:14823,10:17889,11:6718,12:2326,13:1266,14:300,15:278,16:291,17:250,18:150,19:207


chrom: chr1
strand: +
right_annotated: ENSMUSG00000040423.10:Rc3h1:protein_coding:11006
samples:
,0:288563,1:192888,2:366462,3:184803,4:172229,5:345967,6:2184179,7:274297,8:567471,9:485403,10:206102,11:2740727,12:27650,13:49571,14:14662,15:49751,16:43764,17:55802,18:50717,19:30560


chrom: chr1
strand: +
right_annotated: ENSMUSG00000026715.12:Serpinc1:protein_coding:5045
samples:
,0:9894,1:7233,2:80203,3:39547,4:21440,5:49099,6:81875,7:13096,8:33627,9:8238,10:26813,11:102728,12:7722,13:871,15:410,16:828,17:2278,18:5861,19:3043


chrom: chr1
strand: -
right_annotated: ENSMUSG00000043467.19:Zbtb37:protein_coding:18814
samples:
,0:55100,1:36232,2:217361,3:111864,4:93364,5:197492,6:340757,7:53584,8:41899,9:88732,10:26930,11:33883,12:7894,13:2535,14:143,15:8290,16:11351,17:2278,18:12670,19:13262


chrom: chr1
strand: +
right_annotated: ENSMUSG00000053332.13:Gas5:processed_transcript:851
samples:
,0:68186,1:35372,2:722073,3:257538,4:94025,5:95906,6:5322903,7:1541296,8:2884336,9:2170764,10:5938972,11:3652518,12:394870,13:397916,14:31965,15:28231,16:56465,17:31797,18:96081,19:63507


chrom: chr1
strand: +
right_annotated: ENSMUSG00000064440.1:Gm26224:snoRNA:80
samples:
,0:392,1:18,2:4613,3:3096,4:942,5:1788,6:1571,7:387,8:44,9:365,11:11428,12:2833,13:6693,16:174,17:952,18:117,19:60


chrom: chr1
strand: +
right_annotated: ENSMUSG00000080463.1:Gm22489:snoRNA:62
samples:
,0:223,1:145,2:4276,3:3824,4:884,5:2280,6:5303,7:346,8:4036,9:1030,10:4846,11:38786,12:3057,13:6892,15:63,16:227,17:498,18:113,19:51


chrom: chr1
strand: +
right_annotated: ENSMUSG00000064816.1:Gm22357:snoRNA:83
samples:
,0:1349,1:659,2:29133,3:7526,4:3024,5:3771,6:47498,7:9155,8:37664,9:9708,10:188090,11:225061,12:14663,13:26965,15:415,16:853,17:1016,18:1011,19:1085


chrom: chr1
strand: +
right_annotated: ENSMUSG00000084667.1:Gm23212:snoRNA:60
samples:
,0:252,1:283,2:10700,3:5133,4:1786,5:2583,6:34493,7:8592,8:19658,9:6872,10:96444,11:128313,12:9671,13:13102,14:500,15:180,16:467,17:608,18:525,19:410


chrom: chr1
strand: +
right_annotated: ENSMUSG00000077220.1:Snord78:snoRNA:66
samples:
,0:1224,1:359,2:24580,3:8506,4:3254,5:5688,6:61843,7:15972,8:40421,9:25094,10:160700,11:262414,12:9454,13:19425,16:741,17:682,18:488,19:488


chrom: chr1
strand: +
right_annotated: ENSMUSG00000065160.1:Mir5117:snoRNA:84
samples:
,0:416,1:210,2:7212,3:2752,4:1194,5:1849,6:27065,7:8866,8:8948,9:6329,10:15713,11:19524,12:1931,13:5021,15:85,16:773,17:180,18:522,19:249


chrom: chr1
strand: +
right_annotated: ENSMUSG00000065735.1:Snord80:snoRNA:81
samples:
,0:91,1:78,2:5596,3:3740,4:641,5:1405,6:14406,7:3787,8:1040,9:3731,10:15119,11:35368,12:542,13:6239,16:183,17:602,18:731,19:150


chrom: chr1
strand: +
right_annotated: ENSMUSG00000105780.1:Snord80:snoRNA:77
samples:
,0:89,1:75,2:5267,3:3584,4:598,5:1340,6:13750,7:3600,8:998,9:3519,10:14365,11:33562,12:527,13:5965,16:177,17:588,18:700,19:142


chrom: chr1
strand: +
right_annotated: ENSMUSG00000064968.1:Snord47:snoRNA:77
samples:
,0:357,1:135,2:6812,3:4091,4:1085,5:2435,6:18663,7:8125,8:2436,9:4956,11:59640,12:2246,13:7246,15:78,16:815,17:622,19:131


chrom: chr1
strand: +
right_annotated: ENSMUSG00000065228.1:Gm25789:snoRNA:76
samples:
,0:329,1:214,2:9205,3:4191,4:1521,5:2533,6:33947,7:5083,8:5970,9:3903,10:2676,11:27776,12:282,13:7408,16:388,17:657,18:198,19:74


chrom: chr1
strand: -
right_annotated: ENSMUSG00000026709.10:Dars2:protein_coding:3619
samples:
,0:31534,1:18743,2:163263,3:130614,4:51389,5:99000,6:457141,7:17275,8:132406,9:36991,11:432,12:24011,14:82515,15:34024,16:101496,17:60922,18:103507,19:85203


chrom: chr1
strand: +
right_annotated: ENSMUSG00000026708.16:Cenpl:protein_coding:4969
samples:
,0:60268,1:37083,2:58824,3:53051,4:14276,5:24394,6:90005,7:15524,8:440,9:44277,10:74367,11:799,13:142096,18:2595


chrom: chr1
strand: -
right_annotated: ENSMUSG00000026705.16:Klhl20:protein_coding:4072
samples:
,0:48007,1:28188,2:153153,3:79267,4:79973,5:151376,6:95478,7:30337,8:46710,9:21675,10:46281,11:272793,12:10606,14:9956,15:6218,16:14588,17:32900,18:32013,19:9997


chrom: chr1
strand: +
right_annotated: ENSMUSG00000044835.15:Ankrd45:protein_coding:3714
samples:
,0:199336,1:131476,2:2298,3:3200,4:7833,5:9550,6:225277,7:28875,8:306311,9:10279,11:158832,12:678,14:247051,15:101122,16:223137,17:177336,18:200917,19:182118


chrom: chr1
strand: -
right_annotated: ENSMUSG00000049160.15:Tex50:antisense_RNA:1192
samples:
,0:233475,1:162204,2:349,3:444,4:476,5:1220,6:5015,7:2707,8:8389,9:440,10:1970,11:30,14:391,16:561,18:169,19:164


chrom: chr1
strand: -
right_annotated: ENSMUSG00000026701.15:Prdx6:protein_coding:2498
samples:
,0:319318,1:216873,2:1022395,3:493011,4:626460,5:1298136,6:3332516,7:378223,8:3163028,9:2262766,10:5076850,11:4223479,12:395346,13:431279,14:64072,15:35897,16:54879,17:58842,18:51273,19:57366


chrom: chr1
strand: -
right_annotated: ENSMUSG00000040323.13:Gm15429:processed_pseudogene:798
samples:
,0:25662,1:13157,2:177529,3:116832,4:96657,5:162608,6:38951,7:840,8:3919,9:5318,11:21658,12:48146,14:14946,15:10426,16:23163,17:18022,18:18529,19:7768


chrom: chr1
strand: -
right_annotated: ENSMUSG00000040297.12:Suco:protein_coding:6327
samples:
,0:937916,1:614494,2:398339,3:211224,4:427646,5:875826,6:1069544,7:229567,8:342673,9:314401,10:606290,11:773318,12:41790,13:103760,14:2396,15:13407,16:53934,17:16487,18:59596,19:40206


chrom: chr1
strand: +
right_annotated: ENSMUSG00000102254.1:Gm7496:processed_pseudogene:1034
samples:
,0:1245,1:541,2:1467,3:943,4:2517,5:5845,6:16973,7:4146,8:6455,9:17753,10:43100,11:20155,12:1074,13:1256,16:2751,18:1269


chrom: chr1
strand: +
right_annotated: ENSMUSG00000026698.8:Pigc:protein_coding:4250
samples:
,0:119505,1:75448,2:151058,3:77798,4:73495,5:118577,6:260737,7:81393,8:381601,9:163351,10:107962,11:291555,12:564,13:22947,14:49067,15:13908,16:20504,17:33526,18:19549,19:23646


chrom: chr1
strand: +
right_annotated: ENSMUSG00000103393.1:Gm38304:antisense_RNA:600
samples:
,0:1777,1:868,2:2611,3:1352,4:817,5:1521,6:3330,7:1108,8:11431,9:5272,10:2669,11:3644,14:1110,15:424,16:733,18:643,19:232


chrom: chr1
strand: -
right_annotated: ENSMUSG00000040265.16:Dnm3:protein_coding:8031
samples:
,0:76421,1:54056,2:26142,3:17789,4:26512,5:57406,6:63644,7:10691,8:6571,9:8277,11:41845,12:866,13:709,14:258312,15:168888,16:247150,17:179545,18:222043,19:220813


chrom: chr1
strand: +
right_annotated: ENSMUSG00000078190.6:Dnm3os:antisense_RNA:7928
samples:
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chrom: chr1
strand: +
right_annotated: ENSMUSG00000066752.4:Gm10176:TEC:2264
samples:
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chrom: chr1
strand: -
right_annotated: ENSMUSG00000026694.19:Mettl13:protein_coding:4541
samples:
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chrom: chr1
strand: +
right_annotated: ENSMUSG00000026696.15:Vamp4:protein_coding:3963
samples:
,0:177894,1:109630,2:266441,3:148339,4:80507,5:119183,6:463252,7:159043,8:262657,9:297738,10:409577,11:48498,12:45603,13:45757,14:179388,15:75997,16:185611,17:123930,18:150823,19:85632


chrom: chr1
strand: -
right_annotated: ENSMUSG00000040225.15:Prrc2c:protein_coding:11557
samples:
,0:295434,1:200104,2:1040286,3:630959,4:742553,5:1688680,6:3844111,7:596127,8:1497681,9:957115,10:1546124,11:1740440,12:152509,13:216754,14:144944,15:154276,16:231175,17:188526,18:183719,19:142436


chrom: chr1
strand: -
right_annotated: ENSMUSG00000040181.14:Fmo1:protein_coding:3404
samples:
,0:4427,1:2645,2:46752,3:59246,4:49377,5:43055,6:269148,7:16646,8:62219,9:94490,10:2529,11:711,12:399,14:150,15:121,16:461,17:100,18:1184,19:99


chrom: chr1
strand: -
right_annotated: ENSMUSG00000026586.16:Prrx1:protein_coding:9847
samples:
,0:4079,1:2895,2:50250,3:66780,4:31583,5:30129,6:69101,7:384,9:31,10:363,11:167,12:33,14:1682,15:2242,18:7082,19:1750


chrom: chr1
strand: -
right_annotated: ENSMUSG00000040124.5:Gorab:protein_coding:2538
samples:
,0:21725,1:10762,2:83480,3:51153,4:32274,5:58900,6:173674,7:33845,8:172881,9:70026,10:211379,11:241346,12:2592,14:35537,15:29785,16:24786,17:38636,18:48139,19:30335


chrom: chr1
strand: +
right_annotated: ENSMUSG00000102117.1:Rpsa-ps1:processed_pseudogene:886
samples:
,0:13782,1:8971,2:172093,3:125806,4:46058,5:48712,6:328683,7:69243,8:187737,9:153918,10:631973,11:308781,12:59217,13:44743,14:4065,15:6720,16:9522,17:5784,18:6609,19:5118


chrom: chr1
strand: +
right_annotated: ENSMUSG00000026585.13:Kifap3:protein_coding:4012
samples:
,0:1199174,1:758315,2:211327,3:119556,4:81647,5:120904,6:1489633,7:266692,8:529054,9:589874,10:704864,11:1294351,12:51698,13:123444,14:650201,15:515660,16:717648,17:588623,18:581173,19:402732


chrom: chr1
strand: +
right_annotated: ENSMUSG00000026584.14:Scyl3:protein_coding:4603
samples:
,0:111878,1:82489,2:170164,3:96430,4:78433,5:156776,6:182188,7:49808,8:28000,9:49345,10:152636,11:170972,12:21733,13:2340,14:54191,15:38052,16:37120,17:32036,18:55285,19:48101


chrom: chr1
strand: -
right_annotated: ENSMUSG00000041406.14:BC055324:protein_coding:3612
samples:
,0:71588,1:43784,2:141277,3:100551,4:56575,5:118422,6:126001,7:24347,8:22727,9:27340,10:25679,11:47947,12:2979,14:8871,15:5374,16:7444,17:3750,18:9054,19:8828


chrom: chr1
strand: +
right_annotated: ENSMUSG00000041396.13:Mettl18:protein_coding:1513
samples:
,0:9846,1:7080,2:35515,3:18157,4:11964,5:17924,7:9041,8:10603,9:72,13:27098,15:3573,16:13501,17:12128,18:8676,19:6080


chrom: chr1
strand: +
right_annotated: ENSMUSG00000040918.12:Slc19a2:protein_coding:3571
samples:
,0:79722,1:57762,2:141893,3:74156,4:110101,5:270838,6:110650,7:19943,8:15386,9:43230,11:1757,12:24237,13:9212,14:61829,15:27970,16:80731,17:55028,18:56499,19:41899


chrom: chr1
strand: +
right_annotated: ENSMUSG00000026578.6:Ccdc181:protein_coding:1909
samples:
,0:1235485,1:805534,2:79206,3:41978,4:33227,5:58706,6:625845,7:101071,8:385754,9:276612,10:734216,11:469881,12:43609,13:48530,14:39471,15:24732,16:70928,17:31911,18:13473,19:29913


chrom: chr1
strand: -
right_annotated: ENSMUSG00000026577.13:Blzf1:protein_coding:4040
samples:
,0:132475,1:80647,2:148347,3:65127,4:53905,5:103312,6:470783,7:127878,8:351433,9:330712,10:363089,11:1214006,12:13752,13:209740,14:54965,15:37883,16:53871,17:78743,18:94957,19:57691


chrom: chr1
strand: +
right_annotated: ENSMUSG00000026575.15:Nme7:protein_coding:1763
samples:
,0:267320,1:184670,2:132933,3:98543,4:77789,5:147085,6:1060388,7:187199,8:329696,9:341355,10:1182278,11:1333275,12:79486,13:35915,14:178377,15:97400,16:239299,17:126843,18:245927,19:144447


chrom: chr1
strand: -
right_annotated: ENSMUSG00000026576.12:Atp1b1:protein_coding:2580
samples:
,0:122247,1:77284,2:311500,3:280963,4:421727,5:885006,6:2245336,7:516495,8:754316,9:709149,10:948103,11:1798458,12:60172,13:21200,14:4706755,15:2433080,16:4918499,17:4565961,18:4961456,19:3131513


chrom: chr1
strand: +
right_annotated: ENSMUSG00000104011.1:Gm32391:lincRNA:540
samples:
,0:5595,1:2626,2:1992,3:2271,4:2232,5:6088,6:20260,7:6992,8:23167,9:10606,10:65905,11:42587,12:1428,13:8690,14:8792,15:1280,16:1839,17:5818,18:3056,19:4170


chrom: chr1
strand: +
right_annotated: ENSMUSG00000102389.1:D630023O14Rik:TEC:3099
samples:
,0:50,3:245,5:200,6:4982,7:2519,8:3973,9:3051,10:10938,11:4600,12:7473,13:10846,14:158,15:40,16:138,17:40,18:2974


chrom: chr1
strand: -
right_annotated: ENSMUSG00000089967.1:Gm16550:processed_pseudogene:126
samples:
,0:6731,1:4281,2:6288,3:5248,4:1166,5:1921,6:5666,7:989,8:5304,9:3735,10:6518,11:3036,12:980,13:450,14:4047,15:1537,16:1940,17:2676,18:2279,19:2300


chrom: chr1
strand: -
right_annotated: ENSMUSG00000040848.11:Sft2d2:protein_coding:5535
samples:
,0:76472,1:42819,2:732383,3:278044,4:461009,5:971564,6:776483,7:182498,8:315447,9:230029,10:100053,11:605882,12:133169,13:204585,14:84,15:55,19:1468


chrom: chr1
strand: -
right_annotated: ENSMUSG00000040843.10:Tiprl:protein_coding:4380
samples:
,0:259293,1:159873,2:271560,3:133557,4:85335,5:138931,6:1006755,7:160955,8:415734,9:393764,10:622819,11:1515869,12:123578,13:113357,14:137600,15:70241,16:125322,17:159732,18:163807,19:140176


chrom: chr1
strand: -
right_annotated: ENSMUSG00000102302.1:Gm38190:sense_intronic:4755
samples:
,0:3302,1:1565,2:13758,3:7750,4:6807,5:14622,6:42814,7:19158,8:35274,9:928,10:184,11:129696,12:140,13:263,14:6470,15:596,16:1896,17:2907,18:127,19:669


chrom: chr1
strand: +
right_annotated: ENSMUSG00000040836.15:Gpr161:protein_coding:6962
samples:
,0:3915,1:2830,2:66972,3:36604,4:13845,5:19582,6:100381,7:12829,8:25427,9:54680,12:4060,15:5283,16:4787,17:1298


chrom: chr1
strand: -
right_annotated: ENSMUSG00000026571.12:Dcaf6:protein_coding:4110
samples:
,0:990822,1:644311,2:210560,3:106018,4:133312,5:263430,6:326648,7:47280,8:98015,9:73976,10:2654,11:255673,12:9436,13:4017,14:37155,15:17150,16:53649,17:37546,18:40569,19:34600


chrom: chr1
strand: +
right_annotated: ENSMUSG00000026568.6:Mpc2:protein_coding:1025
samples:
,0:660833,1:425563,2:276614,3:80569,4:51021,5:77801,6:541369,7:97774,8:336282,9:266292,10:338842,11:332581,12:70369,13:42527,14:180624,15:106866,16:186312,17:208753,18:193755,19:118208


chrom: chr1
strand: +
right_annotated: ENSMUSG00000026567.16:Adcy10:protein_coding:5436
samples:
,0:1542672,1:987673,2:3864,3:1673,4:2106,5:2698,6:4516,7:5266,8:4,9:952,11:18281,12:11,15:97,16:52,17:159,18:1054,19:1640


chrom: chr1
strand: -
right_annotated: ENSMUSG00000026566.15:Mpzl1:protein_coding:2356
samples:
,0:113688,1:60529,2:366718,3:212628,4:233024,5:455937,6:2656453,7:372447,8:1188663,9:776771,10:531228,11:410859,12:391408,13:44491,15:12958,16:32722,17:20732,18:28535,19:14434


chrom: chr1
strand: -
right_annotated: ENSMUSG00000040723.14:Rcsd1:protein_coding:5091
samples:
,0:5321,1:3515,2:102668,3:73749,4:58136,5:55830,6:21751,7:2689,8:12520,9:54,10:56,11:30111,15:6528,16:963,18:5673,19:291


chrom: chr1
strand: +
right_annotated: ENSMUSG00000040713.12:Creg1:protein_coding:2208
samples:
,0:166003,1:103978,2:427110,3:237596,4:219245,5:379834,6:164140,7:30839,8:115324,9:128268,10:73764,11:287619,12:81378,13:128,14:19131,15:23774,16:57820,17:41338,18:98571,19:101966


chrom: chr1
strand: +
right_annotated: ENSMUSG00000005763.15:Cd247:protein_coding:4558
samples:
,0:25226,1:15219,2:48780,3:30864,4:21586,5:37282,6:16674,7:6677,8:25732,9:172,11:3010,12:5671,15:1177,16:1986,18:900,19:1497


chrom: chr1
strand: -
right_annotated: ENSMUSG00000026565.18:Pou2f1:protein_coding:13268
samples:
,0:97419,1:64331,2:160861,3:111307,4:80015,5:128316,6:402848,7:53272,8:77780,9:59456,10:147645,11:80736,12:29790,13:143,14:392,15:9673,16:16213,17:2683,18:13988,19:13959


chrom: chr1
strand: +
right_annotated: ENSMUSG00000040612.13:Ildr2:protein_coding:8251
samples:
,0:6976,1:1895,2:288053,3:343271,4:691666,5:929332,6:19391,7:1696,14:93895,15:54095,16:115363,17:138568,18:49785,19:56460


chrom: chr1
strand: -
right_annotated: ENSMUSG00000103400.1:Gm15853:lincRNA:2041
samples:
,0:6857,1:4442,2:7597,3:3776,4:1838,5:3730,6:10437,7:2562,8:16914,9:12925,10:29581,11:14256,12:6879,13:1611,14:3394,15:2369,16:4059,17:5000,18:4731,19:2414


chrom: chr1
strand: +
right_annotated: ENSMUSG00000026563.13:Tada1:protein_coding:2215
samples:
,0:81501,1:58255,2:182838,3:92302,4:53946,5:81442,6:641422,7:104076,8:380650,9:252831,10:599342,11:723112,12:107607,13:62223,14:97432,15:50575,16:73401,17:111861,18:98824,19:71223


chrom: chr1
strand: -
right_annotated: ENSMUSG00000040596.15:Pogk:protein_coding:9586
samples:
,0:135873,1:97148,2:502291,3:187059,4:108967,5:170800,6:1364836,7:228575,8:628218,9:334327,10:623746,11:1092609,12:258941,13:104395,14:85865,15:61193,16:89959,17:107522,18:69249,19:63448


chrom: chr1
strand: -
right_annotated: ENSMUSG00000084093.1:Gm16418:processed_pseudogene:171
samples:
,0:12370,1:7382,2:57261,3:44202,4:19517,5:25856,6:217890,7:54648,8:164139,9:108759,10:304192,11:120952,12:47274,13:33045,14:31061,15:16440,16:37581,17:32766,18:44200,19:22722


chrom: chr1
strand: -
right_annotated: ENSMUSG00000086925.1:Gm6286:processed_pseudogene:762
samples:
,0:9805,1:5177,2:65162,3:47488,4:17073,5:19583,6:260917,7:40046,8:98583,9:79539,10:146286,11:91359,12:40321,13:13637,14:4362,15:3374,16:6923,17:4623,18:5683,19:5831


chrom: chr1
strand: -
right_annotated: ENSMUSG00000102548.1:Gm16701:lincRNA:934
samples:
,0:230,1:132,2:388,3:140,4:536,5:1103,6:9624,7:4041,9:17192,14:8016,15:367,16:2139,17:343,18:2121,19:601


chrom: chr1
strand: -
right_annotated: ENSMUSG00000097823.2:Gm16701:lincRNA:1627
samples:
,0:1732,1:333,2:4774,3:2425,4:5229,5:7033,6:12871,7:6415,8:258,9:7044,10:17248,14:1228,15:6273,16:4694,17:7377,18:5553,19:4026


chrom: chr1
strand: +
right_annotated: ENSMUSG00000060568.14:Fam78b:protein_coding:6325
samples:
,0:685,1:699,2:11023,3:7773,4:24542,5:36424,6:148803,7:26289,8:46896,9:20294,10:58159,11:58,14:17907,15:15330,16:22102,17:12654,18:17606,19:9428


chrom: chr1
strand: +
right_annotated: ENSMUSG00000102870.1:Gm17868:unprocessed_pseudogene:668
samples:
,0:150,1:50,2:675,3:503,4:99,5:658,8:358,9:303,12:199,14:4674,15:1654,16:4216,17:3856,18:3982,19:3191


chrom: chr1
strand: -
right_annotated: ENSMUSG00000026558.13:Uck2:protein_coding:4731
samples:
,0:269600,1:176585,2:368619,3:227128,4:72055,5:78745,6:47177,7:10018,8:32920,9:62202,10:59023,11:64958,12:20824,14:35726,15:24570,16:59388,17:20920,18:32667,19:31732


chrom: chr1
strand: +
right_annotated: ENSMUSG00000052428.10:Tmco1:protein_coding:1573
samples:
,0:102801,1:58461,2:531610,3:222318,4:183685,5:252297,6:1074144,7:218388,8:503385,9:408097,10:560534,11:570479,12:33941,13:50157,14:151881,15:47602,16:110781,17:92117,18:110108,19:58187


chrom: chr1
strand: -
right_annotated: ENSMUSG00000088246.1:Gm25911:miRNA:56
samples:
,0:282,1:161,2:211,3:113,4:69,5:241,6:240,7:127,8:22,9:101,10:119,11:213,14:166,15:461,16:513,17:284,18:108,19:167


chrom: chr1
strand: +
right_annotated: ENSMUSG00000026687.14:Aldh9a1:protein_coding:2835
samples:
,0:168332,1:117017,2:431591,3:244936,4:255570,5:385773,6:451601,7:63473,8:230849,9:88401,10:444181,11:408038,12:330648,13:479401,14:5280,15:5494,16:18267,17:9766,18:8287,19:6454


chrom: chr1
strand: -
right_annotated: ENSMUSG00000026688.5:Mgst3:protein_coding:1097
samples:
,0:18935,1:10327,2:125330,3:89309,4:35551,5:58897,6:3736175,7:768473,8:2710978,9:1956056,10:5573828,11:2965258,12:964601,13:673321,14:219946,15:120335,16:256502,17:233414,18:393859,19:242740


chrom: chr1
strand: +
right_annotated: ENSMUSG00000015843.10:Rxrg:protein_coding:2297
samples:
,0:2284,1:2180,2:499,3:100,4:289,5:100,6:609,7:621,8:38,9:49531,10:255068,11:339748,13:39462,14:17833,16:276


chrom: chr1
strand: +
right_annotated: ENSMUSG00000026686.14:Lmx1a:protein_coding:3396
samples:
,0:150,2:650,3:499,4:195,5:200,6:288075,7:78779,8:153151,9:40732,11:41,12:61018,13:21577,14:84,17:1040,18:258,19:156


chrom: chr1
strand: -
right_annotated: ENSMUSG00000052534.15:Pbx1:protein_coding:9366
samples:
,0:31631,1:16383,2:708864,3:421470,4:202467,5:244060,6:3043421,7:633846,8:1009120,9:608426,10:1687854,11:2355427,12:182079,13:109863,14:357544,15:232489,16:261967,17:258965,18:276574,19:193549


chrom: chr1
strand: -
right_annotated: ENSMUSG00000058622.1:Gm5265:processed_pseudogene:342
samples:
,0:5390,1:2980,2:3438,3:1197,4:1148,5:1746,6:2726,7:461,8:1336,9:1272,10:565,11:533,12:119,13:42,14:379,15:589,16:1131,17:599,18:1047,19:933


chrom: chr1
strand: +
right_annotated: ENSMUSG00000026678.10:Rgs5:protein_coding:4546
samples:
,0:7628,1:3146,2:425548,3:88901,4:51631,5:44736,6:34530,7:7828,8:31,9:1480,11:68,12:239305,13:87744,14:12464,15:42748,16:31085,17:15089,18:20161,19:18582


chrom: chr1
strand: -
right_annotated: ENSMUSG00000038530.11:Rgs4:protein_coding:2941
samples:
,0:1350,1:1547,2:32663,3:5566,4:10408,5:6687,6:13717,7:11616,8:73034,11:15133,14:573108,15:523348,16:1441139,17:904452,18:735895,19:488948


chrom: chr1
strand: +
right_annotated: ENSMUSG00000070532.5:Ccdc190:protein_coding:1734
samples:
,0:8329,1:6638,2:1689,3:1263,4:1341,5:1102,6:58495,7:5892,8:1426,9:16441,15:87,16:1596,18:1198,19:634


chrom: chr1
strand: -
right_annotated: ENSMUSG00000026675.12:Hsd17b7:protein_coding:5046
samples:
,0:22990,1:12384,2:10624170,3:97733,4:61201,5:108040,6:1094595,7:218481,8:420954,9:296638,10:359727,11:1001917,12:56891,13:41884,14:59754,15:20797,16:48633,17:95291,18:28406,19:31925


chrom: chr1
strand: +
right_annotated: ENSMUSG00000097503.2:3110045C21Rik:antisense_RNA:1135
samples:
,0:550,1:434,2:23360,3:1955,4:1073,5:2380,6:43432,7:13287,8:64502,9:18812,11:21318,12:3285,15:3075,16:1741,17:10501,18:629,19:499


chrom: chr1
strand: -
right_annotated: ENSMUSG00000026674.9:Ddr2:protein_coding:8590
samples:
,0:16763,1:11286,2:250495,3:198374,4:132539,5:116946,6:6175,7:2071,8:3068,9:95,11:1534,12:40864,13:3027,14:2381,15:372,16:121,17:1434,18:4245,19:3184


chrom: chr1
strand: -
right_annotated: ENSMUSG00000026670.15:Uap1:protein_coding:2362
samples:
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chrom: chr1
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samples:
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chrom: chr1
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samples:
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chrom: chr1
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right_annotated: ENSMUSG00000038473.14:Nos1ap:protein_coding:3733
samples:
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chrom: chr1
strand: +
right_annotated: ENSMUSG00000102193.1:Gm7299:processed_pseudogene:581
samples:
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chrom: chr1
strand: +
right_annotated: ENSMUSG00000038463.8:Olfml2b:protein_coding:3095
samples:
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chrom: chr1
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samples:
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chrom: chr1
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right_annotated: ENSMUSG00000053925.4:Gm9929:processed_transcript:1671
samples:
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chrom: chr1
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samples:
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chrom: chr1
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samples:
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chrom: chr1
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samples:
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chrom: chr1
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samples:
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chrom: chr1
strand: -
right_annotated: ENSMUSG00000026656.15:Fcgr2b:protein_coding:3810
samples:
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chrom: chr1
strand: +
right_annotated: ENSMUSG00000026649.14:Cfap126:protein_coding:1213
samples:
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chrom: chr1
strand: -
right_annotated: ENSMUSG00000058076.12:Sdhc:protein_coding:3171
samples:
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chrom: chr1
strand: -
right_annotated: ENSMUSG00000038370.6:Pcp4l1:protein_coding:1577
samples:
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chrom: chr1
strand: +
right_annotated: ENSMUSG00000005677.14:Nr1i3:protein_coding:3270
samples:
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chrom: chr1
strand: -
right_annotated: ENSMUSG00000005674.9:Tomm40l:protein_coding:4743
samples:
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chrom: chr1
strand: -
right_annotated: ENSMUSG00000013593.12:Ndufs2:protein_coding:1623
samples:
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chrom: chr1
strand: +
right_annotated: ENSMUSG00000006403.13:Adamts4:protein_coding:4810
samples:
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chrom: chr1
strand: +
right_annotated: ENSMUSG00000052423.14:B4galt3:protein_coding:2113
samples:
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chrom: chr1
strand: -
right_annotated: ENSMUSG00000062729.11:Ppox:protein_coding:1821
samples:
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chrom: chr1
strand: -
right_annotated: ENSMUSG00000053483.13:Usp21:protein_coding:2358
samples:
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chrom: chr1
strand: -
right_annotated: ENSMUSG00000062963.10:Ufc1:protein_coding:1100
samples:
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chrom: chr1
strand: -
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samples:
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chrom: chr1
strand: -
right_annotated: ENSMUSG00000103983.1:Gm20045:lincRNA:5577
samples:
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chrom: chr1
strand: +
right_annotated: ENSMUSG00000013973.12:Dedd:protein_coding:2755
samples:
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chrom: chr1
strand: -
right_annotated: ENSMUSG00000013997.10:Nit1:protein_coding:3671
samples:
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chrom: chr1
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right_annotated: ENSMUSG00000006412.10:Pfdn2:protein_coding:1735
samples:
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chrom: chr1
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samples:
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chrom: chr1
strand: +
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samples:
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chrom: chr1
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samples:
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chrom: chr1
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samples:
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chrom: chr1
strand: -
right_annotated: ENSMUSG00000097045.1:Gm26641:lincRNA:954
samples:
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chrom: chr1
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samples:
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chrom: chr1
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samples:
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chrom: chr1
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samples:
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chrom: chr1
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samples:
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chrom: chr1
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samples:
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chrom: chr1
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samples:
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chrom: chr1
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samples:
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chrom: chr1
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samples:
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chrom: chr1
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samples:
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chrom: chr1
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samples:
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chrom: chr1
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samples:
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chrom: chr1
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samples:
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chrom: chr1
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samples:
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chrom: chr1
strand: +
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samples:
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chrom: chr1
strand: -
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samples:
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chrom: chr1
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samples:
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chrom: chr1
strand: +
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samples:
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chrom: chr1
strand: -
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samples:
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chrom: chr1
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samples:
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chrom: chr1
strand: +
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samples:
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chrom: chr1
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samples:
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chrom: chr1
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right_annotated: ENSMUSG00000037995.15:Igsf9:protein_coding:4251
samples:
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chrom: chr1
strand: +
right_annotated: ENSMUSG00000026547.15:Tagln2:protein_coding:1649
samples:
,0:5926,1:5168,2:307812,3:152674,4:102788,5:102053,6:646428,7:107774,8:398748,9:309840,10:546503,11:127344,12:39067,13:127979,16:50,17:5296


chrom: chr1
strand: +
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samples:
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chrom: chr1
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samples:
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chrom: chr1
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samples:
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chrom: chr1
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samples:
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chrom: chr1
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samples:
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chrom: chr1
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samples:
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chrom: chr1
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samples:
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chrom: chr1
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samples:
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chrom: chr1
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samples:
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chrom: chr1
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right_annotated: ENSMUSG00000026525.9:Opn3:protein_coding:1913
samples:
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chrom: chr1
strand: -
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samples:
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chrom: chr1
strand: +
right_annotated: ENSMUSG00000039748.11:Exo1:protein_coding:7796
samples:
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chrom: chr1
strand: -
right_annotated: ENSMUSG00000055214.15:Pld5:protein_coding:4661
samples:
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chrom: chr1
strand: -
right_annotated: ENSMUSG00000078184.1:Rbm8a2:protein_coding:1338
samples:
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chrom: chr1
strand: -
right_annotated: ENSMUSG00000057335.11:Cep170:protein_coding:9000
samples:
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chrom: chr1
strand: +
right_annotated: ENSMUSG00000103435.1:Gm36992:antisense_RNA:428
samples:
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chrom: chr1
strand: +
right_annotated: ENSMUSG00000026504.17:Sdccag8:protein_coding:3032
samples:
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chrom: chr1
strand: -
right_annotated: ENSMUSG00000103584.1:Gm38053:unprocessed_pseudogene:160
samples:
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chrom: chr1
strand: -
right_annotated: ENSMUSG00000019699.16:Akt3:protein_coding:4980
samples:
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chrom: chr1
strand: -
right_annotated: ENSMUSG00000103646.1:Gm37706:TEC:2765
samples:
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chrom: chr1
strand: +
right_annotated: ENSMUSG00000063659.11:Zbtb18:protein_coding:5590
samples:
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chrom: chr1
strand: -
right_annotated: ENSMUSG00000015961.8:Adss:protein_coding:2771
samples:
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chrom: chr1
strand: +
right_annotated: ENSMUSG00000089657.1:Gm16585:processed_pseudogene:610
samples:
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chrom: chr1
strand: -
right_annotated: ENSMUSG00000104097.1:Gm37313:unprocessed_pseudogene:290
samples:
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chrom: chr1
strand: +
right_annotated: ENSMUSG00000102493.1:Gm8010:unprocessed_pseudogene:873
samples:
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chrom: chr1
strand: +
right_annotated: ENSMUSG00000026502.13:Desi2:protein_coding:8990
samples:
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chrom: chr1
strand: +
right_annotated: ENSMUSG00000104126.1:Gm37486:processed_pseudogene:405
samples:
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chrom: chr1
strand: -
right_annotated: ENSMUSG00000086350.1:B230369F24Rik:antisense_RNA:2560
samples:
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chrom: chr1
strand: +
right_annotated: ENSMUSG00000026500.6:Cox20:protein_coding:471
samples:
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chrom: chr1
strand: -
right_annotated: ENSMUSG00000039630.10:Hnrnpu:protein_coding:7640
samples:
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chrom: chr1
strand: +
right_annotated: ENSMUSG00000104279.1:Gm38300:TEC:1870
samples:
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chrom: chr1
strand: +
right_annotated: ENSMUSG00000026495.8:Efcab2:protein_coding:3580
samples:
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chrom: chr1
strand: +
right_annotated: ENSMUSG00000026494.12:Kif26b:protein_coding:14165
samples:
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chrom: chr1
strand: -
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samples:
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chrom: chr1
strand: -
right_annotated: ENSMUSG00000096474.2:Gm5561:processed_pseudogene:480
samples:
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chrom: chr1
strand: -
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samples:
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chrom: chr1
strand: +
right_annotated: ENSMUSG00000038949.8:Cnst:protein_coding:4709
samples:
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chrom: chr1
strand: +
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samples:
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chrom: chr1
strand: -
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samples:
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chrom: chr1
strand: -
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samples:
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chrom: chr1
strand: +
right_annotated: ENSMUSG00000073486.2:Gm10518:protein_coding:1301
samples:
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chrom: chr1
strand: -
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samples:
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chrom: chr1
strand: +
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samples:
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chrom: chr1
strand: -
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samples:
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chrom: chr1
strand: -
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samples:
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chrom: chr1
strand: -
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samples:
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chrom: chr1
strand: -
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samples:
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chrom: chr1
strand: +
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samples:
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chrom: chr1
strand: +
right_annotated: ENSMUSG00000104388.1:Gm37033:TEC:7350
samples:
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chrom: chr1
strand: -
right_annotated: ENSMUSG00000053963.7:Stum:protein_coding:6552
samples:
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chrom: chr1
strand: +
right_annotated: ENSMUSG00000026496.11:Parp1:protein_coding:3873
samples:
,0:339663,1:224127,2:839748,3:478851,4:460257,5:804599,6:699183,7:127902,8:522369,9:285838,10:1205590,11:1594643,12:432208,13:372629,14:137126,15:73542,16:160729,17:163547,18:140793,19:108981


chrom: chr1
strand: +
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samples:
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chrom: chr1
strand: +
right_annotated: ENSMUSG00000058729.13:Lin9:protein_coding:3160
samples:
,0:77694,1:45188,2:78817,3:49784,4:27421,5:56702,6:181670,7:27616,8:149667,9:13327,10:210065,11:887,12:3789,13:318,14:8371,15:380,16:2951,17:16580,18:12110,19:8569


chrom: chr1
strand: +
right_annotated: ENSMUSG00000104202.1:Gm8101:processed_pseudogene:478
samples:
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chrom: chr1
strand: +
right_annotated: ENSMUSG00000026499.5:Acbd3:protein_coding:3471
samples:
,0:191038,1:118522,2:316511,3:152489,4:139095,5:269776,6:765212,7:113409,8:184470,9:105804,10:261236,11:199143,12:29661,13:72109,14:22407,15:29340,16:36422,17:18512,18:41869,19:20158


chrom: chr1
strand: -
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samples:
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chrom: chr1
strand: -
right_annotated: ENSMUSG00000060743.12:H3f3a:protein_coding:3001
samples:
,0:232944,1:150747,2:671418,3:388274,4:204963,5:328409,6:3911393,7:917209,8:1847991,9:1544563,10:2276175,11:1957538,12:315747,13:254130,14:77394,15:51739,16:110956,17:65509,18:79832,19:64578


chrom: chr1
strand: +
right_annotated: ENSMUSG00000097347.1:Gm17275:lincRNA:2550
samples:
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chrom: chr1
strand: +
right_annotated: ENSMUSG00000073485.3:H3f3aos:antisense_RNA:3044
samples:
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chrom: chr1
strand: +
right_annotated: ENSMUSG00000038806.7:Sde2:protein_coding:3213
samples:
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chrom: chr1
strand: -
right_annotated: ENSMUSG00000103979.1:Gm20305:processed_pseudogene:177
samples:
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chrom: chr1
strand: +
right_annotated: ENSMUSG00000026520.8:Pycr2:protein_coding:1580
samples:
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chrom: chr1
strand: +
right_annotated: ENSMUSG00000038793.8:Lefty1:protein_coding:1620
samples:
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chrom: chr1
strand: +
right_annotated: ENSMUSG00000026519.16:Tmem63a:protein_coding:3368
samples:
,0:8802,1:4979,2:177085,3:87746,4:58003,5:71055,6:129020,7:9513,8:22472,9:99009,10:45003,11:168443,12:33140,13:109356,15:118,18:50,19:248


chrom: chr1
strand: -
right_annotated: ENSMUSG00000103930.1:Gm36961:unprocessed_pseudogene:132
samples:
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chrom: chr1
strand: -
right_annotated: ENSMUSG00000038776.13:Ephx1:protein_coding:1741
samples:
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chrom: chr1
strand: -
right_annotated: ENSMUSG00000026516.8:Nvl:protein_coding:9392
samples:
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chrom: chr1
strand: +
right_annotated: ENSMUSG00000103178.1:Fgfr3-ps:processed_pseudogene:1137
samples:
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chrom: chr1
strand: +
right_annotated: ENSMUSG00000062169.13:Cnih4:protein_coding:3477
samples:
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chrom: chr1
strand: -
right_annotated: ENSMUSG00000038733.13:Wdr26:protein_coding:6619
samples:
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chrom: chr1
strand: -
right_annotated: ENSMUSG00000081214.3:Rpl35a-ps2:processed_pseudogene:333
samples:
,0:35140,1:23005,2:210037,3:139584,4:51883,5:58833,6:277735,7:70952,8:162322,9:130458,10:238137,11:120482,12:35607,13:23021,14:4837,15:3531,16:6758,17:2841,18:4893,19:3541


chrom: chr1
strand: +
right_annotated: ENSMUSG00000103260.1:Gm8146:processed_pseudogene:1847
samples:
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chrom: chr1
strand: +
right_annotated: ENSMUSG00000026514.14:Cnih3:protein_coding:2751
samples:
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chrom: chr1
strand: +
right_annotated: ENSMUSG00000047369.15:Dnah14:protein_coding:13696
samples:
,0:530029,1:391485,2:3183,3:1234,4:888,5:1534,6:3709,7:83,8:51,9:911,14:198,15:99,16:1085,18:5672,19:450


chrom: chr1
strand: -
right_annotated: ENSMUSG00000004880.11:Lbr:protein_coding:3510
samples:
,0:101823,1:69952,2:189926,3:128183,4:52106,5:59255,6:1886552,7:491323,8:934267,9:692345,10:130973,11:2161322,12:356815,13:281342,14:22320,15:15645,16:21848,17:9638,18:30261,19:18516


chrom: chr1
strand: -
right_annotated: ENSMUSG00000022995.16:Enah:protein_coding:12541
samples:
,0:439909,1:276050,2:1050535,3:462968,4:446932,5:963813,6:8673526,7:1530947,8:2644169,9:1881591,10:2240908,11:2130199,12:104308,13:330163,14:81759,15:50120,16:86907,17:41639,18:62483,19:42908


chrom: chr1
strand: -
right_annotated: ENSMUSG00000102950.1:Gm37018:TEC:3869
samples:
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chrom: chr1
strand: +
right_annotated: ENSMUSG00000026511.7:Srp9:protein_coding:1380
samples:
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chrom: chr1
strand: -
right_annotated: ENSMUSG00000038633.5:Degs1:protein_coding:2048
samples:
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chrom: chr1
strand: -
right_annotated: ENSMUSG00000047539.9:Fbxo28:protein_coding:4925
samples:
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chrom: chr1
strand: -
right_annotated: ENSMUSG00000097260.1:Gm5706:processed_pseudogene:993
samples:
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chrom: chr1
strand: +
right_annotated: ENSMUSG00000026510.10:Trp53bp2:protein_coding:4361
samples:
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chrom: chr1
strand: -
right_annotated: ENSMUSG00000026509.15:Capn2:protein_coding:3225
samples:
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chrom: chr1
strand: +
right_annotated: ENSMUSG00000102234.1:Gm37885:antisense_RNA:1985
samples:
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chrom: chr1
strand: +
right_annotated: ENSMUSG00000038576.15:Susd4:protein_coding:3368
samples:
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chrom: chr1
strand: -
right_annotated: ENSMUSG00000030768.12:Disp1:protein_coding:5071
samples:
,0:12951,1:8127,2:148864,3:74341,4:87201,5:130242,6:23611,7:7493,8:30878,9:25446,14:9892,15:1323,16:425,17:367,19:1820


chrom: chr1
strand: -
right_annotated: ENSMUSG00000102478.1:BC085271:transcribed_processed_pseudogene:1487
samples:
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chrom: chr1
strand: -
right_annotated: ENSMUSG00000046836.13:Brox:protein_coding:3505
samples:
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chrom: chr1
strand: +
right_annotated: ENSMUSG00000042901.10:Aida:protein_coding:4279
samples:
,0:66780,1:42238,2:189552,3:100120,4:148830,5:288524,6:248819,7:84466,8:85416,9:154071,10:337242,11:382051,12:83592,13:14124,14:23700,15:19211,16:24473,17:30080,18:26263,19:19991


chrom: chr1
strand: -
right_annotated: ENSMUSG00000056050.12:Mia3:protein_coding:2961
samples:
,0:213116,1:135699,2:325426,3:190276,4:151047,5:243904,6:975865,7:136374,8:330487,9:253864,10:197514,11:338888,12:60429,13:82992,14:156966,15:113507,16:130142,17:96212,18:154100,19:136699


chrom: chr1
strand: +
right_annotated: ENSMUSG00000072258.10:Taf1a:protein_coding:1472
samples:
,0:36832,1:18873,2:74745,3:37832,4:28340,5:41322,6:184898,7:13263,8:63910,9:69465,10:250835,11:83,12:19216,13:15740,14:213,15:12050,16:16770,17:7478,18:11593,19:5543


chrom: chr1
strand: +
right_annotated: ENSMUSG00000104022.1:Gm37214:sense_intronic:916
samples:
,0:268,1:143,2:150,3:8,4:100,6:2741,7:6590,8:1557,9:339,10:466,11:561,12:220,13:90,14:50,16:50,18:50


chrom: chr1
strand: +
right_annotated: ENSMUSG00000039384.8:Dusp10:protein_coding:2792
samples:
,0:90065,1:57534,2:39983,3:16290,4:33102,5:63175,6:379443,7:86309,8:192757,9:180406,10:90,11:253435,12:68,13:1758,15:121,18:692


chrom: chr1
strand: +
right_annotated: ENSMUSG00000102606.1:Rpl21-ps1:processed_pseudogene:480
samples:
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chrom: chr1
strand: +
right_annotated: ENSMUSG00000103314.1:Gm38358:processed_pseudogene:428
samples:
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chrom: chr1
strand: -
right_annotated: ENSMUSG00000039377.7:Hlx:protein_coding:2278
samples:
,0:2733,1:959,2:41544,3:2884,4:15722,5:15612,6:3985,7:2604,8:3686,9:2273,10:2499,11:3533,12:5228,13:7406,15:29,16:65,17:62


chrom: chr1
strand: -
right_annotated: ENSMUSG00000073481.9:Marc2:protein_coding:1917
samples:
,0:76358,1:39258,2:665937,3:321577,4:259725,5:411563,6:206951,7:41744,8:127859,9:113585,10:47482,11:52495,12:80014,13:32131,14:60971,15:38979,16:65084,17:52073,18:44182,19:54623


chrom: chr1
strand: -
right_annotated: ENSMUSG00000088559.1:Mir1981:miRNA:82
samples:
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chrom: chr1
strand: -
right_annotated: ENSMUSG00000039349.5:C130074G19Rik:protein_coding:3035
samples:
,0:32732,1:16475,2:901809,3:380005,4:159683,5:215112,6:5093,7:979,8:14897,14:3547,15:1192,16:286,18:656,19:1327


chrom: chr1
strand: -
right_annotated: ENSMUSG00000026620.11:Mark1:protein_coding:4221
samples:
,0:16150,1:9632,2:312690,3:140283,4:27298,5:36166,6:341165,7:47390,8:76235,9:50065,10:80739,11:20641,12:21653,13:33376,14:79932,15:42738,16:73224,17:80835,18:52042,19:43767


chrom: chr1
strand: +
right_annotated: ENSMUSG00000039318.12:Rab3gap2:protein_coding:7052
samples:
,0:142012,1:96926,2:293709,3:165013,4:143764,5:246371,6:493249,7:43292,8:162069,9:103556,10:17474,11:58966,12:121412,13:37823,14:111732,15:61878,16:106836,17:174244,18:85627,19:80139


chrom: chr1
strand: -
right_annotated: ENSMUSG00000103613.1:Gm34882:antisense_RNA:974
samples:
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chrom: chr1
strand: -
right_annotated: ENSMUSG00000026618.11:Iars2:protein_coding:6670
samples:
,0:143067,1:91132,2:645997,3:300835,4:203046,5:367361,6:776365,7:68663,8:107361,9:55017,10:169106,11:53063,12:102156,13:23278,14:96781,15:66625,16:66866,17:104828,18:158729,19:118727


chrom: chr1
strand: +
right_annotated: ENSMUSG00000102526.1:Gm37785:TEC:2408
samples:
,0:2958,1:1494,2:560,3:1182,4:400,5:846,6:2376,7:770,8:1372,11:43,13:119,15:4265,16:3029,17:7444,18:2047,19:2088


chrom: chr1
strand: +
right_annotated: ENSMUSG00000026617.16:Bpnt1:protein_coding:2245
samples:
,0:60265,1:40165,2:262568,3:111733,4:52695,5:80614,6:446096,7:134333,8:338732,9:265771,10:31166,11:859652,12:25071,13:36653,14:159730,15:103774,16:238807,17:253928,18:164022,19:160310


chrom: chr1
strand: -
right_annotated: ENSMUSG00000097261.2:4930532G15Rik:lincRNA:1866
samples:
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chrom: chr1
strand: +
right_annotated: ENSMUSG00000026615.14:Eprs:protein_coding:4906
samples:
,0:384685,1:240136,2:998636,3:659725,4:261469,5:389130,6:1941047,7:353174,8:1433482,9:928874,10:1192127,11:2619972,12:125748,13:421490,14:375183,15:134899,16:280513,17:242790,18:320981,19:235814


chrom: chr1
strand: -
right_annotated: ENSMUSG00000102546.1:Gm9722:processed_pseudogene:802
samples:
,0:1984,1:926,2:6448,3:4412,4:1967,5:2736,6:4465,7:401,8:2974,9:1521,10:484,11:2619,12:148,13:162,14:432,15:241,16:350,17:247,18:520,19:150


chrom: chr1
strand: -
right_annotated: ENSMUSG00000039246.8:Lyplal1:protein_coding:1578
samples:
,0:12170,1:7316,2:61001,3:55684,4:41947,5:71507,6:631921,7:107089,8:522947,9:323755,10:827656,11:988849,12:62557,13:139162,14:31718,15:3471,16:4143,17:17652,18:4303,19:8076


chrom: chr1
strand: -
right_annotated: ENSMUSG00000039239.14:Tgfb2:protein_coding:5200
samples:
,0:2302,1:1300,2:49538,3:32509,4:50559,5:50288,6:5016923,7:524196,8:1878848,9:1311722,10:2895777,11:5296096,12:1273036,13:414865,14:6164,15:5516,16:22095,17:3320,18:36110,19:40446


chrom: chr1
strand: +
right_annotated: ENSMUSG00000100393.1:Gm29491:antisense_RNA:506
samples:
,0:50,2:307,3:157,4:520,5:251,6:19983,7:1612,8:5034,9:5869,10:8733,11:30343,12:20322,13:665,15:120,16:410,18:890,19:1482


chrom: chr1
strand: -
right_annotated: ENSMUSG00000001305.5:Rrp15:protein_coding:1321
samples:
,0:35396,1:20671,2:102861,3:77908,4:33800,5:56227,6:139294,7:26592,8:137516,9:145554,10:248828,11:100669,12:70306,13:8419,14:15233,15:12593,16:5899,17:17988,18:12057,19:7796


chrom: chr1
strand: +
right_annotated: ENSMUSG00000097784.1:A430105J06Rik:lincRNA:1275
samples:
,0:5352,1:3305,2:5205,3:2172,4:1654,5:3984,6:9331,7:2848,8:317,9:6461,11:112,13:6683,15:172,18:247,19:100


chrom: chr1
strand: +
right_annotated: ENSMUSG00000097935.1:Gm3809:processed_pseudogene:1006
samples:
,0:1750,1:1200,2:6737,3:5455,4:1838,5:4107,6:4747,7:504,8:2129,9:2231,10:1483,11:2474,12:526,13:518,14:2923,15:2987,16:5114,17:3859,18:5267,19:3766


chrom: chr1
strand: +
right_annotated: ENSMUSG00000039224.1:D1Pas1:protein_coding:3212
samples:
,0:827895,1:543708,2:2971,3:1038,4:1098,5:2154,6:312,8:70,9:65,10:65,13:80,14:77,16:30,17:449,18:334,19:83


chrom: chr1
strand: +
right_annotated: ENSMUSG00000039210.16:Gpatch2:protein_coding:5452
samples:
,0:235826,1:158475,2:103752,3:67184,4:65382,5:114677,6:372043,7:80489,8:135440,9:176431,10:31798,11:385354,12:88610,13:65367,14:10593,15:34974,16:49695,17:16379,18:26039,19:16247


chrom: chr1
strand: +
right_annotated: ENSMUSG00000104394.2:Gm37254:TEC:3901
samples:
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chrom: chr1
strand: +
right_annotated: ENSMUSG00000026610.13:Esrrg:protein_coding:5680
samples:
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chrom: chr1
strand: +
right_annotated: ENSMUSG00000026609.15:Ush2a:protein_coding:15695
samples:
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chrom: chr1
strand: -
right_annotated: ENSMUSG00000026608.12:Kctd3:protein_coding:3706
samples:
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chrom: chr1
strand: -
right_annotated: ENSMUSG00000037624.15:Kcnk2:protein_coding:4193
samples:
,0:11072,1:7570,2:113345,3:58186,4:32720,5:38407,6:15327,7:1869,9:485,12:67,13:53,14:102535,15:83900,16:112878,17:119153,18:86617,19:71076


chrom: chr1
strand: -
right_annotated: ENSMUSG00000102824.1:Pdcd5-ps:processed_pseudogene:381
samples:
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chrom: chr1
strand: -
right_annotated: ENSMUSG00000026605.14:Cenpf:protein_coding:11130
samples:
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chrom: chr1
strand: +
right_annotated: ENSMUSG00000103374.1:Gm37239:processed_pseudogene:141
samples:
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chrom: chr1
strand: +
right_annotated: ENSMUSG00000026604.17:Ptpn14:protein_coding:10746
samples:
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chrom: chr1
strand: +
right_annotated: ENSMUSG00000104435.1:Gm37422:antisense_RNA:4718
samples:
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chrom: chr1
strand: -
right_annotated: ENSMUSG00000026603.13:Smyd2:protein_coding:1680
samples:
,0:62005,1:39373,2:304149,3:198249,4:216534,5:366488,6:311112,7:43535,8:150806,9:183449,10:171393,11:129818,12:214538,13:29247,14:117038,15:101427,16:163402,17:212910,18:128822,19:88408


chrom: chr1
strand: -
right_annotated: ENSMUSG00000010175.13:Prox1:protein_coding:8390
samples:
,0:38687,1:23520,2:19079,3:19324,4:14945,5:12901,6:696202,7:55753,8:174515,9:87960,10:238101,11:907883,12:89559,13:248844,18:1650


chrom: chr1
strand: +
right_annotated: ENSMUSG00000079045.3:Prox1os:antisense_RNA:828
samples:
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chrom: chr1
strand: -
right_annotated: ENSMUSG00000089872.10:Rps6kc1:protein_coding:3995
samples:
,0:18750,1:15524,2:98712,3:57860,4:48629,5:84671,6:48052,7:8311,8:36913,9:14576,10:135218,11:3465,12:1373,13:60463,14:60611,15:46108,16:129179,17:68565,18:83961,19:74429


chrom: chr1
strand: +
right_annotated: ENSMUSG00000026634.16:Angel2:protein_coding:3829
samples:
,0:149832,1:96069,2:293585,3:156264,4:112317,5:183485,6:1825781,7:686200,8:742649,9:715960,10:502226,11:1093212,12:432512,13:349283,14:150804,15:59420,16:115639,17:157429,18:132601,19:107376


chrom: chr1
strand: -
right_annotated: ENSMUSG00000037568.12:Vash2:protein_coding:4194
samples:
,0:470847,1:305768,2:14385,3:13546,4:7738,5:28909,6:275107,7:22150,8:87939,9:28717,10:357381,11:78555,12:249125,13:68360,15:1950,16:6279,17:600,18:1328,19:2989


chrom: chr1
strand: -
right_annotated: ENSMUSG00000066595.9:Mfsd7b:protein_coding:4508
samples:
,0:20346,1:12165,2:100923,3:43935,4:16742,5:24369,6:338843,7:62990,8:181127,9:63916,10:85701,11:667074,12:84359,13:90,14:89,15:5047,16:784,17:18652,18:12047,19:6138


chrom: chr1
strand: -
right_annotated: ENSMUSG00000026632.17:Tatdn3:protein_coding:1258
samples:
,0:32585,1:24340,2:46256,3:32134,4:11592,5:12765,6:164768,7:34058,8:85861,9:144118,10:174879,11:109125,12:540,13:29057,14:5196,15:4865,16:23271,17:700,18:18901,19:13002


chrom: chr1
strand: -
right_annotated: ENSMUSG00000026628.13:Atf3:protein_coding:2154
samples:
,0:1031,1:196,2:10931,3:9225,4:23207,5:46970,6:5033041,7:680005,8:4262321,9:2467654,10:3963500,11:3318741,12:558260,13:92836


chrom: chr1
strand: +
right_annotated: ENSMUSG00000073478.6:D730003I15Rik:lincRNA:1687
samples:
,0:3181,1:1097,2:17258,3:5488,4:4493,5:7524,6:83769,7:18877,8:43391,9:18022,10:54649,11:4700,12:7528,14:5751,15:4032,17:5067,18:3987,19:8222


chrom: chr1
strand: -
right_annotated: ENSMUSG00000037499.9:Nenf:protein_coding:742
samples:
,0:33969,1:16796,2:376403,3:229974,4:223448,5:319602,6:126663,7:30928,8:74807,9:44260,10:19006,11:47843,12:78814,13:20575,14:112800,15:85246,16:107092,17:115181,18:93378,19:65748


chrom: chr1
strand: +
right_annotated: ENSMUSG00000026627.7:Tmem206:protein_coding:2246
samples:
,0:84519,1:48785,2:290219,3:223891,4:153363,5:314650,6:125980,7:24494,8:132271,9:178883,10:307294,11:189344,12:39716,13:105545,14:18487,15:9722,16:25950,17:31980,18:30223,19:14477


chrom: chr1
strand: -
right_annotated: ENSMUSG00000026626.11:Ppp2r5a:protein_coding:3088
samples:
,0:68436,1:43830,2:445143,3:235484,4:116163,5:154858,6:1149434,7:151717,8:222325,9:97415,10:481618,11:87484,12:100819,13:3825,14:60051,15:32823,16:71151,17:50302,18:41557,19:33346


chrom: chr1
strand: +
right_annotated: ENSMUSG00000103433.1:Gm2272:processed_pseudogene:582
samples:
,0:19750,1:11310,2:18649,3:10532,4:8399,5:16858,6:564,7:68,8:311,9:529,10:74,11:90,12:124,14:500,15:577,16:1650,17:550,18:850,19:1150


chrom: chr1
strand: -
right_annotated: ENSMUSG00000037474.13:Dtl:protein_coding:4212
samples:
,0:181540,1:124524,2:186669,3:169235,4:25081,5:35896,6:268372,7:26138,8:92389,9:43058,10:123,11:157845,13:6392,14:25097,15:21782,16:104686,17:45522,18:26164,19:21693


chrom: chr1
strand: +
right_annotated: ENSMUSG00000037461.10:Ints7:protein_coding:5347
samples:
,0:148660,1:102937,2:301079,3:161451,4:50139,5:91961,6:1920762,7:246203,8:722223,9:390770,10:78713,11:715182,12:329160,13:87278,14:25634,15:76841,16:110337,17:115423,18:120819,19:63830


chrom: chr1
strand: +
right_annotated: ENSMUSG00000026623.16:Lpgat1:protein_coding:7442
samples:
,0:388380,1:262573,2:439225,3:303132,4:114191,5:131700,6:1417111,7:220982,8:332658,9:288395,10:40067,11:200670,12:120990,13:2267,14:685045,15:459480,16:691705,17:615356,18:319228,19:309144


chrom: chr1
strand: +
right_annotated: ENSMUSG00000026622.15:Nek2:protein_coding:3227
samples:
,0:608923,1:410301,2:89249,3:77730,4:11694,5:15116,6:81118,7:11383,8:26184,9:20927,15:100,16:9680,18:4585,19:4077


chrom: chr1
strand: -
right_annotated: ENSMUSG00000055833.14:1700034H15Rik:antisense_RNA:5789
samples:
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chrom: chr1
strand: +
right_annotated: ENSMUSG00000037434.7:Slc30a1:protein_coding:5244
samples:
,0:173061,1:98330,2:169702,3:74790,4:132794,5:230312,6:113676,7:45749,8:68163,9:55907,10:70673,11:7992,12:30532,13:1973,14:4475,15:5534,16:8216,17:14005,18:8122,19:4387


chrom: chr1
strand: -
right_annotated: ENSMUSG00000097416.2:Gm26670:antisense_RNA:3287
samples:
,0:8806,1:7092,2:3108,3:4983,4:6523,5:9914,6:12610,7:3670,8:9533,9:29810,10:3408,11:169,15:345,18:224


chrom: chr1
strand: -
right_annotated: ENSMUSG00000026637.13:Traf5:protein_coding:1964
samples:
,0:6584,1:3902,2:33859,3:17161,4:11736,5:11297,6:5645,7:1068,9:19778,10:1891,11:4753,14:4814,15:11882,16:30174,17:28054,18:11093,19:1648


chrom: chr1
strand: -
right_annotated: ENSMUSG00000103653.1:Gstp-ps:processed_pseudogene:631
samples:
,0:21546,1:12586,2:162721,3:96237,4:89602,5:131440,6:959336,7:158902,8:459094,9:415820,10:1423785,11:723325,12:187578,13:140888,14:111881,15:61626,16:122679,17:133602,18:127864,19:103809


chrom: chr1
strand: +
right_annotated: ENSMUSG00000097089.2:Gm26879:antisense_RNA:1176
samples:
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chrom: chr1
strand: -
right_annotated: ENSMUSG00000037395.15:Rcor3:protein_coding:4327
samples:
,0:334896,1:228473,2:123773,3:70665,4:82267,5:149981,6:1737072,7:216102,8:409994,9:229333,10:99190,11:638536,12:101702,13:18978,14:36344,15:12598,16:31570,17:19884,18:59616,19:30341


chrom: chr1
strand: +
right_annotated: ENSMUSG00000097316.2:Gm10516:antisense_RNA:2615
samples:
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chrom: chr1
strand: +
right_annotated: ENSMUSG00000058248.12:Kcnh1:protein_coding:7242
samples:
,0:4587,1:1445,2:79073,3:26751,4:3247,5:3760,14:148114,15:80193,16:170205,17:162908,18:108359,19:90228


chrom: chr1
strand: -
right_annotated: ENSMUSG00000037375.16:Hhat:protein_coding:2977
samples:
,0:9404,1:5090,2:38333,3:30607,4:12696,5:19957,6:64397,7:10731,8:58240,9:22374,10:2030,11:2488,12:25929,13:970,15:350,16:1593,17:11659,18:6970,19:900


chrom: chr1
strand: -
right_annotated: ENSMUSG00000016262.14:Sertad4:protein_coding:3405
samples:
,0:13126,1:6233,2:75940,3:44844,4:23248,5:27198,6:518720,7:80821,8:431259,9:172332,10:19360,11:355849,12:47654,13:131,14:33857,15:6644,16:26114,17:32757,18:21561,19:20741


chrom: chr1
strand: +
right_annotated: ENSMUSG00000089812.2:Gm15867:antisense_RNA:388
samples:
,0:100,2:4054,3:1942,4:1163,5:850,6:3184,7:433,8:3699,9:3998,10:6820,14:129,15:205,16:1559,18:250,19:452


chrom: chr1
strand: +
right_annotated: ENSMUSG00000102162.1:Gm2367:processed_pseudogene:472
samples:
,0:1131,1:942,2:6588,3:5834,4:2840,5:2781,6:1844,7:688,8:9543,9:1513,10:1608,11:1176,12:242,13:217,14:258,15:80,16:460,17:151,18:539,19:171


chrom: chr1
strand: -
right_annotated: ENSMUSG00000016200.14:Syt14:protein_coding:9331
samples:
,0:18588,1:11155,2:152477,3:71195,4:82103,5:165693,6:989547,7:227625,8:354216,9:300062,10:454397,11:1513924,12:15111,13:187224,14:34780,15:7545,16:24652,17:21048,18:11838,19:5329


chrom: chr1
strand: -
right_annotated: ENSMUSG00000016181.9:Diexf:protein_coding:5570
samples:
,0:23542,1:14183,2:116984,3:66321,4:40971,5:69298,6:132860,7:14075,8:26804,9:21615,10:13424,11:304697,12:90,13:1060,14:5735,15:4736,16:10278,18:17847,19:2429


chrom: chr1
strand: +
right_annotated: ENSMUSG00000026638.15:Irf6:protein_coding:4113
samples:
,0:71273,1:43233,2:66037,3:40009,4:18830,5:25728,6:2037668,7:462349,8:727430,9:607694,10:620491,11:1820454,12:177680,13:183330,18:118


chrom: chr1
strand: +
right_annotated: ENSMUSG00000079144.7:A130010J15Rik:protein_coding:4040
samples:
,0:43827,1:29009,2:47955,3:29007,4:13156,5:22201,6:1025510,7:132137,8:298103,9:164099,10:77777,11:832665,12:5234,13:39893,14:17719,15:10455,16:12912,18:8481,19:1988


chrom: chr1
strand: -
right_annotated: ENSMUSG00000037318.10:Traf3ip3:protein_coding:2173
samples:
,0:1803,1:1494,2:10057,3:5953,4:4789,5:5837,6:82038,7:6247,8:8374,9:11197,11:56557,12:151,14:2257,15:2071,16:1594,18:202,19:150


chrom: chr1
strand: -
right_annotated: ENSMUSG00000016179.11:Camk1g:protein_coding:2469
samples:
,0:14734,1:9275,2:5845,3:7968,4:2864,5:3845,6:73150,7:4366,8:68133,9:4103,11:3953,13:50356,14:20705,15:17500,16:72349,17:49395,18:23738,19:19094


chrom: chr1
strand: +
right_annotated: ENSMUSG00000102648.1:Gm38022:processed_pseudogene:403
samples:
,0:329,1:150,2:231,3:76,4:80,5:77,6:794,7:201,8:869,9:492,10:251,11:111,12:48,13:48,15:50,16:98,19:100


chrom: chr1
strand: +
right_annotated: ENSMUSG00000026640.12:Plxna2:protein_coding:11040
samples:
,0:102191,1:77928,2:238502,3:111560,4:53108,5:45791,6:343253,7:37392,8:32634,9:36373,10:51891,11:742955,14:548440,15:401944,16:561950,17:483834,18:515111,19:273441


chrom: chr1
strand: +
right_annotated: ENSMUSG00000016494.9:Cd34:protein_coding:2610
samples:
,0:29761,1:19836,2:487358,3:258705,4:276223,5:317401,6:39135,7:8415,9:56485,14:346762,15:194516,16:502470,17:404333,18:392036,19:220251


chrom: chr1
strand: -
right_annotated: ENSMUSG00000097325.2:Gm16897:antisense_RNA:2492
samples:
,0:14895,1:8549,2:36783,3:19689,4:23018,5:26190,6:1341,7:1822,9:3281,14:20791,15:14164,16:32133,17:28175,18:28997,19:17351


chrom: chr1
strand: +
right_annotated: ENSMUSG00000096929.7:A330023F24Rik:processed_transcript:4724
samples:
,0:6665,1:4011,2:12074,3:4136,4:5599,5:7200,6:28457,7:3921,8:1177,9:3870,10:6711,11:4512,12:134,14:11887,15:2311,16:3971,17:2875,18:5855,19:2146


chrom: chr1
strand: +
right_annotated: ENSMUSG00000104525.1:Gm37334:TEC:2938
samples:
,0:1898,1:1368,3:42,5:34,6:34334,7:7194,8:874,9:487,10:1492,11:477878,12:2923,13:4324,17:950,18:1239,19:609


chrom: chr1
strand: +
right_annotated: ENSMUSG00000103867.1:9630010A21Rik:TEC:2703
samples:
,0:100,1:100,3:100,4:200,5:99,6:186408,7:4084,8:16033,9:3302,10:10448,11:5359,13:545,14:3215,15:50,16:6839,17:7959,18:18537,19:4124


chrom: chr1
strand: -
right_annotated: ENSMUSG00000016493.13:Cd46:protein_coding:6288
samples:
,0:71809,1:41197,2:38179,3:19300,4:14790,5:23703,6:109430,7:17019,8:32127,9:6556,10:158751,11:2054,12:191627,13:64333,15:1027,16:956,17:619,18:26745,19:5419


chrom: chr1
strand: +
right_annotated: ENSMUSG00000104010.1:Gm37366:TEC:2297
samples:
,0:1901,1:1377,2:1024,3:600,4:601,5:1050,6:38177,7:1404,9:77,10:19367,15:200,16:28,17:959,18:2498,19:749


chrom: chr1
strand: -
right_annotated: ENSMUSG00000016481.15:Cr1l:protein_coding:3239
samples:
,0:14823,1:9098,2:240573,3:125650,4:81407,5:125993,6:584847,7:114421,8:346373,9:244809,10:900901,11:1063747,12:316411,13:23232,14:15203,15:24299,16:28684,17:40362,18:14914,19:16067


chrom: chr1
strand: -
right_annotated: ENSMUSG00000026616.15:Cr2:protein_coding:7344
samples:
,0:2925,1:1654,2:1629,3:398,4:53,5:403,6:1134,7:4610,8:6283,9:2333,15:532,16:1361,17:239,18:1253,19:200


chrom: chr10
strand: +
right_annotated: ENSMUSG00000040653.6:Ppp1r14c:protein_coding:2617
samples:
,0:2417,1:1271,2:1497,3:950,4:1794,5:1599,6:37217,7:4197,8:1327,9:24003,10:53161,11:8131,12:118619,13:8310,14:38511,15:27462,16:42075,17:26064,18:52790,19:37717


chrom: chr10
strand: +
right_annotated: ENSMUSG00000040624.17:Plekhg1:protein_coding:7428
samples:
,0:71842,1:43266,2:122398,3:50379,4:283914,5:722898,6:756543,7:91545,8:234967,9:254240,10:7174,11:326093,12:103253,13:60413,14:386,15:121,18:256,19:18


chrom: chr10
strand: -
right_annotated: ENSMUSG00000082605.1:Gm16148:processed_pseudogene:893
samples:
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chrom: chr10
strand: +
right_annotated: ENSMUSG00000040675.17:Mthfd1l:protein_coding:4270
samples:
,0:15653,1:9004,2:65527,3:89530,4:49721,5:75664,6:12574,7:4251,8:22559,9:10602,10:11943,11:312,12:1728,13:14661,14:3628,15:23642,16:17073,17:13326,18:11707,19:45815


chrom: chr10
strand: +
right_annotated: ENSMUSG00000082247.1:Gm16074:processed_pseudogene:444
samples:
,0:20780,1:13853,2:13466,3:7799,4:5096,5:7390,6:254,8:545,9:566,10:280,11:498,12:278,13:144,14:3300,15:2200,16:4109,17:3291,18:3399,19:3297


chrom: chr10
strand: +
right_annotated: ENSMUSG00000038587.9:Akap12:protein_coding:6335
samples:
,0:8793256,1:5690032,2:172565,3:118636,4:1011069,5:2066731,6:2284366,7:328354,8:845194,9:618421,10:38901,11:204644,12:13016,13:98055,14:25241,15:6895,16:20907,17:32982,18:21162,19:4902


chrom: chr10
strand: -
right_annotated: ENSMUSG00000075327.10:Zbtb2:protein_coding:3350
samples:
,0:9905,1:8165,2:81259,3:41470,4:26241,5:40155,6:188577,7:25541,8:95736,9:17051,10:38307,11:3839,12:23599,13:3842,14:2715,15:5792,16:21015,17:2086,18:4021,19:7465


chrom: chr10
strand: +
right_annotated: ENSMUSG00000095123.1:Gm21781:lincRNA:4838
samples:
,0:18923,1:9913,2:119332,3:47005,4:52752,5:126728,6:217313,7:32404,8:83724,9:1959,10:162,11:48633,12:229728,13:139927,14:5042,16:1546,17:8450,18:6614,19:14580


chrom: chr10
strand: -
right_annotated: ENSMUSG00000019763.11:Rmnd1:protein_coding:3139
samples:
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chrom: chr10
strand: +
right_annotated: ENSMUSG00000085687.1:Gm16153:processed_transcript:4118
samples:
,0:8096,1:4304,2:15681,3:10139,4:11673,5:23920,6:58171,7:12338,8:8023,9:17731,10:1091,11:3088,12:761,13:203,14:888,15:1685,16:949,17:949,18:600,19:3850


chrom: chr10
strand: +
right_annotated: ENSMUSG00000061759.15:Armt1:protein_coding:5328
samples:
,0:330540,1:199446,2:116145,3:69526,4:46379,5:80668,6:244408,7:38716,8:212298,9:122355,10:53176,11:380039,12:40482,14:40346,15:22882,16:51547,17:78810,18:32185,19:32973


chrom: chr10
strand: -
right_annotated: ENSMUSG00000096054.3:Syne1:protein_coding:30312
samples:
,0:37324,1:23473,2:204345,3:86834,4:141105,5:303294,6:59450,7:14999,8:15164,9:17479,10:66,11:45954,14:587711,15:501222,16:643983,17:557717,18:860398,19:599183


chrom: chr10
strand: -
right_annotated: ENSMUSG00000019773.7:Fbxo5:protein_coding:1940
samples:
,0:6349,1:4528,2:112907,3:94876,4:21910,5:33746,6:50270,7:6646,8:1403,9:618,10:2055,11:6877,12:82,13:11069,14:7136,15:849,16:3099,17:800,18:445,19:148


chrom: chr10
strand: -
right_annotated: ENSMUSG00000019774.8:Mtrf1l:protein_coding:2588
samples:
,0:10644,1:5141,2:72494,3:32904,4:36931,5:79298,6:81479,7:12905,8:29015,9:14876,10:100873,12:66220,13:23209,14:7476,15:6908,16:18016,17:8296,18:988,19:6831


chrom: chr10
strand: -
right_annotated: ENSMUSG00000019775.17:Rgs17:protein_coding:8191
samples:
,0:5587,1:3821,2:15114,3:9277,4:19492,5:79108,6:42175,7:4525,9:5781,11:816,14:170955,15:127699,16:181972,17:129189,18:94961,19:123431


chrom: chr10
strand: +
right_annotated: ENSMUSG00000112179.1:AC157092.1:processed_pseudogene:441
samples:
,0:2663,1:2083,2:842,3:147,4:244,5:248,6:2332,7:423,8:3212,9:2044,10:702,11:1692,12:140,13:68,14:496,15:200,16:476,17:917,18:830,19:516


chrom: chr10
strand: +
right_annotated: ENSMUSG00000000766.18:Oprm1:protein_coding:6770
samples:
,0:99,2:550,3:226,4:40,5:190,6:173,7:1,8:98,9:793,14:12248,15:10829,16:12448,17:3487,18:18507,19:5499


chrom: chr10
strand: -
right_annotated: ENSMUSG00000064065.15:Ipcef1:protein_coding:6610
samples:
,0:200,2:22922,3:16046,4:5618,5:8384,6:5278,7:1593,8:9238,9:1809,14:326228,15:377305,16:685211,17:602486,18:287867,19:274422


chrom: chr10
strand: +
right_annotated: ENSMUSG00000081926.1:Gm15536:processed_pseudogene:114
samples:
,0:412,1:475,2:3950,3:3238,4:1297,5:1786,6:137564,7:33208,8:110697,9:86530,10:216552,11:93707,12:19733,13:12189,14:603,15:377,16:559,17:527,18:889,19:442


chrom: chr10
strand: -
right_annotated: ENSMUSG00000015202.13:Cnksr3:protein_coding:3837
samples:
,0:39160,1:23284,2:91378,3:43595,4:119099,5:248394,6:63869,7:16040,8:10779,9:12272,10:11008,11:83267,12:72995,14:17949,15:9058,16:18297,17:28283,18:18338,19:8917


chrom: chr10
strand: +
right_annotated: ENSMUSG00000112474.1:AC147512.2:processed_pseudogene:553
samples:
,0:34078,1:19970,2:322947,3:213924,4:83395,5:99175,6:102627,7:23478,8:44754,9:41809,10:131603,11:62562,12:20109,13:17598,14:5647,15:3388,16:7691,17:3499,18:6943,19:4528


chrom: chr10
strand: +
right_annotated: ENSMUSG00000019796.12:Lrp11:protein_coding:3386
samples:
,0:24330,1:15312,2:152900,3:21155,4:74630,5:133520,6:223164,7:25172,8:78677,9:1431,10:177556,11:1882,12:44059,13:69763,14:626980,15:327928,16:566318,17:747458,18:414957,19:465050


chrom: chr10
strand: -
right_annotated: ENSMUSG00000019795.17:Pcmt1:protein_coding:2804
samples:
,0:658374,1:422301,2:271563,3:141034,4:111145,5:191976,6:791710,7:147529,8:473779,9:476987,10:569949,11:561613,12:191340,13:109254,14:443675,15:241564,16:362567,17:509002,18:384561,19:291293


chrom: chr10
strand: +
right_annotated: ENSMUSG00000040034.15:Nup43:protein_coding:1286
samples:
,0:64479,1:43678,2:82079,3:56651,4:20698,5:32448,6:181226,7:44091,8:33049,9:160598,10:196655,11:408538,12:32097,13:1962,14:17380,15:204,16:12615,17:7873,18:2930,19:4184


chrom: chr10
strand: +
right_annotated: ENSMUSG00000040021.13:Lats1:protein_coding:7297
samples:
,0:131734,1:83192,2:341864,3:196587,4:187213,5:383883,6:1227261,7:274209,8:318213,9:297172,10:58683,11:987246,12:10983,13:81162,14:12050,15:8363,16:6100,17:1836,18:22191,19:15785


chrom: chr10
strand: +
right_annotated: ENSMUSG00000019794.13:Katna1:protein_coding:1775
samples:
,0:67921,1:42616,2:176073,3:96559,4:57153,5:88667,6:389861,7:77125,8:315482,9:239836,10:554994,11:808151,12:75946,13:37731,14:23147,15:4885,16:35806,17:43027,18:9199,19:10764


chrom: chr10
strand: -
right_annotated: ENSMUSG00000092190.1:Gm20470:processed_transcript:331
samples:
,0:6748,1:4173,2:15888,3:8505,4:5392,5:9059,6:31162,7:7357,8:35501,9:19736,10:44972,11:78121,12:7180,13:2501,14:2445,15:1123,16:4104,17:4443,18:613,19:1077


chrom: chr10
strand: -
right_annotated: ENSMUSG00000040006.13:Ginm1:protein_coding:1860
samples:
,0:71307,1:41094,2:504894,3:250210,4:115678,5:174695,6:628744,7:146139,8:367202,9:291333,10:486507,11:433106,12:71408,13:83346,14:28730,15:11672,16:19602,17:21270,18:36671,19:16480


chrom: chr10
strand: +
right_annotated: ENSMUSG00000085211.2:B430219N15Rik:antisense_RNA:1173
samples:
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chrom: chr10
strand: +
right_annotated: ENSMUSG00000015757.10:Ppil4:protein_coding:3471
samples:
,0:110430,1:64438,2:227509,3:105236,4:80074,5:135274,6:1543431,7:302067,8:633973,9:626808,10:836358,11:894816,12:53733,13:111374,14:106435,15:75405,16:179046,17:186503,18:191649,19:201264


chrom: chr10
strand: -
right_annotated: ENSMUSG00000081497.1:Gm15560:processed_pseudogene:643
samples:
,0:299,1:295,2:419,3:102,4:100,5:1036,6:20215,7:1207,8:114,9:6852,10:1182,11:1470,12:312,13:164,14:150,15:1475,16:100,17:98,18:94,19:50


chrom: chr10
strand: -
right_annotated: ENSMUSG00000015755.16:Tab2:protein_coding:4380
samples:
,0:114439,1:70868,2:501054,3:286100,4:262119,5:462176,6:1272621,7:258708,8:354154,9:262322,10:273705,11:952611,12:98471,13:316715,14:17960,15:23594,16:25110,17:21562,18:41247,19:20821


chrom: chr10
strand: -
right_annotated: ENSMUSG00000047712.8:Ust:protein_coding:4228
samples:
,0:9432,1:5521,2:57127,3:28162,4:70480,5:125022,6:490673,7:42217,8:119003,9:154535,10:498,11:211080,12:168019,13:65887,14:23013,15:27720,16:45769,17:86144,18:46902,19:47357


chrom: chr10
strand: -
right_annotated: ENSMUSG00000015305.6:Sash1:protein_coding:7183
samples:
,0:46726,1:24344,2:279165,3:135464,4:116190,5:170444,6:108240,7:23305,8:25878,9:21461,10:19100,11:8929,12:205,13:8871,14:584,15:3584,16:1464,17:3836,18:1000,19:2631


chrom: chr10
strand: -
right_annotated: ENSMUSG00000060487.7:Samd5:protein_coding:6818
samples:
,0:548,1:50,2:23207,3:15680,4:14733,5:24816,6:128701,7:13374,11:36,12:50,14:1056,15:6866,16:4856,17:15648,18:13316,19:9277


chrom: chr10
strand: -
right_annotated: ENSMUSG00000019790.17:Stxbp5:protein_coding:9221
samples:
,0:85699,1:55841,2:186228,3:89485,4:55295,5:91676,6:441070,7:50963,8:61352,9:62488,10:146608,11:476548,12:10211,13:57255,14:136788,15:94280,16:189911,17:138671,18:229935,19:163061


chrom: chr10
strand: +
right_annotated: ENSMUSG00000108973.1:Gm44555:processed_pseudogene:148
samples:
,4:99,6:3498,7:1078,8:2499,9:1455,10:1720,11:1010,12:209,13:450,14:1140,15:987,16:1683,17:645,18:2654,19:246


chrom: chr10
strand: -
right_annotated: ENSMUSG00000050994.20:Adgb:protein_coding:6192
samples:
,0:438208,1:270986,2:2197,3:1147,4:6984,5:8598,6:53164,7:12365,8:390,9:17425,14:2373,16:664,18:1154,19:146


chrom: chr10
strand: +
right_annotated: ENSMUSG00000083257.1:Gm15568:processed_pseudogene:1213
samples:
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chrom: chr10
strand: +
right_annotated: ENSMUSG00000098065.1:Gm5177:transcribed_processed_pseudogene:3785
samples:
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chrom: chr10
strand: -
right_annotated: ENSMUSG00000019828.13:Grm1:protein_coding:7115
samples:
,0:44303,1:28555,2:254,3:639,4:148,6:1029,11:32,14:92849,15:37960,16:68564,17:75472,18:18392,19:36186


chrom: chr10
strand: +
right_annotated: ENSMUSG00000090112.8:Shprh:protein_coding:11548
samples:
,0:74052,1:47921,2:311630,3:142793,4:145483,5:267947,6:683754,7:215942,8:145861,9:227138,10:285632,11:354670,12:22132,13:86741,14:74817,15:63655,16:94841,17:123214,18:89458,19:53452


chrom: chr10
strand: -
right_annotated: ENSMUSG00000090070.1:Gm16577:antisense_RNA:471
samples:
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chrom: chr10
strand: +
right_annotated: ENSMUSG00000047648.13:Fbxo30:protein_coding:5197
samples:
,0:1021231,1:671980,2:179458,3:90859,4:51234,5:82770,6:494863,7:99664,8:93487,9:67544,10:255443,11:63238,12:180,14:32458,15:6760,16:11755,18:6584,19:8409


chrom: chr10
strand: +
right_annotated: ENSMUSG00000055493.4:Epm2a:protein_coding:3287
samples:
,0:16186,1:7649,2:55440,3:27872,4:32306,5:63394,6:72938,7:14301,8:31778,9:26277,14:14425,15:2058,16:16186,17:13558,18:7465,19:3194


chrom: chr10
strand: +
right_annotated: ENSMUSG00000045455.8:Gm9797:transcribed_processed_pseudogene:613
samples:
,0:5071,1:3230,2:53935,3:41839,4:17747,5:24537,6:91736,7:20735,8:63311,9:69673,10:74118,11:154042,12:14639,13:20635,14:10341,15:4307,16:12263,17:11202,18:8872,19:6267


chrom: chr10
strand: -
right_annotated: ENSMUSG00000019820.11:Utrn:protein_coding:14267
samples:
,0:86304,1:55857,2:449043,3:286768,4:353849,5:625826,6:846706,7:106590,8:399981,9:191279,10:178750,11:237700,12:140764,13:33653,14:17799,15:3028,16:16931,17:14179,18:3106,19:399


chrom: chr10
strand: +
right_annotated: ENSMUSG00000112698.1:AC122734.1:processed_pseudogene:454
samples:
,0:130,1:43,2:697,3:50,4:423,5:313,6:1786,7:296,8:558,9:1155,10:487,11:382,12:50,14:1299,15:493,16:608,17:1270,18:736,19:1156


chrom: chr10
strand: +
right_annotated: ENSMUSG00000078348.4:Sf3b5:protein_coding:3841
samples:
,0:56988,1:40138,2:184701,3:130026,4:64122,5:99948,6:602957,7:113888,8:319618,9:309263,10:609765,11:312731,12:102903,13:84118,14:83282,15:47611,16:78871,17:87340,18:93158,19:74286


chrom: chr10
strand: +
right_annotated: ENSMUSG00000019817.18:Plagl1:protein_coding:5383
samples:
,0:18190,1:8349,2:815929,3:422574,4:114996,5:114186,6:306331,7:78697,8:79583,9:160907,10:87,11:947969,12:31830,13:90,14:19489,15:16809,16:14966,17:38386,18:10626,19:5397


chrom: chr10
strand: -
right_annotated: ENSMUSG00000019814.5:Ltv1:protein_coding:2297
samples:
,0:125913,1:81728,2:211969,3:103296,4:79408,5:147701,6:279578,7:45705,8:411523,9:68085,10:69429,11:290172,12:157584,13:69738,14:33291,15:20631,16:65205,17:91510,18:15927,19:30480


chrom: chr10
strand: -
right_annotated: ENSMUSG00000062866.16:Phactr2:protein_coding:9298
samples:
,0:48176,1:27133,2:612204,3:282909,4:302888,5:621316,6:2736268,7:321781,8:1481355,9:907804,10:485,11:4224,12:734975,13:124550,14:862,16:329,19:116


chrom: chr10
strand: +
right_annotated: ENSMUSG00000019810.15:Fuca2:protein_coding:5741
samples:
,0:81912,1:52779,2:171128,3:54698,4:166593,5:322141,6:1228476,7:107702,8:484613,9:188795,10:638489,11:873444,12:165106,13:236588,14:148833,15:60998,16:110290,17:111280,18:159496,19:91927


chrom: chr10
strand: -
right_annotated: ENSMUSG00000019809.16:Pex3:protein_coding:2234
samples:
,0:367612,1:232497,2:181983,3:80268,4:47492,5:79225,6:605739,7:117962,8:198497,9:139668,10:149944,11:295176,12:69499,13:75508,14:104772,15:52712,16:91499,17:40472,18:62263,19:71514


chrom: chr10
strand: +
right_annotated: ENSMUSG00000019808.8:Adat2:protein_coding:1466
samples:
,0:57981,1:39788,2:33328,3:28343,4:13070,5:14952,6:67597,7:13944,8:53034,9:16045,10:53721,11:71604,12:2516,13:18375,14:6307,15:2617,16:9122,17:8335,18:4297,19:6433


chrom: chr10
strand: -
right_annotated: ENSMUSG00000019806.13:Aig1:protein_coding:2115
samples:
,0:3827,1:2174,2:59136,3:15863,4:17270,5:22052,6:1111073,7:141751,8:374015,9:360462,10:577093,11:331577,12:202804,13:84797,14:170051,15:95322,16:203010,17:188327,18:114352,19:80171


chrom: chr10
strand: -
right_annotated: ENSMUSG00000098048.1:Gm8330:processed_pseudogene:1008
samples:
,0:623,1:642,2:1462,3:1247,4:430,5:835,6:5030,7:1062,8:3586,9:2726,10:2100,11:1490,12:430,13:690,14:536,15:1070,16:1542,17:1019,18:1218,19:793


chrom: chr10
strand: +
right_annotated: ENSMUSG00000015501.10:Hivep2:protein_coding:10372
samples:
,0:13535,1:8130,2:109164,3:47773,4:57105,5:85263,6:181412,7:23267,8:149492,9:73912,10:79902,11:20243,12:20214,13:27735,14:353539,15:393506,16:492114,17:393089,18:439011,19:304283


chrom: chr10
strand: -
right_annotated: ENSMUSG00000097300.1:Gm26835:lincRNA:3274
samples:
,0:87,1:72,2:559,3:324,4:271,5:512,6:43702,7:478,8:659,9:274,14:1005,15:6101,16:7793,17:1619,18:1994,19:2354


chrom: chr10
strand: -
right_annotated: ENSMUSG00000101014.1:Gm28289:antisense_RNA:315
samples:
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chrom: chr10
strand: -
right_annotated: ENSMUSG00000039116.5:Adgrg6:protein_coding:6591
samples:
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chrom: chr10
strand: +
right_annotated: ENSMUSG00000071532.6:Gm10335:processed_pseudogene:468
samples:
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chrom: chr10
strand: +
right_annotated: ENSMUSG00000111888.1:AC118202.1:antisense_RNA:1003
samples:
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chrom: chr10
strand: -
right_annotated: ENSMUSG00000019868.16:Vta1:protein_coding:1974
samples:
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chrom: chr10
strand: +
right_annotated: ENSMUSG00000085572.1:Gm16234:antisense_RNA:815
samples:
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chrom: chr10
strand: -
right_annotated: ENSMUSG00000093798.2:Gm8355:processed_pseudogene:1941
samples:
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chrom: chr10
strand: -
right_annotated: ENSMUSG00000112395.1:AC159139.1:processed_pseudogene:1074
samples:
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chrom: chr10
strand: +
right_annotated: ENSMUSG00000112903.1:AC153975.3:processed_pseudogene:839
samples:
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chrom: chr10
strand: +
right_annotated: ENSMUSG00000039910.10:Cited2:protein_coding:2457
samples:
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chrom: chr10
strand: +
right_annotated: ENSMUSG00000039891.6:Txlnb:protein_coding:4422
samples:
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chrom: chr10
strand: -
right_annotated: ENSMUSG00000039879.9:Heca:protein_coding:5098
samples:
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chrom: chr10
strand: -
right_annotated: ENSMUSG00000078453.3:Abracl:protein_coding:911
samples:
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chrom: chr10
strand: +
right_annotated: ENSMUSG00000091367.1:Gm17711:pseudogene:237
samples:
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chrom: chr10
strand: +
right_annotated: ENSMUSG00000019854.17:Reps1:protein_coding:2697
samples:
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chrom: chr10
strand: -
right_annotated: ENSMUSG00000059554.12:Ccdc28a:protein_coding:2844
samples:
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chrom: chr10
strand: +
right_annotated: ENSMUSG00000096977.2:Gm10827:lincRNA:2586
samples:
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chrom: chr10
strand: +
right_annotated: ENSMUSG00000039835.16:Nhsl1:protein_coding:7930
samples:
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chrom: chr10
strand: -
right_annotated: ENSMUSG00000019853.6:Hebp2:protein_coding:3930
samples:
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chrom: chr10
strand: -
right_annotated: ENSMUSG00000019852.7:Arfgef3:protein_coding:14579
samples:
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chrom: chr10
strand: +
right_annotated: ENSMUSG00000111474.1:AC158630.3:antisense_RNA:1749
samples:
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chrom: chr10
strand: +
right_annotated: ENSMUSG00000019851.8:Perp:protein_coding:1952
samples:
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chrom: chr10
strand: -
right_annotated: ENSMUSG00000019850.11:Tnfaip3:protein_coding:4595
samples:
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chrom: chr10
strand: +
right_annotated: ENSMUSG00000110770.1:AC158622.1:processed_pseudogene:774
samples:
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chrom: chr10
strand: +
right_annotated: ENSMUSG00000111606.1:AC161825.2:processed_pseudogene:950
samples:
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chrom: chr10
strand: +
right_annotated: ENSMUSG00000020009.12:Ifngr1:protein_coding:2112
samples:
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chrom: chr10
strand: -
right_annotated: ENSMUSG00000020003.16:Pex7:protein_coding:8099
samples:
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chrom: chr10
strand: +
right_annotated: ENSMUSG00000071369.11:Map3k5:protein_coding:5450
samples:
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chrom: chr10
strand: +
right_annotated: ENSMUSG00000019996.17:Map7:protein_coding:4981
samples:
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chrom: chr10
strand: +
right_annotated: ENSMUSG00000111356.1:AC158620.2:processed_pseudogene:399
samples:
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chrom: chr10
strand: -
right_annotated: ENSMUSG00000111447.1:AC153845.3:antisense_RNA:1165
samples:
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chrom: chr10
strand: -
right_annotated: ENSMUSG00000069713.2:4933406P04Rik:lincRNA:1789
samples:
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chrom: chr10
strand: +
right_annotated: ENSMUSG00000037608.16:Bclaf1:protein_coding:5454
samples:
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chrom: chr10
strand: -
right_annotated: ENSMUSG00000111351.1:AC153845.2:processed_pseudogene:428
samples:
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chrom: chr10
strand: -
right_annotated: ENSMUSG00000019990.15:Pde7b:protein_coding:4797
samples:
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chrom: chr10
strand: -
right_annotated: ENSMUSG00000092051.2:Gm17229:transcribed_processed_pseudogene:2817
samples:
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chrom: chr10
strand: +
right_annotated: ENSMUSG00000019986.17:Ahi1:protein_coding:5094
samples:
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chrom: chr10
strand: +
right_annotated: ENSMUSG00000098102.1:Gm2467:processed_pseudogene:1010
samples:
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chrom: chr10
strand: +
right_annotated: ENSMUSG00000019977.16:Hbs1l:protein_coding:4913
samples:
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chrom: chr10
strand: -
right_annotated: ENSMUSG00000112654.1:AC153557.3:antisense_RNA:1018
samples:
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chrom: chr10
strand: -
right_annotated: ENSMUSG00000112370.1:AC153557.1:processed_pseudogene:403
samples:
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chrom: chr10
strand: +
right_annotated: ENSMUSG00000019970.15:Sgk1:protein_coding:4054
samples:
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chrom: chr10
strand: -
right_annotated: ENSMUSG00000097086.1:Gm7672:processed_pseudogene:872
samples:
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chrom: chr10
strand: -
right_annotated: ENSMUSG00000097327.7:E030030I06Rik:protein_coding:2175
samples:
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chrom: chr10
strand: -
right_annotated: ENSMUSG00000044268.4:Gm4895:processed_pseudogene:1137
samples:
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chrom: chr10
strand: -
right_annotated: ENSMUSG00000097295.1:Hmgb1-ps8:processed_pseudogene:626
samples:
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chrom: chr10
strand: -
right_annotated: ENSMUSG00000097586.1:Gm26528:processed_pseudogene:283
samples:
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chrom: chr10
strand: +
right_annotated: ENSMUSG00000097245.1:Gm5421:processed_pseudogene:2354
samples:
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chrom: chr10
strand: -
right_annotated: ENSMUSG00000097473.1:Gm26585:processed_pseudogene:630
samples:
,0:50,1:91,2:456,3:294,4:74,5:147,6:2289,7:633,8:976,9:335,10:2943,11:1599,12:424,13:379,14:100,15:377,16:367,17:103,18:436,19:257


chrom: chr10
strand: +
right_annotated: ENSMUSG00000037490.5:Slc2a12:protein_coding:4167
samples:
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chrom: chr10
strand: -
right_annotated: ENSMUSG00000071359.13:Tbpl1:protein_coding:3029
samples:
,0:863395,1:577352,2:145016,3:80990,4:59003,5:111787,6:865158,7:120557,8:297809,9:245878,10:163180,11:1016756,12:245901,13:112640,14:78783,15:75524,16:152334,17:153327,18:126509,19:111368


chrom: chr10
strand: +
right_annotated: ENSMUSG00000112727.1:AC153369.2:processed_pseudogene:955
samples:
,0:350,1:300,2:7627,3:6822,4:2226,5:4966,6:36944,7:6438,8:14156,9:11773,10:13766,11:12412,12:3497,13:2747,14:24112,15:26338,16:44839,17:31946,18:43306,19:28738


chrom: chr10
strand: -
right_annotated: ENSMUSG00000010461.15:Eya4:protein_coding:5831
samples:
,0:263569,1:159199,2:21512,3:7843,4:7733,5:7065,6:3399683,7:797303,8:694609,9:586682,10:578231,11:1758946,12:157223,13:18676,15:513,16:83,17:334,18:187


chrom: chr10
strand: -
right_annotated: ENSMUSG00000061983.7:Rps12:protein_coding:644
samples:
,0:26852,1:17670,2:73761,3:49896,4:25843,5:34878,6:130758,7:27453,8:73353,9:78497,10:145836,11:71891,12:43684,13:21443,14:4928,15:1782,16:4349,17:1744,18:8073,19:2781


chrom: chr10
strand: -
right_annotated: ENSMUSG00000070063.1:Snora33:snoRNA:129
samples:
,0:48,1:41,2:3219,3:1757,4:891,5:2064,6:9618,7:1818,8:4090,9:2134,12:3770,15:182,16:692,18:652,19:33


chrom: chr10
strand: -
right_annotated: ENSMUSG00000080486.1:Snord100:snoRNA:74
samples:
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chrom: chr10
strand: +
right_annotated: ENSMUSG00000037455.16:Slc18b1:protein_coding:2843
samples:
,0:6364,1:5591,2:115291,3:40320,4:77677,5:154515,6:141050,7:24308,8:3047,9:34942,10:60901,12:1361,13:180,14:30232,15:18059,16:49594,17:21071,18:16993,19:21076


chrom: chr10
strand: +
right_annotated: ENSMUSG00000019998.6:Stx7:protein_coding:3763
samples:
,0:40054,1:21990,2:251817,3:134375,4:221452,5:381215,6:2425736,7:304863,8:684852,9:624717,10:711487,11:1204097,12:275710,13:250098,14:398327,15:212836,16:461363,17:407535,18:449670,19:246395


chrom: chr10
strand: +
right_annotated: ENSMUSG00000020000.7:Moxd1:protein_coding:3090
samples:
,0:6221,1:4037,2:200,3:1297,4:2592,5:1945,6:221880,7:55758,8:276045,9:112934,10:2582619,11:23966256,12:1586272,13:1023791,15:4563,17:118,18:1268


chrom: chr10
strand: -
right_annotated: ENSMUSG00000087400.8:Gm15270:processed_transcript:870
samples:
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chrom: chr10
strand: +
right_annotated: ENSMUSG00000019997.11:Ctgf:protein_coding:2774
samples:
,0:56412,1:42924,2:381341,3:83433,4:312788,5:342205,6:645475,7:66659,8:309856,9:166701,10:1911591,11:2408389,12:154642,13:26834,14:95097,15:186824,16:127212,17:86716,18:165514,19:47538


chrom: chr10
strand: -
right_annotated: ENSMUSG00000037370.13:Enpp1:protein_coding:6780
samples:
,0:6613,1:3676,2:127482,3:61656,4:137390,5:200308,6:10556,7:11197,8:1885,9:16730,10:868,11:20183,12:603,13:10605,15:199,17:118,18:945


chrom: chr10
strand: -
right_annotated: ENSMUSG00000019989.8:Enpp3:protein_coding:4994
samples:
,0:1378,1:600,2:29791,3:12793,4:7144,5:9262,6:60410,7:13308,8:6881,9:40416,11:7046,13:19384,14:414,15:84,16:91,17:590,18:961


chrom: chr10
strand: +
right_annotated: ENSMUSG00000019984.16:Med23:protein_coding:5098
samples:
,0:122525,1:63628,2:334689,3:242252,4:124426,5:228133,6:374162,7:60127,8:32897,9:120311,10:10125,11:744123,12:17386,13:129578,14:42814,15:68952,16:102626,17:18068,18:23197,19:21493


chrom: chr10
strand: +
right_annotated: ENSMUSG00000112597.1:AC153974.2:processed_pseudogene:1025
samples:
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chrom: chr10
strand: +
right_annotated: ENSMUSG00000093282.1:Gm22566:miRNA:85
samples:
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chrom: chr10
strand: -
right_annotated: ENSMUSG00000039166.16:Akap7:protein_coding:3856
samples:
,0:58797,1:34590,2:122920,3:81750,4:71144,5:158076,6:274950,7:63230,8:96329,9:45025,11:7196,14:271761,15:137882,16:264320,17:138714,18:126348,19:130417


chrom: chr10
strand: +
right_annotated: ENSMUSG00000019978.16:Epb41l2:protein_coding:7066
samples:
,0:900531,1:598980,2:1151360,3:513047,4:927190,5:1866464,6:302431,7:92287,8:262023,9:119192,10:73969,11:178587,12:38237,13:2181,14:944,15:2537,16:22087,17:11150,18:7695,19:2348


chrom: chr10
strand: +
right_annotated: ENSMUSG00000112269.1:AC153548.1:processed_pseudogene:569
samples:
,0:2661,1:1738,2:6373,3:3084,4:3183,5:7512,6:149,8:72,10:100,14:3456,15:3280,16:5383,17:2775,18:5506,19:1939


chrom: chr10
strand: +
right_annotated: ENSMUSG00000112324.1:AC153548.2:lincRNA:2661
samples:
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chrom: chr10
strand: -
right_annotated: ENSMUSG00000049420.9:Tmem200a:protein_coding:4115
samples:
,0:46065,1:26401,2:22459,3:28138,4:400,5:1150,6:203573,7:80344,8:119455,9:55927,10:162560,11:1105883,12:80027,13:828,16:7246,19:2500


chrom: chr10
strand: +
right_annotated: ENSMUSG00000112808.1:AC153546.1:processed_pseudogene:633
samples:
,0:134809,1:78496,2:193638,3:192874,4:38982,5:47911,6:262955,7:63754,8:251402,9:251410,10:408553,11:236262,12:43188,13:62761,15:50,17:1108,18:1005,19:1350


chrom: chr10
strand: -
right_annotated: ENSMUSG00000039089.15:L3mbtl3:protein_coding:4651
samples:
,0:14428,1:5839,2:190671,3:78735,4:91601,5:182164,6:657471,7:73385,8:116961,9:166247,10:226916,11:5832,12:6583,13:38962,14:16097,15:27622,16:15274,17:39959,18:17539,19:25834


chrom: chr10
strand: +
right_annotated: ENSMUSG00000039031.16:Arhgap18:protein_coding:3651
samples:
,0:34729,1:18479,2:457117,3:266355,4:214294,5:361768,6:150512,7:49541,8:122842,9:58728,10:90,11:65754,12:105329,15:44,18:1909,19:6133


chrom: chr10
strand: -
right_annotated: ENSMUSG00000019899.16:Lama2:protein_coding:9812
samples:
,0:89521,1:63974,2:192023,3:209686,4:284668,5:387698,6:25900,7:1434,9:45629,10:159796,11:37848,12:3713,13:353,14:50,15:372,16:7814,17:2309,18:6438,19:50


chrom: chr10
strand: +
right_annotated: ENSMUSG00000064208.6:Gm10145:processed_pseudogene:462
samples:
,0:45528,1:29696,2:43010,3:29620,4:16879,5:26681,6:120421,7:32820,8:85061,9:67561,10:122455,11:142848,12:18146,13:13318,14:11097,15:4691,16:12654,17:12639,18:22102,19:14258


chrom: chr10
strand: +
right_annotated: ENSMUSG00000019889.10:Ptprk:protein_coding:6219
samples:
,0:13945,1:10574,2:178979,3:116464,4:110255,5:143755,6:653558,7:69533,8:211971,9:101780,10:135721,11:561638,12:174360,13:176107,14:36829,15:6863,16:36147,17:52812,18:19897,19:2872


chrom: chr10
strand: -
right_annotated: ENSMUSG00000090126.1:4930519F09Rik:transcribed_processed_pseudogene:1396
samples:
,0:3697,1:1679,2:5387,3:2295,4:1479,5:1647,8:3692,9:208,10:178,11:408,14:3822,15:2193,16:3029,17:2600,18:4750,19:3706


chrom: chr10
strand: +
right_annotated: ENSMUSG00000095478.2:Gm9824:processed_pseudogene:561
samples:
,0:561205,1:387652,2:222954,3:189370,4:212216,5:317346,6:322343,7:44053,8:202785,9:175971,10:464819,11:235808,12:171922,13:65900,14:71003,15:49380,16:82024,17:81942,18:79743,19:60084


chrom: chr10
strand: +
right_annotated: ENSMUSG00000038916.7:Soga3:protein_coding:4105
samples:
,0:250,1:250,3:50,4:300,5:500,6:54297,7:5784,8:17317,9:711,14:191920,15:123563,16:213800,17:293833,18:240724,19:165302


chrom: chr10
strand: +
right_annotated: ENSMUSG00000110723.1:AC153912.1:protein_coding:724
samples:
,0:110,1:154,3:103,4:847,5:494,6:35059,7:3384,8:3094,9:666,14:24491,15:21367,16:30937,17:29187,18:32581,19:22603


chrom: chr10
strand: +
right_annotated: ENSMUSG00000004360.9:9330159F19Rik:protein_coding:5695
samples:
,0:980,1:460,2:530,3:1655,4:9347,5:6964,6:422616,7:29831,8:14854,9:27142,10:102,11:171,12:85,14:33185,15:35958,16:54405,17:41352,18:83001,19:61609


chrom: chr10
strand: -
right_annotated: ENSMUSG00000110830.1:AC153912.2:antisense_RNA:2586
samples:
,0:5310,1:3181,2:14666,3:5324,4:3938,5:5135,6:10491,7:7318,8:19366,9:29720,10:21293,11:6211,12:3837,13:789,14:3172,15:1712,16:9777,17:3372,18:1829,19:1258


chrom: chr10
strand: +
right_annotated: ENSMUSG00000019883.11:Echdc1:protein_coding:3988
samples:
,0:199173,1:128934,2:467522,3:212251,4:113940,5:170904,6:1092606,7:178053,8:580718,9:481897,10:394405,11:687795,12:218791,13:72220,14:237043,15:128819,16:168415,17:219268,18:314186,19:193450


chrom: chr10
strand: -
right_annotated: ENSMUSG00000038876.12:Rnf146:protein_coding:4456
samples:
,0:231368,1:149382,2:480055,3:245374,4:136067,5:209748,6:1163650,7:177143,8:499347,9:397937,10:276982,11:835451,12:262022,13:93371,14:285672,15:161283,16:195117,17:269787,18:418431,19:244399


chrom: chr10
strand: -
right_annotated: ENSMUSG00000111496.1:AC153912.4:TEC:2015
samples:
,0:3625,1:2462,2:20841,3:7712,4:5663,5:8895,6:28565,7:23485,8:25910,9:41188,12:111803,16:1200,17:211575,18:9257,19:3938


chrom: chr10
strand: +
right_annotated: ENSMUSG00000111090.1:AC153912.3:TEC:3198
samples:
,0:4100,1:3069,2:2988,3:1348,4:950,5:2595,6:887,7:916,8:38,9:5009,10:40,15:321,16:230,18:1600,19:250


chrom: chr10
strand: -
right_annotated: ENSMUSG00000019880.10:Rspo3:protein_coding:3085
samples:
,0:50,2:6939,3:14348,4:5468,5:3496,6:448712,7:91505,8:426919,9:58003,10:512825,11:181500,13:164,14:23483,15:24196,16:35873,17:62228,18:84629,19:46496


chrom: chr10
strand: +
right_annotated: ENSMUSG00000110831.1:AC158592.1:antisense_RNA:1113
samples:
,0:31,1:57,2:1141,3:2084,4:851,5:538,6:40294,7:8477,8:55056,9:9471,10:69413,11:4885,14:4464,15:6130,16:6883,17:7766,18:14203,19:9418


chrom: chr10
strand: -
right_annotated: ENSMUSG00000069682.6:Gm10275:transcribed_processed_pseudogene:635
samples:
,0:276895,1:168087,2:1920199,3:1438839,4:573692,5:612811,6:1169944,7:257779,8:703963,9:536890,10:2160432,11:897639,12:237648,13:184558,14:31058,15:23737,16:43952,17:19125,18:27148,19:24425


chrom: chr10
strand: +
right_annotated: ENSMUSG00000111427.1:AC166262.1:processed_pseudogene:589
samples:
,0:852,1:276,2:354,3:231,4:134,5:144,6:184,7:82,8:154,9:56,10:273,11:728,12:165,13:100,14:12209,15:6954,16:12914,17:8326,18:7263,19:5221


chrom: chr10
strand: +
right_annotated: ENSMUSG00000111554.1:AC159475.3:unprocessed_pseudogene:2559
samples:
,0:10670,1:6820,2:27204,3:13427,4:8827,5:15852,6:18007,7:721,8:8375,9:1753,10:37255,11:67009,12:900,14:29,15:5980,16:14309,17:7306,18:12870,19:7632


chrom: chr10
strand: -
right_annotated: ENSMUSG00000111001.1:AC159475.1:processed_pseudogene:1070
samples:
,0:558,1:563,2:1879,3:934,4:391,5:762,6:1729,7:222,8:1996,9:1283,10:936,11:1326,12:387,13:41,14:63412,15:35869,16:69128,17:73992,18:72549,19:62512


chrom: chr10
strand: -
right_annotated: ENSMUSG00000075266.5:Cenpw:protein_coding:4211
samples:
,0:76850,1:44166,2:43140,3:39454,4:9279,5:10020,6:82353,7:40059,8:73710,9:24972,10:18775,11:171932,12:180,13:9077,14:18825,15:10214,16:8323,17:12080,18:15947,19:9064


chrom: chr10
strand: +
right_annotated: ENSMUSG00000111047.1:AC156389.1:transcribed_processed_pseudogene:2644
samples:
,0:2756,1:2050,2:1794,3:1637,4:948,5:1003,6:329,7:111,8:127,9:260,10:116,11:586,12:131,14:750,15:897,16:1265,17:1800,18:1867,19:1350


chrom: chr10
strand: -
right_annotated: ENSMUSG00000019792.8:Trmt11:protein_coding:2359
samples:
,0:13179,1:6660,2:71865,3:41742,4:18249,5:32911,6:446902,7:71344,8:245903,9:153795,10:150361,11:469168,12:26257,14:17636,15:12970,16:16679,17:28474,18:18092,19:11343


chrom: chr10
strand: -
right_annotated: ENSMUSG00000111080.1:AC153899.1:lincRNA:3440
samples:
,0:8124,1:5645,2:120948,3:46017,4:52591,5:104162,6:3402892,7:710083,8:2027599,9:1127695,10:142531,11:1951542,12:78102,13:119143,14:63713,15:24727,16:53241,17:32148,18:17650,19:21916


chrom: chr10
strand: -
right_annotated: ENSMUSG00000019791.12:Hint3:protein_coding:875
samples:
,0:33772,1:18423,2:98860,3:36118,4:37049,5:59464,6:116645,7:25463,8:98900,9:63141,10:142569,11:26409,12:7084,13:5117,14:4300,15:2682,16:5743,17:9761,18:4982,19:3494


chrom: chr10
strand: -
right_annotated: ENSMUSG00000039697.16:Ncoa7:protein_coding:8668
samples:
,0:58643,1:39574,2:363140,3:194345,4:230645,5:453693,6:4116038,7:978787,8:3422024,9:2266803,10:3198715,11:7298733,12:77223,13:149871,14:92556,15:69559,16:160384,17:180507,18:178073,19:83081


chrom: chr10
strand: -
right_annotated: ENSMUSG00000111442.1:AC153971.2:TEC:777
samples:
,0:229,2:130,4:300,5:200,6:183531,7:12209,8:11901,9:5897,10:17,11:98425,12:54,13:27,14:15,15:1340,16:3614,17:774,18:2055,19:1611


chrom: chr10
strand: -
right_annotated: ENSMUSG00000110744.1:AC125532.1:processed_pseudogene:1415
samples:
,0:7688,1:3217,2:166754,3:128166,4:48921,5:74066,6:156107,7:24256,8:97003,9:92112,10:92581,11:147704,12:34685,13:33015,14:27341,15:17978,16:28331,17:33426,18:25418,19:26160


chrom: chr10
strand: -
right_annotated: ENSMUSG00000019789.9:Hey2:protein_coding:2550
samples:
,0:2878,1:1439,2:223501,3:188256,4:19149,5:21999,6:717963,7:146913,8:352834,9:347728,11:472269,12:9203,13:28469,15:2025


chrom: chr10
strand: +
right_annotated: ENSMUSG00000039684.9:Gm5422:transcribed_processed_pseudogene:3021
samples:
,0:300891,1:200184,2:247973,3:162637,4:101059,5:180044,6:135093,7:16576,8:77961,9:63477,10:121917,11:149696,12:39948,13:55238,14:150484,15:99790,16:189191,17:193856,18:262299,19:219332


chrom: chr10
strand: +
right_annotated: ENSMUSG00000000295.13:Hddc2:protein_coding:858
samples:
,0:13811,1:6434,2:89001,3:78137,4:39022,5:67223,6:616422,7:174566,8:364333,9:300307,10:921246,11:341432,12:154551,13:109054,14:11780,15:3913,16:16908,17:11693,18:20547,19:16557


chrom: chr10
strand: +
right_annotated: ENSMUSG00000111664.1:AC153969.1:TEC:2605
samples:
,0:326,1:300,2:6915,3:3240,4:3160,5:6811,6:35,7:2101,8:8368,9:890,10:20,11:15,12:10,13:17346,14:50,15:604,16:3291,18:1458


chrom: chr10
strand: -
right_annotated: ENSMUSG00000000296.8:Tpd52l1:protein_coding:1323
samples:
,0:42342,1:24235,2:148669,3:75333,4:123218,5:283506,6:153927,7:34069,8:94969,9:48902,10:522314,11:114481,12:75927,13:75359,14:45419,15:7899,16:20025,17:15382,18:22073,19:29245


chrom: chr10
strand: +
right_annotated: ENSMUSG00000111256.1:AC153729.4:antisense_RNA:781
samples:
,0:1570,1:991,2:7367,3:5179,4:2187,5:2992,6:3394,7:4685,8:2613,9:2050,10:3210,11:1557,12:479,13:319,14:2303,15:1566,16:2696,17:2155,18:2914,19:2022


chrom: chr10
strand: -
right_annotated: ENSMUSG00000110960.1:AC153729.2:processed_pseudogene:351
samples:
,0:16422,1:11216,2:76262,3:51215,4:21709,5:32579,6:194347,7:50115,8:130704,9:98564,10:179671,11:94810,12:28477,13:12600,14:30330,15:15592,16:32202,17:30375,18:30530,19:23595


chrom: chr10
strand: -
right_annotated: ENSMUSG00000063760.9:Rnf217:protein_coding:11013
samples:
,0:23842,1:15033,2:243524,3:112438,4:90731,5:191081,6:724466,7:146350,8:160153,9:171334,10:264262,11:543531,12:7455,13:1756,14:27419,15:12946,16:13032,17:21455,18:20391,19:15546


chrom: chr10
strand: -
right_annotated: ENSMUSG00000098068.1:Gm7909:processed_pseudogene:614
samples:
,0:381,2:3043,3:1901,4:550,5:1050,6:6605,7:3713,8:4305,9:153,10:254,11:211,12:33,13:86,14:350,15:217,16:250,17:237,18:214,19:418


chrom: chr10
strand: -
right_annotated: ENSMUSG00000069670.8:Nkain2:protein_coding:4441
samples:
,0:4702,1:1494,2:5536,3:5700,4:8843,5:30954,6:196852,7:30562,8:33966,9:30205,10:29277,11:38967,12:6,13:5,14:65741,15:32032,16:35676,17:69250,18:29471,19:40676


chrom: chr10
strand: -
right_annotated: ENSMUSG00000019785.14:Clvs2:protein_coding:7259
samples:
,0:1745,1:1149,2:10076,3:5235,4:2764,5:3628,6:2113,14:130707,15:76110,16:125627,17:137879,18:85432,19:52825


chrom: chr10
strand: +
right_annotated: ENSMUSG00000112656.1:AC107864.1:unprocessed_pseudogene:496
samples:
,0:3992,1:1792,2:4523,3:3044,4:1597,5:5401,6:1658,7:90,8:1060,9:779,11:2790,13:180,16:100,17:450,18:100,19:94


chrom: chr10
strand: -
right_annotated: ENSMUSG00000071343.2:Gm10327:processed_pseudogene:1002
samples:
,0:2760,1:1675,2:41484,3:32679,4:13698,5:23407,6:51382,7:8477,8:24908,9:19460,10:24877,11:20370,12:5730,13:3849,14:17904,15:15261,16:30967,17:21864,18:28627,19:23895


chrom: chr10
strand: +
right_annotated: ENSMUSG00000039552.14:Rsph4a:protein_coding:3650
samples:
,0:950,1:300,2:799,3:546,4:3371,5:1695,6:425958,7:43229,8:182031,9:55825,10:1175,11:566289,13:58220,17:7849,18:7697,19:472


chrom: chr10
strand: -
right_annotated: ENSMUSG00000039531.8:Zufsp:protein_coding:3262
samples:
,0:69415,1:43463,2:104248,3:52661,4:34241,5:62499,6:258460,7:93600,8:63819,9:318426,10:13627,11:329275,12:85949,13:15408,14:7382,15:5916,16:24893,18:11243,19:17954


chrom: chr10
strand: -
right_annotated: ENSMUSG00000112782.1:AC153962.4:processed_pseudogene:769
samples:
,0:87,2:448,3:99,4:87,5:150,6:1022,7:118,8:831,9:154,10:372,11:855,12:358,14:388,15:65,16:225,17:100,18:299,19:192


chrom: chr10
strand: -
right_annotated: ENSMUSG00000112280.1:AC153962.3:processed_transcript:1412
samples:
,0:683,1:59,2:4230,3:1615,4:1596,5:3187,6:32,7:6111,8:16649,9:5353,13:25,14:7662,15:636,16:8761,17:7535,18:8815,19:3827


chrom: chr10
strand: -
right_annotated: ENSMUSG00000019782.10:Rwdd1:protein_coding:1090
samples:
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chrom: chr10
strand: +
right_annotated: ENSMUSG00000111905.1:AC153962.1:antisense_RNA:1948
samples:
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chrom: chr10
strand: -
right_annotated: ENSMUSG00000049872.8:Fam26e:protein_coding:5323
samples:
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chrom: chr10
strand: -
right_annotated: ENSMUSG00000039497.8:Dse:protein_coding:4389
samples:
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chrom: chr10
strand: +
right_annotated: ENSMUSG00000047514.6:Tspyl1:protein_coding:3086
samples:
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chrom: chr10
strand: +
right_annotated: ENSMUSG00000110791.1:AC113059.1:TEC:3016
samples:
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chrom: chr10
strand: -
right_annotated: ENSMUSG00000097274.2:Gm26564:antisense_RNA:2777
samples:
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chrom: chr10
strand: +
right_annotated: ENSMUSG00000039485.8:Tspyl4:protein_coding:3879
samples:
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chrom: chr10
strand: -
right_annotated: ENSMUSG00000039480.14:Nt5dc1:protein_coding:3230
samples:
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chrom: chr10
strand: +
right_annotated: ENSMUSG00000019779.15:Frk:protein_coding:4852
samples:
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chrom: chr10
strand: +
right_annotated: ENSMUSG00000110935.1:AC138292.1:processed_pseudogene:565
samples:
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chrom: chr10
strand: -
right_annotated: ENSMUSG00000063953.3:Amd2:protein_coding:3218
samples:
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chrom: chr10
strand: +
right_annotated: ENSMUSG00000044499.11:Hs3st5:protein_coding:3091
samples:
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chrom: chr10
strand: +
right_annotated: ENSMUSG00000019777.16:Hdac2:protein_coding:4232
samples:
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chrom: chr10
strand: -
right_annotated: ENSMUSG00000069662.5:Marcks:protein_coding:4048
samples:
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chrom: chr10
strand: +
right_annotated: ENSMUSG00000019846.11:Lama4:protein_coding:6046
samples:
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chrom: chr10
strand: -
right_annotated: ENSMUSG00000051736.8:Fam229b:protein_coding:1044
samples:
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chrom: chr10
strand: +
right_annotated: ENSMUSG00000019845.8:Tube1:protein_coding:2929
samples:
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chrom: chr10
strand: +
right_annotated: ENSMUSG00000111877.1:AC129016.2:processed_pseudogene:764
samples:
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chrom: chr10
strand: +
right_annotated: ENSMUSG00000019843.14:Fyn:protein_coding:3838
samples:
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chrom: chr10
strand: +
right_annotated: ENSMUSG00000019842.6:Traf3ip2:protein_coding:2867
samples:
,0:12622,1:8107,2:93705,3:59840,4:39146,5:45747,6:151442,7:36678,8:91208,9:111114,11:2978,12:29185,13:180,15:1220,16:272,17:928,18:580,19:310


chrom: chr10
strand: -
right_annotated: ENSMUSG00000087177.7:E130307A14Rik:antisense_RNA:5599
samples:
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chrom: chr10
strand: +
right_annotated: ENSMUSG00000111847.1:AC160403.2:processed_pseudogene:1332
samples:
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chrom: chr10
strand: +
right_annotated: ENSMUSG00000019841.15:Rev3l:protein_coding:10713
samples:
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chrom: chr10
strand: -
right_annotated: ENSMUSG00000081608.1:Gm16210:processed_pseudogene:610
samples:
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chrom: chr10
strand: -
right_annotated: ENSMUSG00000096687.7:Mfsd4b4:protein_coding:3833
samples:
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chrom: chr10
strand: +
right_annotated: ENSMUSG00000097890.2:4930547M16Rik:bidirectional_promoter_lncRNA:2400
samples:
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chrom: chr10
strand: +
right_annotated: ENSMUSG00000111355.1:AC118733.1:processed_pseudogene:652
samples:
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chrom: chr10
strand: -
right_annotated: ENSMUSG00000038528.14:Mfsd4b5:protein_coding:5812
samples:
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chrom: chr10
strand: +
right_annotated: ENSMUSG00000096171.1:Gm8055:processed_pseudogene:1008
samples:
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chrom: chr10
strand: -
right_annotated: ENSMUSG00000019838.11:Slc16a10:protein_coding:6571
samples:
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chrom: chr10
strand: -
right_annotated: ENSMUSG00000111045.1:AC164625.1:lincRNA:3036
samples:
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chrom: chr10
strand: -
right_annotated: ENSMUSG00000038510.12:Rpf2:protein_coding:1887
samples:
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chrom: chr10
strand: -
right_annotated: ENSMUSG00000019837.8:Gtf3c6:protein_coding:2534
samples:
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chrom: chr10
strand: -
right_annotated: ENSMUSG00000075232.5:Amd1:protein_coding:3204
samples:
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chrom: chr10
strand: +
right_annotated: ENSMUSG00000111788.1:AC142273.2:processed_pseudogene:370
samples:
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chrom: chr10
strand: -
right_annotated: ENSMUSG00000038491.9:Cdk19os:antisense_RNA:1124
samples:
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chrom: chr10
strand: +
right_annotated: ENSMUSG00000038481.13:Cdk19:protein_coding:5807
samples:
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chrom: chr10
strand: +
right_annotated: ENSMUSG00000111251.1:AC157652.2:processed_pseudogene:683
samples:
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chrom: chr10
strand: -
right_annotated: ENSMUSG00000111108.1:AC157652.1:processed_pseudogene:757
samples:
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chrom: chr10
strand: +
right_annotated: ENSMUSG00000063428.8:Ddo:protein_coding:6158
samples:
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chrom: chr10
strand: +
right_annotated: ENSMUSG00000045555.3:Mettl24:protein_coding:1529
samples:
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chrom: chr10
strand: -
right_annotated: ENSMUSG00000038446.8:Cdc40:protein_coding:3534
samples:
,0:62184,1:35024,2:292324,3:164781,4:145267,5:273812,6:652028,7:149266,8:359429,9:230061,10:266683,11:457545,12:150361,13:76724,14:39599,15:40670,16:73592,17:52170,18:100230,19:74432


chrom: chr10
strand: +
right_annotated: ENSMUSG00000019831.14:Wasf1:protein_coding:2854
samples:
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chrom: chr10
strand: -
right_annotated: ENSMUSG00000038417.4:Fig4:protein_coding:3282
samples:
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chrom: chr10
strand: +
right_annotated: ENSMUSG00000091415.5:Ak9:protein_coding:6968
samples:
,0:371382,1:262387,2:3239,3:2954,4:3487,5:2916,6:68423,7:28725,8:32705,9:32444,10:270,11:138,12:9717,14:811,15:389,16:30,17:243,18:874,19:1550


chrom: chr10
strand: -
right_annotated: ENSMUSG00000111601.1:AC122332.3:processed_pseudogene:1986
samples:
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chrom: chr10
strand: +
right_annotated: ENSMUSG00000019826.11:Zbtb24:protein_coding:4260
samples:
,0:35860,1:24352,2:110638,3:65656,4:49350,5:76917,6:286750,7:18957,8:71453,9:16504,11:14196,12:69621,14:26434,15:17492,16:54928,17:20858,18:59479,19:32501


chrom: chr10
strand: +
right_annotated: ENSMUSG00000019823.17:Mical1:protein_coding:3569
samples:
,0:2029,1:1379,2:130162,3:49922,4:39206,5:43603,6:533,8:13286,9:1789,10:15254,11:228704,12:207594,16:6891


chrom: chr10
strand: -
right_annotated: ENSMUSG00000019822.12:Smpd2:protein_coding:1602
samples:
,0:18671,1:11836,2:218242,3:101381,4:46669,5:74245,6:455213,7:67071,8:341783,9:336946,10:1841,11:379443,12:88092,13:64440,14:8350,16:24391,17:12285,18:18889,19:6377


chrom: chr10
strand: +
right_annotated: ENSMUSG00000078451.5:Ppil6:protein_coding:1068
samples:
,0:119405,1:80640,2:5823,3:1965,4:3541,5:2930,6:287376,7:69775,8:121908,9:77736,10:149434,11:21764,12:25470,13:42539,14:6535,15:2818,16:662,17:5198,18:11203,19:2605


chrom: chr10
strand: +
right_annotated: ENSMUSG00000019818.15:Cd164:protein_coding:2922
samples:
,0:672293,1:429394,2:1386071,3:802664,4:1186121,5:2200327,6:3615913,7:807190,8:1570141,9:1811915,10:2715954,11:4462575,12:483464,13:418212,14:169215,15:86793,16:120362,17:213497,18:209421,19:138296


chrom: chr10
strand: -
right_annotated: ENSMUSG00000075225.14:Ccdc162:protein_coding:7481
samples:
,0:4338,1:1711,2:3563,3:1253,4:8751,5:10234,6:92884,7:6491,8:246,9:587,14:449,15:50,16:64,18:333,19:840


chrom: chr10
strand: -
right_annotated: ENSMUSG00000019813.16:Cep57l1:protein_coding:2400
samples:
,0:201559,1:131187,2:94678,3:52394,4:34230,5:57214,6:141619,7:32962,8:39265,9:33897,12:46501,13:9519,14:21537,15:5417,16:16317,17:13169,18:27884,19:13216


chrom: chr10
strand: +
right_annotated: ENSMUSG00000102114.2:BC048559:antisense_RNA:3561
samples:
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chrom: chr10
strand: +
right_annotated: ENSMUSG00000038332.13:Sesn1:protein_coding:3966
samples:
,0:88147,1:50733,2:412816,3:179737,4:318859,5:557347,6:111367,7:26372,8:79872,9:107769,10:142422,13:7402,14:155464,15:103196,16:184420,17:184231,18:454491,19:202724


chrom: chr10
strand: -
right_annotated: ENSMUSG00000071324.11:Armc2:protein_coding:5441
samples:
,0:188564,1:135270,2:7924,3:6963,4:12454,5:28424,6:111076,7:14664,8:16996,9:10521,10:43,11:64324,13:4096,14:11003,15:3688,16:15408,17:5069,18:5126,19:6526


chrom: chr10
strand: +
right_annotated: ENSMUSG00000111103.1:AC165442.1:bidirectional_promoter_lncRNA:249
samples:
,0:32726,1:23541,2:409,3:515,4:526,5:701,6:14558,7:2284,8:11318,9:2778,11:2007,14:422,16:177,17:104,19:377


chrom: chr10
strand: -
right_annotated: ENSMUSG00000085666.3:Gm9855:processed_pseudogene:1194
samples:
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chrom: chr10
strand: -
right_annotated: ENSMUSG00000048756.11:Foxo3:protein_coding:7405
samples:
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chrom: chr10
strand: -
right_annotated: ENSMUSG00000038302.14:Afg1l:protein_coding:2513
samples:
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chrom: chr10
strand: +
right_annotated: ENSMUSG00000083429.2:Gm15198:processed_pseudogene:177
samples:
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chrom: chr10
strand: +
right_annotated: ENSMUSG00000019804.12:Snx3:protein_coding:1413
samples:
,0:426209,1:273837,2:561102,3:270189,4:263159,5:455632,6:2057398,7:295179,8:955349,9:754065,10:1960868,11:1781216,12:408171,13:143769,14:356184,15:272515,16:417688,17:435864,18:404889,19:285472


chrom: chr10
strand: +
right_annotated: ENSMUSG00000038280.12:Ostm1:protein_coding:3229
samples:
,0:30227,1:14850,2:260886,3:94800,4:75402,5:128813,6:455461,7:73516,8:163250,9:203006,10:62646,11:721387,12:72760,13:16455,14:137415,15:119167,16:285618,17:206171,18:284133,19:224385


chrom: chr10
strand: -
right_annotated: ENSMUSG00000086434.1:Gm15200:antisense_RNA:410
samples:
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chrom: chr10
strand: +
right_annotated: ENSMUSG00000019802.13:Sec63:protein_coding:6032
samples:
,0:233415,1:144980,2:561886,3:305272,4:311169,5:528356,6:1071339,7:161828,8:277202,9:288699,10:888077,11:624477,12:7958,13:117374,14:59465,15:53142,16:82806,17:65203,18:79904,19:54715


chrom: chr10
strand: -
right_annotated: ENSMUSG00000097008.1:Gm26860:lincRNA:1489
samples:
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chrom: chr10
strand: +
right_annotated: ENSMUSG00000044770.14:Scml4:protein_coding:5106
samples:
,0:6187,1:3270,2:6915,3:3648,4:3089,5:3842,6:2678,9:5148,13:90,14:773,15:6750,16:608,17:25803,18:13063,19:85


chrom: chr10
strand: -
right_annotated: ENSMUSG00000111293.1:AC125206.2:antisense_RNA:2156
samples:
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chrom: chr10
strand: -
right_annotated: ENSMUSG00000038248.8:Sobp:protein_coding:4980
samples:
,0:23872,1:15521,2:86625,3:36901,4:74296,5:194310,6:564584,7:83791,8:125287,9:86992,10:241159,11:483861,12:11092,13:2596,14:17180,15:31053,16:33820,17:26269,18:39894,19:27055


chrom: chr10
strand: +
right_annotated: ENSMUSG00000045008.1:9030612E09Rik:protein_coding:1859
samples:
,0:876,1:898,2:6936,3:2814,4:2862,5:7866,6:57579,7:20875,8:39100,9:1525,10:54453,11:47832,12:190,13:142,16:33,18:3002,19:2200


chrom: chr10
strand: +
right_annotated: ENSMUSG00000038240.13:Pdss2:protein_coding:2385
samples:
,0:13831,1:7076,2:45126,3:29116,4:16792,5:31210,6:112957,7:16385,8:23231,9:61693,10:47084,11:119926,12:3480,14:12710,15:22660,16:60326,17:40586,18:13202,19:21827


chrom: chr10
strand: +
right_annotated: ENSMUSG00000110772.1:AC152922.1:TEC:1232
samples:
,0:265,1:303,2:1253,3:486,4:357,5:935,6:3918,7:841,8:236,9:622,10:1111,14:141,15:1224,16:1017,17:743,18:278,19:307


chrom: chr10
strand: -
right_annotated: ENSMUSG00000094955.2:Gm3699:processed_pseudogene:75
samples:
,0:43374,1:23408,2:146916,3:128638,4:40285,5:50819,6:192207,7:110053,8:131289,9:105393,10:360297,11:125053,12:31740,13:19471,14:3631,15:2110,16:4692,17:2233,18:3203,19:2189


chrom: chr10
strand: +
right_annotated: ENSMUSG00000038214.15:Bend3:protein_coding:6337
samples:
,0:36871,1:24141,2:71346,3:41663,4:21381,5:43611,6:183385,7:25717,8:60073,9:68763,10:178821,11:110896,12:329,13:2395,15:1432,16:150,17:4208,19:2343


chrom: chr10
strand: +
right_annotated: ENSMUSG00000045886.7:Gm9803:protein_coding:563
samples:
,0:186765,1:118908,2:89153,3:50909,4:21574,5:39254,6:284971,7:65235,8:181349,9:121030,10:278376,11:143039,12:51425,13:48720,14:46169,15:41254,16:61342,17:59758,18:46486,19:39090


chrom: chr10
strand: -
right_annotated: ENSMUSG00000019797.11:1700021F05Rik:protein_coding:860
samples:
,0:48002,1:32839,2:106664,3:72295,4:25773,5:44819,6:202264,7:29404,8:180732,9:81486,10:110308,11:122439,12:23918,13:39636,14:37912,15:17698,16:55645,17:33121,18:65243,19:45100


chrom: chr10
strand: +
right_annotated: ENSMUSG00000047139.9:Cd24a:protein_coding:2035
samples:
,0:13206,1:7763,2:60124,3:36144,4:35720,5:30619,6:9907738,7:2070472,8:4138852,9:3233877,10:10377657,11:13155707,12:562190,13:437281,14:105920,15:14802,16:48765,17:74957,18:7097,19:9249


chrom: chr10
strand: +
right_annotated: ENSMUSG00000094852.3:Gm9034:processed_pseudogene:1005
samples:
,0:49,1:190,2:1363,3:1191,4:242,5:755,6:2826,7:417,8:597,9:563,10:683,11:693,12:261,14:7223,15:492,16:1407,17:535,18:5451,19:891


chrom: chr10
strand: -
right_annotated: ENSMUSG00000019863.7:Qrsl1:protein_coding:1981
samples:
,0:38642,1:26714,2:53108,3:28887,4:16040,5:22581,6:90345,7:20569,8:112563,9:85576,11:131328,12:65337,13:30002,14:25617,15:28619,16:62443,17:39050,18:47220,19:20525


chrom: chr10
strand: +
right_annotated: ENSMUSG00000019864.14:Rtn4ip1:protein_coding:3135
samples:
,0:21787,1:15029,2:85471,3:33227,4:24163,5:48173,6:174601,7:11278,8:86538,9:86962,11:479286,13:71449,14:54938,15:28989,16:28601,17:42999,18:24412,19:16885


chrom: chr10
strand: -
right_annotated: ENSMUSG00000019866.14:Crybg1:protein_coding:7525
samples:
,0:16953,1:10615,2:25054,3:8952,4:5770,5:7545,6:233620,7:58420,8:143731,9:52365,12:25430,14:271,15:621,17:415,19:701


chrom: chr10
strand: -
right_annotated: ENSMUSG00000111224.1:AC153863.2:processed_pseudogene:778
samples:
,0:20833,1:13500,2:4365,3:2775,4:2394,5:3033,6:620,7:90,9:180,12:1893,14:1450,15:1048,16:809,17:1682,18:1484,19:1130


chrom: chr10
strand: +
right_annotated: ENSMUSG00000091358.2:Speer5-ps1:transcribed_processed_pseudogene:8546
samples:
,0:45799,1:28151,2:38744,3:18140,4:7889,5:12540,6:675,7:1391,8:2562,10:2,12:328,14:533,15:100,17:300,18:670,19:380


chrom: chr10
strand: +
right_annotated: ENSMUSG00000038160.7:Atg5:protein_coding:2352
samples:
,0:21134,1:13676,2:278521,3:149198,4:77548,5:117657,6:706584,7:94443,8:324977,9:343474,10:604091,11:1285523,12:2226,13:109816,14:85073,15:26814,16:77418,17:91540,18:114621,19:51415


chrom: chr10
strand: -
right_annotated: ENSMUSG00000111868.1:AC156273.3:lincRNA:2762
samples:
,0:17285,1:10009,2:154105,3:128519,4:39917,5:38708,6:41578,7:11362,8:25937,9:20062,10:50140,11:18121,12:6291,13:3149,14:1724,15:1288,16:2869,17:1844,18:2969,19:2389


chrom: chr10
strand: +
right_annotated: ENSMUSG00000111671.1:AC156273.2:processed_pseudogene:628
samples:
,0:13369,1:6860,2:147454,3:122959,4:38301,5:37066,6:36570,7:9541,8:22066,9:17362,10:43185,11:15085,12:5565,13:2574,14:1595,15:1106,16:2263,17:1687,18:2545,19:2103


chrom: chr10
strand: +
right_annotated: ENSMUSG00000095168.1:Gm4795:processed_pseudogene:1008
samples:
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chrom: chr10
strand: +
right_annotated: ENSMUSG00000019849.11:Prep:protein_coding:10933
samples:
,0:40592,1:24528,2:342171,3:203900,4:233626,5:418563,6:383896,7:46928,8:148539,9:161522,10:282024,11:137875,12:148658,13:11127,14:165501,15:90958,16:68275,17:147740,18:107175,19:68028


chrom: chr10
strand: -
right_annotated: ENSMUSG00000063804.8:Lin28b:protein_coding:5402
samples:
,0:24448,1:14602,2:2027,3:2153,4:700,5:720,6:2097,7:2592,10:29518,11:95620,12:90,13:102516,14:2189,15:4797,17:198,18:917,19:1808


chrom: chr10
strand: +
right_annotated: ENSMUSG00000038822.15:Hace1:protein_coding:3785
samples:
,0:59780,1:34508,2:98897,3:51850,4:32890,5:51006,6:99202,7:26182,8:11029,9:65431,10:168476,11:116339,14:156579,15:53661,16:76983,17:235543,18:100372,19:100384


chrom: chr10
strand: +
right_annotated: ENSMUSG00000110841.1:AC153368.1:transcribed_processed_pseudogene:796
samples:
,0:1756217,1:1220581,2:1038359,3:565316,4:276213,5:356905,6:3484974,7:740359,8:1943159,9:1533441,10:1529975,11:689939,12:427147,13:303967,14:249526,15:168554,16:374226,17:298599,18:392135,19:261041


chrom: chr10
strand: -
right_annotated: ENSMUSG00000056073.16:Grik2:protein_coding:10374
samples:
,0:25814,1:16038,2:1545,3:1896,4:750,5:1744,6:21801,7:1506,8:57714,9:930,11:82602,14:43355,15:51218,16:65665,17:48067,18:64995,19:64492


chrom: chr10
strand: +
right_annotated: ENSMUSG00000112667.1:AC153532.3:processed_pseudogene:3848
samples:
,0:49,1:100,2:50,3:50,5:100,6:657,7:360,8:180,9:360,10:205,11:450,14:160,15:200,16:350,17:150,18:100


chrom: chr10
strand: -
right_annotated: ENSMUSG00000110779.1:AC116726.1:TEC:3497
samples:
,0:297,1:300,2:463,3:150,4:250,5:528,6:1254,7:513,8:180,9:540,10:136,11:683,12:169,13:90,14:250,15:262,16:350,17:50,18:700,19:50


chrom: chr10
strand: -
right_annotated: ENSMUSG00000110896.1:AC116726.2:TEC:986
samples:
,0:100,1:100,2:4187,3:3638,4:1152,5:2694,6:518,8:157,9:180,10:180,11:234,14:249,15:50,16:150,17:50,18:255,19:48


chrom: chr10
strand: -
right_annotated: ENSMUSG00000110720.1:AC153954.1:processed_pseudogene:675
samples:
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chrom: chr10
strand: -
right_annotated: ENSMUSG00000111202.1:AC153954.3:lincRNA:287
samples:
,0:492,1:241,2:954,3:155,4:150,5:651,6:2603,8:255,9:652,12:90,14:214,15:198,16:374,17:199,18:222,19:410


chrom: chr10
strand: +
right_annotated: ENSMUSG00000038774.9:Ascc3:protein_coding:8425
samples:
,0:272822,1:173640,2:372763,3:153164,4:86194,5:135843,6:627484,7:112152,8:139380,9:249608,10:427155,11:448267,12:3220,14:18130,15:24592,16:19993,17:56111,18:17826,19:8785


chrom: chr10
strand: +
right_annotated: ENSMUSG00000111880.1:AC153952.1:processed_pseudogene:800
samples:
,0:1177,1:539,2:7695,3:5192,4:2126,5:2210,6:5487,7:396,8:3161,9:1748,10:2806,11:1997,12:435,13:544,14:468,15:113,16:350,17:480,18:400,19:466


chrom: chr10
strand: -
right_annotated: ENSMUSG00000112557.1:AC153950.1:processed_pseudogene:3238
samples:
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chrom: chr10
strand: +
right_annotated: ENSMUSG00000019891.15:Dcbld1:protein_coding:3026
samples:
,0:13835,1:8263,2:52249,3:23688,4:55787,5:143645,6:666369,7:110698,8:437566,9:227520,10:616,11:312558,12:86073,13:72060,14:77654,15:38217,16:64022,17:82505,18:66579,19:53421


chrom: chr10
strand: -
right_annotated: ENSMUSG00000019861.15:Gopc:protein_coding:4317
samples:
,0:94198,1:62476,2:176372,3:80086,4:64598,5:109188,6:771864,7:131109,8:188947,9:73860,10:3126,11:456277,12:31419,13:10332,14:102492,15:39669,16:125464,17:106439,18:91465,19:95610


chrom: chr10
strand: -
right_annotated: ENSMUSG00000112550.1:AC153525.1:processed_pseudogene:2386
samples:
,0:166951,1:105930,2:187524,3:129663,4:56156,5:87944,6:45530,7:6154,8:22564,9:12897,10:22109,11:21051,12:46429,13:7496,14:68526,15:33582,16:61930,17:87218,18:118735,19:71152


chrom: chr10
strand: +
right_annotated: ENSMUSG00000097704.1:Gm26741:protein_coding:87
samples:
,0:2675,1:1991,2:4407,3:1794,4:2076,5:2956,6:534,7:148,8:683,9:943,11:5973,14:1991,15:1059,16:3399,17:2196,18:1281,19:1906


chrom: chr10
strand: -
right_annotated: ENSMUSG00000089800.1:Rps19-ps10:processed_pseudogene:435
samples:
,0:175,1:277,2:2376,3:2241,4:450,5:1236,6:4591,7:1261,8:2556,9:3990,10:6505,11:1872,12:912,13:449,14:50,15:147,16:100,17:150,18:50


chrom: chr10
strand: +
right_annotated: ENSMUSG00000023068.16:Nus1:protein_coding:4605
samples:
,0:120041,1:75583,2:463378,3:238044,4:191600,5:374549,6:777800,7:165572,8:454689,9:144816,10:89135,11:752904,12:10831,13:73601,14:59886,15:48075,16:82460,17:73404,18:68375,19:34497


chrom: chr10
strand: -
right_annotated: ENSMUSG00000049576.6:Zfa-ps:transcribed_processed_pseudogene:3420
samples:
,0:39808,1:22839,2:21765,3:11273,4:12198,5:22976,6:13147,7:982,8:13889,9:9088,10:70,11:20611,12:90,13:1777,14:957,15:3722,16:4850,17:6650,18:2850,19:3181


chrom: chr10
strand: +
right_annotated: ENSMUSG00000038602.7:Slc35f1:protein_coding:4941
samples:
,0:593,1:100,2:17362,3:23323,4:1848,5:2546,6:108325,7:17715,8:37180,9:34781,10:47747,11:27785,12:108944,13:7791,14:631567,15:376309,16:560395,17:591693,18:550560,19:371693


chrom: chr10
strand: -
right_annotated: ENSMUSG00000038594.9:Cep85l:protein_coding:7703
samples:
,0:1011428,1:662844,2:117700,3:59176,4:33242,5:58097,6:306326,7:87875,8:102340,9:27636,10:282458,11:87764,12:36571,14:14256,15:20862,16:50768,17:15407,18:19394,19:19742


chrom: chr10
strand: -
right_annotated: ENSMUSG00000112239.1:AC153524.3:processed_pseudogene:1006
samples:
,0:6274,1:3823,2:75033,3:50041,4:24709,5:39257,6:27142,7:3517,8:12329,9:7132,10:10224,11:88669,12:2129,13:2550,14:30962,15:16749,16:23599,17:29718,18:23244,19:22497


chrom: chr10
strand: +
right_annotated: ENSMUSG00000038583.13:Pln:protein_coding:2759
samples:
,0:49999,1:33212,2:10724,3:19286,4:1996,5:1734,6:87771,7:6528,8:24633,9:11774,11:68471,14:48,15:1246,16:1395,17:1361,18:3979,19:112


chrom: chr10
strand: -
right_annotated: ENSMUSG00000112734.1:AC153524.4:sense_intronic:2708
samples:
,0:47191,1:30099,2:8185,3:14806,4:1253,5:1080,6:114389,7:21666,8:54677,9:22968,10:1,11:69864,12:7,13:11,14:122,15:1147,16:1120,17:1283,18:2539,19:1091


chrom: chr10
strand: +
right_annotated: ENSMUSG00000111892.1:AC153524.1:TEC:1935
samples:
,0:4783,1:2773,2:2769,3:1680,4:446,5:1639,6:281,7:120,10:7743,11:81,12:379,14:474,15:1048,16:1640,17:1788,18:347,19:1089


chrom: chr10
strand: +
right_annotated: ENSMUSG00000056219.7:Tmem229b-ps:processed_pseudogene:506
samples:
,0:563,1:96,2:4024,3:2296,4:1681,5:6234,6:83,8:240,12:1240,13:2042,14:1549,15:889,16:1904,17:1123,18:1522,19:1022


chrom: chr10
strand: -
right_annotated: ENSMUSG00000058298.8:Mcm9:protein_coding:8270
samples:
,0:74823,1:52035,2:160218,3:103341,4:76472,5:137155,6:245657,7:44616,8:72079,9:74492,10:30500,11:175340,12:43203,13:867,14:14576,15:9551,16:12615,17:22272,18:18300,19:11378


chrom: chr10
strand: +
right_annotated: ENSMUSG00000112530.1:AC155941.2:antisense_RNA:1861
samples:
,0:100,1:148,2:250,3:74,4:200,5:250,6:1821,7:360,8:402,10:373,11:1240,12:270,13:252,14:50,15:439,16:326,17:100,18:350,19:50


chrom: chr10
strand: -
right_annotated: ENSMUSG00000112731.1:AC155941.4:sense_intronic:2705
samples:
,0:196,1:198,2:350,3:350,4:450,5:400,6:1576,7:286,10:46,11:140,12:272,13:90,14:200,15:250,16:450,17:50,18:429,19:50


chrom: chr10
strand: +
right_annotated: ENSMUSG00000019857.7:Asf1a:protein_coding:2634
samples:
,0:77568,1:44121,2:212109,3:122612,4:73907,5:131899,6:225995,7:59029,8:137457,9:51603,10:104193,11:74459,12:76413,13:2116,14:37225,15:9278,16:24192,17:32230,18:27084,19:13213


chrom: chr10
strand: -
right_annotated: ENSMUSG00000019856.14:Fam184a:protein_coding:4258
samples:
,0:354768,1:232303,2:25412,3:21493,4:13605,5:13488,6:255588,7:48221,8:129744,9:56455,10:29385,11:797920,13:62,15:3311,16:6075,17:22761,18:11661,19:9207


chrom: chr10
strand: -
right_annotated: ENSMUSG00000003746.16:Man1a:protein_coding:5159
samples:
,0:4797,1:2397,2:193413,3:146614,4:94536,5:96563,6:174452,7:54895,8:23839,9:15340,10:357929,11:1505752,12:299,13:82113,14:3399,15:4435,16:18780,17:1115,18:6628,19:1698


chrom: chr10
strand: +
right_annotated: ENSMUSG00000112575.1:AC153947.1:processed_pseudogene:375
samples:
,0:1503,1:948,2:4484,3:2344,4:947,5:1347,6:450,7:108,8:84,9:301,10:170,11:36,14:100,15:398,16:1192,17:1335,18:182,19:650


chrom: chr10
strand: +
right_annotated: ENSMUSG00000112755.1:AC153947.2:processed_pseudogene:427
samples:
,0:176,1:50,2:533,3:411,4:526,5:297,6:392,7:80,8:385,9:604,10:233,11:596,13:88,14:79,15:303,16:453,17:132,18:341,19:139


chrom: chr10
strand: -
right_annotated: ENSMUSG00000038122.9:Tbc1d32:protein_coding:7240
samples:
,0:61304,1:37789,2:118621,3:62366,4:70843,5:146856,6:270799,7:50907,8:51334,9:84116,10:11355,11:114625,12:5560,13:30323,14:40175,15:17805,16:33378,17:15550,18:22953,19:14512


chrom: chr10
strand: +
right_annotated: ENSMUSG00000047669.8:Msl3l2:protein_coding:2140
samples:
,0:252458,1:173268,2:39857,3:19411,4:18023,5:25065,6:46888,7:5045,8:23628,9:24678,11:82436,14:1651,15:8198,16:9300,18:10335,19:10680


chrom: chr10
strand: -
right_annotated: ENSMUSG00000071303.4:Rps8-ps1:processed_pseudogene:624
samples:
,0:20093,1:13148,2:253710,3:178419,4:56501,5:67859,6:137294,7:29709,8:80561,9:64318,10:159326,11:59695,12:20972,13:11019,14:4433,15:3123,16:4893,17:3543,18:5612,19:4606


chrom: chr10
strand: +
right_annotated: ENSMUSG00000050953.10:Gja1:protein_coding:3371
samples:
,0:163943,1:110856,2:14661004,3:7741134,4:983386,5:1953561,6:195433,7:43351,8:46769,9:106091,10:227915,11:562689


chrom: chr10
strand: +
right_annotated: ENSMUSG00000112825.1:AC152949.2:processed_pseudogene:754
samples:
,0:164550,1:88618,2:710712,3:480375,4:162266,5:216813,6:785584,7:194730,8:504213,9:320837,10:1077147,11:742484,12:137446,13:81986,14:37004,15:25743,16:49305,17:28943,18:37951,19:41429


chrom: chr10
strand: +
right_annotated: ENSMUSG00000045048.7:Gm9795:processed_pseudogene:693
samples:
,0:1022015,1:662097,2:6602,3:3111,4:1470,5:4157,6:7941,7:1969,8:11052,9:5437,14:2150,15:1284,16:221,17:1120,18:1511,19:1005


chrom: chr10
strand: +
right_annotated: ENSMUSG00000019878.8:Hsf2:protein_coding:2730
samples:
,0:190898,1:125467,2:129053,3:83627,4:35569,5:66225,6:1218855,7:144161,8:224378,9:276959,10:106283,11:61209,12:47683,13:70638,14:31775,15:16585,16:17465,17:12121,18:41978,19:27377


